RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: 3.2.0-1418-omap4 #25-Ubuntu SMP PREEMPT Fri Aug 31 18:41:31 UTC 2012 armv7l Buildd toolchain package versions: launchpad-buildd_114-0~53~0.IS.08.04 python-lpbuildd_114-0~53~0.IS.08.04 bzr_2.5.1-0ubuntu2. Syncing the system clock with the buildd NTP service... 14 Sep 11:16:53 ntpdate[7058]: adjust time server 10.211.37.1 offset -0.001630 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '43894079033f0064ff0628de4b57f9bb9357af62', '/home/buildd/filecache-default/9aaef0c15f438994f53976d863cfc99044857a9f'] Unpacking chroot for build 43894079033f0064ff0628de4b57f9bb9357af62 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '43894079033f0064ff0628de4b57f9bb9357af62'] Mounting chroot for build 43894079033f0064ff0628de4b57f9bb9357af62 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '43894079033f0064ff0628de4b57f9bb9357af62', 'deb http://ftpmaster.internal/ubuntu quantal main universe'] Overriding sources.list in build-43894079033f0064ff0628de4b57f9bb9357af62 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '43894079033f0064ff0628de4b57f9bb9357af62', 'armel'] Updating debian chroot for build 43894079033f0064ff0628de4b57f9bb9357af62 Ign http://ftpmaster.internal quantal InRelease Get:1 http://ftpmaster.internal quantal Release.gpg [198 B] Get:2 http://ftpmaster.internal quantal Release [49.6 kB] Get:3 http://ftpmaster.internal quantal/main armel Packages [1120 kB] Get:4 http://ftpmaster.internal quantal/universe armel Packages [5212 kB] Get:5 http://ftpmaster.internal quantal/main Translation-en [659 kB] Get:6 http://ftpmaster.internal quantal/universe Translation-en [3669 kB] Fetched 10.7 MB in 26s (401 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: linux-libc-dev 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 854 kB of archives. After this operation, 0 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! linux-libc-dev Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ quantal/main linux-libc-dev armel 3.5.0-14.17 [854 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 854 kB in 0s (2420 kB/s) (Reading database ... 12202 files and directories currently installed.) Preparing to replace linux-libc-dev:armel 3.5.0-14.16 (using .../linux-libc-dev_3.5.0-14.17_armel.deb) ... Unpacking replacement linux-libc-dev:armel ... Setting up linux-libc-dev:armel (3.5.0-14.17) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '43894079033f0064ff0628de4b57f9bb9357af62', 'armel', 'quantal', '--nolog', '--batch', '--archive=ubuntu', '--dist=quantal', '--purpose=PRIMARY', '--architecture=armel', '--comp=universe', 'openmpi1.6_1.6.1-1.dsc'] Initiating build 43894079033f0064ff0628de4b57f9bb9357af62 with 2 jobs across 2 processor cores. Kernel reported to sbuild: 3.2.0-1418-omap4 #25-Ubuntu SMP PREEMPT Fri Aug 31 18:41:31 UTC 2012 armv7l Automatic build of openmpi1.6_1.6.1-1 on chort by sbuild/armel 1.170.5 Build started at 20120914-1118 ****************************************************************************** openmpi1.6_1.6.1-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 8.0.0~), libibverbs-dev (>= 1.1.1), gfortran, gcc (>= 4:4.1.2), chrpath, quilt, libcr-dev [amd64 armel armhf i386 powerpc], libnuma-dev [amd64 i386 ia64 mips mipsel powerpc], autoconf (>= 2.59), automake, libtool, libltdl-dev, libhwloc-dev, libtorque2-dev Checking for already installed source dependencies... debhelper: missing libibverbs-dev: missing gfortran: missing gcc: already installed (4:4.7.0-5ubuntu1 >= 4:4.1.2 is satisfied) chrpath: missing quilt: missing libcr-dev: missing autoconf: missing automake: missing libtool: missing libltdl-dev: missing libhwloc-dev: missing libtorque2-dev: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper libibverbs-dev gfortran chrpath quilt libcr-dev autoconf automake libtool libltdl-dev libhwloc-dev libtorque2-dev Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autotools-dev bsdmainutils dh-apparmor diffstat file gettext gettext-base gfortran-4.7 groff-base html2text intltool-debian libasprintf0c2 libcr0 libcroco3 libgettextpo0 libgfortran3 libhwloc5 libibverbs1 libltdl7 libmagic1 libpci-dev libpci3 libpipeline1 libtorque2 libunistring0 libxml2 libxml2-dev m4 man-db po-debconf zlib1g-dev Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc wamerican wordlist whois vacation dh-make gettext-doc gfortran-multilib gfortran-doc gfortran-4.7-multilib gfortran-4.7-doc libgfortran3-dbg groff blcr-dkms libtool-doc automaken gcj less www-browser libmail-box-perl procmail graphviz default-mta mail-transport-agent Recommended packages: curl wget lynx-cur xml-core libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autotools-dev bsdmainutils chrpath debhelper dh-apparmor diffstat file gettext gettext-base gfortran gfortran-4.7 groff-base html2text intltool-debian libasprintf0c2 libcr-dev libcr0 libcroco3 libgettextpo0 libgfortran3 libhwloc-dev libhwloc5 libibverbs-dev libibverbs1 libltdl-dev libltdl7 libmagic1 libpci-dev libpci3 libpipeline1 libtool libtorque2 libtorque2-dev libunistring0 libxml2 libxml2-dev m4 man-db po-debconf quilt zlib1g-dev 0 upgraded, 43 newly installed, 0 to remove and 0 not upgraded. Need to get 14.7 MB of archives. After this operation, 42.5 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libmagic1 libasprintf0c2 libpci3 libpipeline1 libxml2 libcroco3 libunistring0 libgettextpo0 libgfortran3 libltdl7 libhwloc5 file bsdmainutils gettext-base groff-base man-db m4 autoconf autotools-dev automake chrpath html2text gettext intltool-debian po-debconf dh-apparmor debhelper diffstat gfortran-4.7 gfortran libcr0 libcr-dev libltdl-dev zlib1g-dev libpci-dev libtool libtorque2 libtorque2-dev libxml2-dev quilt libhwloc-dev libibverbs1 libibverbs-dev Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ quantal/main libmagic1 armel 5.11-2 [169 kB] Get:2 http://ftpmaster.internal/ubuntu/ quantal/main libasprintf0c2 armel 0.18.1.1-9ubuntu1 [6500 B] Get:3 http://ftpmaster.internal/ubuntu/ quantal/main libpci3 armel 1:3.1.9-5ubuntu3 [20.4 kB] Get:4 http://ftpmaster.internal/ubuntu/ quantal/main libpipeline1 armel 1.2.1-1 [20.7 kB] Get:5 http://ftpmaster.internal/ubuntu/ quantal/main libxml2 armel 2.8.0+dfsg1-5 [601 kB] Get:6 http://ftpmaster.internal/ubuntu/ quantal/main libcroco3 armel 0.6.5-1 [82.2 kB] Get:7 http://ftpmaster.internal/ubuntu/ quantal/main libunistring0 armel 0.9.3-5 [394 kB] Get:8 http://ftpmaster.internal/ubuntu/ quantal/main libgettextpo0 armel 0.18.1.1-9ubuntu1 [111 kB] Get:9 http://ftpmaster.internal/ubuntu/ quantal/main libgfortran3 armel 4.7.1-8ubuntu1 [247 kB] Get:10 http://ftpmaster.internal/ubuntu/ quantal/main libltdl7 armel 2.4.2-1ubuntu1 [33.8 kB] Get:11 http://ftpmaster.internal/ubuntu/ quantal/universe libhwloc5 armel 1.4.1-4 [71.2 kB] Get:12 http://ftpmaster.internal/ubuntu/ quantal/main file armel 5.11-2 [17.9 kB] Get:13 http://ftpmaster.internal/ubuntu/ quantal/main bsdmainutils armel 9.0.3ubuntu1 [201 kB] Get:14 http://ftpmaster.internal/ubuntu/ quantal/main gettext-base armel 0.18.1.1-9ubuntu1 [54.0 kB] Get:15 http://ftpmaster.internal/ubuntu/ quantal/main groff-base armel 1.21-9 [967 kB] Get:16 http://ftpmaster.internal/ubuntu/ quantal/main man-db armel 2.6.2-1 [729 kB] Get:17 http://ftpmaster.internal/ubuntu/ quantal/main m4 armel 1.4.16-3 [188 kB] Get:18 http://ftpmaster.internal/ubuntu/ quantal/main autoconf all 2.69-1ubuntu1 [568 kB] Get:19 http://ftpmaster.internal/ubuntu/ quantal/main autotools-dev all 20120608.1 [42.9 kB] Get:20 http://ftpmaster.internal/ubuntu/ quantal/main automake all 1:1.11.5-2ubuntu1 [578 kB] Get:21 http://ftpmaster.internal/ubuntu/ quantal/main chrpath armel 0.13-2build2 [13.5 kB] Get:22 http://ftpmaster.internal/ubuntu/ quantal/main html2text armel 1.3.2a-15 [94.3 kB] Get:23 http://ftpmaster.internal/ubuntu/ quantal/main gettext armel 0.18.1.1-9ubuntu1 [1108 kB] Get:24 http://ftpmaster.internal/ubuntu/ quantal/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:25 http://ftpmaster.internal/ubuntu/ quantal/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:26 http://ftpmaster.internal/ubuntu/ quantal/main dh-apparmor all 2.8.0-0ubuntu2 [9684 B] Get:27 http://ftpmaster.internal/ubuntu/ quantal/main debhelper all 9.20120608ubuntu1 [623 kB] Get:28 http://ftpmaster.internal/ubuntu/ quantal/main diffstat armel 1.55-3 [22.3 kB] Get:29 http://ftpmaster.internal/ubuntu/ quantal/main gfortran-4.7 armel 4.7.1-8ubuntu1 [5386 kB] Get:30 http://ftpmaster.internal/ubuntu/ quantal/main gfortran armel 4:4.7.0-5ubuntu1 [1210 B] Get:31 http://ftpmaster.internal/ubuntu/ quantal/universe libcr0 armel 0.8.4-2ubuntu1 [19.9 kB] Get:32 http://ftpmaster.internal/ubuntu/ quantal/universe libcr-dev armel 0.8.4-2ubuntu1 [27.3 kB] Get:33 http://ftpmaster.internal/ubuntu/ quantal/main libltdl-dev armel 2.4.2-1ubuntu1 [200 kB] Get:34 http://ftpmaster.internal/ubuntu/ quantal/main zlib1g-dev armel 1:1.2.7.dfsg-13 [177 kB] Get:35 http://ftpmaster.internal/ubuntu/ quantal/main libpci-dev armel 1:3.1.9-5ubuntu3 [39.6 kB] Get:36 http://ftpmaster.internal/ubuntu/ quantal/main libtool armel 2.4.2-1ubuntu1 [302 kB] Get:37 http://ftpmaster.internal/ubuntu/ quantal/universe libtorque2 armel 2.4.16+dfsg-1build1 [74.1 kB] Get:38 http://ftpmaster.internal/ubuntu/ quantal/universe libtorque2-dev armel 2.4.16+dfsg-1build1 [17.6 kB] Get:39 http://ftpmaster.internal/ubuntu/ quantal/main libxml2-dev armel 2.8.0+dfsg1-5 [769 kB] Get:40 http://ftpmaster.internal/ubuntu/ quantal/main quilt all 0.60-2 [285 kB] Get:41 http://ftpmaster.internal/ubuntu/ quantal/universe libhwloc-dev armel 1.4.1-4 [121 kB] Get:42 http://ftpmaster.internal/ubuntu/ quantal/main libibverbs1 armel 1.1.6-1ubuntu1 [24.4 kB] Get:43 http://ftpmaster.internal/ubuntu/ quantal/main libibverbs-dev armel 1.1.6-1ubuntu1 [72.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 14.7 MB in 5s (2561 kB/s) Selecting previously unselected package libmagic1:armel. (Reading database ... 12202 files and directories currently installed.) Unpacking libmagic1:armel (from .../libmagic1_5.11-2_armel.deb) ... Selecting previously unselected package libasprintf0c2:armel. Unpacking libasprintf0c2:armel (from .../libasprintf0c2_0.18.1.1-9ubuntu1_armel.deb) ... Selecting previously unselected package libpci3:armel. Unpacking libpci3:armel (from .../libpci3_1%3a3.1.9-5ubuntu3_armel.deb) ... Selecting previously unselected package libpipeline1:armel. Unpacking libpipeline1:armel (from .../libpipeline1_1.2.1-1_armel.deb) ... Selecting previously unselected package libxml2:armel. Unpacking libxml2:armel (from .../libxml2_2.8.0+dfsg1-5_armel.deb) ... Selecting previously unselected package libcroco3:armel. Unpacking libcroco3:armel (from .../libcroco3_0.6.5-1_armel.deb) ... Selecting previously unselected package libunistring0:armel. Unpacking libunistring0:armel (from .../libunistring0_0.9.3-5_armel.deb) ... Selecting previously unselected package libgettextpo0:armel. Unpacking libgettextpo0:armel (from .../libgettextpo0_0.18.1.1-9ubuntu1_armel.deb) ... Selecting previously unselected package libgfortran3:armel. Unpacking libgfortran3:armel (from .../libgfortran3_4.7.1-8ubuntu1_armel.deb) ... Selecting previously unselected package libltdl7:armel. Unpacking libltdl7:armel (from .../libltdl7_2.4.2-1ubuntu1_armel.deb) ... Selecting previously unselected package libhwloc5:armel. Unpacking libhwloc5:armel (from .../libhwloc5_1.4.1-4_armel.deb) ... Selecting previously unselected package file. Unpacking file (from .../archives/file_5.11-2_armel.deb) ... Selecting previously unselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_9.0.3ubuntu1_armel.deb) ... Selecting previously unselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.18.1.1-9ubuntu1_armel.deb) ... Selecting previously unselected package groff-base. Unpacking groff-base (from .../groff-base_1.21-9_armel.deb) ... Selecting previously unselected package man-db. Unpacking man-db (from .../man-db_2.6.2-1_armel.deb) ... Selecting previously unselected package m4. Unpacking m4 (from .../archives/m4_1.4.16-3_armel.deb) ... Selecting previously unselected package autoconf. Unpacking autoconf (from .../autoconf_2.69-1ubuntu1_all.deb) ... Selecting previously unselected package autotools-dev. Unpacking autotools-dev (from .../autotools-dev_20120608.1_all.deb) ... Selecting previously unselected package automake. Unpacking automake (from .../automake_1%3a1.11.5-2ubuntu1_all.deb) ... Selecting previously unselected package chrpath. Unpacking chrpath (from .../chrpath_0.13-2build2_armel.deb) ... Selecting previously unselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-15_armel.deb) ... Selecting previously unselected package gettext. Unpacking gettext (from .../gettext_0.18.1.1-9ubuntu1_armel.deb) ... Selecting previously unselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously unselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2ubuntu1_all.deb) ... Selecting previously unselected package dh-apparmor. Unpacking dh-apparmor (from .../dh-apparmor_2.8.0-0ubuntu2_all.deb) ... Selecting previously unselected package debhelper. Unpacking debhelper (from .../debhelper_9.20120608ubuntu1_all.deb) ... Selecting previously unselected package diffstat. Unpacking diffstat (from .../diffstat_1.55-3_armel.deb) ... Selecting previously unselected package gfortran-4.7. Unpacking gfortran-4.7 (from .../gfortran-4.7_4.7.1-8ubuntu1_armel.deb) ... Selecting previously unselected package gfortran. Unpacking gfortran (from .../gfortran_4%3a4.7.0-5ubuntu1_armel.deb) ... Selecting previously unselected package libcr0. Unpacking libcr0 (from .../libcr0_0.8.4-2ubuntu1_armel.deb) ... Selecting previously unselected package libcr-dev. Unpacking libcr-dev (from .../libcr-dev_0.8.4-2ubuntu1_armel.deb) ... Selecting previously unselected package libltdl-dev:armel. Unpacking libltdl-dev:armel (from .../libltdl-dev_2.4.2-1ubuntu1_armel.deb) ... Selecting previously unselected package zlib1g-dev:armel. Unpacking zlib1g-dev:armel (from .../zlib1g-dev_1%3a1.2.7.dfsg-13_armel.deb) ... Selecting previously unselected package libpci-dev. Unpacking libpci-dev (from .../libpci-dev_1%3a3.1.9-5ubuntu3_armel.deb) ... Selecting previously unselected package libtool. Unpacking libtool (from .../libtool_2.4.2-1ubuntu1_armel.deb) ... Selecting previously unselected package libtorque2. Unpacking libtorque2 (from .../libtorque2_2.4.16+dfsg-1build1_armel.deb) ... Selecting previously unselected package libtorque2-dev. Unpacking libtorque2-dev (from .../libtorque2-dev_2.4.16+dfsg-1build1_armel.deb) ... Selecting previously unselected package libxml2-dev:armel. Unpacking libxml2-dev:armel (from .../libxml2-dev_2.8.0+dfsg1-5_armel.deb) ... Selecting previously unselected package quilt. Unpacking quilt (from .../archives/quilt_0.60-2_all.deb) ... Selecting previously unselected package libhwloc-dev. Unpacking libhwloc-dev (from .../libhwloc-dev_1.4.1-4_armel.deb) ... Selecting previously unselected package libibverbs1. Unpacking libibverbs1 (from .../libibverbs1_1.1.6-1ubuntu1_armel.deb) ... Selecting previously unselected package libibverbs-dev. Unpacking libibverbs-dev (from .../libibverbs-dev_1.1.6-1ubuntu1_armel.deb) ... Setting up libmagic1:armel (5.11-2) ... Setting up libasprintf0c2:armel (0.18.1.1-9ubuntu1) ... Setting up libpci3:armel (1:3.1.9-5ubuntu3) ... Setting up libpipeline1:armel (1.2.1-1) ... Setting up libxml2:armel (2.8.0+dfsg1-5) ... Setting up libcroco3:armel (0.6.5-1) ... Setting up libunistring0:armel (0.9.3-5) ... Setting up libgettextpo0:armel (0.18.1.1-9ubuntu1) ... Setting up libgfortran3:armel (4.7.1-8ubuntu1) ... Setting up libltdl7:armel (2.4.2-1ubuntu1) ... Setting up libhwloc5:armel (1.4.1-4) ... Setting up file (5.11-2) ... Setting up bsdmainutils (9.0.3ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up gettext-base (0.18.1.1-9ubuntu1) ... Setting up groff-base (1.21-9) ... Setting up man-db (2.6.2-1) ... Building database of manual pages ... Setting up m4 (1.4.16-3) ... Setting up autoconf (2.69-1ubuntu1) ... Setting up autotools-dev (20120608.1) ... Setting up automake (1:1.11.5-2ubuntu1) ... update-alternatives: using /usr/bin/automake-1.11 to provide /usr/bin/automake (automake) in auto mode Setting up chrpath (0.13-2build2) ... Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-9ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up dh-apparmor (2.8.0-0ubuntu2) ... Setting up debhelper (9.20120608ubuntu1) ... Setting up diffstat (1.55-3) ... Setting up gfortran-4.7 (4.7.1-8ubuntu1) ... Setting up gfortran (4:4.7.0-5ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode Setting up libcr0 (0.8.4-2ubuntu1) ... Setting up libcr-dev (0.8.4-2ubuntu1) ... Setting up libltdl-dev:armel (2.4.2-1ubuntu1) ... Setting up zlib1g-dev:armel (1:1.2.7.dfsg-13) ... Setting up libpci-dev (1:3.1.9-5ubuntu3) ... Setting up libtool (2.4.2-1ubuntu1) ... Setting up libtorque2 (2.4.16+dfsg-1build1) ... Setting up libtorque2-dev (2.4.16+dfsg-1build1) ... Setting up libxml2-dev:armel (2.8.0+dfsg1-5) ... Setting up quilt (0.60-2) ... Setting up libhwloc-dev (1.4.1-4) ... Setting up libibverbs1 (1.1.6-1ubuntu1) ... Setting up libibverbs-dev (1.1.6-1ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.15-0ubuntu18 make_3.81-8.2 dpkg-dev_1.16.7ubuntu3 gcc-4.7_4.7.1-8ubuntu1 g++-4.7_4.7.1-8ubuntu1 binutils_2.22.90.20120913-1ubuntu1 libstdc++6-4.7-dev_4.7.1-8ubuntu1 libstdc++6_4.7.1-8ubuntu1 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Fri Aug 24 15:21:48 2012 UTC using DSA key ID DD899610 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./openmpi1.6_1.6.1-1.dsc dpkg-source: info: extracting openmpi1.6 in openmpi1.6-1.6.1 dpkg-source: info: unpacking openmpi1.6_1.6.1.orig.tar.gz dpkg-source: info: unpacking openmpi1.6_1.6.1-1.debian.tar.gz dpkg-source: info: applying ompi_autogen_sh.patch dpkg-source: info: applying build_hurd dpkg-source: info: applying manpage_macros dpkg-source: info: applying arm_detection.diff dpkg-buildpackage: source package openmpi1.6 dpkg-buildpackage: source version 1.6.1-1 dpkg-source --before-build openmpi1.6-1.6.1 dpkg-buildpackage: host architecture armel /usr/bin/fakeroot debian/rules clean dh clean --parallel #--with autotools_dev dh_testdir -O--parallel dh_auto_clean -O--parallel dh_clean -O--parallel debian/rules build-arch dh build-arch --parallel #--with autotools_dev dh_testdir -a -O--parallel debian/rules override_dh_auto_configure make[1]: Entering directory `/build/buildd/openmpi1.6-1.6.1' ./autogen.sh [Checking] command line parameters [Checking] prerequisites Configuring projects: opal orte ompi /build/buildd/openmpi1.6-1.6.1 *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/backtrace/darwin --> Adding to top-level configure m4-configure subdirs: --> opal/mca/backtrace/darwin --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/backtrace/execinfo --> Adding to top-level configure m4-configure subdirs: --> opal/mca/backtrace/execinfo --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/backtrace/none --> Adding to top-level configure m4-configure subdirs: --> opal/mca/backtrace/none --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/backtrace/printstack --> Adding to top-level configure m4-configure subdirs: --> opal/mca/backtrace/printstack --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/opal/mca/carto/auto_detect --> Adding to top-level configure no-configure subdirs: --> opal/mca/carto/auto_detect --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/opal/mca/carto/file --> Adding to top-level configure no-configure subdirs: --> opal/mca/carto/file --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/crs/blcr --> Adding to top-level configure m4-configure subdirs: --> opal/mca/crs/blcr --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/opal/mca/crs/none --> Adding to top-level configure no-configure subdirs: --> opal/mca/crs/none --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/crs/self --> Adding to top-level configure m4-configure subdirs: --> opal/mca/crs/self --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/hwloc/external --> Adding to top-level configure m4-configure subdirs: --> opal/mca/hwloc/external --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/hwloc/hwloc132 --> Adding to top-level configure m4-configure subdirs: --> opal/mca/hwloc/hwloc132 --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/installdirs/config --> Adding to top-level configure m4-configure subdirs: --> opal/mca/installdirs/config --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/installdirs/env --> Adding to top-level configure m4-configure subdirs: --> opal/mca/installdirs/env --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/installdirs/windows --> Adding to top-level configure m4-configure subdirs: --> opal/mca/installdirs/windows --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/opal/mca/maffinity/first_use --> Adding to top-level configure no-configure subdirs: --> opal/mca/maffinity/first_use --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/maffinity/hwloc --> Adding to top-level configure m4-configure subdirs: --> opal/mca/maffinity/hwloc --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/memchecker/valgrind --> Adding to top-level configure m4-configure subdirs: --> opal/mca/memchecker/valgrind --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/memory/linux --> Adding to top-level configure m4-configure subdirs: --> opal/mca/memory/linux --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/memory/malloc_solaris --> Adding to top-level configure m4-configure subdirs: --> opal/mca/memory/malloc_solaris --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/paffinity/hwloc --> Adding to top-level configure m4-configure subdirs: --> opal/mca/paffinity/hwloc --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/paffinity/test --> Adding to top-level configure m4-configure subdirs: --> opal/mca/paffinity/test --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/pstat/darwin --> Adding to top-level configure m4-configure subdirs: --> opal/mca/pstat/darwin --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/pstat/linux --> Adding to top-level configure m4-configure subdirs: --> opal/mca/pstat/linux --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/shmem/mmap --> Adding to top-level configure m4-configure subdirs: --> opal/mca/shmem/mmap --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/shmem/posix --> Adding to top-level configure m4-configure subdirs: --> opal/mca/shmem/posix --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/shmem/sysv --> Adding to top-level configure m4-configure subdirs: --> opal/mca/shmem/sysv --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/shmem/windows --> Adding to top-level configure m4-configure subdirs: --> opal/mca/shmem/windows --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/sysinfo/darwin --> Adding to top-level configure m4-configure subdirs: --> opal/mca/sysinfo/darwin --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/sysinfo/linux --> Adding to top-level configure m4-configure subdirs: --> opal/mca/sysinfo/linux --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/sysinfo/solaris --> Adding to top-level configure m4-configure subdirs: --> opal/mca/sysinfo/solaris --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/timer/aix --> Adding to top-level configure m4-configure subdirs: --> opal/mca/timer/aix --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/timer/altix --> Adding to top-level configure m4-configure subdirs: --> opal/mca/timer/altix --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/timer/catamount --> Adding to top-level configure m4-configure subdirs: --> opal/mca/timer/catamount --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/timer/darwin --> Adding to top-level configure m4-configure subdirs: --> opal/mca/timer/darwin --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/timer/linux --> Adding to top-level configure m4-configure subdirs: --> opal/mca/timer/linux --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/timer/solaris --> Adding to top-level configure m4-configure subdirs: --> opal/mca/timer/solaris --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/opal/mca/timer/windows --> Adding to top-level configure m4-configure subdirs: --> opal/mca/timer/windows --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/errmgr/default --> Adding to top-level configure no-configure subdirs: --> orte/mca/errmgr/default --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/alps --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/alps --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/cnos --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/cnos --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/env --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/env --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/hnp --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/hnp --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/lsf --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/lsf --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/pmi --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/pmi --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/portals_utcp --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/portals_utcp --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/singleton --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/singleton --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/slave --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/slave --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/slurm --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/slurm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/slurmd --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/slurmd --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/tm --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/tm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ess/tool --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ess/tool --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/filem/rsh --> Adding to top-level configure no-configure subdirs: --> orte/mca/filem/rsh --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/grpcomm/bad --> Adding to top-level configure m4-configure subdirs: --> orte/mca/grpcomm/bad --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/grpcomm/basic --> Adding to top-level configure m4-configure subdirs: --> orte/mca/grpcomm/basic --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/grpcomm/cnos --> Adding to top-level configure m4-configure subdirs: --> orte/mca/grpcomm/cnos --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/grpcomm/hier --> Adding to top-level configure m4-configure subdirs: --> orte/mca/grpcomm/hier --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/grpcomm/pmi --> Adding to top-level configure m4-configure subdirs: --> orte/mca/grpcomm/pmi --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/iof/hnp --> Adding to top-level configure no-configure subdirs: --> orte/mca/iof/hnp --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/iof/orted --> Adding to top-level configure no-configure subdirs: --> orte/mca/iof/orted --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/iof/tool --> Adding to top-level configure no-configure subdirs: --> orte/mca/iof/tool --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/notifier/command --> Adding to top-level configure m4-configure subdirs: --> orte/mca/notifier/command --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/notifier/ftb --> Adding to top-level configure m4-configure subdirs: --> orte/mca/notifier/ftb --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/notifier/smtp --> Adding to top-level configure m4-configure subdirs: --> orte/mca/notifier/smtp --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/notifier/syslog --> Adding to top-level configure m4-configure subdirs: --> orte/mca/notifier/syslog --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/odls/default --> Adding to top-level configure m4-configure subdirs: --> orte/mca/odls/default --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/odls/process --> Adding to top-level configure m4-configure subdirs: --> orte/mca/odls/process --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/oob/tcp --> Adding to top-level configure m4-configure subdirs: --> orte/mca/oob/tcp --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/plm/alps --> Adding to top-level configure m4-configure subdirs: --> orte/mca/plm/alps --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/plm/ccp --> Adding to top-level configure m4-configure subdirs: --> orte/mca/plm/ccp --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/plm/lsf --> Adding to top-level configure m4-configure subdirs: --> orte/mca/plm/lsf --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/plm/process --> Adding to top-level configure m4-configure subdirs: --> orte/mca/plm/process --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/plm/rsh --> Adding to top-level configure m4-configure subdirs: --> orte/mca/plm/rsh --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/plm/slurm --> Adding to top-level configure m4-configure subdirs: --> orte/mca/plm/slurm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/plm/tm --> Adding to top-level configure m4-configure subdirs: --> orte/mca/plm/tm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ras/alps --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ras/alps --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ras/ccp --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ras/ccp --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ras/cm --> Adding to top-level configure no-configure subdirs: --> orte/mca/ras/cm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ras/gridengine --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ras/gridengine --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ras/loadleveler --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ras/loadleveler --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ras/lsf --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ras/lsf --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ras/slurm --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ras/slurm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/ras/tm --> Adding to top-level configure m4-configure subdirs: --> orte/mca/ras/tm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/rmaps/load_balance --> Adding to top-level configure no-configure subdirs: --> orte/mca/rmaps/load_balance --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/rmaps/rank_file --> Adding to top-level configure no-configure subdirs: --> orte/mca/rmaps/rank_file --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/rmaps/resilient --> Adding to top-level configure no-configure subdirs: --> orte/mca/rmaps/resilient --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/rmaps/round_robin --> Adding to top-level configure no-configure subdirs: --> orte/mca/rmaps/round_robin --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/rmaps/seq --> Adding to top-level configure no-configure subdirs: --> orte/mca/rmaps/seq --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/rmaps/topo --> Adding to top-level configure no-configure subdirs: --> orte/mca/rmaps/topo --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/rml/ftrm --> Adding to top-level configure m4-configure subdirs: --> orte/mca/rml/ftrm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/rml/oob --> Adding to top-level configure no-configure subdirs: --> orte/mca/rml/oob --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/routed/binomial --> Adding to top-level configure no-configure subdirs: --> orte/mca/routed/binomial --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/routed/cm --> Adding to top-level configure no-configure subdirs: --> orte/mca/routed/cm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/routed/direct --> Adding to top-level configure no-configure subdirs: --> orte/mca/routed/direct --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/routed/linear --> Adding to top-level configure no-configure subdirs: --> orte/mca/routed/linear --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/routed/radix --> Adding to top-level configure no-configure subdirs: --> orte/mca/routed/radix --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/orte/mca/routed/slave --> Adding to top-level configure no-configure subdirs: --> orte/mca/routed/slave --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/orte/mca/snapc/full --> Adding to top-level configure m4-configure subdirs: --> orte/mca/snapc/full --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/allocator/basic --> Adding to top-level configure no-configure subdirs: --> ompi/mca/allocator/basic --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/allocator/bucket --> Adding to top-level configure no-configure subdirs: --> ompi/mca/allocator/bucket --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/bml/r2 --> Adding to top-level configure no-configure subdirs: --> ompi/mca/bml/r2 --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/btl/elan --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/btl/elan --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/btl/mx --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/btl/mx --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/btl/ofud --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/btl/ofud --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/btl/openib --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/btl/openib --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/btl/portals --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/btl/portals --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/btl/sctp --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/btl/sctp --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/btl/self --> Adding to top-level configure no-configure subdirs: --> ompi/mca/btl/self --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/btl/sm --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/btl/sm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/btl/tcp --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/btl/tcp --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/btl/udapl --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/btl/udapl --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/coll/basic --> Adding to top-level configure no-configure subdirs: --> ompi/mca/coll/basic --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/coll/fca --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/coll/fca --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/coll/hierarch --> Adding to top-level configure no-configure subdirs: --> ompi/mca/coll/hierarch --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/coll/inter --> Adding to top-level configure no-configure subdirs: --> ompi/mca/coll/inter --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/coll/self --> Adding to top-level configure no-configure subdirs: --> ompi/mca/coll/self --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/coll/sm --> Adding to top-level configure no-configure subdirs: --> ompi/mca/coll/sm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/coll/sync --> Adding to top-level configure no-configure subdirs: --> ompi/mca/coll/sync --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/coll/tuned --> Adding to top-level configure no-configure subdirs: --> ompi/mca/coll/tuned --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/common/mx --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/common/mx --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/common/portals --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/common/portals --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/common/sm --> Adding to top-level configure no-configure subdirs: --> ompi/mca/common/sm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/crcp/bkmrk --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/crcp/bkmrk --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/dpm/orte --> Adding to top-level configure no-configure subdirs: --> ompi/mca/dpm/orte --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/io/romio --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/io/romio --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile ==> Found autogen.subdirs -- sub-traversing... *** Running autogen.sh in romio *** (started in /build/buildd/openmpi1.6-1.6.1/ompi/mca/io/romio) [Checking] command line parameters [Checking] prerequisites *** Found configure.(in|ac) *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/io/romio/romio *** Running GNU tools [Running] libtoolize --automake --copy [Running] aclocal [Running] autoheader touch: cannot touch `config/libtool.m4': No such file or directory [Running] autoconf [Running] automake --foreign -a --copy --include-deps configure.in:2125: installing `confdb/config.guess' configure.in:2125: installing `confdb/config.sub' configure.in:210: installing `confdb/install-sh' configure.in:210: installing `confdb/missing' adio/ad_bgl/Makefile.am: installing `confdb/depcomp' ++ Patching configure for Libtool PGI 10 fortran compiler name ++ Patching configure for Libtool PGI version number regexps <== Back in /build/buildd/openmpi1.6-1.6.1/ompi/mca/io/romio <== autogen.sh continuing... *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/mpool/fake --> Adding to top-level configure no-configure subdirs: --> ompi/mca/mpool/fake --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/mpool/rdma --> Adding to top-level configure no-configure subdirs: --> ompi/mca/mpool/rdma --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/mpool/sm --> Adding to top-level configure no-configure subdirs: --> ompi/mca/mpool/sm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/mtl/mx --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/mtl/mx --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/mtl/mxm --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/mtl/mxm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/mtl/portals --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/mtl/portals --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/mtl/psm --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/mtl/psm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/osc/pt2pt --> Adding to top-level configure no-configure subdirs: --> ompi/mca/osc/pt2pt --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/osc/rdma --> Adding to top-level configure no-configure subdirs: --> ompi/mca/osc/rdma --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/pml/bfo --> Adding to top-level configure no-configure subdirs: --> ompi/mca/pml/bfo --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/pml/cm --> Adding to top-level configure no-configure subdirs: --> ompi/mca/pml/cm --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/pml/crcpw --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/pml/crcpw --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/pml/csum --> Adding to top-level configure no-configure subdirs: --> ompi/mca/pml/csum --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/pml/ob1 --> Adding to top-level configure no-configure subdirs: --> ompi/mca/pml/ob1 --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/pml/v *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/pml/v/mca/vprotocol/pessimist --> Adding to top-level configure no-configure subdirs: --> ompi/mca/pml/v/mca/vprotocol/pessimist --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/pml/v --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/pubsub/orte --> Adding to top-level configure no-configure subdirs: --> ompi/mca/pubsub/orte --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/pubsub/pmi --> Adding to top-level configure m4-configure subdirs: --> ompi/mca/pubsub/pmi --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/rcache/vma --> Adding to top-level configure no-configure subdirs: --> ompi/mca/rcache/vma --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params *** /build/buildd/openmpi1.6-1.6.1/ompi/mca/topo/unity --> Adding to top-level configure no-configure subdirs: --> ompi/mca/topo/unity --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/contrib/libompitrace --> Adding to top-level configure m4-configure subdirs: --> ompi/contrib/libompitrace --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Nothing found; directory skipped *** /build/buildd/openmpi1.6-1.6.1/ompi/contrib/vt ==> Found autogen.subdirs -- sub-traversing... *** Running autogen.sh in vt *** (started in /build/buildd/openmpi1.6-1.6.1/ompi/contrib/vt) [Checking] command line parameters [Checking] prerequisites *** Found configure.(in|ac) *** /build/buildd/openmpi1.6-1.6.1/ompi/contrib/vt/vt *** Running GNU tools [Running] libtoolize --automake --copy [Running] aclocal [Running] autoheader [Running] autoconf [Running] automake --foreign -a --copy --include-deps configure.in:96: installing `config/compile' configure.in:34: installing `config/config.guess' configure.in:34: installing `config/config.sub' configure.in:8: installing `config/install-sh' configure.in:8: installing `config/missing' rfg/Makefile.am: installing `config/depcomp' ++ Patching configure for Libtool PGI 10 fortran compiler name ++ Patching configure for Libtool PGI version number regexps *** Running autogen.sh in vt/extlib/otf *** (started in /build/buildd/openmpi1.6-1.6.1/ompi/contrib/vt) [Checking] command line parameters [Checking] prerequisites *** Found configure.(in|ac) *** /build/buildd/openmpi1.6-1.6.1/ompi/contrib/vt/vt/extlib/otf *** Running GNU tools [Running] libtoolize --automake --copy [Running] aclocal [Running] autoheader [Running] autoconf [Running] automake --foreign -a --copy --include-deps configure.in:10: installing `config/config.guess' configure.in:10: installing `config/config.sub' configure.in:11: installing `config/install-sh' configure.in:11: installing `config/missing' otfauxlib/Makefile.am: installing `config/depcomp' ++ Patching configure for Libtool PGI 10 fortran compiler name ++ Patching configure for Libtool PGI version number regexps <== Back in /build/buildd/openmpi1.6-1.6.1/ompi/contrib/vt <== autogen.sh continuing... *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mpiext/affinity --> Adding to top-level configure m4-configure subdirs: --> ompi/mpiext/affinity --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.params and configure.m4 *** /build/buildd/openmpi1.6-1.6.1/ompi/mpiext/example --> Adding to top-level configure m4-configure subdirs: --> ompi/mpiext/example --> Adding to top-level configure AC_CONFIG_FILES list: --> Makefile *** Found configure.(in|ac) *** /build/buildd/openmpi1.6-1.6.1 *** Running GNU tools [Running] autom4te --language=m4sh ompi_get_version.m4sh -o ompi_get_version.sh [Running] libtoolize --automake --copy --ltdl ** Adjusting libltdl for OMPI :-( ++ patching PGI -tp bug in ltmain.sh -- your libtool doesn't need this! yay! ++ patching for argz bugfix in libtool 1.5 -- your libtool doesn't need this! yay! ++ patching 64-bit OS X bug in ltmain.sh -- your libtool doesn't need this! yay! ++ RTLD_GLOBAL in libltdl -- your libltdl doesn't need this! yay! ++ preopen error masking ib libltdl patching file opal/libltdl/loaders/preopen.c ++ patching for ifort (LT 2.2.0-4) -- your libltdl doesn't need this! yay! [Running] aclocal -I config -I opal/config -I orte/config -I ompi/config [Running] autoheader ** Adjusting libtool for OMPI :-( ++ patching for pathscale multi-line output (LT 2.x) ++ patching for ifort (LT 2.2.0-4) -- your libltdl doesn't need this! yay! ++ patching for IBM xlf (LT < 2.2.8) -- your libtool doesn't need this! yay! ++ patching to remove solaris Cstd ++ patching for Sun Studio Fortran compilers [Running] autoconf [Running] automake --foreign -a --copy --include-deps configure.ac:284: installing `config/compile' configure.ac:67: installing `config/config.guess' configure.ac:67: installing `config/config.sub' configure.ac:80: installing `config/install-sh' configure.ac:80: installing `config/missing' ompi/Makefile.am: installing `config/depcomp' ++ Patching configure for Libtool PGI 10 fortran compiler name ++ Patching configure for Libtool PGI version number regexps ++ Modifying configure for Sun Studio Fortran compilers === Patching configure for Sun Studio Fortran version strings () === Patching configure for Sun Studio Fortran version strings (_F77) === Patching configure for Sun Studio Fortran version strings (_FC) dh_auto_configure -- \ --enable-ft-thread --with-ft=cr --with-blcr=/usr --with-blcr-libdir=/usr/lib \ --with-threads=posix --enable-opal-multi-threads \ --with-hwloc=/usr/ \ --with-libltdl=external \ --with-devel-headers \ --with-slurm \ --with-sge \ --enable-heterogeneous \ --disable-vt \ --sysconfdir=/etc/openmpi \ --libdir=\${prefix}/lib/openmpi/lib \ --includedir=\${prefix}/lib/openmpi/include configure: WARNING: unrecognized options: --disable-maintainer-mode ============================================================================ == Configuring Open MPI ============================================================================ *** Startup tests checking build system type... arm-unknown-linux-gnueabi checking host system type... arm-unknown-linux-gnueabi checking target system type... arm-unknown-linux-gnueabi checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking how to create a ustar tar archive... gnutar checking dependency style of gcc... none checking whether make supports nested variables... yes *** Checking versions checking Open MPI version... 1.6.1 checking Open MPI release date... Aug 22, 2012 checking Open MPI Subversion repository version... r27106 checking Open MPI Run-Time Environment version... 1.6.1 checking Open MPI Run-Time Environment release date... Aug 22, 2012 checking Open MPI Run-Time Environment Subversion repository version... r27106 checking Open Portable Access Layer version... 1.6.1 checking Open Portable Access Layer release date... Aug 22, 2012 checking Open Portable Access Layer Subversion repository version... r27106 *** Initialization, setup configure: builddir: /build/buildd/openmpi1.6-1.6.1 configure: srcdir: /build/buildd/openmpi1.6-1.6.1 installing to directory "/usr" *** OPAL Configuration options checking if want to run code coverage... no checking if want to compile with branch probabilities... no checking if want to debug memory usage... no checking if want to profile memory usage... no checking if want developer-level compiler pickyness... no checking if want developer-level debugging code... no checking if want to install project-internal header files... yes checking if want pretty-print stacktrace... yes checking if want pty support... yes checking if want weak symbol support... yes checking if want dlopen support... yes checking if want heterogeneous support... yes checking if want trace file debugging... no checking if want fault tolerance... Enabled cr (Specified cr) configure: WARNING: ************************************************** configure: WARNING: *** Fault Tolerance Integration into Open MPI is * configure: WARNING: *** a research quality implementation, and care * configure: WARNING: *** should be used when choosing to enable it. * configure: WARNING: ************************************************** checking if want IPv6 support... no checking if want package/brand string... Open MPI buildd@chort Distribution checking if want ident string... 1.6.1 checking if want to use an alternative checksum algo for messages... no checking maximum length of processor name... 256 checking maximum length of error string... 256 checking maximum length of object name... 64 checking maximum length of info key... 36 checking maximum length of info val... 256 checking maximum length of port name... 1024 checking maximum length of datarep string... 128 *** ORTE Configuration options checking if want full RTE support... yes checking if want orterun "--prefix" behavior to be enabled by default... no *** OMPI Configuration options checking if want compile-time warnings inside of mpi.h... no checking if want sparse process groups... no checking if want peruse support... no checking if want Fortran 77 bindings... yes checking if want Fortran 90 bindings... yes checking Fortran 90 bindings "size"... small checking if want PMPI... yes checking if want C++ bindings... yes checking if want MPI::SEEK_SET support... yes checking if want run-time MPI parameter checking... runtime checking max supported array dimension in F90 MPI bindings... 4 ============================================================================ == Compiler and preprocessor tests ============================================================================ *** C compiler and preprocessor checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc and cc understand -c and -o together... yes checking for the C compiler vendor... gnu checking for ANSI C header files... (cached) yes checking if gcc supports -finline-functions... yes checking if gcc supports -fno-strict-aliasing... yes configure: WARNING: -fno-strict-aliasing has been added to CFLAGS checking if gcc supports __builtin_expect... yes checking if gcc supports __builtin_prefetch... yes checking for C optimization flags... -DNDEBUG -g -O2 -finline-functions -fno-strict-aliasing checking for Interix environment... no checking for C ident string support... #ident checking for int8_t... yes checking for uint8_t... yes checking for int16_t... yes checking for uint16_t... yes checking for int32_t... yes checking for uint32_t... yes checking for int64_t... yes checking for uint64_t... yes checking for int128_t... no checking for uint128_t... no checking for long long... yes checking for long double... yes checking for float _Complex... yes checking for double _Complex... yes checking for long double _Complex... yes checking for intptr_t... yes checking for uintptr_t... yes checking for mode_t... yes checking for ssize_t... yes checking for ptrdiff_t... yes checking size of char... 1 checking size of short... 2 checking size of int... 4 checking size of long... 4 checking size of long long... 8 checking size of float... 4 checking size of double... 8 checking size of long double... 8 checking size of float _Complex... 8 checking size of double _Complex... 16 checking size of long double _Complex... 16 checking size of void *... 4 checking size of size_t... 4 checking size of ssize_t... 4 checking size of ptrdiff_t... 4 checking size of wchar_t... 4 checking alignment of _Bool... 1 checking alignment of int8_t... 1 checking alignment of int16_t... 2 checking alignment of int32_t... 4 checking alignment of int64_t... 8 checking alignment of char... 1 checking alignment of short... 2 checking alignment of wchar_t... 4 checking alignment of int... 4 checking alignment of long... 4 checking alignment of long long... 8 checking alignment of float... 4 checking alignment of double... 8 checking alignment of long double... 8 checking alignment of float _Complex... 4 checking alignment of double _Complex... 8 checking alignment of long double _Complex... 8 checking alignment of void *... 4 checking for C bool type... no checking size of _Bool... 1 checking for inline... __inline__ checking for C/C++ restrict keyword... __restrict checking for weak symbol support... yes checking for functional offsetof macro... yes *** C++ compiler and preprocessor checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking how to run the C++ preprocessor... g++ -E checking for the C++ compiler vendor... gnu checking if g++ supports -finline-functions... yes configure: WARNING: -finline-functions has been added to CXXFLAGS checking if C and C++ are link compatible... yes checking for C++ optimization flags... -O3 -DNDEBUG -finline-functions checking size of bool... 1 checking alignment of bool... 1 *** C++ compiler and preprocessor checking whether we are using the GNU C++ compiler... (cached) yes checking whether g++ accepts -g... (cached) yes checking dependency style of g++... (cached) none checking how to run the C++ preprocessor... g++ -E checking if C++ compiler works... yes checking if g++ supports -finline-functions... yes configure: WARNING: -finline-functions has been added to CXXFLAGS checking if C and C++ are link compatible... (cached) yes checking for C++ optimization flags... -O3 -DNDEBUG -finline-functions checking size of bool... (cached) 1 checking alignment of bool... (cached) 1 checking if able to build the MPI C++ bindings... yes checking for the C++ compiler vendor... (cached) gnu checking if want C++ exception handling... no checking for C++ template_repository_directory... not used checking for C++ compiler template parameters... none needed checking for C++ ident string support... #ident checking if g++ supports __builtin_expect... yes checking if g++ supports __builtin_prefetch... yes checking if g++ supports const_cast<> properly... yes *** Compiler characteristics checking for __attribute__... yes checking for __attribute__(aligned)... yes checking for __attribute__(always_inline)... yes checking for __attribute__(cold)... yes checking for __attribute__(const)... yes checking for __attribute__(deprecated)... yes checking for __attribute__(deprecated_argument)... yes checking for __attribute__(format)... yes checking for __attribute__(format_funcptr)... yes checking for __attribute__(hot)... yes checking for __attribute__(malloc)... yes checking for __attribute__(may_alias)... yes checking for __attribute__(no_instrument_function)... yes checking for __attribute__(nonnull)... yes checking for __attribute__(noreturn)... yes checking for __attribute__(noreturn_funcptr)... yes checking for __attribute__(packed)... yes checking for __attribute__(pure)... yes checking for __attribute__(sentinel)... yes checking for __attribute__(unused)... yes checking for __attribute__(visibility)... yes checking for __attribute__(warn_unused_result)... yes checking for __attribute__(weak_alias)... yes checking for compiler familyid... 1 checking for compiler familyname... GNU checking for compiler version... 263937 checking for compiler version_str... 4.7.1 *** Assembler checking dependency style of gcc... none checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking for fgrep... /bin/grep -F checking if need to remove -g from CCASFLAGS... no checking whether to enable smp locks... yes checking if .proc/endp is needed... no checking directive for setting text section... .text checking directive for exporting symbols... .globl checking for objdump... objdump checking if .note.GNU-stack is needed... yes checking suffix for labels... : checking prefix for global symbol labels... checking prefix for lsym labels... .L checking prefix for function in .type... # checking if .size is needed... yes checking if .align directive takes logarithmic value... yes checking if gcc supports GCC inline assembly... yes checking if gcc supports DEC inline assembly... no checking if gcc supports XLC inline assembly... no checking if g++ supports GCC inline assembly... yes checking if g++ supports DEC inline assembly... no checking if g++ supports XLC inline assembly... no checking for assembly format... default-.text-.globl-:--.L-#-1-1-1-0-1 checking for asssembly architecture... ARM checking for perl... perl checking for pre-built assembly file... no (not in asm-data) checking whether possible to generate assembly file... yes checking for atomic assembly filename... atomic-local.s *** Fortran 77 compiler checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes *** Fortran 90/95 compiler checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking if Fortran 77 compiler works... yes checking gfortran external symbol convention... single underscore checking if C and Fortran 77 are link compatible... yes checking to see if F77 compiler likes the C++ exception flags... skipped (no C++ exceptions flags) checking to see if mpif77/mpif90 compilers need additional linker flags... none checking if Fortran 77 compiler supports CHARACTER... yes checking size of Fortran 77 CHARACTER... 1 checking for C type corresponding to CHARACTER... char checking alignment of Fortran CHARACTER... 1 checking if Fortran 77 compiler supports LOGICAL... yes checking size of Fortran 77 LOGICAL... 4 checking for C type corresponding to LOGICAL... int checking alignment of Fortran LOGICAL... 4 checking if Fortran 77 compiler supports LOGICAL*1... yes checking size of Fortran 77 LOGICAL*1... 1 checking for C type corresponding to LOGICAL*1... char checking alignment of Fortran LOGICAL*1... 1 checking if Fortran 77 compiler supports LOGICAL*2... yes checking size of Fortran 77 LOGICAL*2... 2 checking for C type corresponding to LOGICAL*2... short checking alignment of Fortran LOGICAL*2... 2 checking if Fortran 77 compiler supports LOGICAL*4... yes checking size of Fortran 77 LOGICAL*4... 4 checking for C type corresponding to LOGICAL*4... int checking alignment of Fortran LOGICAL*4... 4 checking if Fortran 77 compiler supports LOGICAL*8... yes checking size of Fortran 77 LOGICAL*8... 8 checking for C type corresponding to LOGICAL*8... long long checking alignment of Fortran LOGICAL*8... 8 checking if Fortran 77 compiler supports INTEGER... yes checking size of Fortran 77 INTEGER... 4 checking for C type corresponding to INTEGER... int checking alignment of Fortran INTEGER... 4 checking if Fortran 77 compiler supports INTEGER*1... yes checking size of Fortran 77 INTEGER*1... 1 checking for C type corresponding to INTEGER*1... char checking alignment of Fortran INTEGER*1... 1 checking if Fortran 77 compiler supports INTEGER*2... yes checking size of Fortran 77 INTEGER*2... 2 checking for C type corresponding to INTEGER*2... short checking alignment of Fortran INTEGER*2... 2 checking if Fortran 77 compiler supports INTEGER*4... yes checking size of Fortran 77 INTEGER*4... 4 checking for C type corresponding to INTEGER*4... int checking alignment of Fortran INTEGER*4... 4 checking if Fortran 77 compiler supports INTEGER*8... yes checking size of Fortran 77 INTEGER*8... 8 checking for C type corresponding to INTEGER*8... long long checking alignment of Fortran INTEGER*8... 8 checking if Fortran 77 compiler supports INTEGER*16... no checking if Fortran 77 compiler supports REAL... yes checking size of Fortran 77 REAL... 4 checking for C type corresponding to REAL... float checking alignment of Fortran REAL... 4 checking if Fortran 77 compiler supports REAL*2... no checking if Fortran 77 compiler supports REAL*4... yes checking size of Fortran 77 REAL*4... 4 checking for C type corresponding to REAL*4... float checking alignment of Fortran REAL*4... 4 checking if Fortran 77 compiler supports REAL*8... yes checking size of Fortran 77 REAL*8... 8 checking for C type corresponding to REAL*8... double checking alignment of Fortran REAL*8... 8 checking if Fortran 77 compiler supports REAL*16... no checking for C type matching bit representation of REAL*16... skipped (no REAL*16) configure: WARNING: MPI_REAL16 and MPI_COMPLEX32 support have been disabled checking if Fortran 77 compiler supports DOUBLE PRECISION... yes checking size of Fortran 77 DOUBLE PRECISION... 8 checking for C type corresponding to DOUBLE PRECISION... double checking alignment of Fortran DOUBLE PRECISION... 8 checking if Fortran 77 compiler supports COMPLEX... yes checking size of Fortran 77 COMPLEX... 8 checking alignment of Fortran COMPLEX... 4 checking if Fortran 77 compiler supports DOUBLE COMPLEX... yes checking size of Fortran 77 DOUBLE COMPLEX... 16 checking alignment of Fortran DOUBLE COMPLEX... 8 checking if Fortran 77 compiler supports COMPLEX*8... yes checking size of Fortran 77 COMPLEX*8... 8 checking alignment of Fortran COMPLEX*8... 4 checking if Fortran 77 compiler supports COMPLEX*16... yes checking size of Fortran 77 COMPLEX*16... 16 checking alignment of Fortran COMPLEX*16... 8 checking if Fortran 77 compiler supports COMPLEX*32... no checking for max Fortran MPI handle index... ( 0x7fffffff < 2147483647 ? 0x7fffffff : 2147483647 ) checking Fortran value for .TRUE. logical type... 1 checking for correct handling of Fortran logical arrays... yes checking for the value of MPI_STATUS_SIZE... 5 Fortran INTEGERs checking if Fortran compiler works... yes checking whether gfortran and gfortran compilers are compatible... yes checking for extra arguments to build a shared library... none needed checking for Fortran flag to compile .f files... none checking for Fortran flag to compile .f90 files... none checking to see if F90 compiler likes the C++ exception flags... skipped (no C++ exceptions flags) checking for Fortran 90 compiler module include flag... -I checking if Fortran 90 compiler supports CHARACTER... yes checking size of Fortran 90 CHARACTER... 1 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports LOGICAL... yes checking size of Fortran 90 LOGICAL... 4 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports LOGICAL*1... yes checking size of Fortran 90 LOGICAL*1... 1 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports LOGICAL*2... yes checking size of Fortran 90 LOGICAL*2... 2 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports LOGICAL*4... yes checking size of Fortran 90 LOGICAL*4... 4 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports LOGICAL*8... yes checking size of Fortran 90 LOGICAL*8... 8 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports INTEGER... yes checking size of Fortran 90 INTEGER... 4 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports INTEGER*1... yes checking size of Fortran 90 INTEGER*1... 1 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports INTEGER*2... yes checking size of Fortran 90 INTEGER*2... 2 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports INTEGER*4... yes checking size of Fortran 90 INTEGER*4... 4 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports INTEGER*8... yes checking size of Fortran 90 INTEGER*8... 8 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports INTEGER*16... no checking if Fortran 90 compiler supports REAL... yes checking size of Fortran 90 REAL... 4 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports REAL*2... no checking if Fortran 90 compiler supports REAL*4... yes checking size of Fortran 90 REAL*4... 4 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports REAL*8... yes checking size of Fortran 90 REAL*8... 8 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports REAL*16... no checking if Fortran 90 compiler supports DOUBLE PRECISION... yes checking size of Fortran 90 DOUBLE PRECISION... 8 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports COMPLEX... yes checking size of Fortran 90 COMPLEX... 8 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports COMPLEX*8... yes checking size of Fortran 90 COMPLEX*8... 8 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports COMPLEX*16... yes checking size of Fortran 90 COMPLEX*16... 16 checking if Fortran 77 and 90 type sizes match... yes checking if Fortran 90 compiler supports COMPLEX*32... no checking if Fortran 90 compiler supports DOUBLE COMPLEX... yes checking size of Fortran 90 DOUBLE COMPLEX... 16 checking if Fortran 77 and 90 type sizes match... yes checking Fortran 90 kind of MPI_INTEGER_KIND (selected_int_kind(9))... 4 checking Fortran 90 kind of MPI_ADDRESS_KIND (selected_int_kind(9))... (cached) 4 checking Fortran 90 kind of MPI_OFFSET_KIND (selected_int_kind(18))... 8 ============================================================================ == Header file tests ============================================================================ checking alloca.h usability... yes checking alloca.h presence... yes checking for alloca.h... yes checking aio.h usability... yes checking aio.h presence... yes checking for aio.h... yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking dirent.h usability... yes checking dirent.h presence... yes checking for dirent.h... yes checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking execinfo.h usability... yes checking execinfo.h presence... yes checking for execinfo.h... yes checking err.h usability... yes checking err.h presence... yes checking for err.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking grp.h usability... yes checking grp.h presence... yes checking for grp.h... yes checking for inttypes.h... (cached) yes checking libgen.h usability... yes checking libgen.h presence... yes checking for libgen.h... yes checking libutil.h usability... no checking libutil.h presence... no checking for libutil.h... no checking for memory.h... (cached) yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking netinet/tcp.h usability... yes checking netinet/tcp.h presence... yes checking for netinet/tcp.h... yes checking poll.h usability... yes checking poll.h presence... yes checking for poll.h... yes checking pthread.h usability... yes checking pthread.h presence... yes checking for pthread.h... yes checking pty.h usability... yes checking pty.h presence... yes checking for pty.h... yes checking pwd.h usability... yes checking pwd.h presence... yes checking for pwd.h... yes checking sched.h usability... yes checking sched.h presence... yes checking for sched.h... yes checking for stdint.h... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking stropts.h usability... yes checking stropts.h presence... yes checking for stropts.h... yes checking sys/fcntl.h usability... yes checking sys/fcntl.h presence... yes checking for sys/fcntl.h... yes checking sys/ipc.h usability... yes checking sys/ipc.h presence... yes checking for sys/ipc.h... yes checking sys/shm.h usability... yes checking sys/shm.h presence... yes checking for sys/shm.h... yes checking sys/ioctl.h usability... yes checking sys/ioctl.h presence... yes checking for sys/ioctl.h... yes checking sys/mman.h usability... yes checking sys/mman.h presence... yes checking for sys/mman.h... yes checking sys/mount.h usability... yes checking sys/mount.h presence... yes checking for sys/mount.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking sys/queue.h usability... yes checking sys/queue.h presence... yes checking for sys/queue.h... yes checking sys/resource.h usability... yes checking sys/resource.h presence... yes checking for sys/resource.h... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/sockio.h usability... no checking sys/sockio.h presence... no checking for sys/sockio.h... no checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking for sys/stat.h... (cached) yes checking sys/statfs.h usability... yes checking sys/statfs.h presence... yes checking for sys/statfs.h... yes checking sys/statvfs.h usability... yes checking sys/statvfs.h presence... yes checking for sys/statvfs.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/tree.h usability... no checking sys/tree.h presence... no checking for sys/tree.h... no checking for sys/types.h... (cached) yes checking sys/uio.h usability... yes checking sys/uio.h presence... yes checking for sys/uio.h... yes checking net/uio.h usability... no checking net/uio.h presence... no checking for net/uio.h... no checking sys/utsname.h usability... yes checking sys/utsname.h presence... yes checking for sys/utsname.h... yes checking sys/vfs.h usability... yes checking sys/vfs.h presence... yes checking for sys/vfs.h... yes checking sys/wait.h usability... yes checking sys/wait.h presence... yes checking for sys/wait.h... yes checking syslog.h usability... yes checking syslog.h presence... yes checking for syslog.h... yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking termios.h usability... yes checking termios.h presence... yes checking for termios.h... yes checking ulimit.h usability... yes checking ulimit.h presence... yes checking for ulimit.h... yes checking for unistd.h... (cached) yes checking util.h usability... no checking util.h presence... no checking for util.h... no checking utmp.h usability... yes checking utmp.h presence... yes checking for utmp.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking ifaddrs.h usability... yes checking ifaddrs.h presence... yes checking for ifaddrs.h... yes checking sys/sysctl.h usability... yes checking sys/sysctl.h presence... yes checking for sys/sysctl.h... yes checking crt_externs.h usability... no checking crt_externs.h presence... no checking for crt_externs.h... no checking regex.h usability... yes checking regex.h presence... yes checking for regex.h... yes checking ioLib.h usability... no checking ioLib.h presence... no checking for ioLib.h... no checking sockLib.h usability... no checking sockLib.h presence... no checking for sockLib.h... no checking hostLib.h usability... no checking hostLib.h presence... no checking for hostLib.h... no checking shlwapi.h usability... no checking shlwapi.h presence... no checking for shlwapi.h... no checking sys/synch.h usability... no checking sys/synch.h presence... no checking for sys/synch.h... no checking for net/if.h... yes checking stdbool.h usability... yes checking stdbool.h presence... yes checking for stdbool.h... yes checking if works... yes ============================================================================ == Type tests ============================================================================ checking size of pid_t... 4 checking for socklen_t... yes checking for struct sockaddr_in... yes checking for struct sockaddr_in6... yes checking for struct sockaddr_storage... yes checking whether AF_UNSPEC is declared... yes checking whether PF_UNSPEC is declared... yes checking whether AF_INET6 is declared... yes checking whether PF_INET6 is declared... yes checking if SA_RESTART defined in signal.h... yes checking for struct sockaddr.sa_len... no checking for struct dirent.d_type... yes checking for siginfo_t.si_fd... yes checking for siginfo_t.si_band... yes ============================================================================ == Library and Function tests ============================================================================ checking if we need -lutil for openpty... yes checking for openpty... yes checking for gethostbyname in -lnsl... yes checking for socket in -lsocket... no checking if we need -lrt for sched_yield... no checking for sched_yield... yes checking if we need -lgen for dirname... no checking for dirname... yes checking if we need -lm for ceil... yes checking for ceil... yes checking for asprintf... yes checking for snprintf... yes checking for vasprintf... yes checking for vsnprintf... yes checking for openpty... (cached) yes checking for isatty... yes checking for getpwuid... yes checking for fork... yes checking for waitpid... yes checking for execve... yes checking for pipe... yes checking for ptsname... yes checking for setsid... yes checking for mmap... yes checking for tcgetpgrp... yes checking for posix_memalign... yes checking for strsignal... yes checking for sysconf... yes checking for syslog... yes checking for regcmp... no checking for regexec... yes checking for regfree... yes checking for _NSGetEnviron... no checking for socketpair... yes checking for strncpy_s... no checking for _strdup... no checking for usleep... yes checking for mkfifo... yes checking for htonl define... no checking for htonl... yes checking whether va_copy is declared... yes checking whether __va_copy is declared... yes checking whether __func__ is declared... yes ============================================================================ == System-specific tests ============================================================================ checking checking for type of MPI_Offset... long long checking checking for an MPI datatype for MPI_Offset... MPI_LONG_LONG checking for _SC_NPROCESSORS_ONLN... yes checking whether byte ordering is bigendian... no checking for broken qsort... no checking if word-sized integers must be word-size aligned... no checking if C compiler and POSIX threads work as is... no checking if C++ compiler and POSIX threads work as is... no checking if F77 compiler and POSIX threads work as is... no checking if C compiler and POSIX threads work with -Kthread... no checking if C compiler and POSIX threads work with -kthread... no checking if C compiler and POSIX threads work with -pthread... yes checking if C++ compiler and POSIX threads work with -Kthread... no checking if C++ compiler and POSIX threads work with -kthread... no checking if C++ compiler and POSIX threads work with -pthread... yes checking if F77 compiler and POSIX threads work with -Kthread... no checking if F77 compiler and POSIX threads work with -kthread... no checking if F77 compiler and POSIX threads work with -pthread... yes checking for PTHREAD_MUTEX_ERRORCHECK_NP... yes checking for PTHREAD_MUTEX_ERRORCHECK... yes checking for working POSIX threads package... yes checking if C compiler and Solaris threads work... no checking if C++ compiler and Solaris threads work... no checking if F77 compiler and Solaris threads work... no checking for working Solaris threads package... no checking for type of thread support... posix checking if threads have different pids (pthreads on linux)... no checking if want OPAL thread support... yes checking if want fault tolerance thread... yes configure: WARNING: ************************************************** configure: WARNING: *** Fault Tolerance with a thread in Open MPI * configure: WARNING: *** is an experimental, research quality option. * configure: WARNING: *** It requires OPAL thread support or progress * configure: WARNING: *** and care should be used when enabling these * configure: WARNING: *** options. * configure: WARNING: ************************************************** checking if want MPI_THREAD_MULTIPLE support... Disabled checking whether ln -s works... yes checking for grep that handles long lines and -e... (cached) /bin/grep checking for egrep... (cached) /bin/grep -E checking dependency style of gcc... (cached) none checking for flex... no checking for lex... no basename: extra operand `--run' Try `basename --help' for more information. checking for flavor of ps to use... ps -A -o fname,pid,user checking if build filesystem is case sensitive... yes checking if configuring for case sensitive filesystem... yes checking whether RLIMIT_NPROC is declared... yes checking whether RLIMIT_MEMLOCK is declared... yes ============================================================================ == Modular Component Architecture (MCA) setup ============================================================================ checking for subdir args... '--build=arm-linux-gnueabi' '--prefix=/usr' '--includedir=/usr/include' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--sysconfdir=/etc' '--localstatedir=/var' '--libexecdir=/usr/lib/openmpi1.6' '--disable-maintainer-mode' '--disable-dependency-tracking' '--enable-ft-thread' '--with-ft=cr' '--with-blcr=/usr' '--with-blcr-libdir=/usr/lib' '--with-threads=posix' '--enable-opal-multi-threads' '--with-hwloc=/usr/' '--with-libltdl=external' '--with-devel-headers' '--with-slurm' '--with-sge' '--enable-heterogeneous' '--disable-vt' '--sysconfdir=/etc/openmpi' '--libdir=/usr/lib/openmpi/lib' '--includedir=/usr/lib/openmpi/include' 'build_alias=arm-linux-gnueabi' checking for pkg-config... no ==> Pre-emptively configuring the hwloc framework to satisfy dependencies. +++ Configuring MCA framework hwloc checking for no configure components in framework hwloc... checking for m4 configure components in framework hwloc... hwloc132, external --- MCA component hwloc:hwloc132 (m4 configuration macro) checking for MCA component hwloc:hwloc132 compile mode... static checking if MCA component hwloc:hwloc132 can compile... no --- MCA component hwloc:external (m4 configuration macro) checking for MCA component hwloc:external compile mode... static checking --with-hwloc-libdir value... simple ok (unspecified) checking looking for external hwloc in... (/usr/) checking hwloc.h usability... yes checking hwloc.h presence... yes checking for hwloc.h... yes looking for library in lib checking for hwloc_topology_init in -lhwloc... yes checking if external hwloc supports XML... ./configure: line 67784: /usr//bin/lstopo: No such file or directory no checking if MCA component hwloc:external can compile... yes checking for winning hwloc component header file... /usr//include/hwloc.h checking for winning hwloc component additional CPPFLAGS... -I/usr//include checking for winning hwloc component additional LDFLAGS... -L/usr//lib checking for winning hwloc component additional LIBS... -lhwloc checking for winning hwloc component additional wrapper CPPFLAGS... none checking for winning hwloc component additional wrapper LDFLAGS... -L/usr//lib checking for winning hwloc component additional wrapper LIBS... -lhwloc configure: WARNING: Adding to (DY)LD_LIBRARY_PATH: /usr//lib <== Pre-emptive hwloc framework configuration complete. <== We now return you to your regularly scheduled programming. checking __NetBSD__... no checking __FreeBSD__... no checking __OpenBSD__... no checking __DragonFly__... no checking __386BSD__... no checking __bsdi__... no checking __APPLE__... no checking __linux__... yes checking __sun__... no checking for struct sockaddr_in... (cached) yes checking which components should be disabled... checking which components should be direct-linked into the library... checking which components should be run-time loadable... all checking which components should be static... none checking for projects containing MCA frameworks... opal, orte, ompi *** Configuring MCA for opal checking for frameworks for opal... backtrace, carto, crs, hwloc, installdirs, maffinity, memchecker, memcpy, memory, paffinity, pstat, shmem, sysinfo, timer +++ Configuring MCA framework backtrace checking for no configure components in framework backtrace... checking for m4 configure components in framework backtrace... execinfo, printstack, darwin, none --- MCA component backtrace:execinfo (m4 configuration macro) checking for MCA component backtrace:execinfo compile mode... static checking for execinfo.h... (cached) yes checking if we need -lexecinfo for backtrace... no checking for backtrace... yes checking if MCA component backtrace:execinfo can compile... yes --- MCA component backtrace:printstack (m4 configuration macro) checking for MCA component backtrace:printstack compile mode... static checking ucontext.h usability... yes checking ucontext.h presence... yes checking for ucontext.h... yes checking for printstack... no checking if MCA component backtrace:printstack can compile... no --- MCA component backtrace:darwin (m4 configuration macro) checking for MCA component backtrace:darwin compile mode... static checking for vm_read_overwrite... no checking if MCA component backtrace:darwin can compile... no --- MCA component backtrace:none (m4 configuration macro) checking for MCA component backtrace:none compile mode... static checking if MCA component backtrace:none can compile... no +++ Configuring MCA framework carto checking for no configure components in framework carto... auto_detect, file checking for m4 configure components in framework carto... --- MCA component carto:auto_detect (no configuration) checking for MCA component carto:auto_detect compile mode... dso checking if MCA component carto:auto_detect can compile... yes --- MCA component carto:file (no configuration) checking for MCA component carto:file compile mode... dso checking if MCA component carto:file can compile... yes +++ Configuring MCA framework crs checking for no configure components in framework crs... none checking for m4 configure components in framework crs... blcr, self --- MCA component crs:none (no configuration) checking for MCA component crs:none compile mode... dso checking if MCA component crs:none can compile... yes --- MCA component crs:blcr (m4 configuration macro) checking for MCA component crs:blcr compile mode... dso checking --with-blcr value... sanity check ok (/usr) checking --with-blcr-libdir value... sanity check ok (/usr/lib) checking for BLCR dir... /usr (from --with-blcr) checking for BLCR library dir... /usr/lib (from --with-blcr-libdir) looking for header without includes checking libcr.h usability... yes checking libcr.h presence... yes checking for libcr.h... yes checking for cr_init in -lcr... yes configure: WARNING: Removed -pedantic and -Wundef from CFLAGS for blcr component because libcr.h is not really ANSI C checking for BLCR working cr_request... checking if we need -lcr for cr_request_file... no checking for cr_request_file... yes checking for BLCR cr_request_checkpoint... checking if we need -lcr for cr_request_checkpoint... no checking for cr_request_checkpoint... yes checking for struct cr_checkpoint_info.requester... yes checking if MCA component crs:blcr can compile... yes --- MCA component crs:self (m4 configuration macro) checking for MCA component crs:self compile mode... dso checking for dlfcn.h... (cached) yes checking if MCA component crs:self can compile... yes +++ Configuring MCA framework installdirs checking for no configure components in framework installdirs... checking for m4 configure components in framework installdirs... env, config, windows --- MCA component installdirs:env (m4 configuration macro) checking for MCA component installdirs:env compile mode... static checking if MCA component installdirs:env can compile... yes --- MCA component installdirs:config (m4 configuration macro) checking for MCA component installdirs:config compile mode... static checking if MCA component installdirs:config can compile... yes --- MCA component installdirs:windows (m4 configuration macro) checking for MCA component installdirs:windows compile mode... static checking for working RegOpenKeyEx... no checking if MCA component installdirs:windows can compile... no +++ Configuring MCA framework maffinity checking for no configure components in framework maffinity... first_use checking for m4 configure components in framework maffinity... hwloc --- MCA component maffinity:first_use (no configuration) checking for MCA component maffinity:first_use compile mode... dso checking if MCA component maffinity:first_use can compile... yes --- MCA component maffinity:hwloc (m4 configuration macro) checking for MCA component maffinity:hwloc compile mode... dso checking if hwloc is enabled... yes checking if MCA component maffinity:hwloc can compile... yes +++ Pre-configuring the framework memchecker checking if --enable-memchecker was specified... no (adding "memchecker" to --enable-mca-no-build list) +++ Configuring MCA framework memchecker checking for no configure components in framework memchecker... checking for m4 configure components in framework memchecker... valgrind --- MCA component memchecker:valgrind (m4 configuration macro) checking for MCA component memchecker:valgrind compile mode... static checking --with-valgrind value... simple ok (unspecified) checking valgrind/valgrind.h usability... no checking valgrind/valgrind.h presence... no checking for valgrind/valgrind.h... no configure: WARNING: valgrind.h not found configure: WARNING: Cannot compile this component checking if MCA component memchecker:valgrind can compile... no +++ Configuring MCA framework memcpy checking for no configure components in framework memcpy... checking for m4 configure components in framework memcpy... +++ Configuring MCA framework memory checking for no configure components in framework memory... checking for m4 configure components in framework memory... linux, malloc_solaris --- MCA component memory:linux (m4 configuration macro) checking for MCA component memory:linux compile mode... static checking operating system... arm-unknown-linux-gnueabi -- supported checking for malloc.h... (cached) yes checking whether __malloc_initialize_hook is declared... yes checking whether sbrk is declared... yes checking syscall.h usability... yes checking syscall.h presence... yes checking for syscall.h... yes checking for syscall... yes checking for __munmap... no checking for __mmap... no checking for dlsym in -ldl... yes checking for dlsym... yes checking linux/ummunotify.h usability... no checking linux/ummunotify.h presence... no checking for linux/ummunotify.h... no checking for stropts.h... (cached) yes checking if MCA component memory:linux can compile... yes --- MCA component memory:malloc_solaris (m4 configuration macro) checking for MCA component memory:malloc_solaris compile mode... static checking for Solaris... no checking if MCA component memory:malloc_solaris can compile... no +++ Configuring MCA framework paffinity checking for no configure components in framework paffinity... checking for m4 configure components in framework paffinity... hwloc, test --- MCA component paffinity:hwloc (m4 configuration macro) checking for MCA component paffinity:hwloc compile mode... dso checking if hwloc is enabled... yes checking if MCA component paffinity:hwloc can compile... yes --- MCA component paffinity:test (m4 configuration macro) checking for MCA component paffinity:test compile mode... dso checking if this is an --enable-debug build... no (component disabled) checking if MCA component paffinity:test can compile... no +++ Configuring MCA framework pstat checking for no configure components in framework pstat... checking for m4 configure components in framework pstat... linux, darwin --- MCA component pstat:linux (m4 configuration macro) checking for MCA component pstat:linux compile mode... dso checking if MCA component pstat:linux can compile... no --- MCA component pstat:darwin (m4 configuration macro) checking for MCA component pstat:darwin compile mode... dso checking mach/mach_host.h usability... no checking mach/mach_host.h presence... no checking for mach/mach_host.h... no checking if MCA component pstat:darwin can compile... no +++ Configuring MCA framework shmem checking for no configure components in framework shmem... checking for m4 configure components in framework shmem... mmap, posix, sysv, windows --- MCA component shmem:mmap (m4 configuration macro) checking for MCA component shmem:mmap compile mode... dso checking if want mmap shared memory support... yes checking for library containing mmap... none required checking if MCA component shmem:mmap can compile... yes --- MCA component shmem:posix (m4 configuration macro) checking for MCA component shmem:posix compile mode... dso checking if want POSIX shared memory support... yes checking for library containing shm_open... -lrt checking if MCA component shmem:posix can compile... yes --- MCA component shmem:sysv (m4 configuration macro) checking for MCA component shmem:sysv compile mode... dso checking if want SYSV shared memory support... yes checking for shmget... yes checking if MCA component shmem:sysv can compile... yes --- MCA component shmem:windows (m4 configuration macro) checking for MCA component shmem:windows compile mode... dso checking if want Windows shared memory support... yes checking for CreateFileMapping... no checking if MCA component shmem:windows can compile... no +++ Configuring MCA framework sysinfo checking for no configure components in framework sysinfo... checking for m4 configure components in framework sysinfo... linux, solaris, darwin --- MCA component sysinfo:linux (m4 configuration macro) checking for MCA component sysinfo:linux compile mode... dso checking if we are on Linux... yes checking if MCA component sysinfo:linux can compile... yes --- MCA component sysinfo:solaris (m4 configuration macro) checking for MCA component sysinfo:solaris compile mode... dso configure: *** Open MPI does not support solaris sysinfo on this platform checking if MCA component sysinfo:solaris can compile... no --- MCA component sysinfo:darwin (m4 configuration macro) checking for MCA component sysinfo:darwin compile mode... dso checking for mach/mach_host.h... (cached) no checking if MCA component sysinfo:darwin can compile... no +++ Configuring MCA framework timer checking for no configure components in framework timer... checking for m4 configure components in framework timer... altix, catamount, aix, darwin, solaris, windows, linux --- MCA component timer:altix (m4 configuration macro) checking for MCA component timer:altix compile mode... static checking sn/mmtimer.h usability... no checking sn/mmtimer.h presence... no checking for sn/mmtimer.h... no checking if MCA component timer:altix can compile... no --- MCA component timer:catamount (m4 configuration macro) checking for MCA component timer:catamount compile mode... static checking catamount/dclock.h usability... no checking catamount/dclock.h presence... no checking for catamount/dclock.h... no checking if MCA component timer:catamount can compile... no --- MCA component timer:aix (m4 configuration macro) checking for MCA component timer:aix compile mode... static checking for time_base_to_time... no checking if MCA component timer:aix can compile... no --- MCA component timer:darwin (m4 configuration macro) checking for MCA component timer:darwin compile mode... static checking mach/mach_time.h usability... no checking mach/mach_time.h presence... no checking for mach/mach_time.h... no checking for mach_absolute_time... no checking if MCA component timer:darwin can compile... no --- MCA component timer:solaris (m4 configuration macro) checking for MCA component timer:solaris compile mode... static checking for gethrtime... no checking if MCA component timer:solaris can compile... no --- MCA component timer:windows (m4 configuration macro) checking for MCA component timer:windows compile mode... static checking if MCA component timer:windows can compile... no --- MCA component timer:linux (m4 configuration macro) checking for MCA component timer:linux compile mode... static checking if MCA component timer:linux can compile... no *** Configuring MCA for orte checking for frameworks for orte... errmgr, ess, filem, grpcomm, iof, notifier, odls, oob, plm, ras, rmaps, rml, routed, snapc +++ Configuring MCA framework errmgr checking for no configure components in framework errmgr... default checking for m4 configure components in framework errmgr... --- MCA component errmgr:default (no configuration) checking for MCA component errmgr:default compile mode... dso checking if MCA component errmgr:default can compile... yes +++ Configuring MCA framework ess checking for no configure components in framework ess... checking for m4 configure components in framework ess... portals_utcp, cnos, alps, env, hnp, lsf, pmi, singleton, slave, slurm, slurmd, tm, tool --- MCA component ess:portals_utcp (m4 configuration macro) checking for MCA component ess:portals_utcp compile mode... dso checking --with-portals value... simple ok (unspecified) checking for PtlGetRank... no checking if MCA component ess:portals_utcp can compile... no --- MCA component ess:cnos (m4 configuration macro) checking for MCA component ess:cnos compile mode... dso checking for cnos_get_rank... no checking if MCA component ess:cnos can compile... no --- MCA component ess:alps (m4 configuration macro) checking for MCA component ess:alps compile mode... dso checking for catamount/cnos_mpi_os.h... no checking for cnos_mpi_os.h... no checking if MCA component ess:alps can compile... no --- MCA component ess:env (m4 configuration macro) checking for MCA component ess:env compile mode... dso checking if MCA component ess:env can compile... yes --- MCA component ess:hnp (m4 configuration macro) checking for MCA component ess:hnp compile mode... dso checking if MCA component ess:hnp can compile... yes --- MCA component ess:lsf (m4 configuration macro) checking for MCA component ess:lsf compile mode... dso checking --with-lsf value... simple ok (unspecified) checking --with-lsf-libdir value... simple ok (unspecified) checking for LSF dir... compiler default checking for LSF library dir... linker default checking lsf/lsbatch.h usability... no checking lsf/lsbatch.h presence... no checking for lsf/lsbatch.h... no checking if MCA component ess:lsf can compile... no --- MCA component ess:pmi (m4 configuration macro) checking for MCA component ess:pmi compile mode... dso checking if user requested PMI support... no checking if MCA component ess:pmi can compile... no --- MCA component ess:singleton (m4 configuration macro) checking for MCA component ess:singleton compile mode... dso checking if MCA component ess:singleton can compile... yes --- MCA component ess:slave (m4 configuration macro) checking for MCA component ess:slave compile mode... dso checking if MCA component ess:slave can compile... yes --- MCA component ess:slurm (m4 configuration macro) checking for MCA component ess:slurm compile mode... dso checking for fork... (cached) yes checking for execve... (cached) yes checking for setpgid... yes checking if MCA component ess:slurm can compile... yes --- MCA component ess:slurmd (m4 configuration macro) checking for MCA component ess:slurmd compile mode... dso checking for fork... (cached) yes checking for execve... (cached) yes checking for setpgid... (cached) yes checking if MCA component ess:slurmd can compile... yes --- MCA component ess:tm (m4 configuration macro) checking for MCA component ess:tm compile mode... dso checking --with-tm value... simple ok (unspecified) checking for pbs-config... pbs-config checking tm.h usability... yes checking tm.h presence... yes checking for tm.h... yes checking for tm_finalize... yes checking if MCA component ess:tm can compile... yes --- MCA component ess:tool (m4 configuration macro) checking for MCA component ess:tool compile mode... dso checking if MCA component ess:tool can compile... yes +++ Configuring MCA framework filem checking for no configure components in framework filem... rsh checking for m4 configure components in framework filem... --- MCA component filem:rsh (no configuration) checking for MCA component filem:rsh compile mode... dso checking if MCA component filem:rsh can compile... yes +++ Configuring MCA framework grpcomm checking for no configure components in framework grpcomm... checking for m4 configure components in framework grpcomm... cnos, bad, basic, hier, pmi --- MCA component grpcomm:cnos (m4 configuration macro) checking for MCA component grpcomm:cnos compile mode... dso checking for cnos_barrier... no checking if MCA component grpcomm:cnos can compile... no --- MCA component grpcomm:bad (m4 configuration macro) checking for MCA component grpcomm:bad compile mode... dso checking if MCA component grpcomm:bad can compile... yes --- MCA component grpcomm:basic (m4 configuration macro) checking for MCA component grpcomm:basic compile mode... dso checking if MCA component grpcomm:basic can compile... yes --- MCA component grpcomm:hier (m4 configuration macro) checking for MCA component grpcomm:hier compile mode... dso checking if MCA component grpcomm:hier can compile... yes --- MCA component grpcomm:pmi (m4 configuration macro) checking for MCA component grpcomm:pmi compile mode... dso checking if user requested PMI support... no checking if MCA component grpcomm:pmi can compile... no +++ Configuring MCA framework iof checking for no configure components in framework iof... hnp, orted, tool checking for m4 configure components in framework iof... --- MCA component iof:hnp (no configuration) checking for MCA component iof:hnp compile mode... dso checking if MCA component iof:hnp can compile... yes --- MCA component iof:orted (no configuration) checking for MCA component iof:orted compile mode... dso checking if MCA component iof:orted can compile... yes --- MCA component iof:tool (no configuration) checking for MCA component iof:tool compile mode... dso checking if MCA component iof:tool can compile... yes +++ Configuring MCA framework notifier checking for no configure components in framework notifier... checking for m4 configure components in framework notifier... command, ftb, smtp, syslog --- MCA component notifier:command (m4 configuration macro) checking for MCA component notifier:command compile mode... dso checking for fork... (cached) yes checking for pipe... (cached) yes checking if MCA component notifier:command can compile... yes --- MCA component notifier:ftb (m4 configuration macro) checking for MCA component notifier:ftb compile mode... dso checking libftb.h usability... no checking libftb.h presence... no checking for libftb.h... no checking if MCA component notifier:ftb can compile... no --- MCA component notifier:smtp (m4 configuration macro) checking for MCA component notifier:smtp compile mode... dso checking --with-esmtp value... simple ok (unspecified) checking --with-esmtp-libdir value... simple ok (unspecified) checking libesmtp.h usability... no checking libesmtp.h presence... no checking for libesmtp.h... no checking if MCA component notifier:smtp can compile... no --- MCA component notifier:syslog (m4 configuration macro) checking for MCA component notifier:syslog compile mode... dso checking if MCA component notifier:syslog can compile... yes +++ Configuring MCA framework odls checking for no configure components in framework odls... checking for m4 configure components in framework odls... default, process --- MCA component odls:default (m4 configuration macro) checking for MCA component odls:default compile mode... dso checking for fork... (cached) yes checking if MCA component odls:default can compile... yes --- MCA component odls:process (m4 configuration macro) checking for MCA component odls:process compile mode... dso checking for CreateProcess... no checking if MCA component odls:process can compile... no +++ Configuring MCA framework oob checking for no configure components in framework oob... checking for m4 configure components in framework oob... tcp --- MCA component oob:tcp (m4 configuration macro) checking for MCA component oob:tcp compile mode... dso checking for struct sockaddr_in... (cached) yes checking if MCA component oob:tcp can compile... yes +++ Configuring MCA framework plm checking for no configure components in framework plm... checking for m4 configure components in framework plm... alps, ccp, lsf, process, rsh, slurm, tm --- MCA component plm:alps (m4 configuration macro) checking for MCA component plm:alps compile mode... dso checking if MCA component plm:alps can compile... no --- MCA component plm:ccp (m4 configuration macro) checking for MCA component plm:ccp compile mode... dso checking if MCA component plm:ccp can compile... no --- MCA component plm:lsf (m4 configuration macro) checking for MCA component plm:lsf compile mode... dso checking --with-lsf value... simple ok (unspecified) checking --with-lsf-libdir value... simple ok (unspecified) checking for LSF dir... compiler default checking for LSF library dir... linker default checking lsf/lsbatch.h usability... no checking lsf/lsbatch.h presence... no checking for lsf/lsbatch.h... no checking if MCA component plm:lsf can compile... no --- MCA component plm:process (m4 configuration macro) checking for MCA component plm:process compile mode... dso checking if MCA component plm:process can compile... no --- MCA component plm:rsh (m4 configuration macro) checking for MCA component plm:rsh compile mode... dso checking for fork... (cached) yes checking if MCA component plm:rsh can compile... yes --- MCA component plm:slurm (m4 configuration macro) checking for MCA component plm:slurm compile mode... dso checking for fork... (cached) yes checking for execve... (cached) yes checking for setpgid... (cached) yes checking if MCA component plm:slurm can compile... yes --- MCA component plm:tm (m4 configuration macro) checking for MCA component plm:tm compile mode... dso checking --with-tm value... simple ok (unspecified) checking for pbs-config... pbs-config checking for tm.h... (cached) yes checking for tm_finalize... (cached) yes checking if MCA component plm:tm can compile... yes +++ Configuring MCA framework ras checking for no configure components in framework ras... cm checking for m4 configure components in framework ras... alps, ccp, gridengine, loadleveler, lsf, slurm, tm --- MCA component ras:cm (no configuration) checking for MCA component ras:cm compile mode... dso checking if MCA component ras:cm can compile... yes --- MCA component ras:alps (m4 configuration macro) checking for MCA component ras:alps compile mode... dso checking if MCA component ras:alps can compile... no --- MCA component ras:ccp (m4 configuration macro) checking for MCA component ras:ccp compile mode... dso checking if MCA component ras:ccp can compile... no --- MCA component ras:gridengine (m4 configuration macro) checking for MCA component ras:gridengine compile mode... dso checking if user requested SGE build... yes checking if MCA component ras:gridengine can compile... yes --- MCA component ras:loadleveler (m4 configuration macro) checking for MCA component ras:loadleveler compile mode... dso checking if MCA component ras:loadleveler can compile... yes --- MCA component ras:lsf (m4 configuration macro) checking for MCA component ras:lsf compile mode... dso checking --with-lsf value... simple ok (unspecified) checking --with-lsf-libdir value... simple ok (unspecified) checking for LSF dir... compiler default checking for LSF library dir... linker default checking lsf/lsbatch.h usability... no checking lsf/lsbatch.h presence... no checking for lsf/lsbatch.h... no checking if MCA component ras:lsf can compile... no --- MCA component ras:slurm (m4 configuration macro) checking for MCA component ras:slurm compile mode... dso checking for fork... (cached) yes checking for execve... (cached) yes checking for setpgid... (cached) yes checking if MCA component ras:slurm can compile... yes --- MCA component ras:tm (m4 configuration macro) checking for MCA component ras:tm compile mode... dso checking --with-tm value... simple ok (unspecified) checking for pbs-config... pbs-config checking for tm.h... (cached) yes checking for tm_finalize... (cached) yes checking if MCA component ras:tm can compile... yes +++ Configuring MCA framework rmaps checking for no configure components in framework rmaps... load_balance, rank_file, resilient, round_robin, seq, topo checking for m4 configure components in framework rmaps... --- MCA component rmaps:load_balance (no configuration) checking for MCA component rmaps:load_balance compile mode... dso checking if MCA component rmaps:load_balance can compile... yes --- MCA component rmaps:rank_file (no configuration) checking for MCA component rmaps:rank_file compile mode... dso checking if MCA component rmaps:rank_file can compile... yes --- MCA component rmaps:resilient (no configuration) checking for MCA component rmaps:resilient compile mode... dso checking if MCA component rmaps:resilient can compile... yes --- MCA component rmaps:round_robin (no configuration) checking for MCA component rmaps:round_robin compile mode... dso checking if MCA component rmaps:round_robin can compile... yes --- MCA component rmaps:seq (no configuration) checking for MCA component rmaps:seq compile mode... dso checking if MCA component rmaps:seq can compile... yes --- MCA component rmaps:topo (no configuration) checking for MCA component rmaps:topo compile mode... dso checking if MCA component rmaps:topo can compile... yes +++ Configuring MCA framework rml checking for no configure components in framework rml... oob checking for m4 configure components in framework rml... ftrm --- MCA component rml:oob (no configuration) checking for MCA component rml:oob compile mode... dso checking if MCA component rml:oob can compile... yes --- MCA component rml:ftrm (m4 configuration macro) checking for MCA component rml:ftrm compile mode... dso checking if MCA component rml:ftrm can compile... yes +++ Configuring MCA framework routed checking for no configure components in framework routed... binomial, cm, direct, linear, radix, slave checking for m4 configure components in framework routed... --- MCA component routed:binomial (no configuration) checking for MCA component routed:binomial compile mode... dso checking if MCA component routed:binomial can compile... yes --- MCA component routed:cm (no configuration) checking for MCA component routed:cm compile mode... dso checking if MCA component routed:cm can compile... yes --- MCA component routed:direct (no configuration) checking for MCA component routed:direct compile mode... dso checking if MCA component routed:direct can compile... yes --- MCA component routed:linear (no configuration) checking for MCA component routed:linear compile mode... dso checking if MCA component routed:linear can compile... yes --- MCA component routed:radix (no configuration) checking for MCA component routed:radix compile mode... dso checking if MCA component routed:radix can compile... yes --- MCA component routed:slave (no configuration) checking for MCA component routed:slave compile mode... dso checking if MCA component routed:slave can compile... yes +++ Configuring MCA framework snapc checking for no configure components in framework snapc... checking for m4 configure components in framework snapc... full --- MCA component snapc:full (m4 configuration macro) checking for MCA component snapc:full compile mode... dso checking if MCA component snapc:full can compile... yes *** Configuring MCA for ompi checking for frameworks for ompi... allocator, bml, btl, coll, common, crcp, dpm, io, mpool, mtl, op, osc, pml, pubsub, rcache, topo +++ Configuring MCA framework allocator checking for no configure components in framework allocator... basic, bucket checking for m4 configure components in framework allocator... --- MCA component allocator:basic (no configuration) checking for MCA component allocator:basic compile mode... dso checking if MCA component allocator:basic can compile... yes --- MCA component allocator:bucket (no configuration) checking for MCA component allocator:bucket compile mode... dso checking if MCA component allocator:bucket can compile... yes +++ Configuring MCA framework bml checking for no configure components in framework bml... r2 checking for m4 configure components in framework bml... --- MCA component bml:r2 (no configuration) checking for MCA component bml:r2 compile mode... dso checking if MCA component bml:r2 can compile... yes +++ Configuring MCA framework btl checking for no configure components in framework btl... self checking for m4 configure components in framework btl... elan, mx, ofud, openib, portals, sctp, sm, tcp, udapl --- MCA component btl:self (no configuration) checking for MCA component btl:self compile mode... dso checking if MCA component btl:self can compile... yes --- MCA component btl:elan (m4 configuration macro) checking for MCA component btl:elan compile mode... dso checking --with-elan value... simple ok (unspecified) checking --with-elan-libdir value... simple ok (unspecified) checking elan/elan.h usability... no checking elan/elan.h presence... no checking for elan/elan.h... no checking if MCA component btl:elan can compile... no --- MCA component btl:mx (m4 configuration macro) checking for MCA component btl:mx compile mode... dso checking --with-mx value... simple ok (unspecified) checking --with-mx-libdir value... simple ok (unspecified) checking myriexpress.h usability... no checking myriexpress.h presence... no checking for myriexpress.h... no checking if MCA component btl:mx can compile... no --- MCA component btl:ofud (m4 configuration macro) checking for MCA component btl:ofud compile mode... dso checking --with-openib value... simple ok (unspecified) checking --with-openib-libdir value... simple ok (unspecified) checking if want to add padding to the openib control header... no checking for fcntl.h... (cached) yes checking sys/poll.h usability... yes checking sys/poll.h presence... yes checking for sys/poll.h... yes checking infiniband/verbs.h usability... yes checking infiniband/verbs.h presence... yes checking for infiniband/verbs.h... yes looking for library without search path checking for ibv_open_device in -libverbs... yes checking number of arguments to ibv_create_cq... 5 checking whether IBV_EVENT_CLIENT_REREGISTER is declared... yes checking whether IBV_ACCESS_SO is declared... no checking for ibv_get_device_list... yes checking for ibv_resize_cq... yes checking for struct ibv_device.transport_type... yes checking for ibv_create_xrc_rcv_qp... no checking infiniband/complib/cl_types_osd.h usability... no checking infiniband/complib/cl_types_osd.h presence... no checking for infiniband/complib/cl_types_osd.h... no checking if can use dynamic SL support... no checking rdma/rdma_cma.h usability... no checking rdma/rdma_cma.h presence... no checking for rdma/rdma_cma.h... no checking whether IBV_LINK_LAYER_ETHERNET is declared... yes checking if RDMAoE support is enabled... yes checking for infiniband/driver.h... yes checking if ConnectX XRC support is enabled... no checking if dynamic SL is enabled... no checking if OpenFabrics RDMACM support is enabled... no checking if MCA component btl:ofud can compile... yes --- MCA component btl:openib (m4 configuration macro) checking for MCA component btl:openib compile mode... dso checking --with-openib value... simple ok (unspecified) checking --with-openib-libdir value... simple ok (unspecified) checking if want to add padding to the openib control header... no checking for fcntl.h... (cached) yes checking for sys/poll.h... (cached) yes checking infiniband/verbs.h usability... yes checking infiniband/verbs.h presence... yes checking for infiniband/verbs.h... yes looking for library without search path checking for ibv_open_device in -libverbs... yes checking number of arguments to ibv_create_cq... (cached) 5 checking whether IBV_EVENT_CLIENT_REREGISTER is declared... (cached) yes checking whether IBV_ACCESS_SO is declared... (cached) no checking for ibv_get_device_list... (cached) yes checking for ibv_resize_cq... (cached) yes checking for struct ibv_device.transport_type... (cached) yes checking for ibv_create_xrc_rcv_qp... (cached) no checking for infiniband/complib/cl_types_osd.h... (cached) no checking if can use dynamic SL support... no checking for rdma/rdma_cma.h... (cached) no checking whether IBV_LINK_LAYER_ETHERNET is declared... (cached) yes checking if RDMAoE support is enabled... yes checking for infiniband/driver.h... (cached) yes checking if ConnectX XRC support is enabled... no checking if dynamic SL is enabled... no checking if OpenFabrics RDMACM support is enabled... no checking for ibv_fork_init... yes checking for thread support (needed for rdmacm)... posix checking which openib btl cpcs will be built... oob checking whether openib failover is enabled... no checking for malloc.h... (cached) yes checking for __malloc_hook... yes checking for __realloc_hook... yes checking for __free_hook... yes checking whether the openib BTL will use malloc hooks... yes checking if MCA component btl:openib can compile... yes --- MCA component btl:portals (m4 configuration macro) checking for MCA component btl:portals compile mode... dso checking --with-portals value... simple ok (unspecified) checking for Portals configuration... utcp checking portals3.h usability... no checking portals3.h presence... no checking for portals3.h... no checking for catamount/cnos_mpi_os.h... (cached) no checking for cnos_mpi_os.h... (cached) no checking if MCA component btl:portals can compile... no --- MCA component btl:sctp (m4 configuration macro) checking for MCA component btl:sctp compile mode... dso checking --with-sctp value... simple ok (unspecified) checking --with-sctp-libdir value... simple ok (unspecified) checking for netinet/in.h... (cached) yes checking for netinet/sctp.h... no checking if MCA component btl:sctp can compile... no --- MCA component btl:sm (m4 configuration macro) checking for MCA component btl:sm compile mode... dso checking --with-knem value... simple ok (unspecified) checking knem_io.h usability... no checking knem_io.h presence... no checking for knem_io.h... no checking if MCA component btl:sm can compile... yes --- MCA component btl:tcp (m4 configuration macro) checking for MCA component btl:tcp compile mode... dso checking for struct sockaddr_in... (cached) yes checking if MCA component btl:tcp can compile... yes --- MCA component btl:udapl (m4 configuration macro) checking for MCA component btl:udapl compile mode... dso checking --with-udapl value... simple ok (unspecified) checking --with-udapl-libdir value... simple ok (unspecified) configure: WARNING: On Linux and --with-udapl was not specified configure: WARNING: Not building the udapl BTL checking if MCA component btl:udapl can compile... no +++ Configuring MCA framework coll checking for no configure components in framework coll... basic, hierarch, inter, self, sm, sync, tuned checking for m4 configure components in framework coll... fca --- MCA component coll:basic (no configuration) checking for MCA component coll:basic compile mode... dso checking if MCA component coll:basic can compile... yes --- MCA component coll:hierarch (no configuration) checking for MCA component coll:hierarch compile mode... dso checking if MCA component coll:hierarch can compile... yes --- MCA component coll:inter (no configuration) checking for MCA component coll:inter compile mode... dso checking if MCA component coll:inter can compile... yes --- MCA component coll:self (no configuration) checking for MCA component coll:self compile mode... dso checking if MCA component coll:self can compile... yes --- MCA component coll:sm (no configuration) checking for MCA component coll:sm compile mode... dso checking if MCA component coll:sm can compile... yes --- MCA component coll:sync (no configuration) checking for MCA component coll:sync compile mode... dso checking if MCA component coll:sync can compile... yes --- MCA component coll:tuned (no configuration) checking for MCA component coll:tuned compile mode... dso checking if MCA component coll:tuned can compile... yes --- MCA component coll:fca (m4 configuration macro) checking for MCA component coll:fca compile mode... dso checking --with-fca value... simple ok (unspecified) checking if MCA component coll:fca can compile... no +++ Configuring MCA framework common checking for no configure components in framework common... sm checking for m4 configure components in framework common... mx, portals --- MCA component common:sm (no configuration) checking for MCA component common:sm compile mode... dso checking if MCA component common:sm can compile... yes --- MCA component common:mx (m4 configuration macro) checking for MCA component common:mx compile mode... dso checking --with-mx value... simple ok (unspecified) checking --with-mx-libdir value... simple ok (unspecified) checking myriexpress.h usability... no checking myriexpress.h presence... no checking for myriexpress.h... no checking if MCA component common:mx can compile... no --- MCA component common:portals (m4 configuration macro) checking for MCA component common:portals compile mode... dso checking --with-portals value... simple ok (unspecified) checking for Portals configuration... utcp checking for portals3.h... (cached) no checking if MCA component common:portals can compile... no +++ Configuring MCA framework crcp checking for no configure components in framework crcp... checking for m4 configure components in framework crcp... bkmrk --- MCA component crcp:bkmrk (m4 configuration macro) checking for MCA component crcp:bkmrk compile mode... dso checking if MCA component crcp:bkmrk can compile... yes +++ Configuring MCA framework dpm checking for no configure components in framework dpm... orte checking for m4 configure components in framework dpm... --- MCA component dpm:orte (no configuration) checking for MCA component dpm:orte compile mode... dso checking if MCA component dpm:orte can compile... yes +++ Configuring MCA framework io checking for no configure components in framework io... checking for m4 configure components in framework io... romio --- MCA component io:romio (m4 configuration macro) checking for MCA component io:romio compile mode... dso checking if want ROMIO component... yes checking if MPI profiling is enabled... yes *** Configuring ROMIO distribution configure: OMPI configuring in ompi/mca/io/romio/romio configure: running /bin/bash './configure' CFLAGS="-DNDEBUG -g -O2 -finline-functions -fno-strict-aliasing -pthread" CPPFLAGS=" -I/usr//include -I/usr/include/infiniband -I/usr/include/infiniband" FFLAGS="" LDFLAGS=" -L/usr//lib" --enable-shared --disable-static --prefix=/usr --with-mpi=open_mpi --disable-aio --cache-file=/dev/null --srcdir=. --disable-option-checking Configuring with args CFLAGS=-DNDEBUG -g -O2 -finline-functions -fno-strict-aliasing -pthread CPPFLAGS= -I/usr//include -I/usr/include/infiniband -I/usr/include/infiniband FFLAGS= LDFLAGS= -L/usr//lib --enable-shared --disable-static --prefix=/usr --with-mpi=open_mpi --disable-aio --cache-file=/dev/null --srcdir=. --disable-option-checking checking for Open MPI support files... in Open MPI source tree -- good ./configure: line 2805: PAC_PROG_MAKE: command not found checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for architecture... LINUX configure: WARNING: Unknown architecture ... proceeding anyway ROMIO home directory is /build/buildd/openmpi1.6-1.6.1/ompi/mca/io/romio/romio checking for ranlib... ranlib ./configure: line 3688: PAC_PROG_CC: command not found checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E ./configure: line 5015: PAC_GET_SPECIAL_SYSTEM_INFO: command not found checking for memalign... yes checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for unistd.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for sys/types.h... (cached) yes checking for u_char... yes checking for u_short... yes checking for u_int... yes checking for u_long... yes checking sys/attr.h usability... no checking sys/attr.h presence... no checking for sys/attr.h... no checking size of int... 4 checking size of void *... 4 checking for int large enough for pointers... yes checking size of long long... 8 checking whether struct flock compatible with MPI_Offset... yes checking for pvfs2-config... notfound checking configured file systems... testfs ufs nfs configure: WARNING: File locks may not work with NFS. See the Installation and users manual for instructions on testing and if necessary fixing this checking sys/vfs.h usability... yes checking sys/vfs.h presence... yes checking for sys/vfs.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking sys/mount.h usability... yes checking sys/mount.h presence... yes checking for sys/mount.h... yes checking sys/statvfs.h usability... yes checking sys/statvfs.h presence... yes checking for sys/statvfs.h... yes checking whether struct statfs properly defined... yes checking for f_fstypename member of statfs structure... no checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for stat... yes checking for st_fstype member of stat structure... no checking for sys/types.h... (cached) yes checking for sys/statvfs.h... (cached) yes checking for sys/vfs.h... (cached) yes checking for statvfs... yes checking for f_basetype member of statvfs structure... no checking for unistd.h... (cached) yes checking for large file defines... yes checking whether off64_t is an scalar type... yes checking for strerror... yes checking for doctext... no checking for strdup... yes ./configure: line 7908: syntax error near unexpected token `newline' ./configure: line 7908: ` PAC_FUNC_NEEDS_DECL(#include ,strdup)' configure: /bin/bash './configure' *failed* for ompi/mca/io/romio/romio configure: WARNING: ROMIO distribution did not configure successfully checking if MCA component io:romio can compile... no +++ Configuring MCA framework mpool checking for no configure components in framework mpool... fake, rdma, sm checking for m4 configure components in framework mpool... --- MCA component mpool:fake (no configuration) checking for MCA component mpool:fake compile mode... dso checking if MCA component mpool:fake can compile... yes --- MCA component mpool:rdma (no configuration) checking for MCA component mpool:rdma compile mode... dso checking if MCA component mpool:rdma can compile... yes --- MCA component mpool:sm (no configuration) checking for MCA component mpool:sm compile mode... dso checking if MCA component mpool:sm can compile... yes +++ Configuring MCA framework mtl checking for no configure components in framework mtl... checking for m4 configure components in framework mtl... mx, mxm, portals, psm --- MCA component mtl:mx (m4 configuration macro) checking for MCA component mtl:mx compile mode... dso checking --with-mx value... simple ok (unspecified) checking --with-mx-libdir value... simple ok (unspecified) checking myriexpress.h usability... no checking myriexpress.h presence... no checking for myriexpress.h... no checking if MCA component mtl:mx can compile... no --- MCA component mtl:mxm (m4 configuration macro) checking for MCA component mtl:mxm compile mode... dso checking --with-mxm value... simple ok (unspecified) checking --with-mxm-libdir value... simple ok (unspecified) checking mxm/api/mxm_api.h usability... no checking mxm/api/mxm_api.h presence... no checking for mxm/api/mxm_api.h... no checking if MCA component mtl:mxm can compile... no --- MCA component mtl:portals (m4 configuration macro) checking for MCA component mtl:portals compile mode... dso checking --with-portals value... simple ok (unspecified) checking for Portals configuration... utcp checking for portals3.h... (cached) no checking if MCA component mtl:portals can compile... no --- MCA component mtl:psm (m4 configuration macro) checking for MCA component mtl:psm compile mode... dso checking --with-psm value... simple ok (unspecified) checking --with-psm-libdir value... simple ok (unspecified) checking psm.h usability... no checking psm.h presence... no checking for psm.h... no checking if MCA component mtl:psm can compile... no +++ Configuring MCA framework op checking for no configure components in framework op... checking for m4 configure components in framework op... +++ Configuring MCA framework osc checking for no configure components in framework osc... pt2pt, rdma checking for m4 configure components in framework osc... --- MCA component osc:pt2pt (no configuration) checking for MCA component osc:pt2pt compile mode... dso checking if MCA component osc:pt2pt can compile... yes --- MCA component osc:rdma (no configuration) checking for MCA component osc:rdma compile mode... dso checking if MCA component osc:rdma can compile... yes +++ Configuring MCA framework pml checking for no configure components in framework pml... bfo, cm, csum, ob1 checking for m4 configure components in framework pml... crcpw, v --- MCA component pml:bfo (no configuration) checking for MCA component pml:bfo compile mode... dso checking if MCA component pml:bfo can compile... yes --- MCA component pml:cm (no configuration) checking for MCA component pml:cm compile mode... dso checking if MCA component pml:cm can compile... yes --- MCA component pml:csum (no configuration) checking for MCA component pml:csum compile mode... dso checking if MCA component pml:csum can compile... yes --- MCA component pml:ob1 (no configuration) checking for MCA component pml:ob1 compile mode... dso checking if MCA component pml:ob1 can compile... yes --- MCA component pml:crcpw (m4 configuration macro) checking for MCA component pml:crcpw compile mode... dso checking if MCA component pml:crcpw can compile... yes --- MCA component pml:v (m4 configuration macro) checking for MCA component pml:v compile mode... dso +++ Configuring MCA framework vprotocol checking for no configure components in framework vprotocol... pessimist checking for m4 configure components in framework vprotocol... --- MCA component vprotocol:pessimist (no configuration) checking for MCA component vprotocol:pessimist compile mode... dso checking if MCA component vprotocol:pessimist can compile... yes checking if MCA component pml:v can compile... yes +++ Configuring MCA framework pubsub checking for no configure components in framework pubsub... orte checking for m4 configure components in framework pubsub... pmi --- MCA component pubsub:orte (no configuration) checking for MCA component pubsub:orte compile mode... dso checking if MCA component pubsub:orte can compile... yes --- MCA component pubsub:pmi (m4 configuration macro) checking for MCA component pubsub:pmi compile mode... dso checking if user requested PMI support... no checking if MCA component pubsub:pmi can compile... no +++ Configuring MCA framework rcache checking for no configure components in framework rcache... vma checking for m4 configure components in framework rcache... --- MCA component rcache:vma (no configuration) checking for MCA component rcache:vma compile mode... dso checking if MCA component rcache:vma can compile... yes +++ Configuring MCA framework topo checking for no configure components in framework topo... unity checking for m4 configure components in framework topo... --- MCA component topo:unity (no configuration) checking for MCA component topo:unity compile mode... dso checking if MCA component topo:unity can compile... yes ============================================================================ == Extended MPI interfaces setup ============================================================================ checking which extension components should be enabled... checking for projects containing EXT frameworks... ompi *** Configuring EXT for ompi checking for frameworks for ompi... mpiext +++ Configuring EXT framework mpiext checking for no configure components in framework mpiext... checking for m4 configure components in framework mpiext... affinity, example --- EXT component mpiext:affinity (m4 configuration macro) checking if EXT component mpiext:affinity can compile... no --- EXT component mpiext:example (m4 configuration macro) checking if EXT component mpiext:example can compile... no ============================================================================ == Contributed software setup ============================================================================ *** Configuring contributed software packages checking which contributed software packages should be disabled... --- libompitrace (m4 configuration macro) checking if contributed component libompitrace can compile... yes --- vt (m4 configuration macro) configure: disabled via command line switch ============================================================================ == Symbol visibility feature ============================================================================ checking if gcc supports -fvisibility=hidden... yes checking whether to enable symbol visibility... yes (via -fvisibility=hidden) ============================================================================ == Final top-level OMPI configuration ============================================================================ *** Libevent 3rd party event handler checking for ANSI C header files... (cached) yes checking for fcntl.h... (cached) yes checking for stdarg.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for poll.h... (cached) yes checking signal.h usability... yes checking signal.h presence... yes checking for signal.h... yes checking for unistd.h... (cached) yes checking sys/epoll.h usability... yes checking sys/epoll.h presence... yes checking for sys/epoll.h... yes checking for sys/time.h... (cached) yes checking for sys/queue.h... (cached) yes checking sys/event.h usability... no checking sys/event.h presence... no checking for sys/event.h... no checking for sys/ioctl.h... (cached) yes checking sys/devpoll.h usability... no checking sys/devpoll.h presence... no checking for sys/devpoll.h... no checking for TAILQ_FOREACH in sys/queue.h... yes checking for timeradd in sys/time.h... yes checking whether time.h and sys/time.h may both be included... yes checking for gettimeofday... yes checking for vasprintf... (cached) yes checking for fcntl... yes checking for strtoll... yes checking for F_SETFD in fcntl.h... yes checking for select... yes checking for poll... yes checking for epoll_ctl... yes checking for working epoll library interface... yes checking for port_create... no checking for pid_t... yes checking for size_t... yes *** Libtool configuration checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking the maximum length of command line arguments... 805306365 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert arm-unknown-linux-gnueabi file names to arm-unknown-linux-gnueabi format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabi file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking for dlfcn.h... (cached) yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... no checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate *** GNU libltdl setup checking location of libltdl... external copy (unspecified) checking ltdl.h usability... yes checking ltdl.h presence... yes checking for ltdl.h... yes looking for library without search path checking for lt_dlopen in -lltdl... yes checking for lt_dladvise_init... yes *** Compiler flags checking which of CFLAGS are ok for debugger modules... -DNDEBUG -fno-strict-aliasing -pthread checking for debugger extra CFLAGS... -g *** Wrapper compiler final setup checking for perl... /usr/bin/perl checking for OPAL CPPFLAGS... checking for OPAL CFLAGS... -pthread checking for OPAL CXXFLAGS... -pthread checking for OPAL LDFLAGS... -L/usr//lib checking for OPAL LIBS... -ldl -lhwloc checking for OPAL extra include dirs... openmpi checking for ORTE CPPFLAGS... checking for ORTE CXXFLAGS... -pthread checking for ORTE CFLAGS... -pthread checking for ORTE LDFLAGS... -L/usr//lib checking for ORTE LIBS... -ldl -lhwloc checking for ORTE extra include dirs... openmpi checking for OMPI CPPFLAGS... checking for OMPI CFLAGS... -pthread checking for OMPI CXXFLAGS... -pthread checking for OMPI FFLAGS... -pthread checking for OMPI FCFLAGS... -pthread checking for OMPI LDFLAGS... -L/usr//lib checking for OMPI LIBS... -ldl -lhwloc checking for OMPI extra include dirs... openmpi *** Final output configure: creating ./config.status config.status: creating ompi/include/ompi/version.h config.status: creating orte/include/orte/version.h config.status: creating opal/include/opal/version.h config.status: creating opal/mca/installdirs/config/install_dirs.h config.status: creating opal/mca/backtrace/Makefile config.status: creating opal/mca/backtrace/darwin/Makefile config.status: creating opal/mca/backtrace/execinfo/Makefile config.status: creating opal/mca/backtrace/none/Makefile config.status: creating opal/mca/backtrace/printstack/Makefile config.status: creating opal/mca/carto/Makefile config.status: creating opal/mca/carto/auto_detect/Makefile config.status: creating opal/mca/carto/file/Makefile config.status: creating opal/mca/crs/Makefile config.status: creating opal/mca/crs/blcr/Makefile config.status: creating opal/mca/crs/none/Makefile config.status: creating opal/mca/crs/self/Makefile config.status: creating opal/mca/hwloc/Makefile config.status: creating opal/mca/hwloc/external/Makefile config.status: creating opal/mca/hwloc/hwloc132/Makefile config.status: creating opal/mca/installdirs/Makefile config.status: creating opal/mca/installdirs/config/Makefile config.status: creating opal/mca/installdirs/env/Makefile config.status: creating opal/mca/installdirs/windows/Makefile config.status: creating opal/mca/maffinity/Makefile config.status: creating opal/mca/maffinity/first_use/Makefile config.status: creating opal/mca/maffinity/hwloc/Makefile config.status: creating opal/mca/memchecker/Makefile config.status: creating opal/mca/memchecker/valgrind/Makefile config.status: creating opal/mca/memcpy/Makefile config.status: creating opal/mca/memory/Makefile config.status: creating opal/mca/memory/linux/Makefile config.status: creating opal/mca/memory/malloc_solaris/Makefile config.status: creating opal/mca/paffinity/Makefile config.status: creating opal/mca/paffinity/hwloc/Makefile config.status: creating opal/mca/paffinity/test/Makefile config.status: creating opal/mca/pstat/Makefile config.status: creating opal/mca/pstat/darwin/Makefile config.status: creating opal/mca/pstat/linux/Makefile config.status: creating opal/mca/shmem/Makefile config.status: creating opal/mca/shmem/mmap/Makefile config.status: creating opal/mca/shmem/posix/Makefile config.status: creating opal/mca/shmem/sysv/Makefile config.status: creating opal/mca/shmem/windows/Makefile config.status: creating opal/mca/sysinfo/Makefile config.status: creating opal/mca/sysinfo/darwin/Makefile config.status: creating opal/mca/sysinfo/linux/Makefile config.status: creating opal/mca/sysinfo/solaris/Makefile config.status: creating opal/mca/timer/Makefile config.status: creating opal/mca/timer/aix/Makefile config.status: creating opal/mca/timer/altix/Makefile config.status: creating opal/mca/timer/catamount/Makefile config.status: creating opal/mca/timer/darwin/Makefile config.status: creating opal/mca/timer/linux/Makefile config.status: creating opal/mca/timer/solaris/Makefile config.status: creating opal/mca/timer/windows/Makefile config.status: creating orte/mca/errmgr/Makefile config.status: creating orte/mca/errmgr/default/Makefile config.status: creating orte/mca/ess/Makefile config.status: creating orte/mca/ess/alps/Makefile config.status: creating orte/mca/ess/cnos/Makefile config.status: creating orte/mca/ess/env/Makefile config.status: creating orte/mca/ess/hnp/Makefile config.status: creating orte/mca/ess/lsf/Makefile config.status: creating orte/mca/ess/pmi/Makefile config.status: creating orte/mca/ess/portals_utcp/Makefile config.status: creating orte/mca/ess/singleton/Makefile config.status: creating orte/mca/ess/slave/Makefile config.status: creating orte/mca/ess/slurm/Makefile config.status: creating orte/mca/ess/slurmd/Makefile config.status: creating orte/mca/ess/tm/Makefile config.status: creating orte/mca/ess/tool/Makefile config.status: creating orte/mca/filem/Makefile config.status: creating orte/mca/filem/rsh/Makefile config.status: creating orte/mca/grpcomm/Makefile config.status: creating orte/mca/grpcomm/bad/Makefile config.status: creating orte/mca/grpcomm/basic/Makefile config.status: creating orte/mca/grpcomm/cnos/Makefile config.status: creating orte/mca/grpcomm/hier/Makefile config.status: creating orte/mca/grpcomm/pmi/Makefile config.status: creating orte/mca/iof/Makefile config.status: creating orte/mca/iof/hnp/Makefile config.status: creating orte/mca/iof/orted/Makefile config.status: creating orte/mca/iof/tool/Makefile config.status: creating orte/mca/notifier/Makefile config.status: creating orte/mca/notifier/command/Makefile config.status: creating orte/mca/notifier/ftb/Makefile config.status: creating orte/mca/notifier/smtp/Makefile config.status: creating orte/mca/notifier/syslog/Makefile config.status: creating orte/mca/odls/Makefile config.status: creating orte/mca/odls/default/Makefile config.status: creating orte/mca/odls/process/Makefile config.status: creating orte/mca/oob/Makefile config.status: creating orte/mca/oob/tcp/Makefile config.status: creating orte/mca/plm/Makefile config.status: creating orte/mca/plm/alps/Makefile config.status: creating orte/mca/plm/ccp/Makefile config.status: creating orte/mca/plm/lsf/Makefile config.status: creating orte/mca/plm/process/Makefile config.status: creating orte/mca/plm/rsh/Makefile config.status: creating orte/mca/plm/slurm/Makefile config.status: creating orte/mca/plm/tm/Makefile config.status: creating orte/mca/ras/Makefile config.status: creating orte/mca/ras/alps/Makefile config.status: creating orte/mca/ras/ccp/Makefile config.status: creating orte/mca/ras/cm/Makefile config.status: creating orte/mca/ras/gridengine/Makefile config.status: creating orte/mca/ras/loadleveler/Makefile config.status: creating orte/mca/ras/lsf/Makefile config.status: creating orte/mca/ras/slurm/Makefile config.status: creating orte/mca/ras/tm/Makefile config.status: creating orte/mca/rmaps/Makefile config.status: creating orte/mca/rmaps/load_balance/Makefile config.status: creating orte/mca/rmaps/rank_file/Makefile config.status: creating orte/mca/rmaps/resilient/Makefile config.status: creating orte/mca/rmaps/round_robin/Makefile config.status: creating orte/mca/rmaps/seq/Makefile config.status: creating orte/mca/rmaps/topo/Makefile config.status: creating orte/mca/rml/Makefile config.status: creating orte/mca/rml/ftrm/Makefile config.status: creating orte/mca/rml/oob/Makefile config.status: creating orte/mca/routed/Makefile config.status: creating orte/mca/routed/binomial/Makefile config.status: creating orte/mca/routed/cm/Makefile config.status: creating orte/mca/routed/direct/Makefile config.status: creating orte/mca/routed/linear/Makefile config.status: creating orte/mca/routed/radix/Makefile config.status: creating orte/mca/routed/slave/Makefile config.status: creating orte/mca/snapc/Makefile config.status: creating orte/mca/snapc/full/Makefile config.status: creating ompi/mca/allocator/Makefile config.status: creating ompi/mca/allocator/basic/Makefile config.status: creating ompi/mca/allocator/bucket/Makefile config.status: creating ompi/mca/bml/Makefile config.status: creating ompi/mca/bml/r2/Makefile config.status: creating ompi/mca/btl/Makefile config.status: creating ompi/mca/btl/elan/Makefile config.status: creating ompi/mca/btl/mx/Makefile config.status: creating ompi/mca/btl/ofud/Makefile config.status: creating ompi/mca/btl/openib/Makefile config.status: creating ompi/mca/btl/portals/Makefile config.status: creating ompi/mca/btl/sctp/Makefile config.status: creating ompi/mca/btl/self/Makefile config.status: creating ompi/mca/btl/sm/Makefile config.status: creating ompi/mca/btl/tcp/Makefile config.status: creating ompi/mca/btl/udapl/Makefile config.status: creating ompi/mca/coll/Makefile config.status: creating ompi/mca/coll/basic/Makefile config.status: creating ompi/mca/coll/fca/Makefile config.status: creating ompi/mca/coll/hierarch/Makefile config.status: creating ompi/mca/coll/inter/Makefile config.status: creating ompi/mca/coll/self/Makefile config.status: creating ompi/mca/coll/sm/Makefile config.status: creating ompi/mca/coll/sync/Makefile config.status: creating ompi/mca/coll/tuned/Makefile config.status: creating ompi/mca/common/Makefile config.status: creating ompi/mca/common/mx/Makefile config.status: creating ompi/mca/common/portals/Makefile config.status: creating ompi/mca/common/sm/Makefile config.status: creating ompi/mca/crcp/Makefile config.status: creating ompi/mca/crcp/bkmrk/Makefile config.status: creating ompi/mca/dpm/Makefile config.status: creating ompi/mca/dpm/orte/Makefile config.status: creating ompi/mca/io/Makefile config.status: creating ompi/mca/io/romio/Makefile config.status: creating ompi/mca/mpool/Makefile config.status: creating ompi/mca/mpool/fake/Makefile config.status: creating ompi/mca/mpool/rdma/Makefile config.status: creating ompi/mca/mpool/sm/Makefile config.status: creating ompi/mca/mtl/Makefile config.status: creating ompi/mca/mtl/mx/Makefile config.status: creating ompi/mca/mtl/mxm/Makefile config.status: creating ompi/mca/mtl/portals/Makefile config.status: creating ompi/mca/mtl/psm/Makefile config.status: creating ompi/mca/op/Makefile config.status: creating ompi/mca/osc/Makefile config.status: creating ompi/mca/osc/pt2pt/Makefile config.status: creating ompi/mca/osc/rdma/Makefile config.status: creating ompi/mca/pml/Makefile config.status: creating ompi/mca/pml/bfo/Makefile config.status: creating ompi/mca/pml/cm/Makefile config.status: creating ompi/mca/pml/crcpw/Makefile config.status: creating ompi/mca/pml/csum/Makefile config.status: creating ompi/mca/pml/ob1/Makefile config.status: creating ompi/mca/pml/v/mca/vprotocol/Makefile config.status: creating ompi/mca/pml/v/mca/vprotocol/pessimist/Makefile config.status: creating ompi/mca/pml/v/Makefile config.status: creating ompi/mca/pubsub/Makefile config.status: creating ompi/mca/pubsub/orte/Makefile config.status: creating ompi/mca/pubsub/pmi/Makefile config.status: creating ompi/mca/rcache/Makefile config.status: creating ompi/mca/rcache/vma/Makefile config.status: creating ompi/mca/topo/Makefile config.status: creating ompi/mca/topo/unity/Makefile config.status: creating ompi/contrib/libompitrace/Makefile config.status: creating ompi/mpiext/Makefile config.status: creating ompi/mpiext/affinity/Makefile config.status: creating ompi/mpiext/example/Makefile config.status: creating Makefile config.status: creating config/Makefile config.status: creating contrib/Makefile config.status: creating test/Makefile config.status: creating test/event/Makefile config.status: creating test/asm/Makefile config.status: creating test/datatype/Makefile config.status: creating test/class/Makefile config.status: creating test/support/Makefile config.status: creating test/threads/Makefile config.status: creating test/util/Makefile config.status: creating opal/Makefile config.status: creating opal/etc/Makefile config.status: creating opal/include/Makefile config.status: creating opal/asm/Makefile config.status: creating opal/datatype/Makefile config.status: creating opal/event/Makefile config.status: creating opal/event/compat/Makefile config.status: creating opal/event/compat/sys/Makefile config.status: creating opal/util/Makefile config.status: creating opal/util/keyval/Makefile config.status: creating opal/mca/base/Makefile config.status: creating opal/tools/wrappers/Makefile config.status: creating opal/tools/wrappers/opalcc-wrapper-data.txt config.status: creating opal/tools/wrappers/opalc++-wrapper-data.txt config.status: creating opal/tools/wrappers/opal.pc config.status: creating opal/tools/opal-checkpoint/Makefile config.status: creating opal/tools/opal-restart/Makefile config.status: creating orte/Makefile config.status: creating orte/include/Makefile config.status: creating orte/etc/Makefile config.status: creating orte/tools/orted/Makefile config.status: creating orte/tools/orterun/Makefile config.status: creating orte/tools/wrappers/Makefile config.status: creating orte/tools/wrappers/ortecc-wrapper-data.txt config.status: creating orte/tools/wrappers/ortec++-wrapper-data.txt config.status: creating orte/tools/wrappers/orte.pc config.status: creating orte/tools/orte-checkpoint/Makefile config.status: creating orte/tools/orte-iof/Makefile config.status: creating orte/tools/orte-restart/Makefile config.status: creating orte/tools/orte-ps/Makefile config.status: creating orte/tools/orte-clean/Makefile config.status: creating orte/tools/orte-top/Makefile config.status: creating orte/tools/orte-bootproxy/Makefile config.status: creating ompi/Makefile config.status: creating ompi/etc/Makefile config.status: creating ompi/include/Makefile config.status: creating ompi/include/mpif.h config.status: creating ompi/include/mpif-config.h config.status: creating ompi/datatype/Makefile config.status: creating ompi/debuggers/Makefile config.status: creating ompi/mpi/c/Makefile config.status: creating ompi/mpi/c/profile/Makefile config.status: creating ompi/mpi/cxx/Makefile config.status: creating ompi/mpi/f77/Makefile config.status: creating ompi/mpi/f77/profile/Makefile config.status: creating ompi/mpi/f90/Makefile config.status: creating ompi/mpi/f90/fortran_kinds.sh config.status: creating ompi/mpi/f90/fortran_sizes.h config.status: creating ompi/mpi/f90/scripts/Makefile config.status: creating ompi/tools/ompi_info/Makefile config.status: creating ompi/tools/wrappers/Makefile config.status: creating ompi/tools/wrappers/mpicc-wrapper-data.txt config.status: creating ompi/tools/wrappers/mpic++-wrapper-data.txt config.status: creating ompi/tools/wrappers/mpif77-wrapper-data.txt config.status: creating ompi/tools/wrappers/mpif90-wrapper-data.txt config.status: creating ompi/tools/wrappers/ompi.pc config.status: creating ompi/tools/wrappers/ompi-c.pc config.status: creating ompi/tools/wrappers/ompi-cxx.pc config.status: creating ompi/tools/wrappers/ompi-f77.pc config.status: creating ompi/tools/wrappers/ompi-f90.pc config.status: creating ompi/tools/ortetools/Makefile config.status: creating ompi/tools/ompi-server/Makefile config.status: creating ompi/tools/ompi-probe/Makefile config.status: creating ompi/tools/ompi-profiler/Makefile config.status: creating opal/include/opal_config.h config.status: creating orte/include/orte_config.h config.status: creating ompi/include/ompi_config.h config.status: creating ompi/include/mpi.h config.status: creating ompi/include/mpi_portable_platform.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory `/build/buildd/openmpi1.6-1.6.1' dh_auto_build -a -O--parallel make[1]: Entering directory `/build/buildd/openmpi1.6-1.6.1' Making all in config make[2]: Entering directory `/build/buildd/openmpi1.6-1.6.1/config' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/build/buildd/openmpi1.6-1.6.1/config' Making all in contrib make[2]: Entering directory `/build/buildd/openmpi1.6-1.6.1/contrib' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/build/buildd/openmpi1.6-1.6.1/contrib' Making all in opal make[2]: Entering directory `/build/buildd/openmpi1.6-1.6.1/opal' Making all in include make[3]: Entering directory `/build/buildd/openmpi1.6-1.6.1/opal/include' (CDPATH="${ZSH_VERSION+.}:" && cd ../.. && /bin/bash /build/buildd/openmpi1.6-1.6.1/config/missing --run autoheader) rm -f stamp-h1 touch opal_config.h.in cd ../.. && /bin/bash ./config.status opal/include/opal_config.h config.status: creating opal/include/opal_config.h config.status: opal/include/opal_config.h is unchanged make all-am make[4]: Entering directory `/build/buildd/openmpi1.6-1.6.1/opal/include' make[4]: Leaving directory `/build/buildd/openmpi1.6-1.6.1/opal/include' make[3]: Leaving directory `/build/buildd/openmpi1.6-1.6.1/opal/include' Making all in asm make[3]: Entering directory `/build/buildd/openmpi1.6-1.6.1/opal/asm' rm -f atomic-asm.S CC asm.lo ln -s "../../opal/asm/generated/atomic-local.s" atomic-asm.S CPPAS atomic-asm.lo atomic-asm.S: Assembler messages: atomic-asm.S:7: Error: selected processor does not support ARM mode `dmb' atomic-asm.S:15: Error: selected processor does not support ARM mode `dmb' atomic-asm.S:23: Error: selected processor does not support ARM mode `dmb' atomic-asm.S:32: Error: selected processor does not support ARM mode `ldrex r3,[r0]' atomic-asm.S:35: Error: selected processor does not support ARM mode `strex r12,r2,[r0]' atomic-asm.S:49: Error: selected processor does not support ARM mode `ldrex r3,[r0]' atomic-asm.S:52: Error: selected processor does not support ARM mode `strex r12,r2,[r0]' atomic-asm.S:55: Error: selected processor does not support ARM mode `dmb' atomic-asm.S:67: Error: selected processor does not support ARM mode `ldrex r3,[r0]' atomic-asm.S:70: Error: selected processor does not support ARM mode `dmb' atomic-asm.S:71: Error: selected processor does not support ARM mode `strex r12,r2,[r0]' atomic-asm.S:86: Error: selected processor does not support ARM mode `ldrex r2,[r0]' atomic-asm.S:88: Error: selected processor does not support ARM mode `strex r3,r2,[r0]' atomic-asm.S:100: Error: selected processor does not support ARM mode `ldrex r2,[r0]' atomic-asm.S:102: Error: selected processor does not support ARM mode `strex r3,r2,[r0]' make[3]: *** [atomic-asm.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory `/build/buildd/openmpi1.6-1.6.1/opal/asm' make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory `/build/buildd/openmpi1.6-1.6.1/opal' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/build/buildd/openmpi1.6-1.6.1' dh_auto_build: make -j2 returned exit code 2 make: *** [build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 ****************************************************************************** Build finished at 20120914-1136 FAILED [dpkg-buildpackage died] ****************************************************************************** Finished at 20120914-1136 Build needed 00:16:23, 127128k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '43894079033f0064ff0628de4b57f9bb9357af62'] Scanning for processes to kill in build /home/buildd/build-43894079033f0064ff0628de4b57f9bb9357af62/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '43894079033f0064ff0628de4b57f9bb9357af62'] Unmounting chroot for build 43894079033f0064ff0628de4b57f9bb9357af62... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '43894079033f0064ff0628de4b57f9bb9357af62'] Removing build 43894079033f0064ff0628de4b57f9bb9357af62