pairtools 1.0.2-2 source package in Ubuntu
Changelog
pairtools (1.0.2-2) unstable; urgency=medium * Team Upload. * Add B+R on "python3-pairtools (<< 1.0.2)" (Closes: #1027701) * B-D on python3-exceptiongroup at least temporarily to fix FTBFS -- Nilesh Patra <email address hidden> Tue, 03 Jan 2023 00:30:28 +0530
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| pairtools_1.0.2-2.dsc | 1.7 KiB | 9cb020634b36335d74a100d5c4c0d00bbb853c729aab6431698237a43ae78a88 |
| pairtools_1.0.2.orig.tar.gz | 919.5 KiB | b0224263370d2c2847f383afcc7e2745715d51a2d444b3b7232da089bbd7ace1 |
| pairtools_1.0.2-2.debian.tar.xz | 6.8 KiB | a61d9d86510b4d212ec4783dd59f13363ad045f1d1c932ac33fb0bb1f8405bdc |
Available diffs
- diff from 0.3.0-3.2build2 (in Ubuntu) to 1.0.2-2 (613.0 KiB)
- diff from 1.0.2-1 to 1.0.2-2 (692 bytes)
No changes file available.
Binary packages built by this source
- python3-pairtools: Framework to process sequencing data from a Hi-C experiment
Simple and fast command-line framework to process sequencing data from a Hi-C
experiment.
.
Process pair-end sequence alignments and perform the following operations:
.
- Detect ligation junctions (a.k.a. Hi-C pairs) in aligned paired-end
sequences of Hi-C DNA molecules
- Sort .pairs files for downstream analyses
- Detect, tag and remove PCR/optical duplicates
- Generate extensive statistics of Hi-C datasets
- Select Hi-C pairs given flexibly defined criteria
- Restore .sam alignments from Hi-C pairs
- python3-pairtools-dbgsym: debug symbols for python3-pairtools
- python3-pairtools-examples: Process sequencing data from a Hi-C experiment (examples)
Simple and fast command-line framework to process sequencing data from a Hi-C
experiment.
.
Process pair-end sequence alignments and perform the following operations:
.
- Detect ligation junctions (a.k.a. Hi-C pairs) in aligned paired-end
sequences of Hi-C DNA molecules
- Sort .pairs files for downstream analyses
- Detect, tag and remove PCR/optical duplicates
- Generate extensive statistics of Hi-C datasets
- Select Hi-C pairs given flexibly defined criteria
- Restore .sam alignments from Hi-C pairs
.
This package contains some examples
