phast 1.6+dfsg-3 source package in Ubuntu
Changelog
phast (1.6+dfsg-3) unstable; urgency=medium * Port to pcre2 Closes: #1000000, #1000163 -- Andreas Tille <email address hidden> Fri, 19 Nov 2021 13:17:54 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Mantic | release | universe | misc | |
Lunar | release | universe | misc | |
Jammy | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
phast_1.6+dfsg-3.dsc | 2.0 KiB | d961d6761663e45c8481fc8112b60d00218c03a93ca96d7746135b90140f8490 |
phast_1.6+dfsg.orig.tar.xz | 1.7 MiB | 7deae15e8bd8ce8e11b251b42795e0595dd86271360b08d15e6ba107ae66863f |
phast_1.6+dfsg-3.debian.tar.xz | 56.3 KiB | 95f5073ace91794c2f9bffcc725a73c4e1c7f8d754080ae5df622192c378b8b6 |
Available diffs
- diff from 1.6+dfsg-1 to 1.6+dfsg-3 (5.8 KiB)
- diff from 1.6+dfsg-2 to 1.6+dfsg-3 (5.2 KiB)
No changes file available.
Binary packages built by this source
- phast: phylogenetic analysis with space/time models
PHAST is a software package for comparative and evolutionary genomics.
It consists of about half a dozen major programs, plus more than a dozen
utilities for manipulating sequence alignments, phylogenetic trees, and
genomic annotations. For the most part, PHAST focuses on two kinds of
applications: the identification of novel functional elements, including
protein-coding exons and evolutionarily conserved sequences; and
statistical phylogenetic modeling, including estimation of model
parameters, detection of signatures of selection, and reconstruction of
ancestral sequences.
.
PHAST does not support phylogeny reconstruction or sequence alignment,
and it is designed for use with DNA sequences only (see Comparison).
- phast-dbgsym: debug symbols for phast