pirs 2.0.2+dfsg-9 source package in Ubuntu
Changelog
pirs (2.0.2+dfsg-9) unstable; urgency=medium
* Standards-Version: 4.5.1 (routine-update)
* debhelper-compat 13 (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
Repository-Browse.
* Replace use of deprecated $ADTTMP with $AUTOPKGTEST_TMP.
-- Andreas Tille <email address hidden> Sat, 05 Dec 2020 12:01:22 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| pirs_2.0.2+dfsg-9.dsc | 2.1 KiB | ee78f8d478fdb26fc791e924515a7159d0aef230986e297d2c6054d8ea785e50 |
| pirs_2.0.2+dfsg.orig.tar.xz | 5.7 MiB | ef7ed1400dafd06f29a699023f0ecdcd52e0073254c87646c4ecea803e4b1d93 |
| pirs_2.0.2+dfsg-9.debian.tar.xz | 6.9 KiB | b7a6f1464a84e3c8c96b9d85fbafce015cd328cf089a5dde90c4e8f86f04cf27 |
Available diffs
No changes file available.
Binary packages built by this source
- pirs: Profile based Illumina pair-end Reads Simulator
The program pIRS can be used for simulating Illumina PE reads, with a
series of characters generated by Illumina sequencing platform, such as
insert size distribution, sequencing error(substitution, insertion,
deletion), quality score and GC content-coverage bias.
.
The insert size follows a normal distribution, so users should set the
mean value and standard deviation. Usually the standard deviation is set
as 1/20 of the mean value. The normal distribution by Box-Muller method
is simulated.
.
The program simulates sequencing error, quality score and GC content-
coverage bias according to the empirical distribution profile. Some
default profiles counted from lots of real sequencing data are provided.
.
To simulate reads from diploid genome, users should simulate the diploid
genome sequence firstly by setting the ratio of heterozygosis SNP,
heterozygosis InDel and structure variation.
- pirs-dbgsym: No summary available for pirs-dbgsym in ubuntu impish.
No description available for pirs-dbgsym in ubuntu impish.
- pirs-examples: No summary available for pirs-examples in ubuntu impish.
No description available for pirs-examples in ubuntu impish.
- pirs-profiles: No summary available for pirs-profiles in ubuntu hirsute.
No description available for pirs-profiles in ubuntu hirsute.
