RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux templar 3.8.0-2-mustang #12-Ubuntu SMP Thu Jan 9 09:48:54 UTC 2014 aarch64 Buildd toolchain package versions: launchpad-buildd_126 python-lpbuildd_126 dpkg-dev_1.17.5ubuntu5.3. Syncing the system clock with the buildd NTP service... 21 Feb 21:51:31 ntpdate[5856]: adjust time server 10.211.37.1 offset -0.009870 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-7001183', '/home/buildd/filecache-default/9981dd928c61f5f15a51d1c46051dba50da89193'] Unpacking chroot for build PACKAGEBUILD-7001183 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-7001183'] Mounting chroot for build PACKAGEBUILD-7001183 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-7001183', 'deb http://ftpmaster.internal/ubuntu utopic main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu utopic-security main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu utopic-updates main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu utopic-backports main restricted universe multiverse'] Overriding sources.list in build-PACKAGEBUILD-7001183 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-7001183', 'arm64'] Updating debian chroot for build PACKAGEBUILD-7001183 Ign http://ftpmaster.internal utopic InRelease Ign http://ftpmaster.internal utopic-security InRelease Ign http://ftpmaster.internal utopic-updates InRelease Ign http://ftpmaster.internal utopic-backports InRelease Get:1 http://ftpmaster.internal utopic Release.gpg [933 B] Get:2 http://ftpmaster.internal utopic-security Release.gpg [933 B] Get:3 http://ftpmaster.internal utopic-updates Release.gpg [933 B] Get:4 http://ftpmaster.internal utopic-backports Release.gpg [933 B] Get:5 http://ftpmaster.internal utopic Release [215 kB] Get:6 http://ftpmaster.internal utopic-security Release [62.0 kB] Get:7 http://ftpmaster.internal utopic-updates Release [62.0 kB] Get:8 http://ftpmaster.internal utopic-backports Release [62.0 kB] Get:9 http://ftpmaster.internal utopic/main arm64 Packages [1277 kB] Get:10 http://ftpmaster.internal utopic/restricted arm64 Packages [14 B] Get:11 http://ftpmaster.internal utopic/universe arm64 Packages [5865 kB] Get:12 http://ftpmaster.internal utopic/multiverse arm64 Packages [108 kB] Get:13 http://ftpmaster.internal utopic/main Translation-en [769 kB] Get:14 http://ftpmaster.internal utopic/multiverse Translation-en [101 kB] Get:15 http://ftpmaster.internal utopic/restricted Translation-en [3315 B] Get:16 http://ftpmaster.internal utopic/universe Translation-en [4264 kB] Get:17 http://ftpmaster.internal utopic-security/main arm64 Packages [102 kB] Get:18 http://ftpmaster.internal utopic-security/restricted arm64 Packages [28 B] Get:19 http://ftpmaster.internal utopic-security/universe arm64 Packages [47.0 kB] Get:20 http://ftpmaster.internal utopic-security/multiverse arm64 Packages [1319 B] Get:21 http://ftpmaster.internal utopic-security/main Translation-en [57.3 kB] Get:22 http://ftpmaster.internal utopic-security/multiverse Translation-en [1943 B] Get:23 http://ftpmaster.internal utopic-security/restricted Translation-en [2268 B] Get:24 http://ftpmaster.internal utopic-security/universe Translation-en [28.4 kB] Get:25 http://ftpmaster.internal utopic-updates/main arm64 Packages [167 kB] Get:26 http://ftpmaster.internal utopic-updates/restricted arm64 Packages [28 B] Get:27 http://ftpmaster.internal utopic-updates/universe arm64 Packages [70.3 kB] Get:28 http://ftpmaster.internal utopic-updates/multiverse arm64 Packages [1319 B] Get:29 http://ftpmaster.internal utopic-updates/main Translation-en [85.0 kB] Get:30 http://ftpmaster.internal utopic-updates/multiverse Translation-en [1943 B] Get:31 http://ftpmaster.internal utopic-updates/restricted Translation-en [2268 B] Get:32 http://ftpmaster.internal utopic-updates/universe Translation-en [41.6 kB] Get:33 http://ftpmaster.internal utopic-backports/main arm64 Packages [567 B] Get:34 http://ftpmaster.internal utopic-backports/restricted arm64 Packages [28 B] Get:35 http://ftpmaster.internal utopic-backports/universe arm64 Packages [9522 B] Get:36 http://ftpmaster.internal utopic-backports/multiverse arm64 Packages [28 B] Get:37 http://ftpmaster.internal utopic-backports/main Translation-en [290 B] Get:38 http://ftpmaster.internal utopic-backports/multiverse Translation-en [14 B] Get:39 http://ftpmaster.internal utopic-backports/restricted Translation-en [14 B] Get:40 http://ftpmaster.internal utopic-backports/universe Translation-en [11.5 kB] Fetched 13.4 MB in 11s (1215 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: binutils cpio libc-bin libc-dev-bin libc6 libc6-dev libcgmanager0 libcurl3-gnutls libdbus-1-3 libgnutls-deb0-28 libgssapi-krb5-2 libk5crypto3 libkrb5-3 libkrb5support0 libprocps3 libssl1.0.0 libsystemd-journal0 libudev1 linux-libc-dev mountall multiarch-support openssl procps tzdata udev 25 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 13.6 MB of archives. After this operation, 48.1 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ utopic-updates/main libc6-dev arm64 2.19-10ubuntu2.2 [1677 kB] Get:2 http://ftpmaster.internal/ubuntu/ utopic-updates/main libc-dev-bin arm64 2.19-10ubuntu2.2 [61.8 kB] Get:3 http://ftpmaster.internal/ubuntu/ utopic-updates/main linux-libc-dev arm64 3.16.0-30.40 [761 kB] Get:4 http://ftpmaster.internal/ubuntu/ utopic-updates/main libc-bin arm64 2.19-10ubuntu2.2 [1045 kB] Get:5 http://ftpmaster.internal/ubuntu/ utopic-updates/main libc6 arm64 2.19-10ubuntu2.2 [4084 kB] Get:6 http://ftpmaster.internal/ubuntu/ utopic-updates/main libsystemd-journal0 arm64 208-8ubuntu8.2 [45.5 kB] Get:7 http://ftpmaster.internal/ubuntu/ utopic-security/main libgnutls-deb0-28 arm64 3.2.16-1ubuntu2.1 [381 kB] Get:8 http://ftpmaster.internal/ubuntu/ utopic-security/main libssl1.0.0 arm64 1.0.1f-1ubuntu9.1 [675 kB] Get:9 http://ftpmaster.internal/ubuntu/ utopic-security/main libdbus-1-3 arm64 1.8.8-1ubuntu2.1 [123 kB] Get:10 http://ftpmaster.internal/ubuntu/ utopic-updates/main libprocps3 arm64 1:3.3.9-1ubuntu5.2 [27.9 kB] Get:11 http://ftpmaster.internal/ubuntu/ utopic-updates/main procps arm64 1:3.3.9-1ubuntu5.2 [200 kB] Get:12 http://ftpmaster.internal/ubuntu/ utopic-updates/main udev arm64 208-8ubuntu8.2 [783 kB] Get:13 http://ftpmaster.internal/ubuntu/ utopic-updates/main libudev1 arm64 208-8ubuntu8.2 [30.1 kB] Get:14 http://ftpmaster.internal/ubuntu/ utopic-security/main mountall arm64 2.54ubuntu0.14.10.1 [50.9 kB] Get:15 http://ftpmaster.internal/ubuntu/ utopic-security/main libgssapi-krb5-2 arm64 1.12.1+dfsg-10ubuntu0.1 [97.9 kB] Get:16 http://ftpmaster.internal/ubuntu/ utopic-security/main libkrb5-3 arm64 1.12.1+dfsg-10ubuntu0.1 [225 kB] Get:17 http://ftpmaster.internal/ubuntu/ utopic-security/main libkrb5support0 arm64 1.12.1+dfsg-10ubuntu0.1 [28.2 kB] Get:18 http://ftpmaster.internal/ubuntu/ utopic-security/main libk5crypto3 arm64 1.12.1+dfsg-10ubuntu0.1 [78.3 kB] Get:19 http://ftpmaster.internal/ubuntu/ utopic-security/main libcurl3-gnutls arm64 7.37.1-1ubuntu3.2 [141 kB] Get:20 http://ftpmaster.internal/ubuntu/ utopic-updates/main multiarch-support arm64 2.19-10ubuntu2.2 [7286 B] Get:21 http://ftpmaster.internal/ubuntu/ utopic-security/main tzdata all 2015a-0ubuntu0.14.10 [181 kB] Get:22 http://ftpmaster.internal/ubuntu/ utopic-security/main cpio arm64 2.11+dfsg-2ubuntu1.1 [63.8 kB] Get:23 http://ftpmaster.internal/ubuntu/ utopic-updates/main libcgmanager0 arm64 0.32-4ubuntu1.3 [26.5 kB] Get:24 http://ftpmaster.internal/ubuntu/ utopic-security/main openssl arm64 1.0.1f-1ubuntu9.1 [474 kB] Get:25 http://ftpmaster.internal/ubuntu/ utopic-security/main binutils arm64 2.24.90.20141014-0ubuntu3.1 [2369 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.6 MB in 21s (646 kB/s) (Reading database ... 11387 files and directories currently installed.) Preparing to unpack .../libc6-dev_2.19-10ubuntu2.2_arm64.deb ... Unpacking libc6-dev:arm64 (2.19-10ubuntu2.2) over (2.19-10ubuntu2) ... Preparing to unpack .../libc-dev-bin_2.19-10ubuntu2.2_arm64.deb ... Unpacking libc-dev-bin (2.19-10ubuntu2.2) over (2.19-10ubuntu2) ... Preparing to unpack .../linux-libc-dev_3.16.0-30.40_arm64.deb ... Unpacking linux-libc-dev:arm64 (3.16.0-30.40) over (3.16.0-23.31) ... Preparing to unpack .../libc-bin_2.19-10ubuntu2.2_arm64.deb ... Unpacking libc-bin (2.19-10ubuntu2.2) over (2.19-10ubuntu2) ... Setting up libc-bin (2.19-10ubuntu2.2) ... (Reading database ... 11387 files and directories currently installed.) Preparing to unpack .../libc6_2.19-10ubuntu2.2_arm64.deb ... Unpacking libc6:arm64 (2.19-10ubuntu2.2) over (2.19-10ubuntu2) ... Setting up libc6:arm64 (2.19-10ubuntu2.2) ... Processing triggers for libc-bin (2.19-10ubuntu2.2) ... (Reading database ... 11387 files and directories currently installed.) Preparing to unpack .../libsystemd-journal0_208-8ubuntu8.2_arm64.deb ... Unpacking libsystemd-journal0:arm64 (208-8ubuntu8.2) over (208-8ubuntu8) ... Setting up libsystemd-journal0:arm64 (208-8ubuntu8.2) ... Processing triggers for libc-bin (2.19-10ubuntu2.2) ... (Reading database ... 11387 files and directories currently installed.) Preparing to unpack .../libgnutls-deb0-28_3.2.16-1ubuntu2.1_arm64.deb ... Unpacking libgnutls-deb0-28:arm64 (3.2.16-1ubuntu2.1) over (3.2.16-1ubuntu2) ... Preparing to unpack .../libssl1.0.0_1.0.1f-1ubuntu9.1_arm64.deb ... Unpacking libssl1.0.0:arm64 (1.0.1f-1ubuntu9.1) over (1.0.1f-1ubuntu9) ... Preparing to unpack .../libdbus-1-3_1.8.8-1ubuntu2.1_arm64.deb ... Unpacking libdbus-1-3:arm64 (1.8.8-1ubuntu2.1) over (1.8.8-1ubuntu2) ... Preparing to unpack .../libprocps3_1%3a3.3.9-1ubuntu5.2_arm64.deb ... Unpacking libprocps3:arm64 (1:3.3.9-1ubuntu5.2) over (1:3.3.9-1ubuntu5) ... Preparing to unpack .../procps_1%3a3.3.9-1ubuntu5.2_arm64.deb ... invoke-rc.d: policy-rc.d denied execution of stop. Unpacking procps (1:3.3.9-1ubuntu5.2) over (1:3.3.9-1ubuntu5) ... Preparing to unpack .../udev_208-8ubuntu8.2_arm64.deb ... Unpacking udev (208-8ubuntu8.2) over (208-8ubuntu8) ... Preparing to unpack .../libudev1_208-8ubuntu8.2_arm64.deb ... Unpacking libudev1:arm64 (208-8ubuntu8.2) over (208-8ubuntu8) ... Preparing to unpack .../mountall_2.54ubuntu0.14.10.1_arm64.deb ... Unpacking mountall (2.54ubuntu0.14.10.1) over (2.54build1) ... Preparing to unpack .../libgssapi-krb5-2_1.12.1+dfsg-10ubuntu0.1_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.12.1+dfsg-10ubuntu0.1) over (1.12.1+dfsg-10) ... Preparing to unpack .../libkrb5-3_1.12.1+dfsg-10ubuntu0.1_arm64.deb ... Unpacking libkrb5-3:arm64 (1.12.1+dfsg-10ubuntu0.1) over (1.12.1+dfsg-10) ... Preparing to unpack .../libkrb5support0_1.12.1+dfsg-10ubuntu0.1_arm64.deb ... Unpacking libkrb5support0:arm64 (1.12.1+dfsg-10ubuntu0.1) over (1.12.1+dfsg-10) ... Preparing to unpack .../libk5crypto3_1.12.1+dfsg-10ubuntu0.1_arm64.deb ... Unpacking libk5crypto3:arm64 (1.12.1+dfsg-10ubuntu0.1) over (1.12.1+dfsg-10) ... Preparing to unpack .../libcurl3-gnutls_7.37.1-1ubuntu3.2_arm64.deb ... Unpacking libcurl3-gnutls:arm64 (7.37.1-1ubuntu3.2) over (7.37.1-1ubuntu3) ... Preparing to unpack .../multiarch-support_2.19-10ubuntu2.2_arm64.deb ... Unpacking multiarch-support (2.19-10ubuntu2.2) over (2.19-10ubuntu2) ... Setting up multiarch-support (2.19-10ubuntu2.2) ... (Reading database ... 11387 files and directories currently installed.) Preparing to unpack .../tzdata_2015a-0ubuntu0.14.10_all.deb ... Unpacking tzdata (2015a-0ubuntu0.14.10) over (2014h-2) ... Setting up tzdata (2015a-0ubuntu0.14.10) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Feb 21 21:52:35 UTC 2015. Universal Time is now: Sat Feb 21 21:52:35 UTC 2015. Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 11390 files and directories currently installed.) Preparing to unpack .../cpio_2.11+dfsg-2ubuntu1.1_arm64.deb ... Unpacking cpio (2.11+dfsg-2ubuntu1.1) over (2.11+dfsg-2ubuntu1) ... Preparing to unpack .../libcgmanager0_0.32-4ubuntu1.3_arm64.deb ... Unpacking libcgmanager0:arm64 (0.32-4ubuntu1.3) over (0.32-4ubuntu1) ... Preparing to unpack .../openssl_1.0.1f-1ubuntu9.1_arm64.deb ... Unpacking openssl (1.0.1f-1ubuntu9.1) over (1.0.1f-1ubuntu9) ... Preparing to unpack .../binutils_2.24.90.20141014-0ubuntu3.1_arm64.deb ... Unpacking binutils (2.24.90.20141014-0ubuntu3.1) over (2.24.90.20141014-0ubuntu3) ... Setting up libc-dev-bin (2.19-10ubuntu2.2) ... Setting up linux-libc-dev:arm64 (3.16.0-30.40) ... Setting up libc6-dev:arm64 (2.19-10ubuntu2.2) ... Setting up libgnutls-deb0-28:arm64 (3.2.16-1ubuntu2.1) ... Setting up libssl1.0.0:arm64 (1.0.1f-1ubuntu9.1) ... Setting up libdbus-1-3:arm64 (1.8.8-1ubuntu2.1) ... Setting up libprocps3:arm64 (1:3.3.9-1ubuntu5.2) ... Setting up procps (1:3.3.9-1ubuntu5.2) ... Installing new version of config file /etc/sysctl.d/10-zeropage.conf ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: policy-rc.d denied execution of start. Setting up libudev1:arm64 (208-8ubuntu8.2) ... Setting up udev (208-8ubuntu8.2) ... A chroot environment has been detected, udev not started. update-initramfs: deferring update (trigger activated) Setting up mountall (2.54ubuntu0.14.10.1) ... Setting up libkrb5support0:arm64 (1.12.1+dfsg-10ubuntu0.1) ... Setting up libk5crypto3:arm64 (1.12.1+dfsg-10ubuntu0.1) ... Setting up libkrb5-3:arm64 (1.12.1+dfsg-10ubuntu0.1) ... Setting up libgssapi-krb5-2:arm64 (1.12.1+dfsg-10ubuntu0.1) ... Setting up libcurl3-gnutls:arm64 (7.37.1-1ubuntu3.2) ... Setting up cpio (2.11+dfsg-2ubuntu1.1) ... Setting up libcgmanager0:arm64 (0.32-4ubuntu1.3) ... Setting up openssl (1.0.1f-1ubuntu9.1) ... Setting up binutils (2.24.90.20141014-0ubuntu3.1) ... Processing triggers for libc-bin (2.19-10ubuntu2.2) ... Processing triggers for initramfs-tools (0.103ubuntu8) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-7001183', 'arm64', 'utopic-backports', '--nolog', '--batch', '--archive=ubuntu', '--dist=utopic-backports', '--purpose=PRIMARY', '--architecture=arm64', '--comp=universe', 'prodigal_2.6.1-1~ubuntu14.10.1.dsc'] Initiating build PACKAGEBUILD-7001183 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 3.8.0-2-mustang #12-Ubuntu SMP Thu Jan 9 09:48:54 UTC 2014 aarch64 Automatic build of prodigal_2.6.1-1~ubuntu14.10.1 on templar by sbuild/arm64 1.170.5 Build started at 20150221-2152 ****************************************************************************** prodigal_2.6.1-1~ubuntu14.10.1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 9) Checking for already installed source dependencies... debhelper: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils dh-apparmor file gettext gettext-base groff-base intltool-debian libasprintf0c2 libcroco3 libglib2.0-0 libmagic1 libpipeline1 libunistring0 libxml2 man-db po-debconf Suggested packages: wamerican wordlist whois vacation dh-make apparmor-easyprof gettext-doc groff less www-browser libmail-box-perl Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info xdg-user-dirs xml-core libmail-sendmail-perl The following NEW packages will be installed: bsdmainutils debhelper dh-apparmor file gettext gettext-base groff-base intltool-debian libasprintf0c2 libcroco3 libglib2.0-0 libmagic1 libpipeline1 libunistring0 libxml2 man-db po-debconf 0 upgraded, 17 newly installed, 0 to remove and 0 not upgraded. Need to get 5805 kB of archives. After this operation, 22.3 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ utopic-security/main libmagic1 arm64 1:5.19-1ubuntu1.2 [195 kB] Get:2 http://ftpmaster.internal/ubuntu/ utopic/main libasprintf0c2 arm64 0.19.2-2ubuntu1 [6314 B] Get:3 http://ftpmaster.internal/ubuntu/ utopic-updates/main libglib2.0-0 arm64 2.42.1-1~ubuntu1 [899 kB] Get:4 http://ftpmaster.internal/ubuntu/ utopic/main libpipeline1 arm64 1.3.1-1 [21.4 kB] Get:5 http://ftpmaster.internal/ubuntu/ utopic/main libxml2 arm64 2.9.1+dfsg1-4ubuntu1 [473 kB] Get:6 http://ftpmaster.internal/ubuntu/ utopic/main groff-base arm64 1.22.2-8 [1139 kB] Get:7 http://ftpmaster.internal/ubuntu/ utopic/main bsdmainutils arm64 9.0.5ubuntu1 [199 kB] Get:8 http://ftpmaster.internal/ubuntu/ utopic/main man-db arm64 2.7.0.2-2 [836 kB] Get:9 http://ftpmaster.internal/ubuntu/ utopic/main libcroco3 arm64 0.6.8-3 [67.5 kB] Get:10 http://ftpmaster.internal/ubuntu/ utopic/main libunistring0 arm64 0.9.3-5ubuntu3 [255 kB] Get:11 http://ftpmaster.internal/ubuntu/ utopic-security/main file arm64 1:5.19-1ubuntu1.2 [20.3 kB] Get:12 http://ftpmaster.internal/ubuntu/ utopic/main gettext-base arm64 0.19.2-2ubuntu1 [45.8 kB] Get:13 http://ftpmaster.internal/ubuntu/ utopic/main gettext arm64 0.19.2-2ubuntu1 [792 kB] Get:14 http://ftpmaster.internal/ubuntu/ utopic/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:15 http://ftpmaster.internal/ubuntu/ utopic/main po-debconf all 1.0.16+nmu3 [207 kB] Get:16 http://ftpmaster.internal/ubuntu/ utopic/main dh-apparmor all 2.8.98-0ubuntu2 [11.0 kB] Get:17 http://ftpmaster.internal/ubuntu/ utopic/main debhelper all 9.20140613ubuntu2 [607 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5805 kB in 4s (1448 kB/s) Selecting previously unselected package libmagic1:arm64. (Reading database ... 11390 files and directories currently installed.) Preparing to unpack .../libmagic1_1%3a5.19-1ubuntu1.2_arm64.deb ... Unpacking libmagic1:arm64 (1:5.19-1ubuntu1.2) ... Selecting previously unselected package libasprintf0c2:arm64. Preparing to unpack .../libasprintf0c2_0.19.2-2ubuntu1_arm64.deb ... Unpacking libasprintf0c2:arm64 (0.19.2-2ubuntu1) ... Selecting previously unselected package libglib2.0-0:arm64. Preparing to unpack .../libglib2.0-0_2.42.1-1~ubuntu1_arm64.deb ... Unpacking libglib2.0-0:arm64 (2.42.1-1~ubuntu1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../libpipeline1_1.3.1-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.3.1-1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../libxml2_2.9.1+dfsg1-4ubuntu1_arm64.deb ... Unpacking libxml2:arm64 (2.9.1+dfsg1-4ubuntu1) ... Selecting previously unselected package groff-base. Preparing to unpack .../groff-base_1.22.2-8_arm64.deb ... Unpacking groff-base (1.22.2-8) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../bsdmainutils_9.0.5ubuntu1_arm64.deb ... Unpacking bsdmainutils (9.0.5ubuntu1) ... Selecting previously unselected package man-db. Preparing to unpack .../man-db_2.7.0.2-2_arm64.deb ... Unpacking man-db (2.7.0.2-2) ... Selecting previously unselected package libcroco3:arm64. Preparing to unpack .../libcroco3_0.6.8-3_arm64.deb ... Unpacking libcroco3:arm64 (0.6.8-3) ... Selecting previously unselected package libunistring0:arm64. Preparing to unpack .../libunistring0_0.9.3-5ubuntu3_arm64.deb ... Unpacking libunistring0:arm64 (0.9.3-5ubuntu3) ... Selecting previously unselected package file. Preparing to unpack .../file_1%3a5.19-1ubuntu1.2_arm64.deb ... Unpacking file (1:5.19-1ubuntu1.2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../gettext-base_0.19.2-2ubuntu1_arm64.deb ... Unpacking gettext-base (0.19.2-2ubuntu1) ... Selecting previously unselected package gettext. Preparing to unpack .../gettext_0.19.2-2ubuntu1_arm64.deb ... Unpacking gettext (0.19.2-2ubuntu1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../intltool-debian_0.35.0+20060710.1_all.deb ... Unpacking intltool-debian (0.35.0+20060710.1) ... Selecting previously unselected package po-debconf. Preparing to unpack .../po-debconf_1.0.16+nmu3_all.deb ... Unpacking po-debconf (1.0.16+nmu3) ... Selecting previously unselected package dh-apparmor. Preparing to unpack .../dh-apparmor_2.8.98-0ubuntu2_all.deb ... Unpacking dh-apparmor (2.8.98-0ubuntu2) ... Selecting previously unselected package debhelper. Preparing to unpack .../debhelper_9.20140613ubuntu2_all.deb ... Unpacking debhelper (9.20140613ubuntu2) ... Setting up libmagic1:arm64 (1:5.19-1ubuntu1.2) ... Setting up libasprintf0c2:arm64 (0.19.2-2ubuntu1) ... Setting up libglib2.0-0:arm64 (2.42.1-1~ubuntu1) ... No schema files found: doing nothing. Setting up libpipeline1:arm64 (1.3.1-1) ... Setting up libxml2:arm64 (2.9.1+dfsg1-4ubuntu1) ... Setting up groff-base (1.22.2-8) ... Setting up bsdmainutils (9.0.5ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.7.0.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libcroco3:arm64 (0.6.8-3) ... Setting up libunistring0:arm64 (0.9.3-5ubuntu3) ... Setting up file (1:5.19-1ubuntu1.2) ... Setting up gettext-base (0.19.2-2ubuntu1) ... Setting up gettext (0.19.2-2ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu3) ... Setting up dh-apparmor (2.8.98-0ubuntu2) ... Setting up debhelper (9.20140613ubuntu2) ... Processing triggers for libc-bin (2.19-10ubuntu2.2) ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.19-10ubuntu2.2 make_4.0-8 dpkg-dev_1.17.13ubuntu1 gcc-4.9_4.9.1-16ubuntu6 g++-4.9_4.9.1-16ubuntu6 binutils_2.24.90.20141014-0ubuntu3.1 libstdc++-4.9-dev_4.9.1-16ubuntu6 libstdc++6_4.9.1-16ubuntu6 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::Quilt gpgv: Signature made Sat Feb 21 21:45:29 2015 UTC using RSA key ID 83135D45 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./prodigal_2.6.1-1~ubuntu14.10.1.dsc dpkg-source: info: extracting prodigal in prodigal-2.6.1 dpkg-source: info: unpacking prodigal_2.6.1.orig.tar.gz dpkg-source: info: unpacking prodigal_2.6.1-1~ubuntu14.10.1.debian.tar.xz dpkg-source: info: applying hardening.patch dpkg-buildpackage: source package prodigal dpkg-buildpackage: source version 1:2.6.1-1~ubuntu14.10.1 dpkg-buildpackage: source distribution utopic-backports dpkg-source --before-build prodigal-2.6.1 dpkg-buildpackage: host architecture arm64 /usr/bin/fakeroot debian/rules clean dh clean dh_testdir dh_auto_clean make[1]: Entering directory '/build/buildd/prodigal-2.6.1' rm -f bitmap.o dprog.o gene.o main.o metagenomic.o node.o sequence.o training.o rm -f prodigal make[1]: Leaving directory '/build/buildd/prodigal-2.6.1' debian/rules override_dh_clean make[1]: Entering directory '/build/buildd/prodigal-2.6.1' dh_clean rm -f prodigal.1 make[1]: Leaving directory '/build/buildd/prodigal-2.6.1' debian/rules build-arch dh build-arch dh_testdir -a dh_auto_configure -a dh_auto_build -a make[1]: Entering directory '/build/buildd/prodigal-2.6.1' gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -pedantic -Wall -O3 -c -o bitmap.o bitmap.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -pedantic -Wall -O3 -c -o dprog.o dprog.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -pedantic -Wall -O3 -c -o gene.o gene.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -pedantic -Wall -O3 -c -o main.o main.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -pedantic -Wall -O3 -c -o metagenomic.o metagenomic.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -pedantic -Wall -O3 -c -o node.o node.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -pedantic -Wall -O3 -c -o sequence.o sequence.c sequence.c: In function 'read_seq_training': sequence.c:61:9: warning: format '%d' expects argument of type 'int *', but argument 3 has type 'unsigned int *' [-Wformat=] sscanf(strstr(line, "gap")+4, "%d", &gapsize); ^ sequence.c: In function 'next_seq_multi': sequence.c:172:9: warning: format '%d' expects argument of type 'int *', but argument 3 has type 'unsigned int *' [-Wformat=] sscanf(strstr(line, "gap")+4, "%d", &gapsize); ^ gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -pedantic -Wall -O3 -c -o training.o training.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -pedantic -Wall -O3 -o prodigal bitmap.o dprog.o gene.o main.o metagenomic.o node.o sequence.o training.o -lm -Wl,-Bsymbolic-functions -Wl,-z,relro make[1]: Leaving directory '/build/buildd/prodigal-2.6.1' dh_auto_test -a /usr/bin/fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/build/buildd/prodigal-2.6.1' echo "Do not try to install to /usr/local" Do not try to install to /usr/local make[1]: Leaving directory '/build/buildd/prodigal-2.6.1' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_compress -a dh_fixperms -a dh_strip -a dh_strip debug symbol extraction: not enabling -a because /CurrentlyBuilding exists dh_strip debug symbol extraction: all non-arch-all packages for this build platform arm64: prodigal dh_strip debug symbol extraction: packages to act on: prodigal dh_strip debug symbol extraction: ignored packages: Using buildid for compat level >= 9 dpkg-gencontrol: warning: -is is deprecated; it is without effect dpkg-gencontrol: warning: -ip is deprecated; it is without effect dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe /usr/bin/pkg_create_dbgsym: building ddeb package dpkg-deb: building package `prodigal-dbgsym' in `../prodigal-dbgsym_2.6.1-1~ubuntu14.10.1_arm64.ddeb'. dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 121 pkgstriptranslations: building backport, doing nothing pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/prodigal/DEBIAN/control, package prodigal, directory debian/prodigal pkgstripfiles: PNG optimization for package prodigal took 0 s dpkg-deb: warning: 'debian/prodigal/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `prodigal' in `../prodigal_2.6.1-1~ubuntu14.10.1_arm64.deb'. dpkg-genchanges -B -mUbuntu Build Daemon >../prodigal_2.6.1-1~ubuntu14.10.1_arm64.changes dpkg-genchanges: warning: the current version (1:2.6.1-1~ubuntu14.10.1) is earlier than the previous one (1:2.6.1-1) dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build prodigal-2.6.1 dpkg-buildpackage: binary-only upload (no source included) ****************************************************************************** Build finished at 20150221-2220 Publishing debug debs. chroot-autobuild/build/buildd/prodigal_2.6.1-1~ubuntu14.10.1_arm64.deb: new debian package, version 2.0. size 889062 bytes: control archive=1454 bytes. 1908 bytes, 41 lines control 329 bytes, 5 lines md5sums Package: prodigal Version: 1:2.6.1-1~ubuntu14.10.1 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 12916 Depends: libc6 (>= 2.17) Section: science Priority: optional Homepage: http://prodigal.ornl.gov/ Description: Microbial (bacterial and archaeal) gene finding program Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program developed at Oak Ridge National Laboratory and the University of Tennessee. Key features of Prodigal include: . Speed: Prodigal is an extremely fast gene recognition tool (written in very vanilla C). It can analyze an entire microbial genome in 30 seconds or less. . Accuracy: Prodigal is a highly accurate gene finder. It correctly locates the 3' end of every gene in the experimentally verified Ecogene data set (except those containing introns). It possesses a very sophisticated ribosomal binding site scoring system that enables it to locate the translation initiation site with great accuracy (96% of the 5' ends in the Ecogene data set are located correctly). . Specificity: Prodigal's false positive rate compares favorably with other gene identification programs, and usually falls under 5%. . GC-Content Indifferent: Prodigal performs well even in high GC genomes, with over a 90% perfect match (5'+3') to the Pseudomonas aeruginosa curated annotations. . Metagenomic Version: Prodigal can run in metagenomic mode and analyze sequences even when the organism is unknown. . Ease of Use: Prodigal can be run in one step on a single genomic sequence or on a draft genome containing many sequences. It does not need to be supplied with any knowledge of the organism, as it learns all the properties it needs to on its own. chroot-autobuild/build/buildd/prodigal_2.6.1-1~ubuntu14.10.1_arm64.deb: drwxr-xr-x root/root 0 2015-02-21 22:20 ./ drwxr-xr-x root/root 0 2015-02-21 22:20 ./usr/ drwxr-xr-x root/root 0 2015-02-21 22:20 ./usr/share/ drwxr-xr-x root/root 0 2015-02-21 22:20 ./usr/share/man/ drwxr-xr-x root/root 0 2015-02-21 22:20 ./usr/share/man/man1/ -rw-r--r-- root/root 855 2015-02-21 22:20 ./usr/share/man/man1/prodigal.1.gz drwxr-xr-x root/root 0 2015-02-21 22:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2015-02-21 22:20 ./usr/share/doc/prodigal/ -rw-r--r-- root/root 517 2015-02-21 21:45 ./usr/share/doc/prodigal/changelog.Debian.gz -rw-r--r-- root/root 2694 2014-08-21 00:45 ./usr/share/doc/prodigal/README.md -rw-r--r-- root/root 1140 2014-07-28 15:28 ./usr/share/doc/prodigal/copyright drwxr-xr-x root/root 0 2015-02-21 22:20 ./usr/bin/ -rwxr-xr-x root/root 13183288 2015-02-21 22:20 ./usr/bin/prodigal prodigal_2.6.1-1~ubuntu14.10.1_arm64.changes: Format: 1.8 Date: Sat, 21 Feb 2015 22:45:28 +0100 Source: prodigal Binary: prodigal Architecture: arm64 Version: 1:2.6.1-1~ubuntu14.10.1 Distribution: utopic-backports Urgency: medium Maintainer: Ubuntu Build Daemon Changed-By: Felix Geyer Description: prodigal - Microbial (bacterial and archaeal) gene finding program Launchpad-Bugs-Fixed: 1415175 Changes: prodigal (1:2.6.1-1~ubuntu14.10.1) utopic-backports; urgency=medium . * No-change backport to utopic (LP: #1415175) Checksums-Sha1: bd31ccd2716c3a98e012154cdf18c5bde64dd17b 889062 prodigal_2.6.1-1~ubuntu14.10.1_arm64.deb Checksums-Sha256: 2d480e55f3b467addded4fb014f5afdd272292f8d3ace35c53a8cf3bc0682c0d 889062 prodigal_2.6.1-1~ubuntu14.10.1_arm64.deb Files: c98ddb2c22de80122b4c27247569ad90 889062 science optional prodigal_2.6.1-1~ubuntu14.10.1_arm64.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20150221-2220 Build needed 00:27:34, 68960k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-7001183'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-7001183/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-7001183'] Unmounting chroot for build PACKAGEBUILD-7001183... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-7001183'] Removing build PACKAGEBUILD-7001183