https://launchpad.net/ubuntu/+source/prody/2.3.1+dfsg-2/+build/24905025 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux riscv64-qemu-lgw01-074 5.13.0-1019-generic #21~20.04.1-Ubuntu SMP Thu Mar 24 22:36:01 UTC 2022 riscv64 Buildd toolchain package versions: launchpad-buildd_222~591~ubuntu20.04.1 python3-lpbuildd_222~591~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git_1:2.25.1-1ubuntu3.2 dpkg-dev_1.19.7ubuntu3 python3-debian_0.1.36ubuntu1. Syncing the system clock with the buildd NTP service... 6 Dec 17:24:58 ntpdate[110288]: adjust time server 10.211.37.1 offset -0.000326 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=lunar --arch=riscv64 PACKAGEBUILD-24905025 --image-type chroot /home/buildd/filecache-default/bd2efcf6731aa872623249a0b7bfd1b3d3fdc231 Creating target for build PACKAGEBUILD-24905025 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=lunar --arch=riscv64 PACKAGEBUILD-24905025 Starting target for build PACKAGEBUILD-24905025 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=lunar --arch=riscv64 PACKAGEBUILD-24905025 'deb http://ftpmaster.internal/ubuntu lunar main universe' 'deb http://ftpmaster.internal/ubuntu lunar-security main universe' 'deb http://ftpmaster.internal/ubuntu lunar-updates main universe' 'deb http://ftpmaster.internal/ubuntu lunar-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-24905025 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=lunar --arch=riscv64 PACKAGEBUILD-24905025 Updating target for build PACKAGEBUILD-24905025 Get:1 http://ftpmaster.internal/ubuntu lunar InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu lunar-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu lunar-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu lunar-proposed InRelease [118 kB] Get:5 http://ftpmaster.internal/ubuntu lunar/main riscv64 Packages [1301 kB] Get:6 http://ftpmaster.internal/ubuntu lunar/main Translation-en [510 kB] Get:7 http://ftpmaster.internal/ubuntu lunar/universe riscv64 Packages [13.6 MB] Get:8 http://ftpmaster.internal/ubuntu lunar/universe Translation-en [5857 kB] Get:9 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 Packages [180 kB] Get:10 http://ftpmaster.internal/ubuntu lunar-proposed/main Translation-en [80.3 kB] Get:11 http://ftpmaster.internal/ubuntu lunar-proposed/universe riscv64 Packages [905 kB] Get:12 http://ftpmaster.internal/ubuntu lunar-proposed/universe Translation-en [393 kB] Fetched 23.4 MB in 38s (615 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libperl5.34 perl-modules-5.34 Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: lsb-base* The following NEW packages will be installed: libmd0 libperl5.36 perl-modules-5.36 The following packages will be upgraded: adduser advancecomp apt binutils binutils-common binutils-riscv64-linux-gnu bsdutils ca-certificates debconf debianutils dpkg dpkg-dev e2fsprogs fakeroot gpg gpg-agent gpgconf gpgv grep init init-system-helpers libacl1 libapparmor1 libapt-pkg6.0 libassuan0 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libcap-ng0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdpkg-perl libext2fs2 libfakeroot libfdisk1 libffi8 libgmp10 libgpg-error0 libgssapi-krb5-2 libip4tc2 libjson-c5 libk5crypto3 libkrb5-3 libkrb5support0 liblz4-1 liblzma5 libmount1 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpng16-16 libreadline8 libseccomp2 libselinux1 libsmartcols1 libsqlite3-0 libss2 libssl3 libuuid1 linux-libc-dev login logsave mount openssl passwd perl perl-base pinentry-curses readline-common sysvinit-utils tar tzdata usrmerge util-linux util-linux-extra xz-utils zlib1g 84 upgraded, 3 newly installed, 1 to remove and 0 not upgraded. Need to get 29.4 MB of archives. After this operation, 43.2 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu lunar/main riscv64 bsdutils riscv64 1:2.38.1-4ubuntu1 [92.5 kB] Get:2 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 debianutils riscv64 5.7-0.4 [102 kB] Get:3 http://ftpmaster.internal/ubuntu lunar/main riscv64 libmd0 riscv64 1.0.4-2 [29.4 kB] Get:4 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 liblz4-1 riscv64 1.9.4-1 [74.7 kB] Get:5 http://ftpmaster.internal/ubuntu lunar/main riscv64 liblzma5 riscv64 5.2.9-0.0 [96.4 kB] Get:6 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 zlib1g riscv64 1:1.2.13.dfsg-1ubuntu2 [53.9 kB] Get:7 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libapt-pkg6.0 riscv64 2.5.4 [918 kB] Get:8 http://ftpmaster.internal/ubuntu lunar/main riscv64 tar riscv64 1.34+dfsg-1.1 [271 kB] Get:9 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 dpkg riscv64 1.21.12ubuntu1 [1299 kB] Get:10 http://ftpmaster.internal/ubuntu lunar/main riscv64 grep riscv64 3.8-3 [154 kB] Get:11 http://ftpmaster.internal/ubuntu lunar/main riscv64 login riscv64 1:4.13+dfsg1-1ubuntu1 [195 kB] Get:12 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 perl-modules-5.36 all 5.36.0-4ubuntu2 [2984 kB] Get:13 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libperl5.36 riscv64 5.36.0-4ubuntu2 [4200 kB] Get:14 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 perl riscv64 5.36.0-4ubuntu2 [235 kB] Get:15 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 perl-base riscv64 5.36.0-4ubuntu2 [1649 kB] Get:16 http://ftpmaster.internal/ubuntu lunar/main riscv64 libcrypt-dev riscv64 1:4.4.33-1 [235 kB] Get:17 http://ftpmaster.internal/ubuntu lunar/main riscv64 libcrypt1 riscv64 1:4.4.33-1 [93.4 kB] Get:18 http://ftpmaster.internal/ubuntu lunar/main riscv64 libaudit-common all 1:3.0.7-1ubuntu2 [5018 B] Get:19 http://ftpmaster.internal/ubuntu lunar/main riscv64 libcap-ng0 riscv64 0.8.3-1build1 [13.5 kB] Get:20 http://ftpmaster.internal/ubuntu lunar/main riscv64 libaudit1 riscv64 1:3.0.7-1ubuntu2 [44.0 kB] Get:21 http://ftpmaster.internal/ubuntu lunar/main riscv64 libsmartcols1 riscv64 2.38.1-4ubuntu1 [101 kB] Get:22 http://ftpmaster.internal/ubuntu lunar/main riscv64 util-linux-extra riscv64 2.38.1-4ubuntu1 [104 kB] Get:23 http://ftpmaster.internal/ubuntu lunar/main riscv64 util-linux riscv64 2.38.1-4ubuntu1 [1150 kB] Get:24 http://ftpmaster.internal/ubuntu lunar/main riscv64 usrmerge all 33ubuntu1 [57.0 kB] Get:25 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 init-system-helpers all 1.65.2 [38.1 kB] Get:26 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 sysvinit-utils riscv64 3.05-7ubuntu1 [26.4 kB] Get:27 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 debconf all 1.5.80 [125 kB] Get:28 http://ftpmaster.internal/ubuntu lunar/main riscv64 libpam0g riscv64 1.5.2-5ubuntu1 [56.1 kB] Get:29 http://ftpmaster.internal/ubuntu lunar/main riscv64 libselinux1 riscv64 3.4-1build1 [71.3 kB] Get:30 http://ftpmaster.internal/ubuntu lunar/main riscv64 libpam-modules-bin riscv64 1.5.2-5ubuntu1 [43.1 kB] Get:31 http://ftpmaster.internal/ubuntu lunar/main riscv64 libpam-modules riscv64 1.5.2-5ubuntu1 [265 kB] Get:32 http://ftpmaster.internal/ubuntu lunar/main riscv64 passwd riscv64 1:4.13+dfsg1-1ubuntu1 [807 kB] Get:33 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 adduser all 3.129ubuntu1 [59.0 kB] Get:34 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libgpg-error0 riscv64 1.46-1 [62.1 kB] Get:35 http://ftpmaster.internal/ubuntu lunar/main riscv64 gpgv riscv64 2.2.40-1ubuntu1 [202 kB] Get:36 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 apt riscv64 2.5.4 [1338 kB] Get:37 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 logsave riscv64 1.46.6~rc1-1ubuntu1 [9998 B] Get:38 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libext2fs2 riscv64 1.46.6~rc1-1ubuntu1 [192 kB] Get:39 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 e2fsprogs riscv64 1.46.6~rc1-1ubuntu1 [547 kB] Get:40 http://ftpmaster.internal/ubuntu lunar/main riscv64 mount riscv64 2.38.1-4ubuntu1 [129 kB] Get:41 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 init riscv64 1.65.2 [4812 B] Get:42 http://ftpmaster.internal/ubuntu lunar/main riscv64 libacl1 riscv64 2.3.1-2 [15.6 kB] Get:43 http://ftpmaster.internal/ubuntu lunar/main riscv64 libattr1 riscv64 1:2.5.1-3 [9852 B] Get:44 http://ftpmaster.internal/ubuntu lunar/main riscv64 libblkid1 riscv64 2.38.1-4ubuntu1 [146 kB] Get:45 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libgmp10 riscv64 2:6.2.1+dfsg1-1.1ubuntu1 [245 kB] Get:46 http://ftpmaster.internal/ubuntu lunar/main riscv64 libmount1 riscv64 2.38.1-4ubuntu1 [155 kB] Get:47 http://ftpmaster.internal/ubuntu lunar/main riscv64 libpam-runtime all 1.5.2-5ubuntu1 [40.0 kB] Get:48 http://ftpmaster.internal/ubuntu lunar/main riscv64 libuuid1 riscv64 2.38.1-4ubuntu1 [24.9 kB] Get:49 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libffi8 riscv64 3.4.4-1 [21.2 kB] Get:50 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libcom-err2 riscv64 1.46.6~rc1-1ubuntu1 [8672 B] Get:51 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libss2 riscv64 1.46.6~rc1-1ubuntu1 [10.6 kB] Get:52 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libssl3 riscv64 3.0.5-2ubuntu2 [1437 kB] Get:53 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 openssl riscv64 3.0.5-2ubuntu2 [1140 kB] Get:54 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 ca-certificates all 20211016ubuntu1 [141 kB] Get:55 http://ftpmaster.internal/ubuntu lunar/main riscv64 libapparmor1 riscv64 3.0.7-1ubuntu4 [33.4 kB] Get:56 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libjson-c5 riscv64 0.16-2 [28.6 kB] Get:57 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libcryptsetup12 riscv64 2:2.5.0-6ubuntu3 [190 kB] Get:58 http://ftpmaster.internal/ubuntu lunar/main riscv64 libfdisk1 riscv64 2.38.1-4ubuntu1 [194 kB] Get:59 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libgssapi-krb5-2 riscv64 1.20.1-1 [125 kB] Get:60 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libkrb5-3 riscv64 1.20.1-1 [329 kB] Get:61 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libkrb5support0 riscv64 1.20.1-1 [30.0 kB] Get:62 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libk5crypto3 riscv64 1.20.1-1 [96.5 kB] Get:63 http://ftpmaster.internal/ubuntu lunar/main riscv64 libip4tc2 riscv64 1.8.7-1ubuntu7 [17.9 kB] Get:64 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 readline-common all 8.2-1.2 [55.2 kB] Get:65 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libreadline8 riscv64 8.2-1.2 [130 kB] Get:66 http://ftpmaster.internal/ubuntu lunar/main riscv64 libseccomp2 riscv64 2.5.4-1ubuntu2 [44.2 kB] Get:67 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libsqlite3-0 riscv64 3.40.0-1 [583 kB] Get:68 http://ftpmaster.internal/ubuntu lunar/main riscv64 tzdata all 2022g-0ubuntu2 [401 kB] Get:69 http://ftpmaster.internal/ubuntu lunar/main riscv64 libpng16-16 riscv64 1.6.39-2 [174 kB] Get:70 http://ftpmaster.internal/ubuntu lunar/main riscv64 xz-utils riscv64 5.2.9-0.0 [139 kB] Get:71 http://ftpmaster.internal/ubuntu lunar/main riscv64 advancecomp riscv64 2.4-1 [9196 B] Get:72 http://ftpmaster.internal/ubuntu lunar/main riscv64 libctf0 riscv64 2.39-8ubuntu2 [87.0 kB] Get:73 http://ftpmaster.internal/ubuntu lunar/main riscv64 libctf-nobfd0 riscv64 2.39-8ubuntu2 [88.4 kB] Get:74 http://ftpmaster.internal/ubuntu lunar/main riscv64 binutils-riscv64-linux-gnu riscv64 2.39-8ubuntu2 [814 kB] Get:75 http://ftpmaster.internal/ubuntu lunar/main riscv64 libbinutils riscv64 2.39-8ubuntu2 [409 kB] Get:76 http://ftpmaster.internal/ubuntu lunar/main riscv64 binutils riscv64 2.39-8ubuntu2 [3022 B] Get:77 http://ftpmaster.internal/ubuntu lunar/main riscv64 binutils-common riscv64 2.39-8ubuntu2 [216 kB] Get:78 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 dpkg-dev all 1.21.12ubuntu1 [1071 kB] Get:79 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libdpkg-perl all 1.21.12ubuntu1 [242 kB] Get:80 http://ftpmaster.internal/ubuntu lunar/main riscv64 libfakeroot riscv64 1.30.1-1ubuntu1 [26.4 kB] Get:81 http://ftpmaster.internal/ubuntu lunar/main riscv64 fakeroot riscv64 1.30.1-1ubuntu1 [67.9 kB] Get:82 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libassuan0 riscv64 2.5.5-5 [31.7 kB] Get:83 http://ftpmaster.internal/ubuntu lunar/main riscv64 pinentry-curses riscv64 1.2.1-1ubuntu1 [36.0 kB] Get:84 http://ftpmaster.internal/ubuntu lunar/main riscv64 gpg riscv64 2.2.40-1ubuntu1 [491 kB] Get:85 http://ftpmaster.internal/ubuntu lunar/main riscv64 gpgconf riscv64 2.2.40-1ubuntu1 [119 kB] Get:86 http://ftpmaster.internal/ubuntu lunar/main riscv64 gpg-agent riscv64 2.2.40-1ubuntu1 [239 kB] Get:87 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 linux-libc-dev riscv64 5.19.0-23.24 [1314 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 29.4 MB in 10s (3066 kB/s) (Reading database ... 13478 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.38.1-4ubuntu1_riscv64.deb ... Unpacking bsdutils (1:2.38.1-4ubuntu1) over (1:2.38-4ubuntu1) ... Setting up bsdutils (1:2.38.1-4ubuntu1) ... (Reading database ... 13478 files and directories currently installed.) Preparing to unpack .../debianutils_5.7-0.4_riscv64.deb ... Unpacking debianutils (5.7-0.4) over (5.7-0.3) ... Setting up debianutils (5.7-0.4) ... Selecting previously unselected package libmd0:riscv64. (Reading database ... 13478 files and directories currently installed.) Preparing to unpack .../libmd0_1.0.4-2_riscv64.deb ... Unpacking libmd0:riscv64 (1.0.4-2) ... Setting up libmd0:riscv64 (1.0.4-2) ... (Reading database ... 13483 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.9.4-1_riscv64.deb ... Unpacking liblz4-1:riscv64 (1.9.4-1) over (1.9.3-2build2) ... Setting up liblz4-1:riscv64 (1.9.4-1) ... (Reading database ... 13483 files and directories currently installed.) 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Processing triggers for ca-certificates (20211016ubuntu1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-24905025 riscv64 lunar-proposed -c chroot:build-PACKAGEBUILD-24905025 --arch=riscv64 --dist=lunar-proposed --nolog prody_2.3.1+dfsg-2.dsc Initiating build PACKAGEBUILD-24905025 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 5.13.0-1019-generic #21~20.04.1-Ubuntu SMP Thu Mar 24 22:36:01 UTC 2022 riscv64 sbuild (Debian sbuild) 0.79.0 (05 February 2020) on riscv64-qemu-lgw01-074.buildd +==============================================================================+ | prody 2.3.1+dfsg-2 (riscv64) Tue, 06 Dec 2022 17:37:06 +0000 | +==============================================================================+ Package: prody Version: 2.3.1+dfsg-2 Source Version: 2.3.1+dfsg-2 Distribution: lunar-proposed Machine Architecture: riscv64 Host Architecture: riscv64 Build Architecture: riscv64 Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-24905025/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/prody-TCbxHc/resolver-JPPGR6' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- prody_2.3.1+dfsg-2.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/prody-TCbxHc/prody-2.3.1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/prody-TCbxHc' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-biopython, python3-numpy, python3-pyparsing, python3-scipy, python3-setuptools, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-biopython, python3-numpy, python3-pyparsing, python3-scipy, python3-setuptools, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [426 B] Get:5 copy:/<>/apt_archive ./ Packages [498 B] Fetched 1881 B in 1s (3285 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.34 perl-modules-5.34 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-urw-base35 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libboost-dev libboost1.74-dev libbrotli1 libbsd0 libdebhelper-perl libdeflate0 libdw1 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontenc1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libicu71 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libmagic-mgc libmagic1 libmpdec3 libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libopenjp2-7 libpipeline1 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal libpython3.10-stdlib libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libraqm0 libsub-override-perl libtiff5 libtool libuchardet0 libwebp7 libwebpdemux2 libwebpmux3 libxau6 libxcb1 libxdmcp6 libxml2 libxsimd-dev m4 mailcap man-db media-types mime-support po-debconf python3 python3-all python3-all-dev python3-beniget python3-biopython python3-decorator python3-dev python3-distutils python3-gast python3-lib2to3 python3-minimal python3-numpy python3-pil python3-pkg-resources python3-ply python3-pyparsing python3-pythran python3-renderpm python3-reportlab python3-reportlab-accel python3-scipy python3-setuptools python3.10 python3.10-dev python3.10-minimal python3.11 python3.11-dev python3.11-minimal sgml-base w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make flit python3-build python3-tomli python3-installer fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre gettext-doc libasprintf-dev libgettextpo-dev groff libboost-doc libboost1.74-doc libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev libboost-context1.74-dev libboost-contract1.74-dev libboost-coroutine1.74-dev libboost-date-time1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev libboost-filesystem1.74-dev libboost-graph1.74-dev libboost-graph-parallel1.74-dev libboost-iostreams1.74-dev libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev libboost-program-options1.74-dev libboost-python1.74-dev libboost-random1.74-dev libboost-regex1.74-dev libboost-serialization1.74-dev libboost-stacktrace1.74-dev libboost-system1.74-dev libboost-test1.74-dev libboost-thread1.74-dev libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev low-memory-monitor liblcms2-utils libtool-doc gfortran | fortran95-compiler gcj-jdk libxsimd-doc m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv bwa clustalo clustalw dialign dssp emboss fasttree mafft muscle3 phylip phyml prank probcons python3-mysqldb python3-matplotlib python3-mmtf python3-rdflib python3-psycopg2 raxml samtools t-coffee wise gfortran python-numpy-doc python3-pytest python-pil-doc python-ply-doc python-pyparsing-doc pdf-viewer python3-egenix-mxtexttools python-reportlab-doc python-scipy-doc python-setuptools-doc python3.10-venv python3.10-doc binfmt-support python3.11-venv python3.11-doc sgml-base-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common libltdl-dev libmail-sendmail-perl python-biopython-doc ncbi-blast+ python3-olefile The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-urw-base35 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libboost-dev libboost1.74-dev libbrotli1 libbsd0 libdebhelper-perl libdeflate0 libdw1 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontenc1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libicu71 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libmagic-mgc libmagic1 libmpdec3 libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libopenjp2-7 libpipeline1 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal libpython3.10-stdlib libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libraqm0 libsub-override-perl libtiff5 libtool libuchardet0 libwebp7 libwebpdemux2 libwebpmux3 libxau6 libxcb1 libxdmcp6 libxml2 libxsimd-dev m4 mailcap man-db media-types mime-support po-debconf python3 python3-all python3-all-dev python3-beniget python3-biopython python3-decorator python3-dev python3-distutils python3-gast python3-lib2to3 python3-minimal python3-numpy python3-pil python3-pkg-resources python3-ply python3-pyparsing python3-pythran python3-renderpm python3-reportlab python3-reportlab-accel python3-scipy python3-setuptools python3.10 python3.10-dev python3.10-minimal python3.11 python3.11-dev python3.11-minimal sbuild-build-depends-main-dummy sgml-base w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core zlib1g-dev 0 upgraded, 124 newly installed, 0 to remove and 0 not upgraded. Need to get 119 MB of archives. After this operation, 694 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [716 B] Get:2 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libpython3.10-minimal riscv64 3.10.8-3 [788 kB] Get:3 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libexpat1 riscv64 2.5.0-1 [77.1 kB] Get:4 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 python3.10-minimal riscv64 3.10.8-3 [1787 kB] Get:5 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 python3-minimal riscv64 3.10.6-1ubuntu1 [24.1 kB] Get:6 http://ftpmaster.internal/ubuntu lunar/main riscv64 media-types all 8.0.0 [24.9 kB] Get:7 http://ftpmaster.internal/ubuntu lunar/main riscv64 mailcap all 3.70+nmu1ubuntu1 [23.8 kB] Get:8 http://ftpmaster.internal/ubuntu lunar/main riscv64 mime-support all 3.66 [3696 B] Get:9 http://ftpmaster.internal/ubuntu lunar/main riscv64 libmpdec3 riscv64 2.5.1-2build2 [85.3 kB] Get:10 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libpython3.10-stdlib riscv64 3.10.8-3 [1695 kB] Get:11 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 python3.10 riscv64 3.10.8-3 [499 kB] Get:12 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libpython3-stdlib riscv64 3.10.6-1ubuntu1 [6880 B] Get:13 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 python3 riscv64 3.10.6-1ubuntu1 [22.3 kB] Get:14 http://ftpmaster.internal/ubuntu lunar/main riscv64 libpython3.11-minimal riscv64 3.11.0-3 [816 kB] Get:15 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3.11-minimal riscv64 3.11.0-3 [1876 kB] Get:16 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 sgml-base all 1.31 [11.4 kB] Get:17 http://ftpmaster.internal/ubuntu lunar/main riscv64 libbsd0 riscv64 0.11.7-1 [40.1 kB] Get:18 http://ftpmaster.internal/ubuntu lunar/main riscv64 libelf1 riscv64 0.188-1 [47.0 kB] Get:19 http://ftpmaster.internal/ubuntu lunar/main riscv64 libfribidi0 riscv64 1.0.8-2.1ubuntu1 [25.8 kB] Get:20 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libglib2.0-0 riscv64 2.74.2-1 [1309 kB] Get:21 http://ftpmaster.internal/ubuntu lunar/main riscv64 libicu71 riscv64 71.1-3ubuntu1 [10.5 MB] Get:22 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libxml2 riscv64 2.9.14+dfsg-1.1 [598 kB] Get:23 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 python3-pkg-resources all 65.5.0-1 [208 kB] Get:24 http://ftpmaster.internal/ubuntu lunar/main riscv64 bsdextrautils riscv64 2.38.1-4ubuntu1 [81.6 kB] Get:25 http://ftpmaster.internal/ubuntu lunar/main riscv64 libmagic-mgc riscv64 1:5.41-4 [257 kB] Get:26 http://ftpmaster.internal/ubuntu lunar/main riscv64 libmagic1 riscv64 1:5.41-4 [88.7 kB] Get:27 http://ftpmaster.internal/ubuntu lunar/main riscv64 file riscv64 1:5.41-4 [20.6 kB] Get:28 http://ftpmaster.internal/ubuntu lunar/main riscv64 gettext-base riscv64 0.21-10 [38.4 kB] Get:29 http://ftpmaster.internal/ubuntu lunar/main riscv64 libuchardet0 riscv64 0.0.7-1build2 [78.9 kB] Get:30 http://ftpmaster.internal/ubuntu lunar/main riscv64 groff-base riscv64 1.22.4-9 [906 kB] Get:31 http://ftpmaster.internal/ubuntu lunar/main riscv64 libpipeline1 riscv64 1.5.7-1 [26.8 kB] Get:32 http://ftpmaster.internal/ubuntu lunar/main riscv64 libxau6 riscv64 1:1.0.9-1build5 [6836 B] Get:33 http://ftpmaster.internal/ubuntu lunar/main riscv64 libxdmcp6 riscv64 1:1.1.3-0ubuntu5 [10.3 kB] Get:34 http://ftpmaster.internal/ubuntu lunar/main riscv64 libxcb1 riscv64 1.15-1 [42.1 kB] Get:35 http://ftpmaster.internal/ubuntu lunar/main riscv64 man-db riscv64 2.11.1-1 [1178 kB] Get:36 http://ftpmaster.internal/ubuntu lunar/main riscv64 m4 riscv64 1.4.19-1 [243 kB] Get:37 http://ftpmaster.internal/ubuntu lunar/main riscv64 autoconf all 2.71-2 [338 kB] Get:38 http://ftpmaster.internal/ubuntu lunar/main riscv64 autotools-dev all 20220109.1 [44.9 kB] Get:39 http://ftpmaster.internal/ubuntu lunar/main riscv64 automake all 1:1.16.5-1.3 [558 kB] Get:40 http://ftpmaster.internal/ubuntu lunar/main riscv64 autopoint all 0.21-10 [421 kB] Get:41 http://ftpmaster.internal/ubuntu lunar/main riscv64 libdebhelper-perl all 13.10.1ubuntu1 [67.1 kB] Get:42 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libtool all 2.4.7-5 [166 kB] Get:43 http://ftpmaster.internal/ubuntu lunar/main riscv64 dh-autoreconf all 20 [16.1 kB] Get:44 http://ftpmaster.internal/ubuntu lunar/main riscv64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:45 http://ftpmaster.internal/ubuntu lunar/main riscv64 libsub-override-perl all 0.09-4 [8706 B] Get:46 http://ftpmaster.internal/ubuntu lunar/main riscv64 libfile-stripnondeterminism-perl all 1.13.0-2 [18.2 kB] Get:47 http://ftpmaster.internal/ubuntu lunar/main riscv64 dh-strip-nondeterminism all 1.13.0-2 [5308 B] Get:48 http://ftpmaster.internal/ubuntu lunar/main riscv64 libdw1 riscv64 0.188-1 [227 kB] Get:49 http://ftpmaster.internal/ubuntu lunar/main riscv64 debugedit riscv64 1:5.0-5 [48.8 kB] Get:50 http://ftpmaster.internal/ubuntu lunar/main riscv64 dwz riscv64 0.14+20220924-2 [115 kB] Get:51 http://ftpmaster.internal/ubuntu lunar/main riscv64 gettext riscv64 0.21-10 [811 kB] Get:52 http://ftpmaster.internal/ubuntu lunar/main riscv64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:53 http://ftpmaster.internal/ubuntu lunar/main riscv64 po-debconf all 1.0.21+nmu1 [233 kB] Get:54 http://ftpmaster.internal/ubuntu lunar/main riscv64 debhelper all 13.10.1ubuntu1 [924 kB] Get:55 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3-lib2to3 all 3.10.8-1 [77.5 kB] Get:56 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3-distutils all 3.10.8-1 [139 kB] Get:57 http://ftpmaster.internal/ubuntu lunar/universe riscv64 dh-python all 5.20221202 [96.0 kB] Get:58 http://ftpmaster.internal/ubuntu lunar/main riscv64 libfontenc1 riscv64 1:1.1.4-1build3 [13.2 kB] Get:59 http://ftpmaster.internal/ubuntu lunar/main riscv64 libbrotli1 riscv64 1.0.9-2build7 [324 kB] Get:60 http://ftpmaster.internal/ubuntu lunar/main riscv64 libfreetype6 riscv64 2.12.1+dfsg-3 [359 kB] Get:61 http://ftpmaster.internal/ubuntu lunar/main riscv64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] Get:62 http://ftpmaster.internal/ubuntu lunar/main riscv64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] Get:63 http://ftpmaster.internal/ubuntu lunar/main riscv64 xfonts-utils riscv64 1:7.7+6build2 [92.1 kB] Get:64 http://ftpmaster.internal/ubuntu lunar/main riscv64 fonts-urw-base35 all 20200910-6 [6588 kB] Get:65 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libblas3 riscv64 3.11.0-2 [123 kB] Get:66 http://ftpmaster.internal/ubuntu lunar/main riscv64 libboost1.74-dev riscv64 1.74.0-17ubuntu2 [9589 kB] Get:67 http://ftpmaster.internal/ubuntu lunar/main riscv64 libboost-dev riscv64 1.74.0.3ubuntu7 [3492 B] Get:68 http://ftpmaster.internal/ubuntu lunar/main riscv64 libdeflate0 riscv64 1.14-1 [52.8 kB] Get:69 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libexpat1-dev riscv64 2.5.0-1 [292 kB] Get:70 http://ftpmaster.internal/ubuntu lunar/main riscv64 libgfortran5 riscv64 12.2.0-9ubuntu1 [386 kB] Get:71 http://ftpmaster.internal/ubuntu lunar/main riscv64 libgraphite2-3 riscv64 1.3.14-1build2 [71.5 kB] Get:72 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libharfbuzz0b riscv64 5.2.0-2 [434 kB] Get:73 http://ftpmaster.internal/ubuntu lunar/main riscv64 libimagequant0 riscv64 2.17.0-1 [32.1 kB] Get:74 http://ftpmaster.internal/ubuntu lunar/main riscv64 libjpeg-turbo8 riscv64 2.1.2-0ubuntu1 [113 kB] Get:75 http://ftpmaster.internal/ubuntu lunar/main riscv64 libjpeg8 riscv64 8c-2ubuntu10 [2270 B] Get:76 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] Get:77 http://ftpmaster.internal/ubuntu lunar/main riscv64 libjs-underscore all 1.13.4~dfsg+~1.11.4-2 [118 kB] Get:78 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libjs-sphinxdoc all 5.3.0-2 [129 kB] Get:79 http://ftpmaster.internal/ubuntu lunar/universe riscv64 libopenblas0-pthread riscv64 0.3.21+ds-3 [2881 kB] Get:80 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 liblapack3 riscv64 3.11.0-2 [1962 kB] Get:81 http://ftpmaster.internal/ubuntu lunar/universe riscv64 liblbfgsb0 riscv64 3.0+dfsg.3-11 [26.4 kB] Get:82 http://ftpmaster.internal/ubuntu lunar/main riscv64 liblcms2-2 riscv64 2.13.1-1 [143 kB] Get:83 http://ftpmaster.internal/ubuntu lunar/main riscv64 liblerc4 riscv64 4.0.0+ds-2ubuntu2 [172 kB] Get:84 http://ftpmaster.internal/ubuntu lunar/universe riscv64 libopenblas0 riscv64 0.3.21+ds-3 [6102 B] Get:85 http://ftpmaster.internal/ubuntu lunar/universe riscv64 libopenblas-pthread-dev riscv64 0.3.21+ds-3 [7014 kB] Get:86 http://ftpmaster.internal/ubuntu lunar/universe riscv64 libopenblas-dev riscv64 0.3.21+ds-3 [18.7 kB] Get:87 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libpython3.10 riscv64 3.10.8-3 [1732 kB] Get:88 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 zlib1g-dev riscv64 1:1.2.13.dfsg-1ubuntu2 [957 kB] Get:89 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libpython3.10-dev riscv64 3.10.8-3 [12.7 MB] Get:90 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libpython3-dev riscv64 3.10.6-1ubuntu1 [7134 B] Get:91 http://ftpmaster.internal/ubuntu lunar/main riscv64 libpython3.11-stdlib riscv64 3.11.0-3 [1723 kB] Get:92 http://ftpmaster.internal/ubuntu lunar/main riscv64 libpython3.11 riscv64 3.11.0-3 [1929 kB] Get:93 http://ftpmaster.internal/ubuntu lunar/main riscv64 libpython3.11-dev riscv64 3.11.0-3 [13.9 MB] Get:94 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 libpython3-all-dev riscv64 3.10.6-1ubuntu1 [928 B] Get:95 http://ftpmaster.internal/ubuntu lunar/main riscv64 libraqm0 riscv64 0.7.0-4ubuntu1 [10.4 kB] Get:96 http://ftpmaster.internal/ubuntu lunar/main riscv64 libjbig0 riscv64 2.1-6ubuntu1 [27.8 kB] Get:97 http://ftpmaster.internal/ubuntu lunar/main riscv64 libwebp7 riscv64 1.2.2-2build1 [163 kB] Get:98 http://ftpmaster.internal/ubuntu lunar/main riscv64 libtiff5 riscv64 4.4.0-6ubuntu1 [171 kB] Get:99 http://ftpmaster.internal/ubuntu lunar/main riscv64 libwebpdemux2 riscv64 1.2.2-2build1 [9004 B] Get:100 http://ftpmaster.internal/ubuntu lunar/main riscv64 libwebpmux3 riscv64 1.2.2-2build1 [18.3 kB] Get:101 http://ftpmaster.internal/ubuntu lunar/universe riscv64 libxsimd-dev riscv64 8.1.0-7 [90.7 kB] Get:102 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3.11 riscv64 3.11.0-3 [553 kB] Get:103 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 python3-all riscv64 3.10.6-1ubuntu1 [914 B] Get:104 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 python3.10-dev riscv64 3.10.8-3 [500 kB] Get:105 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 python3-dev riscv64 3.10.6-1ubuntu1 [26.0 kB] Get:106 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3.11-dev riscv64 3.11.0-3 [500 kB] Get:107 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 python3-all-dev riscv64 3.10.6-1ubuntu1 [924 B] Get:108 http://ftpmaster.internal/ubuntu lunar/universe riscv64 python3-gast all 0.5.2-2 [9394 B] Get:109 http://ftpmaster.internal/ubuntu lunar/universe riscv64 python3-beniget all 0.4.1-3 [10.0 kB] Get:110 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3-numpy riscv64 1:1.21.5-1ubuntu1 [3435 kB] Get:111 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3-renderpm riscv64 3.6.11-1build1 [58.8 kB] Get:112 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3-reportlab-accel riscv64 3.6.11-1build1 [21.9 kB] Get:113 http://ftpmaster.internal/ubuntu lunar/main riscv64 libopenjp2-7 riscv64 2.5.0-1 [173 kB] Get:114 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3-pil riscv64 9.2.0-1.1ubuntu1 [413 kB] Get:115 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3-reportlab all 3.6.11-1build1 [563 kB] Get:116 http://ftpmaster.internal/ubuntu lunar/main riscv64 xml-core all 0.18+nmu1 [21.6 kB] Get:117 http://ftpmaster.internal/ubuntu lunar/universe riscv64 w3c-sgml-lib all 1.3-3 [280 kB] Get:118 http://ftpmaster.internal/ubuntu lunar-proposed/universe riscv64 python3-biopython riscv64 1.80+dfsg-2 [1629 kB] Get:119 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] Get:120 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3-ply all 3.11-5 [47.5 kB] Get:121 http://ftpmaster.internal/ubuntu lunar/main riscv64 python3-pyparsing all 3.0.7-3 [82.1 kB] Get:122 http://ftpmaster.internal/ubuntu lunar/universe riscv64 python3-pythran riscv64 0.11.0+ds-7 [427 kB] Get:123 http://ftpmaster.internal/ubuntu lunar-proposed/main riscv64 python3-setuptools all 65.5.0-1 [451 kB] Get:124 http://ftpmaster.internal/ubuntu lunar/universe riscv64 python3-scipy riscv64 1.8.1-14 [16.8 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 119 MB in 23s (5180 kB/s) Selecting previously unselected package libpython3.10-minimal:riscv64. (Reading database ... 15436 files and directories currently installed.) Preparing to unpack .../libpython3.10-minimal_3.10.8-3_riscv64.deb ... Unpacking libpython3.10-minimal:riscv64 (3.10.8-3) ... Selecting previously unselected package libexpat1:riscv64. Preparing to unpack .../libexpat1_2.5.0-1_riscv64.deb ... Unpacking libexpat1:riscv64 (2.5.0-1) ... Selecting previously unselected package python3.10-minimal. Preparing to unpack .../python3.10-minimal_3.10.8-3_riscv64.deb ... Unpacking python3.10-minimal (3.10.8-3) ... Setting up libpython3.10-minimal:riscv64 (3.10.8-3) ... Setting up libexpat1:riscv64 (2.5.0-1) ... Setting up python3.10-minimal (3.10.8-3) ... Selecting previously unselected package python3-minimal. (Reading database ... 15739 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.10.6-1ubuntu1_riscv64.deb ... Unpacking python3-minimal (3.10.6-1ubuntu1) ... Selecting previously unselected package media-types. 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Selecting previously unselected package python3-scipy. Preparing to unpack .../111-python3-scipy_1.8.1-14_riscv64.deb ... Unpacking python3-scipy (1.8.1-14) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../112-sbuild-build-depends-main-dummy_0.invalid.0_riscv64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up media-types (8.0.0) ... Setting up libpipeline1:riscv64 (1.5.7-1) ... Setting up libgraphite2-3:riscv64 (1.3.14-1build2) ... Setting up liblcms2-2:riscv64 (2.13.1-1) ... Setting up libicu71:riscv64 (71.1-3ubuntu1) ... Setting up libxau6:riscv64 (1:1.0.9-1build5) ... Setting up libboost1.74-dev:riscv64 (1.74.0-17ubuntu2) ... Setting up liblerc4:riscv64 (4.0.0+ds-2ubuntu2) ... Setting up bsdextrautils (2.38.1-4ubuntu1) ... Setting up libmagic-mgc (1:5.41-4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:riscv64 (2.74.2-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.10.1ubuntu1) ... Setting up libbrotli1:riscv64 (1.0.9-2build7) ... Setting up x11-common (1:7.7+23ubuntu2) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libmagic1:riscv64 (1:5.41-4) ... Setting up libdeflate0:riscv64 (1.14-1) ... Setting up gettext-base (0.21-10) ... Setting up m4 (1.4.19-1) ... Setting up file (1:5.41-4) ... Setting up libjbig0:riscv64 (2.1-6ubuntu1) ... Setting up libxsimd-dev:riscv64 (8.1.0-7) ... Setting up libfontenc1:riscv64 (1:1.1.4-1build3) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:riscv64 (3.11.0-2) ... update-alternatives: using /usr/lib/riscv64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/riscv64-linux-gnu/libblas.so.3 (libblas.so.3-riscv64-linux-gnu) in auto mode Setting up libexpat1-dev:riscv64 (2.5.0-1) ... Setting up libfreetype6:riscv64 (2.12.1+dfsg-3) ... Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... Setting up libfribidi0:riscv64 (1.0.8-2.1ubuntu1) ... Setting up libimagequant0:riscv64 (2.17.0-1) ... Setting up autopoint (0.21-10) ... Setting up libjpeg-turbo8:riscv64 (2.1.2-0ubuntu1) ... Setting up libgfortran5:riscv64 (12.2.0-9ubuntu1) ... Setting up autoconf (2.71-2) ... Setting up libwebp7:riscv64 (1.2.2-2build1) ... Setting up zlib1g-dev:riscv64 (1:1.2.13.dfsg-1ubuntu2) ... Setting up libuchardet0:riscv64 (0.0.7-1build2) ... Setting up libmpdec3:riscv64 (2.5.1-2build2) ... Setting up libopenjp2-7:riscv64 (2.5.0-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libharfbuzz0b:riscv64 (5.2.0-2) ... Setting up sgml-base (1.31) ... Setting up libboost-dev:riscv64 (1.74.0.3ubuntu7) ... Setting up libpython3.11-minimal:riscv64 (3.11.0-3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libwebpmux3:riscv64 (1.2.2-2build1) ... Setting up libbsd0:riscv64 (0.11.7-1) ... Setting up mailcap (3.70+nmu1ubuntu1) ... Setting up libelf1:riscv64 (0.188-1) ... Setting up libxml2:riscv64 (2.9.14+dfsg-1.1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-2) ... Setting up libjpeg8:riscv64 (8c-2ubuntu10) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.0-2) ... Setting up python3.11-minimal (3.11.0-3) ... Setting up libdw1:riscv64 (0.188-1) ... Setting up libxdmcp6:riscv64 (1:1.1.3-0ubuntu5) ... Setting up liblapack3:riscv64 (3.11.0-2) ... update-alternatives: using /usr/lib/riscv64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/riscv64-linux-gnu/liblapack.so.3 (liblapack.so.3-riscv64-linux-gnu) in auto mode Setting up libxcb1:riscv64 (1.15-1) ... Setting up gettext (0.21-10) ... Setting up libopenblas0-pthread:riscv64 (0.3.21+ds-3) ... update-alternatives: using /usr/lib/riscv64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/riscv64-linux-gnu/libblas.so.3 (libblas.so.3-riscv64-linux-gnu) in auto mode update-alternatives: using /usr/lib/riscv64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/riscv64-linux-gnu/liblapack.so.3 (liblapack.so.3-riscv64-linux-gnu) in auto mode update-alternatives: using /usr/lib/riscv64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/riscv64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-riscv64-linux-gnu) in auto mode Setting up mime-support (3.66) ... Setting up libtool (2.4.7-5) ... Setting up libwebpdemux2:riscv64 (1.2.2-2build1) ... Setting up libpython3.11-stdlib:riscv64 (3.11.0-3) ... Setting up xfonts-utils (1:7.7+6build2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libpython3.10-stdlib:riscv64 (3.10.8-3) ... Setting up dh-autoreconf (20) ... Setting up libraqm0:riscv64 (0.7.0-4ubuntu1) ... Setting up libjs-sphinxdoc (5.3.0-2) ... Setting up dh-strip-nondeterminism (1.13.0-2) ... Setting up dwz (0.14+20220924-2) ... Setting up libopenblas0:riscv64 (0.3.21+ds-3) ... Setting up groff-base (1.22.4-9) ... Setting up xml-core (0.18+nmu1) ... Setting up debugedit (1:5.0-5) ... Setting up libtiff5:riscv64 (4.4.0-6ubuntu1) ... Setting up libpython3-stdlib:riscv64 (3.10.6-1ubuntu1) ... Setting up liblbfgsb0:riscv64 (3.0+dfsg.3-11) ... Setting up libopenblas-pthread-dev:riscv64 (0.3.21+ds-3) ... update-alternatives: using /usr/lib/riscv64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/riscv64-linux-gnu/libblas.so (libblas.so-riscv64-linux-gnu) in auto mode update-alternatives: using /usr/lib/riscv64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/riscv64-linux-gnu/liblapack.so (liblapack.so-riscv64-linux-gnu) in auto mode update-alternatives: using /usr/lib/riscv64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/riscv64-linux-gnu/libopenblas.so (libopenblas.so-riscv64-linux-gnu) in auto mode Setting up python3.11 (3.11.0-3) ... Setting up libpython3.10:riscv64 (3.10.8-3) ... Setting up python3.10 (3.10.8-3) ... Setting up libpython3.11:riscv64 (3.11.0-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.10.6-1ubuntu1) ... Setting up fonts-urw-base35 (20200910-6) ... Setting up man-db (2.11.1-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3-pil:riscv64 (9.2.0-1.1ubuntu1) ... Setting up libopenblas-dev:riscv64 (0.3.21+ds-3) ... Setting up python3-decorator (4.4.2-0ubuntu1) ... Setting up python3-pyparsing (3.0.7-3) ... Setting up libpython3.11-dev:riscv64 (3.11.0-3) ... Setting up python3-reportlab-accel:riscv64 (3.6.11-1build1) ... Setting up libpython3.10-dev:riscv64 (3.10.8-3) ... Setting up python3-reportlab (3.6.11-1build1) ... Setting up python3.10-dev (3.10.8-3) ... Setting up python3-lib2to3 (3.10.8-1) ... Setting up python3-pkg-resources (65.5.0-1) ... Setting up python3-distutils (3.10.8-1) ... Setting up dh-python (5.20221202) ... Setting up libpython3-dev:riscv64 (3.10.6-1ubuntu1) ... Setting up python3-renderpm:riscv64 (3.6.11-1build1) ... Setting up python3-setuptools (65.5.0-1) ... Setting up python3.11-dev (3.11.0-3) ... Setting up python3-ply (3.11-5) ... Setting up python3-gast (0.5.2-2) ... Setting up python3-all (3.10.6-1ubuntu1) ... Setting up debhelper (13.10.1ubuntu1) ... Setting up python3-beniget (0.4.1-3) ... Setting up libpython3-all-dev:riscv64 (3.10.6-1ubuntu1) ... Setting up python3-dev (3.10.6-1ubuntu1) ... Setting up python3-numpy (1:1.21.5-1ubuntu1) ... Setting up python3-all-dev (3.10.6-1ubuntu1) ... Setting up python3-pythran (0.11.0+ds-7) ... Setting up python3-scipy (1.8.1-14) ... Processing triggers for libc-bin (2.36-0ubuntu4) ... Processing triggers for systemd (251.4-1ubuntu7) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.80+dfsg-2) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.13.0-1019-generic #21~20.04.1-Ubuntu SMP Thu Mar 24 22:36:01 UTC 2022 riscv64 (riscv64) Toolchain package versions: binutils_2.39-8ubuntu2 dpkg-dev_1.21.12ubuntu1 g++-12_12.2.0-9ubuntu1 gcc-12_12.2.0-9ubuntu1 libc6-dev_2.36-0ubuntu4 libstdc++-12-dev_12.2.0-9ubuntu1 libstdc++6_12.2.0-9ubuntu1 linux-libc-dev_5.19.0-23.24 Package versions: adduser_3.129ubuntu1 advancecomp_2.4-1 apt_2.5.4 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3ubuntu1 base-passwd_3.6.1 bash_5.2-1ubuntu2 binutils_2.39-8ubuntu2 binutils-common_2.39-8ubuntu2 binutils-riscv64-linux-gnu_2.39-8ubuntu2 bsdextrautils_2.38.1-4ubuntu1 bsdutils_1:2.38.1-4ubuntu1 build-essential_12.9ubuntu3 bzip2_1.0.8-5build1 ca-certificates_20211016ubuntu1 coreutils_8.32-4.1ubuntu1 cpp_4:12.2.0-1ubuntu1 cpp-12_12.2.0-9ubuntu1 dash_0.5.11+git20210903+057cd650a4ed-8ubuntu1 debconf_1.5.80 debhelper_13.10.1ubuntu1 debianutils_5.7-0.4 debugedit_1:5.0-5 dh-autoreconf_20 dh-python_5.20221202 dh-strip-nondeterminism_1.13.0-2 diffutils_1:3.8-1 dpkg_1.21.12ubuntu1 dpkg-dev_1.21.12ubuntu1 dwz_0.14+20220924-2 e2fsprogs_1.46.6~rc1-1ubuntu1 fakeroot_1.30.1-1ubuntu1 file_1:5.41-4 findutils_4.9.0-3ubuntu1 fonts-urw-base35_20200910-6 g++_4:12.2.0-1ubuntu1 g++-12_12.2.0-9ubuntu1 gcc_4:12.2.0-1ubuntu1 gcc-12_12.2.0-9ubuntu1 gcc-12-base_12.2.0-9ubuntu1 gettext_0.21-10 gettext-base_0.21-10 gpg_2.2.40-1ubuntu1 gpg-agent_2.2.40-1ubuntu1 gpgconf_2.2.40-1ubuntu1 gpgv_2.2.40-1ubuntu1 grep_3.8-3 groff-base_1.22.4-9 gzip_1.12-1ubuntu1 hostname_3.23ubuntu2 init_1.65.2 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-2 libapparmor1_3.0.7-1ubuntu4 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.3 libasan8_12.2.0-9ubuntu1 libassuan0_2.5.5-5 libatomic1_12.2.0-9ubuntu1 libattr1_1:2.5.1-3 libaudit-common_1:3.0.7-1ubuntu2 libaudit1_1:3.0.7-1ubuntu2 libbinutils_2.39-8ubuntu2 libblas3_3.11.0-2 libblkid1_2.38.1-4ubuntu1 libboost-dev_1.74.0.3ubuntu7 libboost1.74-dev_1.74.0-17ubuntu2 libbrotli1_1.0.9-2build7 libbsd0_0.11.7-1 libbz2-1.0_1.0.8-5build1 libc-bin_2.36-0ubuntu4 libc-dev-bin_2.36-0ubuntu4 libc6_2.36-0ubuntu4 libc6-dev_2.36-0ubuntu4 libcap-ng0_0.8.3-1build1 libcap2_1:2.44-1build3 libcc1-0_12.2.0-9ubuntu1 libcom-err2_1.46.6~rc1-1ubuntu1 libcrypt-dev_1:4.4.33-1 libcrypt1_1:4.4.33-1 libcryptsetup12_2:2.5.0-6ubuntu3 libctf-nobfd0_2.39-8ubuntu2 libctf0_2.39-8ubuntu2 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.264ubuntu1 libdebhelper-perl_13.10.1ubuntu1 libdeflate0_1.14-1 libdevmapper1.02.1_2:1.02.185-1ubuntu1 libdpkg-perl_1.21.12ubuntu1 libdw1_0.188-1 libelf1_0.188-1 libexpat1_2.5.0-1 libexpat1-dev_2.5.0-1 libext2fs2_1.46.6~rc1-1ubuntu1 libfakeroot_1.30.1-1ubuntu1 libfdisk1_2.38.1-4ubuntu1 libffi8_3.4.4-1 libfile-stripnondeterminism-perl_1.13.0-2 libfontenc1_1:1.1.4-1build3 libfreetype6_2.12.1+dfsg-3 libfribidi0_1.0.8-2.1ubuntu1 libgcc-12-dev_12.2.0-9ubuntu1 libgcc-s1_12.2.0-9ubuntu1 libgcrypt20_1.10.1-2ubuntu1 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgfortran5_12.2.0-9ubuntu1 libglib2.0-0_2.74.2-1 libgmp10_2:6.2.1+dfsg1-1.1ubuntu1 libgnutls30_3.7.7-2ubuntu2 libgomp1_12.2.0-9ubuntu1 libgpg-error0_1.46-1 libgraphite2-3_1.3.14-1build2 libgssapi-krb5-2_1.20.1-1 libharfbuzz0b_5.2.0-2 libhogweed6_3.8.1-2 libicu71_71.1-3ubuntu1 libidn2-0_2.3.3-1build1 libimagequant0_2.17.0-1 libip4tc2_1.8.7-1ubuntu7 libisl23_0.25-1 libjbig0_2.1-6ubuntu1 libjpeg-turbo8_2.1.2-0ubuntu1 libjpeg8_8c-2ubuntu10 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-sphinxdoc_5.3.0-2 libjs-underscore_1.13.4~dfsg+~1.11.4-2 libjson-c5_0.16-2 libk5crypto3_1.20.1-1 libkeyutils1_1.6.3-1 libkmod2_30+20220630-3ubuntu1 libkrb5-3_1.20.1-1 libkrb5support0_1.20.1-1 liblapack3_3.11.0-2 liblbfgsb0_3.0+dfsg.3-11 liblcms2-2_2.13.1-1 liblerc4_4.0.0+ds-2ubuntu2 liblockfile-bin_1.17-1build2 liblockfile1_1.17-1build2 liblz4-1_1.9.4-1 liblzma5_5.2.9-0.0 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmd0_1.0.4-2 libmount1_2.38.1-4ubuntu1 libmpc3_1.2.1-2build1 libmpdec3_2.5.1-2build2 libmpfr6_4.1.0-3build3 libncurses6_6.3+20220423-2 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnpth0_1.6-3build2 libnsl-dev_1.3.0-2build2 libnsl2_1.3.0-2build2 libopenblas-dev_0.3.21+ds-3 libopenblas-pthread-dev_0.3.21+ds-3 libopenblas0_0.3.21+ds-3 libopenblas0-pthread_0.3.21+ds-3 libopenjp2-7_2.5.0-1 libp11-kit0_0.24.1-1ubuntu2 libpam-modules_1.5.2-5ubuntu1 libpam-modules-bin_1.5.2-5ubuntu1 libpam-runtime_1.5.2-5ubuntu1 libpam0g_1.5.2-5ubuntu1 libpcre2-8-0_10.40-1ubuntu1 libpcre3_2:8.39-14 libperl5.34_5.34.0-5ubuntu1 libperl5.36_5.36.0-4ubuntu2 libpipeline1_1.5.7-1 libpng16-16_1.6.39-2 libprocps8_2:3.3.17-7ubuntu1 libpython3-all-dev_3.10.6-1ubuntu1 libpython3-dev_3.10.6-1ubuntu1 libpython3-stdlib_3.10.6-1ubuntu1 libpython3.10_3.10.8-3 libpython3.10-dev_3.10.8-3 libpython3.10-minimal_3.10.8-3 libpython3.10-stdlib_3.10.8-3 libpython3.11_3.11.0-3 libpython3.11-dev_3.11.0-3 libpython3.11-minimal_3.11.0-3 libpython3.11-stdlib_3.11.0-3 libraqm0_0.7.0-4ubuntu1 libreadline8_8.2-1.2 libseccomp2_2.5.4-1ubuntu2 libselinux1_3.4-1build1 libsemanage-common_3.4-1build1 libsemanage2_3.4-1build1 libsepol2_3.4-2 libsmartcols1_2.38.1-4ubuntu1 libsqlite3-0_3.40.0-1 libss2_1.46.6~rc1-1ubuntu1 libssl3_3.0.5-2ubuntu2 libstdc++-12-dev_12.2.0-9ubuntu1 libstdc++6_12.2.0-9ubuntu1 libsub-override-perl_0.09-4 libsystemd-shared_251.4-1ubuntu7 libsystemd0_251.4-1ubuntu7 libtasn1-6_4.19.0-2 libtiff5_4.4.0-6ubuntu1 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libuchardet0_0.0.7-1build2 libudev1_251.4-1ubuntu7 libunistring2_1.0-2 libuuid1_2.38.1-4ubuntu1 libwebp7_1.2.2-2build1 libwebpdemux2_1.2.2-2build1 libwebpmux3_1.2.2-2build1 libxau6_1:1.0.9-1build5 libxcb1_1.15-1 libxdmcp6_1:1.1.3-0ubuntu5 libxml2_2.9.14+dfsg-1.1 libxsimd-dev_8.1.0-7 libxxhash0_0.8.1-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_5.19.0-23.24 lockfile-progs_0.1.19build1 login_1:4.13+dfsg1-1ubuntu1 logsave_1.46.6~rc1-1ubuntu1 lto-disabled-list_36 m4_1.4.19-1 mailcap_3.70+nmu1ubuntu1 make_4.3-4.1build1 man-db_2.11.1-1 mawk_1.3.4.20200120-3.1 media-types_8.0.0 mime-support_3.66 mount_2.38.1-4ubuntu1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 openssl_3.0.5-2ubuntu2 optipng_0.7.7-2build1 passwd_1:4.13+dfsg1-1ubuntu1 patch_2.7.6-7build2 perl_5.36.0-4ubuntu2 perl-base_5.36.0-4ubuntu2 perl-modules-5.34_5.34.0-5ubuntu1 perl-modules-5.36_5.36.0-4ubuntu2 pinentry-curses_1.2.1-1ubuntu1 pkgbinarymangler_149 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3.1 procps_2:3.3.17-7ubuntu1 python3_3.10.6-1ubuntu1 python3-all_3.10.6-1ubuntu1 python3-all-dev_3.10.6-1ubuntu1 python3-beniget_0.4.1-3 python3-biopython_1.80+dfsg-2 python3-decorator_4.4.2-0ubuntu1 python3-dev_3.10.6-1ubuntu1 python3-distutils_3.10.8-1 python3-gast_0.5.2-2 python3-lib2to3_3.10.8-1 python3-minimal_3.10.6-1ubuntu1 python3-numpy_1:1.21.5-1ubuntu1 python3-pil_9.2.0-1.1ubuntu1 python3-pkg-resources_65.5.0-1 python3-ply_3.11-5 python3-pyparsing_3.0.7-3 python3-pythran_0.11.0+ds-7 python3-renderpm_3.6.11-1build1 python3-reportlab_3.6.11-1build1 python3-reportlab-accel_3.6.11-1build1 python3-scipy_1.8.1-14 python3-setuptools_65.5.0-1 python3.10_3.10.8-3 python3.10-dev_3.10.8-3 python3.10-minimal_3.10.8-3 python3.11_3.11.0-3 python3.11-dev_3.11.0-3 python3.11-minimal_3.11.0-3 readline-common_8.2-1.2 rpcsvc-proto_1.4.2-0ubuntu6 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1ubuntu2 sensible-utils_0.0.17 sgml-base_1.31 systemd_251.4-1ubuntu7 systemd-sysv_251.4-1ubuntu7 sysvinit-utils_3.05-7ubuntu1 tar_1.34+dfsg-1.1 tzdata_2022g-0ubuntu2 ubuntu-keyring_2021.03.26 usrmerge_33ubuntu1 util-linux_2.38.1-4ubuntu1 util-linux-extra_2.38.1-4ubuntu1 w3c-sgml-lib_1.3-3 x11-common_1:7.7+23ubuntu2 xfonts-encodings_1:1.0.5-0ubuntu2 xfonts-utils_1:7.7+6build2 xml-core_0.18+nmu1 xz-utils_5.2.9-0.0 zlib1g_1:1.2.13.dfsg-1ubuntu2 zlib1g-dev_1:1.2.13.dfsg-1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: prody Binary: python3-prody, python3-prody-tests Architecture: any all Version: 2.3.1+dfsg-2 Maintainer: Debichem Team Uploaders: Andrius Merkys , Homepage: https://github.com/prody/ProDy Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/debichem-team/prody Vcs-Git: https://salsa.debian.org/debichem-team/prody.git Testsuite: autopkgtest Testsuite-Triggers: python3-pytest Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-biopython , python3-numpy, python3-pyparsing , python3-scipy , python3-setuptools Package-List: python3-prody deb science optional arch=any python3-prody-tests deb science optional arch=all Checksums-Sha1: 2f1d4163d729897df87c0c9d0f29545e4487cba4 12920328 prody_2.3.1+dfsg.orig.tar.xz 88a84ad146bbf1221e6d4d0e05f5210d0dd58cca 5520 prody_2.3.1+dfsg-2.debian.tar.xz Checksums-Sha256: 3401d31865d0a2b82d32269301316397768ee9de0f0f71cd992b7b0a0298aaf2 12920328 prody_2.3.1+dfsg.orig.tar.xz bbb259fd472b812683ec7e0f43719f62b9a6adb353950eb4e28da1fbc5205cc9 5520 prody_2.3.1+dfsg-2.debian.tar.xz Files: 6307979cfe4a70c1215862cfde589413 12920328 prody_2.3.1+dfsg.orig.tar.xz d1df0236c584822db0643d6d9428610b 5520 prody_2.3.1+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmOO8j4SHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHJskP/iXx5AAbV//5GnhdImEtF50WTvOs8M0O AzwkOmr3pllmkYSN5iu68nectFEiUWOyVYwiGAydDJfnwh4Z4PBNuZNEGlDMXtJu EvyCxM/xztkaSttdELnKKS5m1KwEn44gumFYb3w5tSBvvulJdl2vx0bEMwvg01LS sBmG0SZP2rtrEVAQxDZnG0YxiByZEqaEXv4KjikEdmemNdvDQj8zOfqF6rr4fssW T29xav74HXhTz7S6JbuhNcDCS4ws52Wy4ZenmJq+uiGkCaEz9bQNYBwcrP4pky9Z 6QJG5UOkbjZHGZggCsCryuG2bw08p0B85Tc0CnN+XRfg5gjccH/JMkidw4bvlFzn Jruy5x3nC7PUbPoCtT31oZpvXXY7T2zX44BoHdToVacdi0HUdPMpT8053uxvOAt7 65XlE9qsJrP5hZaC6paY7JTQGv0FEdXKDynnwfOsigqKqq1iNmFxpD930BMQh6rI E5uN1ZrfaF1slyqb6JpP/Zdo/WTDQ+qII9djGgT46weI6iyBYClWLU04niyB4HCq Dr34xk26t1PJ2mAlv5fuQsyRaa8hi/TFat8gV64Brbu7nnrYf/79yBwRuX2U6Ik+ KvhS+2Ia/Xx1vxplfFbZqqLYIG7UuleHMFZI03FIEynmaXU2AsAmABLQSxcEeelk 3IqXVqaKyl+W =7I6D -----END PGP SIGNATURE----- gpgv: Signature made Tue Dec 6 07:41:50 2022 UTC gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./prody_2.3.1+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting prody in /<> dpkg-source: info: unpacking prody_2.3.1+dfsg.orig.tar.xz dpkg-source: info: unpacking prody_2.3.1+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no-network-access.patch dpkg-source: info: applying add-missing-test-files.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-24905025 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-24905025 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-24905025 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package prody dpkg-buildpackage: info: source version 2.3.1+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 debian/rules clean dh clean --buildsystem pybuild --with numpy3,python3 debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean I: pybuild base:240: python3.11 setup.py clean running clean removing '/<>/.pybuild/cpython3_3.11_prody/build' (and everything under it) 'build/bdist.linux-riscv64' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it I: pybuild base:240: python3.10 setup.py clean running clean removing '/<>/.pybuild/cpython3_3.10_prody/build' (and everything under it) 'build/bdist.linux-riscv64' does not exist -- can't clean it 'build/scripts-3.10' does not exist -- can't clean it rm -rf ProDy.egg-info make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --buildsystem pybuild --with numpy3,python3 dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:240: python3.11 setup.py config running config I: pybuild base:240: python3.10 setup.py config running config dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3.11 setup.py build running build running build_py creating /<>/.pybuild/cpython3_3.11_prody/build/prody copying prody/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody creating /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/atomic.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/functions.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/donor.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/chain.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/improper.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/hierview.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/atom.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/flags.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/crossterm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/atomgroup.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/subset.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/atommap.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/acceptor.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/selection.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/angle.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/bond.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/pointer.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/dihedral.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/residue.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/select.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/nbexclusion.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/segment.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic copying prody/atomic/fields.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic creating /<>/.pybuild/cpython3_3.11_prody/build/prody/database copying prody/database/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/database copying prody/database/uniprot.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/database copying prody/database/cath.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/database copying prody/database/goa.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/database copying prody/database/quartataweb.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/database copying prody/database/dali.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/database copying prody/database/pfam.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/database creating /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/gamma.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/imanm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/nmdfile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/anm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/functions.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/exgnm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/adaptive.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/plotting.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/signature.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/gnm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/bbenm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/clustenm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/rtb.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/heatmapper.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/pca.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/modeset.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/sampling.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/essa.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/perturb.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/compare.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/exanm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/vmdfile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/nma.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/entropy.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/mechstiff.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/editing.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/mode.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics copying prody/dynamics/analysis.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics creating /<>/.pybuild/cpython3_3.11_prody/build/prody/ensemble copying prody/ensemble/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/ensemble copying prody/ensemble/functions.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/ensemble copying prody/ensemble/conformation.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/ensemble copying prody/ensemble/ensemble.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/ensemble copying prody/ensemble/pdbensemble.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/ensemble creating /<>/.pybuild/cpython3_3.11_prody/build/prody/kdtree copying prody/kdtree/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/kdtree copying prody/kdtree/kdtree.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/kdtree creating /<>/.pybuild/cpython3_3.11_prody/build/prody/measure copying prody/measure/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/measure copying prody/measure/contacts.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/measure copying prody/measure/measure.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/measure copying prody/measure/transform.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/measure creating /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/functions.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/wwpdb.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/ciffile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/header.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/cifheader.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/pdbclusters.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/emdfile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/compare.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/pdbfile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/blastpdb.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/starfile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/dssp.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/localpdb.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins copying prody/proteins/stride.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins creating /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence copying prody/sequence/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence copying prody/sequence/plotting.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence copying prody/sequence/sequence.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence copying prody/sequence/msafile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence copying prody/sequence/msa.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence copying prody/sequence/analysis.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence creating /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory copying prody/trajectory/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory copying prody/trajectory/trajbase.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory copying prody/trajectory/frame.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory copying prody/trajectory/dcdfile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory copying prody/trajectory/trajectory.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory copying prody/trajectory/trajfile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory copying prody/trajectory/psffile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory creating /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin copying prody/chromatin/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin copying prody/chromatin/cluster.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin copying prody/chromatin/functions.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin copying prody/chromatin/straw.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin copying prody/chromatin/norm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin copying prody/chromatin/hic.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin creating /<>/.pybuild/cpython3_3.11_prody/build/prody/compounds copying prody/compounds/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/compounds copying prody/compounds/functions.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/compounds copying prody/compounds/bird.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/compounds copying prody/compounds/pdbligands.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/compounds copying prody/compounds/ccd.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/compounds creating /<>/.pybuild/cpython3_3.11_prody/build/prody/domain_decomposition copying prody/domain_decomposition/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/domain_decomposition copying prody/domain_decomposition/spectrus.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/domain_decomposition creating /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/settings.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/drawtools.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/seqtools.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/doctools.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/checkers.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/legacy.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/TreeConstruction.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/catchall.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/laptools.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/pathtools.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/eigtools.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/logger.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities copying prody/utilities/misctools.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities creating /<>/.pybuild/cpython3_3.11_prody/build/prody/apps copying prody/apps/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps copying prody/apps/apptools.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps creating /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_catdcd.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_pca.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_select.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_anm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_gnm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_energy.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_align.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_fetch.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_eda.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_contacts.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_blast.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/nmaoptions.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_biomol.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps creating /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_refine.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_search.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_filter.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_fetch.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_merge.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_rankorder.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_occupancy.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_conserv.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_coevol.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests copying prody/tests/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps copying prody/tests/apps/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps copying prody/tests/apps/test_prody_gnm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps copying prody/tests/apps/test_prody_pca.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps copying prody/tests/apps/test_prody_anm.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps copying prody/tests/apps/test_prody_examples.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps copying prody/tests/apps/test_prody_catdcd.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic copying prody/tests/atomic/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic copying prody/tests/atomic/test_atomic.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic copying prody/tests/atomic/test_atommap.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic copying prody/tests/atomic/test_fragment.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic copying prody/tests/atomic/test_hierview.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic copying prody/tests/atomic/test_subset.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic copying prody/tests/atomic/test_select.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/dynamics copying prody/tests/dynamics/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/dynamics copying prody/tests/dynamics/test_editing.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/dynamics copying prody/tests/dynamics/test_pca.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/dynamics copying prody/tests/dynamics/test_enms.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/dynamics copying prody/tests/dynamics/test_signature.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/dynamics creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/ensemble copying prody/tests/ensemble/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/ensemble copying prody/tests/ensemble/test_functions.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/ensemble copying prody/tests/ensemble/test_conformation.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/ensemble copying prody/tests/ensemble/test_ensemble.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/ensemble copying prody/tests/ensemble/test_pdbensemble.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/ensemble creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/kdtree copying prody/tests/kdtree/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/kdtree copying prody/tests/kdtree/test_kdtree.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/kdtree creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/measure copying prody/tests/measure/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/measure copying prody/tests/measure/test_measure.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/measure copying prody/tests/measure/test_transform.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/measure copying prody/tests/measure/test_contacts.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/measure creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins copying prody/tests/proteins/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins copying prody/tests/proteins/test_pdbfile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins copying prody/tests/proteins/test_dssp.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins copying prody/tests/proteins/test_ciffile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins copying prody/tests/proteins/test_localpdb.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins copying prody/tests/proteins/test_header.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins copying prody/tests/proteins/test_wwpdb.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/sequence copying prody/tests/sequence/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/sequence copying prody/tests/sequence/test_msa.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/sequence copying prody/tests/sequence/test_analysis.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/sequence copying prody/tests/sequence/test_sequence.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/sequence copying prody/tests/sequence/test_msafile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/sequence creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/trajectory copying prody/tests/trajectory/test_frame.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/trajectory copying prody/tests/trajectory/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/trajectory copying prody/tests/trajectory/test_dcdfile.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/trajectory creating /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/utilities copying prody/tests/utilities/__init__.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/utilities copying prody/tests/utilities/test_misctools.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/utilities copying prody/tests/utilities/test_checkers.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/utilities copying prody/tests/utilities/test_pathtools.py -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/utilities creating /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/datafiles copying prody/utilities/datafiles/saxs_water.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/datafiles copying prody/utilities/datafiles/mod_res_map.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/datafiles copying prody/tests/datafiles/pdb3o21.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb2gb1_truncated.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb3mht.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdbRTER.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb2nwl-opm.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb3p3w.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg_oneatom.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb3hsy.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1r19_dssp.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_ca.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_truncated.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi_ca.pdb -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_evalues.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_vectors.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_evalues.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_evalues.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/hit1ubi.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_evalues.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_vectors.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_sca.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_vectors.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_di.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_vectors.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/commute1ubi.dat -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6zu5.cif -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6yfy.cif -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_cov.coo -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_project.coo -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_hessian.coo -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_hessian.coo -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_hessian.coo -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/dcd2k39_truncated.dcd -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/xmlSTI.xml -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.sth -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.slx -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.fasta -> /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles running build_ext building 'prody.dynamics.rtbtools' extension creating build creating build/temp.linux-riscv64-cpython-311 creating build/temp.linux-riscv64-cpython-311/prody creating build/temp.linux-riscv64-cpython-311/prody/dynamics riscv64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c prody/dynamics/rtbtools.c -o build/temp.linux-riscv64-cpython-311/prody/dynamics/rtbtools.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-311/prody/dynamics/rtbtools.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/rtbtools.cpython-311-riscv64-linux-gnu.so building 'prody.dynamics.smtools' extension riscv64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c prody/dynamics/smtools.c -o build/temp.linux-riscv64-cpython-311/prody/dynamics/smtools.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-311/prody/dynamics/smtools.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/smtools.cpython-311-riscv64-linux-gnu.so building 'prody.sequence.msatools' extension creating build/temp.linux-riscv64-cpython-311/prody/sequence riscv64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c prody/sequence/msatools.c -o build/temp.linux-riscv64-cpython-311/prody/sequence/msatools.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-311/prody/sequence/msatools.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/msatools.cpython-311-riscv64-linux-gnu.so building 'prody.sequence.msaio' extension riscv64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c prody/sequence/msaio.c -o build/temp.linux-riscv64-cpython-311/prody/sequence/msaio.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-311/prody/sequence/msaio.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/msaio.cpython-311-riscv64-linux-gnu.so building 'prody.sequence.seqtools' extension riscv64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c prody/sequence/seqtools.c -o build/temp.linux-riscv64-cpython-311/prody/sequence/seqtools.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-311/prody/sequence/seqtools.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/seqtools.cpython-311-riscv64-linux-gnu.so building 'prody.kdtree._CKDTree' extension creating build/temp.linux-riscv64-cpython-311/prody/kdtree riscv64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c prody/kdtree/KDTree.c -o build/temp.linux-riscv64-cpython-311/prody/kdtree/KDTree.o riscv64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c prody/kdtree/KDTreemodule.c -o build/temp.linux-riscv64-cpython-311/prody/kdtree/KDTreemodule.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-311/prody/kdtree/KDTree.o build/temp.linux-riscv64-cpython-311/prody/kdtree/KDTreemodule.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.11_prody/build/prody/kdtree/_CKDTree.cpython-311-riscv64-linux-gnu.so building 'prody.proteins.ccealign' extension creating build/temp.linux-riscv64-cpython-311/prody/proteins creating build/temp.linux-riscv64-cpython-311/prody/proteins/ccealign riscv64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iprody/utilities/tnt -I/usr/include/python3.11 -c prody/proteins/ccealign/ccealignmodule.cpp -o build/temp.linux-riscv64-cpython-311/prody/proteins/ccealign/ccealignmodule.o riscv64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-311/prody/proteins/ccealign/ccealignmodule.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/ccealign.cpython-311-riscv64-linux-gnu.so I: pybuild base:240: /usr/bin/python3 setup.py build running build running build_py creating /<>/.pybuild/cpython3_3.10_prody/build/prody copying prody/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody creating /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/atomic.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/functions.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/donor.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/chain.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/improper.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/hierview.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/atom.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/flags.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/crossterm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/atomgroup.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/subset.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/atommap.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/acceptor.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/selection.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/angle.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/bond.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/pointer.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/dihedral.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/residue.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/select.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/nbexclusion.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/segment.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic copying prody/atomic/fields.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic creating /<>/.pybuild/cpython3_3.10_prody/build/prody/database copying prody/database/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/database copying prody/database/uniprot.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/database copying prody/database/cath.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/database copying prody/database/goa.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/database copying prody/database/quartataweb.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/database copying prody/database/dali.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/database copying prody/database/pfam.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/database creating /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/gamma.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/imanm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/nmdfile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/anm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/functions.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/exgnm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/adaptive.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/plotting.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/signature.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/gnm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/bbenm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/clustenm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/rtb.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/heatmapper.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/pca.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/modeset.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/sampling.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/essa.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/perturb.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/compare.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/exanm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/vmdfile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/nma.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/entropy.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/mechstiff.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/editing.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/mode.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics copying prody/dynamics/analysis.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics creating /<>/.pybuild/cpython3_3.10_prody/build/prody/ensemble copying prody/ensemble/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/ensemble copying prody/ensemble/functions.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/ensemble copying prody/ensemble/conformation.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/ensemble copying prody/ensemble/ensemble.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/ensemble copying prody/ensemble/pdbensemble.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/ensemble creating /<>/.pybuild/cpython3_3.10_prody/build/prody/kdtree copying prody/kdtree/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/kdtree copying prody/kdtree/kdtree.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/kdtree creating /<>/.pybuild/cpython3_3.10_prody/build/prody/measure copying prody/measure/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/measure copying prody/measure/contacts.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/measure copying prody/measure/measure.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/measure copying prody/measure/transform.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/measure creating /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/functions.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/wwpdb.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/ciffile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/header.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/cifheader.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/pdbclusters.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/emdfile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/compare.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/pdbfile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/blastpdb.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/starfile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/dssp.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/localpdb.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins copying prody/proteins/stride.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins creating /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence copying prody/sequence/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence copying prody/sequence/plotting.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence copying prody/sequence/sequence.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence copying prody/sequence/msafile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence copying prody/sequence/msa.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence copying prody/sequence/analysis.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence creating /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory copying prody/trajectory/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory copying prody/trajectory/trajbase.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory copying prody/trajectory/frame.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory copying prody/trajectory/dcdfile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory copying prody/trajectory/trajectory.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory copying prody/trajectory/trajfile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory copying prody/trajectory/psffile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory creating /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin copying prody/chromatin/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin copying prody/chromatin/cluster.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin copying prody/chromatin/functions.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin copying prody/chromatin/straw.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin copying prody/chromatin/norm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin copying prody/chromatin/hic.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin creating /<>/.pybuild/cpython3_3.10_prody/build/prody/compounds copying prody/compounds/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/compounds copying prody/compounds/functions.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/compounds copying prody/compounds/bird.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/compounds copying prody/compounds/pdbligands.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/compounds copying prody/compounds/ccd.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/compounds creating /<>/.pybuild/cpython3_3.10_prody/build/prody/domain_decomposition copying prody/domain_decomposition/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/domain_decomposition copying prody/domain_decomposition/spectrus.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/domain_decomposition creating /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/settings.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/drawtools.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/seqtools.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/doctools.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/checkers.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/legacy.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/TreeConstruction.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/catchall.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/laptools.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/pathtools.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/eigtools.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/logger.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities copying prody/utilities/misctools.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities creating /<>/.pybuild/cpython3_3.10_prody/build/prody/apps copying prody/apps/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps copying prody/apps/apptools.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps creating /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_catdcd.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_pca.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_select.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_anm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_gnm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_energy.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_align.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_fetch.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_eda.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_contacts.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_blast.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/nmaoptions.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps copying prody/apps/prody_apps/prody_biomol.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps creating /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_refine.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_search.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_filter.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_fetch.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_merge.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_rankorder.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_occupancy.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_conserv.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps copying prody/apps/evol_apps/evol_coevol.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests copying prody/tests/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps copying prody/tests/apps/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps copying prody/tests/apps/test_prody_gnm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps copying prody/tests/apps/test_prody_pca.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps copying prody/tests/apps/test_prody_anm.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps copying prody/tests/apps/test_prody_examples.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps copying prody/tests/apps/test_prody_catdcd.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic copying prody/tests/atomic/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic copying prody/tests/atomic/test_atomic.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic copying prody/tests/atomic/test_atommap.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic copying prody/tests/atomic/test_fragment.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic copying prody/tests/atomic/test_hierview.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic copying prody/tests/atomic/test_subset.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic copying prody/tests/atomic/test_select.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/dynamics copying prody/tests/dynamics/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/dynamics copying prody/tests/dynamics/test_editing.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/dynamics copying prody/tests/dynamics/test_pca.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/dynamics copying prody/tests/dynamics/test_enms.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/dynamics copying prody/tests/dynamics/test_signature.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/dynamics creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/ensemble copying prody/tests/ensemble/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/ensemble copying prody/tests/ensemble/test_functions.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/ensemble copying prody/tests/ensemble/test_conformation.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/ensemble copying prody/tests/ensemble/test_ensemble.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/ensemble copying prody/tests/ensemble/test_pdbensemble.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/ensemble creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/kdtree copying prody/tests/kdtree/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/kdtree copying prody/tests/kdtree/test_kdtree.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/kdtree creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/measure copying prody/tests/measure/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/measure copying prody/tests/measure/test_measure.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/measure copying prody/tests/measure/test_transform.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/measure copying prody/tests/measure/test_contacts.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/measure creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins copying prody/tests/proteins/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins copying prody/tests/proteins/test_pdbfile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins copying prody/tests/proteins/test_dssp.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins copying prody/tests/proteins/test_ciffile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins copying prody/tests/proteins/test_localpdb.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins copying prody/tests/proteins/test_header.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins copying prody/tests/proteins/test_wwpdb.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/sequence copying prody/tests/sequence/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/sequence copying prody/tests/sequence/test_msa.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/sequence copying prody/tests/sequence/test_analysis.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/sequence copying prody/tests/sequence/test_sequence.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/sequence copying prody/tests/sequence/test_msafile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/sequence creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/trajectory copying prody/tests/trajectory/test_frame.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/trajectory copying prody/tests/trajectory/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/trajectory copying prody/tests/trajectory/test_dcdfile.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/trajectory creating /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/utilities copying prody/tests/utilities/__init__.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/utilities copying prody/tests/utilities/test_misctools.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/utilities copying prody/tests/utilities/test_checkers.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/utilities copying prody/tests/utilities/test_pathtools.py -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/utilities creating /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/datafiles copying prody/utilities/datafiles/saxs_water.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/datafiles copying prody/utilities/datafiles/mod_res_map.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/datafiles copying prody/tests/datafiles/pdb3o21.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb2gb1_truncated.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb3mht.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdbRTER.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb2nwl-opm.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb3p3w.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg_oneatom.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb3hsy.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1r19_dssp.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_ca.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_truncated.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi_ca.pdb -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_evalues.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_vectors.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_evalues.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_evalues.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/hit1ubi.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_evalues.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_vectors.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_sca.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_vectors.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_di.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_vectors.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/commute1ubi.dat -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6zu5.cif -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6yfy.cif -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_cov.coo -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_project.coo -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_hessian.coo -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_hessian.coo -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_hessian.coo -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/dcd2k39_truncated.dcd -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/xmlSTI.xml -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.sth -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.slx -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.fasta -> /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles running build_ext building 'prody.dynamics.rtbtools' extension creating build/temp.linux-riscv64-cpython-310 creating build/temp.linux-riscv64-cpython-310/prody creating build/temp.linux-riscv64-cpython-310/prody/dynamics riscv64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c prody/dynamics/rtbtools.c -o build/temp.linux-riscv64-cpython-310/prody/dynamics/rtbtools.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-310/prody/dynamics/rtbtools.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/rtbtools.cpython-310-riscv64-linux-gnu.so building 'prody.dynamics.smtools' extension riscv64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c prody/dynamics/smtools.c -o build/temp.linux-riscv64-cpython-310/prody/dynamics/smtools.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-310/prody/dynamics/smtools.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/smtools.cpython-310-riscv64-linux-gnu.so building 'prody.sequence.msatools' extension creating build/temp.linux-riscv64-cpython-310/prody/sequence riscv64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c prody/sequence/msatools.c -o build/temp.linux-riscv64-cpython-310/prody/sequence/msatools.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-310/prody/sequence/msatools.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/msatools.cpython-310-riscv64-linux-gnu.so building 'prody.sequence.msaio' extension riscv64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c prody/sequence/msaio.c -o build/temp.linux-riscv64-cpython-310/prody/sequence/msaio.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-310/prody/sequence/msaio.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/msaio.cpython-310-riscv64-linux-gnu.so building 'prody.sequence.seqtools' extension riscv64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c prody/sequence/seqtools.c -o build/temp.linux-riscv64-cpython-310/prody/sequence/seqtools.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-310/prody/sequence/seqtools.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/seqtools.cpython-310-riscv64-linux-gnu.so building 'prody.kdtree._CKDTree' extension creating build/temp.linux-riscv64-cpython-310/prody/kdtree riscv64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c prody/kdtree/KDTree.c -o build/temp.linux-riscv64-cpython-310/prody/kdtree/KDTree.o riscv64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c prody/kdtree/KDTreemodule.c -o build/temp.linux-riscv64-cpython-310/prody/kdtree/KDTreemodule.o riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-310/prody/kdtree/KDTree.o build/temp.linux-riscv64-cpython-310/prody/kdtree/KDTreemodule.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.10_prody/build/prody/kdtree/_CKDTree.cpython-310-riscv64-linux-gnu.so building 'prody.proteins.ccealign' extension creating build/temp.linux-riscv64-cpython-310/prody/proteins creating build/temp.linux-riscv64-cpython-310/prody/proteins/ccealign riscv64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iprody/utilities/tnt -I/usr/include/python3.10 -c prody/proteins/ccealign/ccealignmodule.cpp -o build/temp.linux-riscv64-cpython-310/prody/proteins/ccealign/ccealignmodule.o riscv64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-310/prody/proteins/ccealign/ccealignmodule.o -L/usr/lib/riscv64-linux-gnu -o /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/ccealign.cpython-310-riscv64-linux-gnu.so dh: command-omitted: The call to "dh_auto_test -a -O--buildsystem=pybuild" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install -a -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3.11 setup.py install --root /<>/debian/python3-prody running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running build_ext running install_lib creating /<>/debian/python3-prody creating /<>/debian/python3-prody/usr creating /<>/debian/python3-prody/usr/lib creating /<>/debian/python3-prody/usr/lib/python3.11 creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody copying /<>/.pybuild/cpython3_3.11_prody/build/prody/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin/cluster.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin/functions.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin/straw.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin/norm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.11_prody/build/prody/chromatin/hic.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/ensemble copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/ensemble/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/ensemble copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/ensemble/test_functions.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/ensemble copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/ensemble/test_conformation.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/ensemble copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/ensemble/test_ensemble.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/ensemble copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/ensemble/test_pdbensemble.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/ensemble creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/measure copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/measure/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/measure copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/measure/test_measure.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/measure copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/measure/test_transform.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/measure copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/measure/test_contacts.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/measure creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/anm1ubi_evalues.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/gnm1ubi_vectors.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb3o21.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb2gb1_truncated.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/exanm2nwl_evalues.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb3mht.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdbRTER.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/msa_Cys_knot.sth -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pca2k39_evalues.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/mmcif_6zu5.cif -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/hit1ubi.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/msa_Cys_knot.slx -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pca2k39_cov.coo -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/rtb2gb1_project.coo -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb2nwl-opm.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb3p3w.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/rtb2gb1_hessian.coo -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/gnm1ubi_evalues.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/anm1ubi_hessian.coo -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb1ejg_oneatom.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb3hsy.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb1ejg.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb1r19_dssp.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb1ubi.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb2k39_ca.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/xmlSTI.xml -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/anm1ubi_vectors.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/msa_Cys_knot.fasta -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb2k39_truncated.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/exanm2nwl_hessian.coo -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/dcd2k39_truncated.dcd -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/msa_Cys_knot_sca.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/exanm2nwl_vectors.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/msa_Cys_knot_di.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pca2k39_vectors.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/commute1ubi.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/pdb1ubi_ca.pdb -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/datafiles/mmcif_6yfy.cif -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/sequence/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/sequence/test_msa.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/sequence/test_analysis.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/sequence/test_sequence.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/sequence/test_msafile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/sequence creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/kdtree copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/kdtree/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/kdtree copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/kdtree/test_kdtree.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/kdtree creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic/test_atomic.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic/test_atommap.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic/test_fragment.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic/test_hierview.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic/test_subset.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/atomic/test_select.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins/test_pdbfile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins/test_dssp.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins/test_ciffile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins/test_localpdb.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins/test_header.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/proteins/test_wwpdb.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/trajectory copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/trajectory/test_frame.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/trajectory copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/trajectory/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/trajectory copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/trajectory/test_dcdfile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/trajectory creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/utilities/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/utilities/test_misctools.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/utilities/test_checkers.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/utilities/test_pathtools.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/utilities creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/dynamics/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/dynamics/test_editing.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/dynamics/test_pca.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/dynamics/test_enms.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/dynamics/test_signature.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/dynamics creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps/test_prody_gnm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps/test_prody_pca.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps/test_prody_anm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps/test_prody_examples.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/tests/apps/test_prody_catdcd.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/ensemble copying /<>/.pybuild/cpython3_3.11_prody/build/prody/ensemble/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/ensemble copying /<>/.pybuild/cpython3_3.11_prody/build/prody/ensemble/functions.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/ensemble copying /<>/.pybuild/cpython3_3.11_prody/build/prody/ensemble/conformation.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/ensemble copying /<>/.pybuild/cpython3_3.11_prody/build/prody/ensemble/ensemble.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/ensemble copying /<>/.pybuild/cpython3_3.11_prody/build/prody/ensemble/pdbensemble.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/ensemble creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/measure copying /<>/.pybuild/cpython3_3.11_prody/build/prody/measure/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/measure copying /<>/.pybuild/cpython3_3.11_prody/build/prody/measure/contacts.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/measure copying /<>/.pybuild/cpython3_3.11_prody/build/prody/measure/measure.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/measure copying /<>/.pybuild/cpython3_3.11_prody/build/prody/measure/transform.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/measure creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/plotting.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/msaio.cpython-311-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/sequence.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/msatools.cpython-311-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/msafile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/seqtools.cpython-311-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/msa.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.11_prody/build/prody/sequence/analysis.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/kdtree copying /<>/.pybuild/cpython3_3.11_prody/build/prody/kdtree/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/kdtree copying /<>/.pybuild/cpython3_3.11_prody/build/prody/kdtree/kdtree.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/kdtree copying /<>/.pybuild/cpython3_3.11_prody/build/prody/kdtree/_CKDTree.cpython-311-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/kdtree creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/atomic.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/functions.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/donor.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/chain.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/improper.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/hierview.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/atom.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/flags.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/crossterm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/atomgroup.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/subset.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/atommap.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/acceptor.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/selection.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/angle.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/bond.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/pointer.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/dihedral.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/residue.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/select.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/nbexclusion.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/segment.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.11_prody/build/prody/atomic/fields.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/functions.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/wwpdb.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/ciffile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/header.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/ccealign.cpython-311-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/cifheader.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/pdbclusters.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/emdfile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/compare.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/pdbfile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/blastpdb.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/starfile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/dssp.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/localpdb.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.11_prody/build/prody/proteins/stride.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory/trajbase.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory/frame.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory/dcdfile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory/trajectory.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory/trajfile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.11_prody/build/prody/trajectory/psffile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/compounds copying /<>/.pybuild/cpython3_3.11_prody/build/prody/compounds/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/compounds copying /<>/.pybuild/cpython3_3.11_prody/build/prody/compounds/functions.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/compounds copying /<>/.pybuild/cpython3_3.11_prody/build/prody/compounds/bird.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/compounds copying /<>/.pybuild/cpython3_3.11_prody/build/prody/compounds/pdbligands.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/compounds copying /<>/.pybuild/cpython3_3.11_prody/build/prody/compounds/ccd.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/compounds creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.11_prody/build/prody/database/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.11_prody/build/prody/database/uniprot.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.11_prody/build/prody/database/cath.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.11_prody/build/prody/database/goa.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.11_prody/build/prody/database/quartataweb.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.11_prody/build/prody/database/dali.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.11_prody/build/prody/database/pfam.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/settings.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/drawtools.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/seqtools.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/doctools.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/checkers.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/legacy.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/TreeConstruction.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/catchall.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/datafiles/saxs_water.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/datafiles/mod_res_map.dat -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/datafiles copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/laptools.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/pathtools.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/eigtools.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/logger.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.11_prody/build/prody/utilities/misctools.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/domain_decomposition copying /<>/.pybuild/cpython3_3.11_prody/build/prody/domain_decomposition/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/domain_decomposition copying /<>/.pybuild/cpython3_3.11_prody/build/prody/domain_decomposition/spectrus.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/domain_decomposition creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/gamma.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/imanm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/nmdfile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/anm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/functions.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/exgnm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/adaptive.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/plotting.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/signature.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/gnm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/bbenm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/clustenm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/rtb.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/heatmapper.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/smtools.cpython-311-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/pca.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/modeset.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/rtbtools.cpython-311-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/sampling.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/essa.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/perturb.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/compare.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/exanm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/vmdfile.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/nma.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/entropy.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/mechstiff.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/editing.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/mode.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.11_prody/build/prody/dynamics/analysis.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/apptools.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_catdcd.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_pca.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_select.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_anm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_gnm.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_energy.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_align.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_fetch.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_eda.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_contacts.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_blast.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/nmaoptions.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/prody_apps/prody_biomol.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps creating /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps/evol_refine.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps/evol_search.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps/evol_filter.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps/evol_fetch.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps/evol_merge.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps/evol_rankorder.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps/evol_occupancy.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps/evol_conserv.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.11_prody/build/prody/apps/evol_apps/evol_coevol.py -> /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin/cluster.py to cluster.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin/functions.py to functions.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin/straw.py to straw.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin/norm.py to norm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/chromatin/hic.py to hic.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/ensemble/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/ensemble/test_functions.py to test_functions.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/ensemble/test_conformation.py to test_conformation.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/ensemble/test_ensemble.py to test_ensemble.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/ensemble/test_pdbensemble.py to test_pdbensemble.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/measure/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/measure/test_measure.py to test_measure.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/measure/test_transform.py to test_transform.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/measure/test_contacts.py to test_contacts.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/datafiles/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/sequence/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/sequence/test_msa.py to test_msa.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/sequence/test_analysis.py to test_analysis.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/sequence/test_sequence.py to test_sequence.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/sequence/test_msafile.py to test_msafile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/kdtree/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/kdtree/test_kdtree.py to test_kdtree.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic/test_atomic.py to test_atomic.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic/test_atommap.py to test_atommap.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic/test_fragment.py to test_fragment.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic/test_hierview.py to test_hierview.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic/test_subset.py to test_subset.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/atomic/test_select.py to test_select.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins/test_pdbfile.py to test_pdbfile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins/test_dssp.py to test_dssp.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins/test_ciffile.py to test_ciffile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins/test_localpdb.py to test_localpdb.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins/test_header.py to test_header.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/proteins/test_wwpdb.py to test_wwpdb.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/trajectory/test_frame.py to test_frame.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/trajectory/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/trajectory/test_dcdfile.py to test_dcdfile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/utilities/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/utilities/test_misctools.py to test_misctools.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/utilities/test_checkers.py to test_checkers.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/utilities/test_pathtools.py to test_pathtools.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/dynamics/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/dynamics/test_editing.py to test_editing.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/dynamics/test_pca.py to test_pca.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/dynamics/test_enms.py to test_enms.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/dynamics/test_signature.py to test_signature.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps/test_prody_gnm.py to test_prody_gnm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps/test_prody_pca.py to test_prody_pca.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps/test_prody_anm.py to test_prody_anm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps/test_prody_examples.py to test_prody_examples.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/tests/apps/test_prody_catdcd.py to test_prody_catdcd.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/ensemble/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/ensemble/functions.py to functions.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/ensemble/conformation.py to conformation.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/ensemble/ensemble.py to ensemble.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/ensemble/pdbensemble.py to pdbensemble.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/measure/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/measure/contacts.py to contacts.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/measure/measure.py to measure.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/measure/transform.py to transform.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence/plotting.py to plotting.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence/sequence.py to sequence.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence/msafile.py to msafile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence/msa.py to msa.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/sequence/analysis.py to analysis.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/kdtree/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/kdtree/kdtree.py to kdtree.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/atomic.py to atomic.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/functions.py to functions.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/donor.py to donor.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/chain.py to chain.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/improper.py to improper.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/hierview.py to hierview.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/atom.py to atom.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/flags.py to flags.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/crossterm.py to crossterm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/atomgroup.py to atomgroup.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/subset.py to subset.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/atommap.py to atommap.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/acceptor.py to acceptor.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/selection.py to selection.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/angle.py to angle.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/bond.py to bond.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/pointer.py to pointer.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/dihedral.py to dihedral.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/residue.py to residue.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/select.py to select.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/nbexclusion.py to nbexclusion.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/segment.py to segment.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/atomic/fields.py to fields.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/functions.py to functions.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/wwpdb.py to wwpdb.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/ciffile.py to ciffile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/header.py to header.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/cifheader.py to cifheader.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/pdbclusters.py to pdbclusters.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/emdfile.py to emdfile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/compare.py to compare.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/pdbfile.py to pdbfile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/blastpdb.py to blastpdb.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/starfile.py to starfile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/dssp.py to dssp.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/localpdb.py to localpdb.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/proteins/stride.py to stride.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory/trajbase.py to trajbase.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory/frame.py to frame.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory/dcdfile.py to dcdfile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory/trajectory.py to trajectory.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory/trajfile.py to trajfile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/trajectory/psffile.py to psffile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/compounds/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/compounds/functions.py to functions.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/compounds/bird.py to bird.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/compounds/pdbligands.py to pdbligands.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/compounds/ccd.py to ccd.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database/uniprot.py to uniprot.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database/cath.py to cath.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database/goa.py to goa.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database/quartataweb.py to quartataweb.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database/dali.py to dali.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/database/pfam.py to pfam.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/settings.py to settings.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/drawtools.py to drawtools.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/seqtools.py to seqtools.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/doctools.py to doctools.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/checkers.py to checkers.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/legacy.py to legacy.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/TreeConstruction.py to TreeConstruction.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/catchall.py to catchall.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/laptools.py to laptools.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/pathtools.py to pathtools.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/eigtools.py to eigtools.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/logger.py to logger.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/utilities/misctools.py to misctools.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/domain_decomposition/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/domain_decomposition/spectrus.py to spectrus.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/gamma.py to gamma.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/imanm.py to imanm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/nmdfile.py to nmdfile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/anm.py to anm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/functions.py to functions.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/exgnm.py to exgnm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/adaptive.py to adaptive.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/plotting.py to plotting.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/signature.py to signature.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/gnm.py to gnm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/bbenm.py to bbenm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/clustenm.py to clustenm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/rtb.py to rtb.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/heatmapper.py to heatmapper.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/pca.py to pca.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/modeset.py to modeset.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/sampling.py to sampling.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/essa.py to essa.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/perturb.py to perturb.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/compare.py to compare.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/exanm.py to exanm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/vmdfile.py to vmdfile.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/nma.py to nma.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/entropy.py to entropy.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/mechstiff.py to mechstiff.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/editing.py to editing.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/mode.py to mode.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/dynamics/analysis.py to analysis.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/apptools.py to apptools.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_catdcd.py to prody_catdcd.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_pca.py to prody_pca.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_select.py to prody_select.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_anm.py to prody_anm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_gnm.py to prody_gnm.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_energy.py to prody_energy.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_align.py to prody_align.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_fetch.py to prody_fetch.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_eda.py to prody_eda.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_contacts.py to prody_contacts.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_blast.py to prody_blast.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/nmaoptions.py to nmaoptions.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/prody_apps/prody_biomol.py to prody_biomol.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps/evol_refine.py to evol_refine.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps/evol_search.py to evol_search.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps/evol_filter.py to evol_filter.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps/evol_fetch.py to evol_fetch.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps/evol_merge.py to evol_merge.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps/evol_rankorder.py to evol_rankorder.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps/evol_occupancy.py to evol_occupancy.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps/evol_conserv.py to evol_conserv.cpython-311.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/prody/apps/evol_apps/evol_coevol.py to evol_coevol.cpython-311.pyc running install_egg_info running egg_info creating ProDy.egg-info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt writing manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'pyproject.toml' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' Copying ProDy.egg-info to /<>/debian/python3-prody/usr/lib/python3.11/dist-packages/ProDy-2.3.1.egg-info Skipping SOURCES.txt running install_scripts Installing evol script to /<>/debian/python3-prody/usr/bin Installing prody script to /<>/debian/python3-prody/usr/bin I: pybuild base:240: /usr/bin/python3 setup.py install --root /<>/debian/python3-prody running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running build_ext running install_lib creating /<>/debian/python3-prody/usr/lib/python3.10 creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody copying /<>/.pybuild/cpython3_3.10_prody/build/prody/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin/cluster.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin/functions.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin/straw.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin/norm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin copying /<>/.pybuild/cpython3_3.10_prody/build/prody/chromatin/hic.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/ensemble copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/ensemble/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/ensemble copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/ensemble/test_functions.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/ensemble copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/ensemble/test_conformation.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/ensemble copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/ensemble/test_ensemble.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/ensemble copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/ensemble/test_pdbensemble.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/ensemble creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/measure copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/measure/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/measure copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/measure/test_measure.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/measure copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/measure/test_transform.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/measure copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/measure/test_contacts.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/measure creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/anm1ubi_evalues.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/gnm1ubi_vectors.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb3o21.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb2gb1_truncated.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/exanm2nwl_evalues.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb3mht.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdbRTER.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/msa_Cys_knot.sth -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pca2k39_evalues.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/mmcif_6zu5.cif -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/hit1ubi.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/msa_Cys_knot.slx -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pca2k39_cov.coo -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/rtb2gb1_project.coo -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb2nwl-opm.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb3p3w.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/rtb2gb1_hessian.coo -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/gnm1ubi_evalues.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/anm1ubi_hessian.coo -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb1ejg_oneatom.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb3hsy.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb1ejg.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb1r19_dssp.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb1ubi.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb2k39_ca.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/xmlSTI.xml -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/anm1ubi_vectors.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/msa_Cys_knot.fasta -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb2k39_truncated.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/exanm2nwl_hessian.coo -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/dcd2k39_truncated.dcd -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/msa_Cys_knot_sca.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/exanm2nwl_vectors.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/msa_Cys_knot_di.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pca2k39_vectors.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/commute1ubi.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/pdb1ubi_ca.pdb -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/datafiles/mmcif_6yfy.cif -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/sequence/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/sequence/test_msa.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/sequence/test_analysis.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/sequence/test_sequence.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/sequence/test_msafile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/sequence creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/kdtree copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/kdtree/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/kdtree copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/kdtree/test_kdtree.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/kdtree creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic/test_atomic.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic/test_atommap.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic/test_fragment.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic/test_hierview.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic/test_subset.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic/test_select.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins/test_pdbfile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins/test_dssp.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins/test_ciffile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins/test_localpdb.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins/test_header.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/proteins/test_wwpdb.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/trajectory copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/trajectory/test_frame.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/trajectory copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/trajectory/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/trajectory copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/trajectory/test_dcdfile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/trajectory creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/utilities/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/utilities/test_misctools.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/utilities/test_checkers.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/utilities/test_pathtools.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/utilities creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/dynamics/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/dynamics/test_editing.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/dynamics/test_pca.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/dynamics/test_enms.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/dynamics/test_signature.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/dynamics creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps/test_prody_gnm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps/test_prody_pca.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps/test_prody_anm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps/test_prody_examples.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/tests/apps/test_prody_catdcd.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/ensemble copying /<>/.pybuild/cpython3_3.10_prody/build/prody/ensemble/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/ensemble copying /<>/.pybuild/cpython3_3.10_prody/build/prody/ensemble/functions.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/ensemble copying /<>/.pybuild/cpython3_3.10_prody/build/prody/ensemble/conformation.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/ensemble copying /<>/.pybuild/cpython3_3.10_prody/build/prody/ensemble/ensemble.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/ensemble copying /<>/.pybuild/cpython3_3.10_prody/build/prody/ensemble/pdbensemble.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/ensemble creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/measure copying /<>/.pybuild/cpython3_3.10_prody/build/prody/measure/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/measure copying /<>/.pybuild/cpython3_3.10_prody/build/prody/measure/contacts.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/measure copying /<>/.pybuild/cpython3_3.10_prody/build/prody/measure/measure.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/measure copying /<>/.pybuild/cpython3_3.10_prody/build/prody/measure/transform.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/measure creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/msaio.cpython-310-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/seqtools.cpython-310-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/plotting.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/sequence.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/msafile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/msatools.cpython-310-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/msa.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence copying /<>/.pybuild/cpython3_3.10_prody/build/prody/sequence/analysis.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/kdtree copying /<>/.pybuild/cpython3_3.10_prody/build/prody/kdtree/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/kdtree copying /<>/.pybuild/cpython3_3.10_prody/build/prody/kdtree/kdtree.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/kdtree copying /<>/.pybuild/cpython3_3.10_prody/build/prody/kdtree/_CKDTree.cpython-310-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/kdtree creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/atomic.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/functions.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/donor.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/chain.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/improper.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/hierview.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/atom.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/flags.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/crossterm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/atomgroup.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/subset.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/atommap.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/acceptor.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/selection.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/angle.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/bond.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/pointer.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/dihedral.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/residue.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/select.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/nbexclusion.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/segment.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic copying /<>/.pybuild/cpython3_3.10_prody/build/prody/atomic/fields.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/functions.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/wwpdb.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/ciffile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/header.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/cifheader.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/pdbclusters.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/emdfile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/compare.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/pdbfile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/blastpdb.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/starfile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/dssp.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/ccealign.cpython-310-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/localpdb.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins copying /<>/.pybuild/cpython3_3.10_prody/build/prody/proteins/stride.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory/trajbase.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory/frame.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory/dcdfile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory/trajectory.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory/trajfile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory copying /<>/.pybuild/cpython3_3.10_prody/build/prody/trajectory/psffile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/compounds copying /<>/.pybuild/cpython3_3.10_prody/build/prody/compounds/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/compounds copying /<>/.pybuild/cpython3_3.10_prody/build/prody/compounds/functions.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/compounds copying /<>/.pybuild/cpython3_3.10_prody/build/prody/compounds/bird.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/compounds copying /<>/.pybuild/cpython3_3.10_prody/build/prody/compounds/pdbligands.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/compounds copying /<>/.pybuild/cpython3_3.10_prody/build/prody/compounds/ccd.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/compounds creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.10_prody/build/prody/database/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.10_prody/build/prody/database/uniprot.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.10_prody/build/prody/database/cath.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.10_prody/build/prody/database/goa.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.10_prody/build/prody/database/quartataweb.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.10_prody/build/prody/database/dali.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database copying /<>/.pybuild/cpython3_3.10_prody/build/prody/database/pfam.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/settings.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/drawtools.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/seqtools.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/doctools.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/checkers.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/legacy.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/TreeConstruction.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/catchall.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/datafiles/saxs_water.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/datafiles/mod_res_map.dat -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/datafiles copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/laptools.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/pathtools.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/eigtools.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/logger.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities copying /<>/.pybuild/cpython3_3.10_prody/build/prody/utilities/misctools.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/domain_decomposition copying /<>/.pybuild/cpython3_3.10_prody/build/prody/domain_decomposition/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/domain_decomposition copying /<>/.pybuild/cpython3_3.10_prody/build/prody/domain_decomposition/spectrus.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/domain_decomposition creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/gamma.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/imanm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/nmdfile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/anm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/functions.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/exgnm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/adaptive.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/plotting.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/rtbtools.cpython-310-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/smtools.cpython-310-riscv64-linux-gnu.so -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/signature.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/gnm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/bbenm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/clustenm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/rtb.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/heatmapper.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/pca.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/modeset.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/sampling.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/essa.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/perturb.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/compare.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/exanm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/vmdfile.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/nma.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/entropy.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/mechstiff.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/editing.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/mode.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics copying /<>/.pybuild/cpython3_3.10_prody/build/prody/dynamics/analysis.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/apptools.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_catdcd.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_pca.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_select.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_anm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_gnm.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_energy.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_align.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_fetch.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_eda.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_contacts.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_blast.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/nmaoptions.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/prody_apps/prody_biomol.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps creating /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps/__init__.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps/evol_refine.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps/evol_search.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps/evol_filter.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps/evol_fetch.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps/evol_merge.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps/evol_rankorder.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps/evol_occupancy.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps/evol_conserv.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps copying /<>/.pybuild/cpython3_3.10_prody/build/prody/apps/evol_apps/evol_coevol.py -> /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin/cluster.py to cluster.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin/functions.py to functions.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin/straw.py to straw.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin/norm.py to norm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/chromatin/hic.py to hic.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/ensemble/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/ensemble/test_functions.py to test_functions.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/ensemble/test_conformation.py to test_conformation.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/ensemble/test_ensemble.py to test_ensemble.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/ensemble/test_pdbensemble.py to test_pdbensemble.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/measure/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/measure/test_measure.py to test_measure.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/measure/test_transform.py to test_transform.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/measure/test_contacts.py to test_contacts.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/datafiles/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/sequence/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/sequence/test_msa.py to test_msa.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/sequence/test_analysis.py to test_analysis.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/sequence/test_sequence.py to test_sequence.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/sequence/test_msafile.py to test_msafile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/kdtree/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/kdtree/test_kdtree.py to test_kdtree.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic/test_atomic.py to test_atomic.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic/test_atommap.py to test_atommap.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic/test_fragment.py to test_fragment.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic/test_hierview.py to test_hierview.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic/test_subset.py to test_subset.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/atomic/test_select.py to test_select.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins/test_pdbfile.py to test_pdbfile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins/test_dssp.py to test_dssp.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins/test_ciffile.py to test_ciffile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins/test_localpdb.py to test_localpdb.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins/test_header.py to test_header.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/proteins/test_wwpdb.py to test_wwpdb.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/trajectory/test_frame.py to test_frame.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/trajectory/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/trajectory/test_dcdfile.py to test_dcdfile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/utilities/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/utilities/test_misctools.py to test_misctools.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/utilities/test_checkers.py to test_checkers.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/utilities/test_pathtools.py to test_pathtools.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/dynamics/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/dynamics/test_editing.py to test_editing.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/dynamics/test_pca.py to test_pca.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/dynamics/test_enms.py to test_enms.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/dynamics/test_signature.py to test_signature.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps/test_prody_gnm.py to test_prody_gnm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps/test_prody_pca.py to test_prody_pca.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps/test_prody_anm.py to test_prody_anm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps/test_prody_examples.py to test_prody_examples.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/tests/apps/test_prody_catdcd.py to test_prody_catdcd.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/ensemble/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/ensemble/functions.py to functions.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/ensemble/conformation.py to conformation.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/ensemble/ensemble.py to ensemble.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/ensemble/pdbensemble.py to pdbensemble.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/measure/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/measure/contacts.py to contacts.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/measure/measure.py to measure.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/measure/transform.py to transform.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence/plotting.py to plotting.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence/sequence.py to sequence.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence/msafile.py to msafile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence/msa.py to msa.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/sequence/analysis.py to analysis.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/kdtree/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/kdtree/kdtree.py to kdtree.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/atomic.py to atomic.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/functions.py to functions.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/donor.py to donor.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/chain.py to chain.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/improper.py to improper.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/hierview.py to hierview.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/atom.py to atom.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/flags.py to flags.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/crossterm.py to crossterm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/atomgroup.py to atomgroup.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/subset.py to subset.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/atommap.py to atommap.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/acceptor.py to acceptor.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/selection.py to selection.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/angle.py to angle.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/bond.py to bond.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/pointer.py to pointer.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/dihedral.py to dihedral.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/residue.py to residue.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/select.py to select.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/nbexclusion.py to nbexclusion.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/segment.py to segment.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/atomic/fields.py to fields.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/functions.py to functions.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/wwpdb.py to wwpdb.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/ciffile.py to ciffile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/header.py to header.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/cifheader.py to cifheader.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/pdbclusters.py to pdbclusters.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/emdfile.py to emdfile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/compare.py to compare.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/pdbfile.py to pdbfile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/blastpdb.py to blastpdb.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/starfile.py to starfile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/dssp.py to dssp.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/localpdb.py to localpdb.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/proteins/stride.py to stride.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory/trajbase.py to trajbase.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory/frame.py to frame.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory/dcdfile.py to dcdfile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory/trajectory.py to trajectory.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory/trajfile.py to trajfile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/trajectory/psffile.py to psffile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/compounds/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/compounds/functions.py to functions.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/compounds/bird.py to bird.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/compounds/pdbligands.py to pdbligands.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/compounds/ccd.py to ccd.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database/uniprot.py to uniprot.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database/cath.py to cath.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database/goa.py to goa.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database/quartataweb.py to quartataweb.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database/dali.py to dali.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/database/pfam.py to pfam.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/settings.py to settings.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/drawtools.py to drawtools.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/seqtools.py to seqtools.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/doctools.py to doctools.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/checkers.py to checkers.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/legacy.py to legacy.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/TreeConstruction.py to TreeConstruction.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/catchall.py to catchall.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/laptools.py to laptools.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/pathtools.py to pathtools.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/eigtools.py to eigtools.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/logger.py to logger.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/utilities/misctools.py to misctools.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/domain_decomposition/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/domain_decomposition/spectrus.py to spectrus.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/gamma.py to gamma.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/imanm.py to imanm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/nmdfile.py to nmdfile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/anm.py to anm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/functions.py to functions.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/exgnm.py to exgnm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/adaptive.py to adaptive.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/plotting.py to plotting.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/signature.py to signature.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/gnm.py to gnm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/bbenm.py to bbenm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/clustenm.py to clustenm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/rtb.py to rtb.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/heatmapper.py to heatmapper.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/pca.py to pca.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/modeset.py to modeset.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/sampling.py to sampling.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/essa.py to essa.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/perturb.py to perturb.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/compare.py to compare.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/exanm.py to exanm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/vmdfile.py to vmdfile.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/nma.py to nma.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/entropy.py to entropy.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/mechstiff.py to mechstiff.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/editing.py to editing.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/mode.py to mode.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/dynamics/analysis.py to analysis.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/apptools.py to apptools.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_catdcd.py to prody_catdcd.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_pca.py to prody_pca.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_select.py to prody_select.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_anm.py to prody_anm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_gnm.py to prody_gnm.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_energy.py to prody_energy.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_align.py to prody_align.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_fetch.py to prody_fetch.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_eda.py to prody_eda.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_contacts.py to prody_contacts.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_blast.py to prody_blast.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/nmaoptions.py to nmaoptions.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/prody_apps/prody_biomol.py to prody_biomol.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps/evol_refine.py to evol_refine.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps/evol_search.py to evol_search.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps/evol_filter.py to evol_filter.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps/evol_fetch.py to evol_fetch.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps/evol_merge.py to evol_merge.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps/evol_rankorder.py to evol_rankorder.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps/evol_occupancy.py to evol_occupancy.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps/evol_conserv.py to evol_conserv.cpython-310.pyc byte-compiling /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/prody/apps/evol_apps/evol_coevol.py to evol_coevol.cpython-310.pyc running install_egg_info running egg_info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'pyproject.toml' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' Copying ProDy.egg-info to /<>/debian/python3-prody/usr/lib/python3.10/dist-packages/ProDy-2.3.1.egg-info Skipping SOURCES.txt running install_scripts Installing evol script to /<>/debian/python3-prody/usr/bin Installing prody script to /<>/debian/python3-prody/usr/bin debian/rules override_dh_install make[1]: Entering directory '/<>' for VERSION in $(py3versions --supported); \ do \ mkdir --parents debian/python3-prody-tests/usr/lib/${VERSION}/dist-packages/prody; \ mv debian/python3-prody/usr/lib/${VERSION}/dist-packages/prody/tests debian/python3-prody-tests/usr/lib/${VERSION}/dist-packages/prody; \ done dh_install make[1]: Leaving directory '/<>' dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_installman -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/sequence/msaio.cpython-310-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 73a126a5064beaff8a730e2a69ca26707de7b2dd debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/sequence/seqtools.cpython-310-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 b549f7f8a763a17066a03e3e7d2028dc591878b1 debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/sequence/msaio.cpython-311-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 9fd8cb767db1435cd5e6298fef0fb0fc30c3185b debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/sequence/msatools.cpython-311-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 733119204b44256c3def4867a6036794ee141edd debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/sequence/seqtools.cpython-311-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 bb119a4d7a73dc61f17c494b03ce8d34f8e33392 debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/sequence/msatools.cpython-310-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 3158e2dad1436e9156e88723ccf815edf8eae83a debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/kdtree/_CKDTree.cpython-311-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 1347a12043f0996361943582810695de14e6c7a8 debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/kdtree/_CKDTree.cpython-310-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 05a1ad6228a2b916748cae9470a2c4febc7b9b06 debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/proteins/ccealign.cpython-311-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 df1ff2ee657f98956c6c73a4196b07dfbb5d2add debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/proteins/ccealign.cpython-310-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 2362a5906fb67b3aae024aeb51530c517b515f15 debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/dynamics/rtbtools.cpython-310-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 9d54893c15dcd60674deecda424f09af7adc81fb debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/dynamics/smtools.cpython-310-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 f7b2deb48624f044f1859c1f72d7a2ce8d51d39b debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/dynamics/smtools.cpython-311-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 3e1321a74ee15b3687e0dee322da791808086dd1 debugedit: debian/python3-prody/usr/lib/python3/dist-packages/prody/dynamics/rtbtools.cpython-311-riscv64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 6a9cd9376ce485786b8377f980ca64dae30f001f dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -a -O--buildsystem=pybuild dh_numpy3 -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: Provides field of package python3-prody: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-prody: substitution variable ${python3:Provides} used, but is not defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild INFO: pkgstriptranslations version 149 INFO: pkgstriptranslations version 149 pkgstriptranslations: processing python3-prody (in debian/python3-prody); do_strip: , oemstrip: pkgstriptranslations: processing python3-prody-dbgsym (in debian/.debhelper/python3-prody/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python3-prody/DEBIAN/control, package python3-prody, directory debian/python3-prody pkgstripfiles: Running PNG optimization (using 8 cpus) for package python3-prody ... pkgstripfiles: processing control file: debian/.debhelper/python3-prody/dbgsym-root/DEBIAN/control, package python3-prody-dbgsym, directory debian/.debhelper/python3-prody/dbgsym-root dpkg-deb: building package 'python3-prody-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-prody/python3-prody-dbgsym_2.3.1+dfsg-2_riscv64.deb'. pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-prody' in '../python3-prody_2.3.1+dfsg-2_riscv64.deb'. Renaming python3-prody-dbgsym_2.3.1+dfsg-2_riscv64.deb to python3-prody-dbgsym_2.3.1+dfsg-2_riscv64.ddeb dpkg-genbuildinfo --build=any -O../prody_2.3.1+dfsg-2_riscv64.buildinfo dpkg-genchanges --build=any -mLaunchpad Build Daemon -O../prody_2.3.1+dfsg-2_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-12-06T18:16:37Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ prody_2.3.1+dfsg-2_riscv64.changes: ----------------------------------- Format: 1.8 Date: Tue, 06 Dec 2022 02:32:42 -0500 Source: prody Binary: python3-prody Built-For-Profiles: noudeb Architecture: riscv64 Version: 2.3.1+dfsg-2 Distribution: lunar-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andrius Merkys Description: python3-prody - Python package for protein dynamics analysis Closes: 1025390 Changes: prody (2.3.1+dfsg-2) unstable; urgency=medium . * python3-prody-tests: add missing Breaks+Replaces: python3-prody (<< 2.3.1) (Closes: #1025390) Checksums-Sha1: 59a3f63fb921e92e428aaa3c10b9ceab22eab9a6 8642 prody_2.3.1+dfsg-2_riscv64.buildinfo 485cfcfcde4ad86855af28f187e0354e94308b29 307972 python3-prody-dbgsym_2.3.1+dfsg-2_riscv64.ddeb 5edafba2741b786d59d641fed07188e55db60b8c 961056 python3-prody_2.3.1+dfsg-2_riscv64.deb Checksums-Sha256: 1a29eb38ecb3eb9d0a22729291604b666ad1fbefa46d85adcee7b6bdb7c553f5 8642 prody_2.3.1+dfsg-2_riscv64.buildinfo 0eb7cfae0b9024e1cf1d12ef754510218fc9967651604d44df6fd0220299a6a2 307972 python3-prody-dbgsym_2.3.1+dfsg-2_riscv64.ddeb b90c54ae02fec0a8889d2dd3ff26fc8725eac2e4ce8c9b58b06dc97ef5b54cd3 961056 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(= 12.9ubuntu3), bzip2 (= 1.0.8-5build1), coreutils (= 8.32-4.1ubuntu1), cpp (= 4:12.2.0-1ubuntu1), cpp-12 (= 12.2.0-9ubuntu1), dash (= 0.5.11+git20210903+057cd650a4ed-8ubuntu1), debconf (= 1.5.80), debhelper (= 13.10.1ubuntu1), debianutils (= 5.7-0.4), debugedit (= 1:5.0-5), dh-autoreconf (= 20), dh-python (= 5.20221202), dh-strip-nondeterminism (= 1.13.0-2), diffutils (= 1:3.8-1), dpkg (= 1.21.12ubuntu1), dpkg-dev (= 1.21.12ubuntu1), dwz (= 0.14+20220924-2), file (= 1:5.41-4), findutils (= 4.9.0-3ubuntu1), fonts-urw-base35 (= 20200910-6), g++ (= 4:12.2.0-1ubuntu1), g++-12 (= 12.2.0-9ubuntu1), gcc (= 4:12.2.0-1ubuntu1), gcc-12 (= 12.2.0-9ubuntu1), gcc-12-base (= 12.2.0-9ubuntu1), gettext (= 0.21-10), gettext-base (= 0.21-10), grep (= 3.8-3), groff-base (= 1.22.4-9), gzip (= 1.12-1ubuntu1), hostname (= 3.23ubuntu2), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-2), libarchive-zip-perl (= 1.68-1), libasan8 (= 12.2.0-9ubuntu1), libatomic1 (= 12.2.0-9ubuntu1), libattr1 (= 1:2.5.1-3), libaudit-common (= 1:3.0.7-1ubuntu2), libaudit1 (= 1:3.0.7-1ubuntu2), libbinutils (= 2.39-8ubuntu2), libblas3 (= 3.11.0-2), libblkid1 (= 2.38.1-4ubuntu1), libboost-dev (= 1.74.0.3ubuntu7), libboost1.74-dev (= 1.74.0-17ubuntu2), libbrotli1 (= 1.0.9-2build7), libbsd0 (= 0.11.7-1), libbz2-1.0 (= 1.0.8-5build1), libc-bin (= 2.36-0ubuntu4), libc-dev-bin (= 2.36-0ubuntu4), libc6 (= 2.36-0ubuntu4), libc6-dev (= 2.36-0ubuntu4), libcap-ng0 (= 0.8.3-1build1), libcap2 (= 1:2.44-1build3), libcc1-0 (= 12.2.0-9ubuntu1), libcom-err2 (= 1.46.6~rc1-1ubuntu1), libcrypt-dev (= 1:4.4.33-1), libcrypt1 (= 1:4.4.33-1), libctf-nobfd0 (= 2.39-8ubuntu2), libctf0 (= 2.39-8ubuntu2), libdb5.3 (= 5.3.28+dfsg1-0.10), libdebconfclient0 (= 0.264ubuntu1), libdebhelper-perl (= 13.10.1ubuntu1), libdeflate0 (= 1.14-1), libdpkg-perl (= 1.21.12ubuntu1), libdw1 (= 0.188-1), libelf1 (= 0.188-1), libexpat1 (= 2.5.0-1), libexpat1-dev (= 2.5.0-1), libffi8 (= 3.4.4-1), libfile-stripnondeterminism-perl (= 1.13.0-2), libfontenc1 (= 1:1.1.4-1build3), libfreetype6 (= 2.12.1+dfsg-3), libfribidi0 (= 1.0.8-2.1ubuntu1), libgcc-12-dev (= 12.2.0-9ubuntu1), libgcc-s1 (= 12.2.0-9ubuntu1), libgcrypt20 (= 1.10.1-2ubuntu1), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgfortran5 (= 12.2.0-9ubuntu1), libglib2.0-0 (= 2.74.2-1), libgmp10 (= 2:6.2.1+dfsg1-1.1ubuntu1), libgomp1 (= 12.2.0-9ubuntu1), libgpg-error0 (= 1.46-1), libgraphite2-3 (= 1.3.14-1build2), libgssapi-krb5-2 (= 1.20.1-1), libharfbuzz0b (= 5.2.0-2), libicu71 (= 71.1-3ubuntu1), libimagequant0 (= 2.17.0-1), libisl23 (= 0.25-1), libjbig0 (= 2.1-6ubuntu1), libjpeg-turbo8 (= 2.1.2-0ubuntu1), libjpeg8 (= 8c-2ubuntu10), libjs-jquery (= 3.6.1+dfsg+~3.5.14-1), libjs-sphinxdoc (= 5.3.0-2), libjs-underscore (= 1.13.4~dfsg+~1.11.4-2), libk5crypto3 (= 1.20.1-1), libkeyutils1 (= 1.6.3-1), libkrb5-3 (= 1.20.1-1), libkrb5support0 (= 1.20.1-1), liblapack3 (= 3.11.0-2), liblbfgsb0 (= 3.0+dfsg.3-11), liblcms2-2 (= 2.13.1-1), liblerc4 (= 4.0.0+ds-2ubuntu2), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.2.9-0.0), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmd0 (= 1.0.4-2), libmount1 (= 2.38.1-4ubuntu1), libmpc3 (= 1.2.1-2build1), libmpdec3 (= 2.5.1-2build2), libmpfr6 (= 4.1.0-3build3), libncursesw6 (= 6.3+20220423-2), libnsl-dev (= 1.3.0-2build2), libnsl2 (= 1.3.0-2build2), libopenblas-dev (= 0.3.21+ds-3), libopenblas-pthread-dev (= 0.3.21+ds-3), libopenblas0 (= 0.3.21+ds-3), libopenblas0-pthread (= 0.3.21+ds-3), libopenjp2-7 (= 2.5.0-1), libpam-modules (= 1.5.2-5ubuntu1), libpam-modules-bin (= 1.5.2-5ubuntu1), libpam-runtime (= 1.5.2-5ubuntu1), libpam0g (= 1.5.2-5ubuntu1), libpcre2-8-0 (= 10.40-1ubuntu1), libperl5.36 (= 5.36.0-4ubuntu2), libpipeline1 (= 1.5.7-1), libpng16-16 (= 1.6.39-2), libpython3-all-dev (= 3.10.6-1ubuntu1), libpython3-dev (= 3.10.6-1ubuntu1), libpython3-stdlib (= 3.10.6-1ubuntu1), libpython3.10 (= 3.10.8-3), libpython3.10-dev (= 3.10.8-3), libpython3.10-minimal (= 3.10.8-3), libpython3.10-stdlib (= 3.10.8-3), libpython3.11 (= 3.11.0-3), libpython3.11-dev (= 3.11.0-3), libpython3.11-minimal (= 3.11.0-3), libpython3.11-stdlib (= 3.11.0-3), libraqm0 (= 0.7.0-4ubuntu1), libreadline8 (= 8.2-1.2), libselinux1 (= 3.4-1build1), libsmartcols1 (= 2.38.1-4ubuntu1), libsqlite3-0 (= 3.40.0-1), libssl3 (= 3.0.5-2ubuntu2), libstdc++-12-dev (= 12.2.0-9ubuntu1), libstdc++6 (= 12.2.0-9ubuntu1), libsub-override-perl (= 0.09-4), libsystemd0 (= 251.4-1ubuntu7), libtiff5 (= 4.4.0-6ubuntu1), libtinfo6 (= 6.3+20220423-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-5), libuchardet0 (= 0.0.7-1build2), libudev1 (= 251.4-1ubuntu7), libunistring2 (= 1.0-2), libuuid1 (= 2.38.1-4ubuntu1), libwebp7 (= 1.2.2-2build1), libwebpdemux2 (= 1.2.2-2build1), libwebpmux3 (= 1.2.2-2build1), libxau6 (= 1:1.0.9-1build5), libxcb1 (= 1.15-1), libxdmcp6 (= 1:1.1.3-0ubuntu5), libxml2 (= 2.9.14+dfsg-1.1), libxsimd-dev (= 8.1.0-7), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 5.19.0-23.24), login (= 1:4.13+dfsg1-1ubuntu1), lto-disabled-list (= 36), m4 (= 1.4.19-1), mailcap (= 3.70+nmu1ubuntu1), make (= 4.3-4.1build1), man-db (= 2.11.1-1), mawk (= 1.3.4.20200120-3.1), media-types (= 8.0.0), mime-support (= 3.66), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), patch (= 2.7.6-7build2), perl (= 5.36.0-4ubuntu2), perl-base (= 5.36.0-4ubuntu2), perl-modules-5.36 (= 5.36.0-4ubuntu2), po-debconf (= 1.0.21+nmu1), python3 (= 3.10.6-1ubuntu1), python3-all (= 3.10.6-1ubuntu1), python3-all-dev (= 3.10.6-1ubuntu1), python3-beniget (= 0.4.1-3), python3-biopython (= 1.80+dfsg-2), python3-decorator (= 4.4.2-0ubuntu1), python3-dev (= 3.10.6-1ubuntu1), python3-distutils (= 3.10.8-1), python3-gast (= 0.5.2-2), python3-lib2to3 (= 3.10.8-1), python3-minimal (= 3.10.6-1ubuntu1), python3-numpy (= 1:1.21.5-1ubuntu1), python3-pil (= 9.2.0-1.1ubuntu1), python3-pkg-resources (= 65.5.0-1), python3-ply (= 3.11-5), python3-pyparsing (= 3.0.7-3), python3-pythran (= 0.11.0+ds-7), python3-renderpm (= 3.6.11-1build1), python3-reportlab (= 3.6.11-1build1), python3-reportlab-accel (= 3.6.11-1build1), python3-scipy (= 1.8.1-14), python3-setuptools (= 65.5.0-1), python3.10 (= 3.10.8-3), python3.10-dev (= 3.10.8-3), python3.10-minimal (= 3.10.8-3), python3.11 (= 3.11.0-3), python3.11-dev (= 3.11.0-3), python3.11-minimal (= 3.11.0-3), readline-common (= 8.2-1.2), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.8-1ubuntu2), sensible-utils (= 0.0.17), sgml-base (= 1.31), sysvinit-utils (= 3.05-7ubuntu1), tar (= 1.34+dfsg-1.1), usrmerge (= 33ubuntu1), util-linux (= 2.38.1-4ubuntu1), util-linux-extra (= 2.38.1-4ubuntu1), w3c-sgml-lib (= 1.3-3), x11-common (= 1:7.7+23ubuntu2), xfonts-encodings (= 1:1.0.5-0ubuntu2), xfonts-utils (= 1:7.7+6build2), xml-core (= 0.18+nmu1), xz-utils (= 5.2.9-0.0), zlib1g (= 1:1.2.13.dfsg-1ubuntu2), zlib1g-dev (= 1:1.2.13.dfsg-1ubuntu2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=8" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1670311962" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ python3-prody_2.3.1+dfsg-2_riscv64.deb -------------------------------------- new Debian package, version 2.0. size 961056 bytes: control archive=5721 bytes. 1009 bytes, 18 lines control 16794 bytes, 180 lines md5sums 277 bytes, 12 lines * postinst #!/bin/sh 390 bytes, 12 lines * prerm #!/bin/sh Package: python3-prody Source: prody Version: 2.3.1+dfsg-2 Architecture: riscv64 Maintainer: Ubuntu Developers Original-Maintainer: Debichem Team Installed-Size: 3856 Depends: python3 (<< 3.12), python3 (>= 3.10~), python3-biopython, python3-numpy (>= 1:1.20.0), python3-numpy-abi9, python3-pyparsing, python3-scipy, python3:any, libc6 (>= 2.27), libgcc-s1 (>= 3.0), libstdc++6 (>= 5) Section: science Priority: optional Homepage: https://github.com/prody/ProDy Description: Python package for protein dynamics analysis ProDy is a free and open-source Python package for protein structure, dynamics, and sequence analysis. It allows for comparative analysis and modeling of protein structural dynamics and sequence co-evolution. Fast and flexible ProDy API is for interactive usage as well as application development. ProDy also comes with several analysis applications and a graphical user interface for visual analysis. drwxr-xr-x root/root 0 2022-12-06 07:32 ./ drwxr-xr-x root/root 0 2022-12-06 07:32 ./usr/ drwxr-xr-x root/root 0 2022-12-06 07:32 ./usr/bin/ -rwxr-xr-x root/root 946 2022-12-06 07:32 ./usr/bin/evol -rwxr-xr-x root/root 948 2022-12-06 07:32 ./usr/bin/prody drwxr-xr-x root/root 0 2022-12-06 07:32 ./usr/lib/ drwxr-xr-x root/root 0 2022-12-06 07:32 ./usr/lib/python3/ drwxr-xr-x root/root 0 2022-12-06 07:32 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2022-12-06 07:32 ./usr/lib/python3/dist-packages/ProDy-2.3.1.egg-info/ -rw-r--r-- root/root 3396 2022-12-06 07:32 ./usr/lib/python3/dist-packages/ProDy-2.3.1.egg-info/PKG-INFO -rw-r--r-- root/root 1 2022-12-06 07:32 ./usr/lib/python3/dist-packages/ProDy-2.3.1.egg-info/dependency_links.txt -rw-r--r-- root/root 76 2022-12-06 07:32 ./usr/lib/python3/dist-packages/ProDy-2.3.1.egg-info/entry_points.txt -rw-r--r-- root/root 0 2022-12-06 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root/root 0 2022-12-06 07:32 ./usr/share/ drwxr-xr-x root/root 0 2022-12-06 07:32 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-12-06 07:32 ./usr/share/doc/python3-prody/ -rw-r--r-- root/root 533 2022-12-06 07:32 ./usr/share/doc/python3-prody/changelog.Debian.gz -rw-r--r-- root/root 6367 2022-12-01 11:35 ./usr/share/doc/python3-prody/copyright drwxr-xr-x root/root 0 2022-12-06 07:32 ./usr/share/man/ drwxr-xr-x root/root 0 2022-12-06 07:32 ./usr/share/man/man1/ -rw-r--r-- root/root 641 2022-12-06 07:32 ./usr/share/man/man1/evol.1.gz -rw-r--r-- root/root 661 2022-12-06 07:32 ./usr/share/man/man1/prody.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: riscv64 Build Type: any Build-Space: 373760 Build-Time: 554 Distribution: lunar-proposed Host Architecture: riscv64 Install-Time: 1775 Job: prody_2.3.1+dfsg-2.dsc Machine Architecture: riscv64 Package: prody Package-Time: 2371 Source-Version: 2.3.1+dfsg-2 Space: 373760 Status: successful Version: 2.3.1+dfsg-2 -------------------------------------------------------------------------------- Finished at 2022-12-06T18:16:37Z Build needed 00:39:31, 373760k disk space Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=lunar --arch=riscv64 PACKAGEBUILD-24905025 Scanning for processes to kill in build PACKAGEBUILD-24905025 RUN: /usr/share/launchpad-buildd/bin/in-target umount-chroot --backend=chroot --series=lunar --arch=riscv64 PACKAGEBUILD-24905025 Stopping target for build PACKAGEBUILD-24905025 RUN: /usr/share/launchpad-buildd/bin/in-target remove-build --backend=chroot --series=lunar --arch=riscv64 PACKAGEBUILD-24905025 Removing build PACKAGEBUILD-24905025