RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux bos01-ppc64el-007 4.4.0-31-generic #50-Ubuntu SMP Wed Jul 13 00:05:18 UTC 2016 ppc64le Buildd toolchain package versions: launchpad-buildd_139 python-lpbuildd_139 sbuild_0.67.0-2ubuntu7 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu2 git-build-recipe_0.3.2 git_1:2.7.4-0ubuntu1 dpkg-dev_1.18.4ubuntu1.1 python-debian_0.1.27ubuntu2 qemu-user-static_1:2.5+dfsg-5ubuntu10.2. Syncing the system clock with the buildd NTP service... 2 Nov 04:31:39 ntpdate[1625]: adjust time server 10.211.37.1 offset 0.008733 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-11123063', '/home/buildd/filecache-default/13c837fa8f013503c65d7b6fd85343da86753929'] Unpacking chroot for build PACKAGEBUILD-11123063 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-11123063'] Mounting chroot for build PACKAGEBUILD-11123063 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-11123063', 'deb http://ftpmaster.internal/ubuntu zesty main universe', 'deb http://ftpmaster.internal/ubuntu zesty-security main universe', 'deb http://ftpmaster.internal/ubuntu zesty-updates main universe', 'deb http://ftpmaster.internal/ubuntu zesty-proposed main universe'] Overriding sources.list in build-PACKAGEBUILD-11123063 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-11123063', 'ppc64el'] Updating debian chroot for build PACKAGEBUILD-11123063 Get:1 http://ftpmaster.internal/ubuntu zesty InRelease [247 kB] Get:2 http://ftpmaster.internal/ubuntu zesty-security InRelease [92.2 kB] Get:3 http://ftpmaster.internal/ubuntu zesty-updates InRelease [92.1 kB] Get:4 http://ftpmaster.internal/ubuntu zesty-proposed InRelease [95.6 kB] Get:5 http://ftpmaster.internal/ubuntu zesty/main ppc64el Packages [1162 kB] Get:6 http://ftpmaster.internal/ubuntu zesty/main Translation-en [583 kB] Get:7 http://ftpmaster.internal/ubuntu zesty/universe ppc64el Packages [7476 kB] Get:8 http://ftpmaster.internal/ubuntu zesty/universe Translation-en [4486 kB] Get:9 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el Packages [49.5 kB] Get:10 http://ftpmaster.internal/ubuntu zesty-proposed/main Translation-en [30.4 kB] Get:11 http://ftpmaster.internal/ubuntu zesty-proposed/universe ppc64el Packages [166 kB] Get:12 http://ftpmaster.internal/ubuntu zesty-proposed/universe Translation-en [88.1 kB] Fetched 14.6 MB in 3s (3969 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libperl5.22 perl-modules-5.22 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libperl5.24 perl-modules-5.24 The following packages will be upgraded: adduser base-files binutils cpp-6 dmsetup g++-6 gcc-6 gcc-6-base libapparmor1 libasan3 libasn1-8-heimdal libatomic1 libcc1-0 libdevmapper1.02.1 libgcc-6-dev libgcc1 libgomp1 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libitm1 libkrb5-26-heimdal libldap-2.4-2 liblzma5 libroken18-heimdal libstdc++-6-dev libstdc++6 libsystemd0 libubsan0 libudev1 libwind0-heimdal linux-libc-dev perl perl-base systemd systemd-sysv tzdata ubuntu-keyring xz-utils 41 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 36.0 MB of archives. After this operation, 42.2 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu zesty/main ppc64el base-files ppc64el 9.6ubuntu6 [55.8 kB] Get:2 http://ftpmaster.internal/ubuntu zesty/main ppc64el perl-modules-5.24 all 5.24.1~rc3-3 [2661 kB] Get:3 http://ftpmaster.internal/ubuntu zesty/main ppc64el libperl5.24 ppc64el 5.24.1~rc3-3 [3294 kB] Get:4 http://ftpmaster.internal/ubuntu zesty/main ppc64el perl ppc64el 5.24.1~rc3-3 [237 kB] Get:5 http://ftpmaster.internal/ubuntu zesty/main ppc64el perl-base ppc64el 5.24.1~rc3-3 [1228 kB] Get:6 http://ftpmaster.internal/ubuntu zesty/main ppc64el libapparmor1 ppc64el 2.10.95-4ubuntu5.2 [30.0 kB] Get:7 http://ftpmaster.internal/ubuntu zesty/main ppc64el liblzma5 ppc64el 5.2.2-1.2 [101 kB] Get:8 http://ftpmaster.internal/ubuntu zesty/main ppc64el adduser all 3.113+nmu3ubuntu5 [161 kB] Get:9 http://ftpmaster.internal/ubuntu zesty/main ppc64el systemd ppc64el 231-10 [2094 kB] Get:10 http://ftpmaster.internal/ubuntu zesty/main ppc64el libsystemd0 ppc64el 231-10 [203 kB] Get:11 http://ftpmaster.internal/ubuntu zesty/main ppc64el systemd-sysv ppc64el 231-10 [14.3 kB] Get:12 http://ftpmaster.internal/ubuntu zesty/main ppc64el libgomp1 ppc64el 6.2.0-10ubuntu1 [66.9 kB] Get:13 http://ftpmaster.internal/ubuntu zesty/main ppc64el libitm1 ppc64el 6.2.0-10ubuntu1 [28.2 kB] Get:14 http://ftpmaster.internal/ubuntu zesty/main ppc64el libcc1-0 ppc64el 6.2.0-10ubuntu1 [30.6 kB] Get:15 http://ftpmaster.internal/ubuntu zesty/main ppc64el libatomic1 ppc64el 6.2.0-10ubuntu1 [8230 B] Get:16 http://ftpmaster.internal/ubuntu zesty/main ppc64el libasan3 ppc64el 6.2.0-10ubuntu1 [272 kB] Get:17 http://ftpmaster.internal/ubuntu zesty/main ppc64el libubsan0 ppc64el 6.2.0-10ubuntu1 [104 kB] Get:18 http://ftpmaster.internal/ubuntu zesty/main ppc64el gcc-6-base ppc64el 6.2.0-10ubuntu1 [17.3 kB] Get:19 http://ftpmaster.internal/ubuntu zesty/main ppc64el libstdc++6 ppc64el 6.2.0-10ubuntu1 [418 kB] Get:20 http://ftpmaster.internal/ubuntu zesty/main ppc64el g++-6 ppc64el 6.2.0-10ubuntu1 [6428 kB] Get:21 http://ftpmaster.internal/ubuntu zesty/main ppc64el libstdc++-6-dev ppc64el 6.2.0-10ubuntu1 [1431 kB] Get:22 http://ftpmaster.internal/ubuntu zesty/main ppc64el libgcc-6-dev ppc64el 6.2.0-10ubuntu1 [658 kB] Get:23 http://ftpmaster.internal/ubuntu zesty/main ppc64el gcc-6 ppc64el 6.2.0-10ubuntu1 [6191 kB] Get:24 http://ftpmaster.internal/ubuntu zesty/main ppc64el cpp-6 ppc64el 6.2.0-10ubuntu1 [5670 kB] Get:25 http://ftpmaster.internal/ubuntu zesty/main ppc64el libgcc1 ppc64el 1:6.2.0-10ubuntu1 [27.2 kB] Get:26 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el binutils ppc64el 2.27-9ubuntu1 [2312 kB] Get:27 http://ftpmaster.internal/ubuntu zesty/main ppc64el libudev1 ppc64el 231-10 [54.8 kB] Get:28 http://ftpmaster.internal/ubuntu zesty/main ppc64el ubuntu-keyring all 2016.10.27 [16.6 kB] Get:29 http://ftpmaster.internal/ubuntu zesty/main ppc64el tzdata all 2016h-1 [169 kB] Get:30 http://ftpmaster.internal/ubuntu zesty/main ppc64el libdevmapper1.02.1 ppc64el 2:1.02.133-1ubuntu1 [151 kB] Get:31 http://ftpmaster.internal/ubuntu zesty/main ppc64el dmsetup ppc64el 2:1.02.133-1ubuntu1 [75.3 kB] Get:32 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el libroken18-heimdal ppc64el 1.7~git20160703+dfsg-1 [39.3 kB] Get:33 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el libasn1-8-heimdal ppc64el 1.7~git20160703+dfsg-1 [138 kB] Get:34 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el libheimbase1-heimdal ppc64el 1.7~git20160703+dfsg-1 [28.6 kB] Get:35 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el libhcrypto4-heimdal ppc64el 1.7~git20160703+dfsg-1 [96.9 kB] Get:36 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el libwind0-heimdal ppc64el 1.7~git20160703+dfsg-1 [48.0 kB] Get:37 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el libhx509-5-heimdal ppc64el 1.7~git20160703+dfsg-1 [102 kB] Get:38 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el libkrb5-26-heimdal ppc64el 1.7~git20160703+dfsg-1 [190 kB] Get:39 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el libheimntlm0-heimdal ppc64el 1.7~git20160703+dfsg-1 [15.6 kB] Get:40 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el libgssapi3-heimdal ppc64el 1.7~git20160703+dfsg-1 [86.9 kB] Get:41 http://ftpmaster.internal/ubuntu zesty/main ppc64el libldap-2.4-2 ppc64el 2.4.42+dfsg-2ubuntu5 [151 kB] Get:42 http://ftpmaster.internal/ubuntu zesty/main ppc64el xz-utils ppc64el 5.2.2-1.2 [82.5 kB] Get:43 http://ftpmaster.internal/ubuntu zesty-proposed/main ppc64el linux-libc-dev ppc64el 4.8.0-27.29 [843 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 36.0 MB in 2s (12.7 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12166 files and directories currently installed.) Preparing to unpack .../base-files_9.6ubuntu6_ppc64el.deb ... Unpacking base-files (9.6ubuntu6) over (9.6ubuntu5) ... Setting up base-files (9.6ubuntu6) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12166 files and directories currently installed.) Preparing to unpack .../0-perl_5.24.1~rc3-3_ppc64el.deb ... Unpacking perl (5.24.1~rc3-3) over (5.22.2-3) ... Selecting previously unselected package perl-modules-5.24. Preparing to unpack .../1-perl-modules-5.24_5.24.1~rc3-3_all.deb ... Unpacking perl-modules-5.24 (5.24.1~rc3-3) ... Selecting previously unselected package libperl5.24:ppc64el. Preparing to unpack .../2-libperl5.24_5.24.1~rc3-3_ppc64el.deb ... Unpacking libperl5.24:ppc64el (5.24.1~rc3-3) ... Preparing to unpack .../3-perl-base_5.24.1~rc3-3_ppc64el.deb ... Unpacking perl-base (5.24.1~rc3-3) over (5.22.2-3) ... Setting up perl-base (5.24.1~rc3-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13956 files and directories currently installed.) Preparing to unpack .../0-libapparmor1_2.10.95-4ubuntu5.2_ppc64el.deb ... Unpacking libapparmor1:ppc64el (2.10.95-4ubuntu5.2) over (2.10.95-4ubuntu5) ... Preparing to unpack .../1-liblzma5_5.2.2-1.2_ppc64el.deb ... Unpacking liblzma5:ppc64el (5.2.2-1.2) over (5.1.1alpha+20120614-2.1ubuntu1) ... Setting up liblzma5:ppc64el (5.2.2-1.2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13956 files and directories currently installed.) Preparing to unpack .../adduser_3.113+nmu3ubuntu5_all.deb ... Unpacking adduser (3.113+nmu3ubuntu5) over (3.113+nmu3ubuntu4) ... Setting up adduser (3.113+nmu3ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13956 files and directories currently installed.) Preparing to unpack .../0-systemd_231-10_ppc64el.deb ... Unpacking systemd (231-10) over (231-9git1) ... Preparing to unpack .../1-libsystemd0_231-10_ppc64el.deb ... Unpacking libsystemd0:ppc64el (231-10) over (231-9git1) ... Setting up libsystemd0:ppc64el (231-10) ... Setting up libapparmor1:ppc64el (2.10.95-4ubuntu5.2) ... Setting up systemd (231-10) ... Installing new version of config file /etc/systemd/resolved.conf ... addgroup: The group `systemd-journal' already exists as a system group. Exiting. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13952 files and directories currently installed.) Preparing to unpack .../0-systemd-sysv_231-10_ppc64el.deb ... Unpacking systemd-sysv (231-10) over (231-9git1) ... Preparing to unpack .../1-libgomp1_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking libgomp1:ppc64el (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Preparing to unpack .../2-libitm1_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking libitm1:ppc64el (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Preparing to unpack .../3-libcc1-0_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking libcc1-0:ppc64el (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Preparing to unpack .../4-libatomic1_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking libatomic1:ppc64el (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Preparing to unpack .../5-libasan3_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking libasan3:ppc64el (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Preparing to unpack .../6-libubsan0_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking libubsan0:ppc64el (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Preparing to unpack .../7-gcc-6-base_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking gcc-6-base:ppc64el (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Setting up gcc-6-base:ppc64el (6.2.0-10ubuntu1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13952 files and directories currently installed.) Preparing to unpack .../libstdc++6_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking libstdc++6:ppc64el (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Setting up libstdc++6:ppc64el (6.2.0-10ubuntu1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13952 files and directories currently installed.) Preparing to unpack .../0-g++-6_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking g++-6 (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Preparing to unpack .../1-libstdc++-6-dev_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking libstdc++-6-dev:ppc64el (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Preparing to unpack .../2-libgcc-6-dev_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking libgcc-6-dev:ppc64el (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Preparing to unpack .../3-gcc-6_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking gcc-6 (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Preparing to unpack .../4-cpp-6_6.2.0-10ubuntu1_ppc64el.deb ... Unpacking cpp-6 (6.2.0-10ubuntu1) over (6.2.0-5ubuntu12) ... Preparing to unpack .../5-libgcc1_1%3a6.2.0-10ubuntu1_ppc64el.deb ... Unpacking libgcc1:ppc64el (1:6.2.0-10ubuntu1) over (1:6.2.0-5ubuntu12) ... Setting up libgcc1:ppc64el (1:6.2.0-10ubuntu1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13950 files and directories currently installed.) Preparing to unpack .../0-binutils_2.27-9ubuntu1_ppc64el.deb ... Unpacking binutils (2.27-9ubuntu1) over (2.27-8ubuntu2) ... Preparing to unpack .../1-libudev1_231-10_ppc64el.deb ... Unpacking libudev1:ppc64el (231-10) over (231-9git1) ... Setting up libudev1:ppc64el (231-10) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13950 files and directories currently installed.) Preparing to unpack .../ubuntu-keyring_2016.10.27_all.deb ... Unpacking ubuntu-keyring (2016.10.27) over (2016.09.19) ... Setting up ubuntu-keyring (2016.10.27) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13948 files and directories currently installed.) Preparing to unpack .../00-tzdata_2016h-1_all.deb ... Unpacking tzdata (2016h-1) over (2016g-1) ... Preparing to unpack .../01-libdevmapper1.02.1_2%3a1.02.133-1ubuntu1_ppc64el.deb ... Unpacking libdevmapper1.02.1:ppc64el (2:1.02.133-1ubuntu1) over (2:1.02.130-1ubuntu1) ... Preparing to unpack .../02-dmsetup_2%3a1.02.133-1ubuntu1_ppc64el.deb ... Unpacking dmsetup (2:1.02.133-1ubuntu1) over (2:1.02.130-1ubuntu1) ... Preparing to unpack .../03-libroken18-heimdal_1.7~git20160703+dfsg-1_ppc64el.deb ... Unpacking libroken18-heimdal:ppc64el (1.7~git20160703+dfsg-1) over (1.7~git20150920+dfsg-4ubuntu1) ... Preparing to unpack .../04-libasn1-8-heimdal_1.7~git20160703+dfsg-1_ppc64el.deb ... Unpacking libasn1-8-heimdal:ppc64el (1.7~git20160703+dfsg-1) over (1.7~git20150920+dfsg-4ubuntu1) ... Preparing to unpack .../05-libheimbase1-heimdal_1.7~git20160703+dfsg-1_ppc64el.deb ... Unpacking libheimbase1-heimdal:ppc64el (1.7~git20160703+dfsg-1) over (1.7~git20150920+dfsg-4ubuntu1) ... Preparing to unpack .../06-libhcrypto4-heimdal_1.7~git20160703+dfsg-1_ppc64el.deb ... Unpacking libhcrypto4-heimdal:ppc64el (1.7~git20160703+dfsg-1) over (1.7~git20150920+dfsg-4ubuntu1) ... Preparing to unpack .../07-libwind0-heimdal_1.7~git20160703+dfsg-1_ppc64el.deb ... Unpacking libwind0-heimdal:ppc64el (1.7~git20160703+dfsg-1) over (1.7~git20150920+dfsg-4ubuntu1) ... Preparing to unpack .../08-libhx509-5-heimdal_1.7~git20160703+dfsg-1_ppc64el.deb ... Unpacking libhx509-5-heimdal:ppc64el (1.7~git20160703+dfsg-1) over (1.7~git20150920+dfsg-4ubuntu1) ... Preparing to unpack .../09-libkrb5-26-heimdal_1.7~git20160703+dfsg-1_ppc64el.deb ... Unpacking libkrb5-26-heimdal:ppc64el (1.7~git20160703+dfsg-1) over (1.7~git20150920+dfsg-4ubuntu1) ... Preparing to unpack .../10-libheimntlm0-heimdal_1.7~git20160703+dfsg-1_ppc64el.deb ... Unpacking libheimntlm0-heimdal:ppc64el (1.7~git20160703+dfsg-1) over (1.7~git20150920+dfsg-4ubuntu1) ... Preparing to unpack .../11-libgssapi3-heimdal_1.7~git20160703+dfsg-1_ppc64el.deb ... Unpacking libgssapi3-heimdal:ppc64el (1.7~git20160703+dfsg-1) over (1.7~git20150920+dfsg-4ubuntu1) ... Preparing to unpack .../12-libldap-2.4-2_2.4.42+dfsg-2ubuntu5_ppc64el.deb ... Unpacking libldap-2.4-2:ppc64el (2.4.42+dfsg-2ubuntu5) over (2.4.42+dfsg-2ubuntu4) ... Preparing to unpack .../13-xz-utils_5.2.2-1.2_ppc64el.deb ... Unpacking xz-utils (5.2.2-1.2) over (5.1.1alpha+20120614-2.1ubuntu1) ... Preparing to unpack .../14-linux-libc-dev_4.8.0-27.29_ppc64el.deb ... Unpacking linux-libc-dev:ppc64el (4.8.0-27.29) over (4.8.0-22.24) ... Setting up libgomp1:ppc64el (6.2.0-10ubuntu1) ... Setting up libatomic1:ppc64el (6.2.0-10ubuntu1) ... Setting up perl-modules-5.24 (5.24.1~rc3-3) ... Setting up libperl5.24:ppc64el (5.24.1~rc3-3) ... Setting up libcc1-0:ppc64el (6.2.0-10ubuntu1) ... Setting up libasan3:ppc64el (6.2.0-10ubuntu1) ... Setting up tzdata (2016h-1) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Nov 2 04:31:59 UTC 2016. Universal Time is now: Wed Nov 2 04:31:59 UTC 2016. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up systemd-sysv (231-10) ... Setting up libubsan0:ppc64el (6.2.0-10ubuntu1) ... Setting up linux-libc-dev:ppc64el (4.8.0-27.29) ... Setting up libroken18-heimdal:ppc64el (1.7~git20160703+dfsg-1) ... Setting up libdevmapper1.02.1:ppc64el (2:1.02.133-1ubuntu1) ... Setting up perl (5.24.1~rc3-3) ... Installing new version of config file /etc/perl/sitecustomize.pl ... Processing triggers for libc-bin (2.24-3ubuntu1) ... Setting up xz-utils (5.2.2-1.2) ... Setting up libheimbase1-heimdal:ppc64el (1.7~git20160703+dfsg-1) ... Setting up dmsetup (2:1.02.133-1ubuntu1) ... Setting up binutils (2.27-9ubuntu1) ... Setting up cpp-6 (6.2.0-10ubuntu1) ... Setting up libitm1:ppc64el (6.2.0-10ubuntu1) ... Setting up libgcc-6-dev:ppc64el (6.2.0-10ubuntu1) ... Setting up libstdc++-6-dev:ppc64el (6.2.0-10ubuntu1) ... Setting up libwind0-heimdal:ppc64el (1.7~git20160703+dfsg-1) ... Setting up libasn1-8-heimdal:ppc64el (1.7~git20160703+dfsg-1) ... Setting up libhcrypto4-heimdal:ppc64el (1.7~git20160703+dfsg-1) ... Setting up libhx509-5-heimdal:ppc64el (1.7~git20160703+dfsg-1) ... Setting up gcc-6 (6.2.0-10ubuntu1) ... Setting up g++-6 (6.2.0-10ubuntu1) ... Setting up libkrb5-26-heimdal:ppc64el (1.7~git20160703+dfsg-1) ... Setting up libheimntlm0-heimdal:ppc64el (1.7~git20160703+dfsg-1) ... Setting up libgssapi3-heimdal:ppc64el (1.7~git20160703+dfsg-1) ... Setting up libldap-2.4-2:ppc64el (2.4.42+dfsg-2ubuntu5) ... Processing triggers for libc-bin (2.24-3ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-11123063', 'ppc64el', 'zesty-proposed', '-c', 'chroot:autobuild', '--arch=ppc64el', '--dist=zesty-proposed', '--purge=never', '--nolog', 'proteinortho_5.15+dfsg-1.dsc'] Initiating build PACKAGEBUILD-11123063 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-31-generic #50-Ubuntu SMP Wed Jul 13 00:05:18 UTC 2016 ppc64le sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos01-ppc64el-007.buildd +==============================================================================+ | proteinortho 5.15+dfsg-1 (ppc64el) 02 Nov 2016 04:32 | +==============================================================================+ Package: proteinortho Version: 5.15+dfsg-1 Source Version: 5.15+dfsg-1 Distribution: zesty-proposed Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el I: NOTICE: Log filtering will replace 'build/proteinortho-41jNIm/proteinortho-5.15+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/proteinortho-41jNIm' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-11123063/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- proteinortho_5.15+dfsg-1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-mKdgxg/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-mKdgxg/apt_archive ./ InRelease Get:2 copy:/<>/resolver-mKdgxg/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-mKdgxg/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-mKdgxg/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-mKdgxg/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.22 perl-modules-5.22 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 770 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-mKdgxg/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [770 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 770 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13948 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 9), ncbi-blast+ Filtered Build-Depends: debhelper (>= 9), ncbi-blast+ dpkg-deb: building package 'sbuild-build-depends-proteinortho-dummy' in '/<>/resolver-Rcmbdn/apt_archive/sbuild-build-depends-proteinortho-dummy.deb'. Ign:1 copy:/<>/resolver-Rcmbdn/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Rcmbdn/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-Rcmbdn/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Rcmbdn/apt_archive ./ Sources [221 B] Get:5 copy:/<>/resolver-Rcmbdn/apt_archive ./ Packages [542 B] Fetched 2882 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install proteinortho build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.22 perl-modules-5.22 Use 'sudo apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3 libexpat1 libfile-stripnondeterminism-perl libglib2.0-0 libicu57 libmagic1 libpipeline1 libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libsigsegv2 libtimedate-perl libtool libunistring0 libxml2 m4 man-db mime-support ncbi-blast+ ncbi-data po-debconf python python-minimal python2.7 python2.7-minimal Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk less www-browser libmail-box-perl python-doc python-tk python2.7-doc binfmt-support Recommended packages: curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev xml-core libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3 libexpat1 libfile-stripnondeterminism-perl libglib2.0-0 libicu57 libmagic1 libpipeline1 libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libsigsegv2 libtimedate-perl libtool libunistring0 libxml2 m4 man-db mime-support ncbi-blast+ ncbi-data po-debconf python python-minimal python2.7 python2.7-minimal sbuild-build-depends-proteinortho-dummy 0 upgraded, 40 newly installed, 0 to remove and 0 not upgraded. Need to get 32.8 MB of archives. After this operation, 160 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Rcmbdn/apt_archive ./ sbuild-build-depends-proteinortho-dummy 0.invalid.0 [784 B] Get:2 http://ftpmaster.internal/ubuntu zesty/main ppc64el groff-base ppc64el 1.22.3-8 [1356 kB] Get:3 http://ftpmaster.internal/ubuntu zesty/main ppc64el bsdmainutils ppc64el 9.0.6ubuntu3 [176 kB] Get:4 http://ftpmaster.internal/ubuntu zesty/main ppc64el libpipeline1 ppc64el 1.4.1-2 [24.1 kB] Get:5 http://ftpmaster.internal/ubuntu zesty/main ppc64el man-db ppc64el 2.7.5-1 [850 kB] Get:6 http://ftpmaster.internal/ubuntu zesty/main ppc64el libunistring0 ppc64el 0.9.3-5.2ubuntu1 [269 kB] Get:7 http://ftpmaster.internal/ubuntu zesty/main ppc64el libpython2.7-minimal ppc64el 2.7.12-3build1 [340 kB] Get:8 http://ftpmaster.internal/ubuntu zesty/main ppc64el python2.7-minimal ppc64el 2.7.12-3build1 [1342 kB] Get:9 http://ftpmaster.internal/ubuntu zesty/main ppc64el python-minimal ppc64el 2.7.11-2 [28.3 kB] Get:10 http://ftpmaster.internal/ubuntu zesty/main ppc64el mime-support all 3.60ubuntu1 [30.1 kB] Get:11 http://ftpmaster.internal/ubuntu zesty/main ppc64el libexpat1 ppc64el 2.2.0-1 [76.3 kB] Get:12 http://ftpmaster.internal/ubuntu zesty/main ppc64el libpython2.7-stdlib ppc64el 2.7.12-3build1 [1894 kB] Get:13 http://ftpmaster.internal/ubuntu zesty/main ppc64el python2.7 ppc64el 2.7.12-3build1 [225 kB] Get:14 http://ftpmaster.internal/ubuntu zesty/main ppc64el libpython-stdlib ppc64el 2.7.11-2 [7858 B] Get:15 http://ftpmaster.internal/ubuntu zesty/main ppc64el python ppc64el 2.7.11-2 [139 kB] Get:16 http://ftpmaster.internal/ubuntu zesty/main ppc64el libmagic1 ppc64el 1:5.28-2ubuntu1 [238 kB] Get:17 http://ftpmaster.internal/ubuntu zesty/main ppc64el file ppc64el 1:5.28-2ubuntu1 [22.5 kB] Get:18 http://ftpmaster.internal/ubuntu zesty/main ppc64el gettext-base ppc64el 0.19.8.1-1ubuntu2 [48.2 kB] Get:19 http://ftpmaster.internal/ubuntu zesty/main ppc64el libglib2.0-0 ppc64el 2.50.0-1 [1064 kB] Get:20 http://ftpmaster.internal/ubuntu zesty/main ppc64el libicu57 ppc64el 57.1-4 [7771 kB] Get:21 http://ftpmaster.internal/ubuntu zesty/main ppc64el libxml2 ppc64el 2.9.4+dfsg1-2 [609 kB] Get:22 http://ftpmaster.internal/ubuntu zesty/main ppc64el libsigsegv2 ppc64el 2.10-5 [14.2 kB] Get:23 http://ftpmaster.internal/ubuntu zesty/main ppc64el m4 ppc64el 1.4.17-5 [198 kB] Get:24 http://ftpmaster.internal/ubuntu zesty/main ppc64el autoconf all 2.69-10 [321 kB] Get:25 http://ftpmaster.internal/ubuntu zesty/main ppc64el autotools-dev all 20160430.1 [39.6 kB] Get:26 http://ftpmaster.internal/ubuntu zesty/main ppc64el automake all 1:1.15-4ubuntu1 [510 kB] Get:27 http://ftpmaster.internal/ubuntu zesty/main ppc64el autopoint all 0.19.8.1-1ubuntu2 [412 kB] Get:28 http://ftpmaster.internal/ubuntu zesty/main ppc64el libtool all 2.4.6-1 [194 kB] Get:29 http://ftpmaster.internal/ubuntu zesty/main ppc64el dh-autoreconf all 12 [15.8 kB] Get:30 http://ftpmaster.internal/ubuntu zesty/main ppc64el libarchive-zip-perl all 1.59-1 [84.0 kB] Get:31 http://ftpmaster.internal/ubuntu zesty/main ppc64el libfile-stripnondeterminism-perl all 0.028-1 [12.5 kB] Get:32 http://ftpmaster.internal/ubuntu zesty/main ppc64el libtimedate-perl all 2.3000-2 [37.5 kB] Get:33 http://ftpmaster.internal/ubuntu zesty/main ppc64el dh-strip-nondeterminism all 0.028-1 [4820 B] Get:34 http://ftpmaster.internal/ubuntu zesty/main ppc64el libcroco3 ppc64el 0.6.11-1 [75.6 kB] Get:35 http://ftpmaster.internal/ubuntu zesty/main ppc64el gettext ppc64el 0.19.8.1-1ubuntu2 [1114 kB] Get:36 http://ftpmaster.internal/ubuntu zesty/main ppc64el intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:37 http://ftpmaster.internal/ubuntu zesty/main ppc64el po-debconf all 1.0.19 [234 kB] Get:38 http://ftpmaster.internal/ubuntu zesty/main ppc64el debhelper all 10.2.2ubuntu1 [742 kB] Get:39 http://ftpmaster.internal/ubuntu zesty/universe ppc64el ncbi-data all 6.1.20120620-11 [3261 kB] Get:40 http://ftpmaster.internal/ubuntu zesty/universe ppc64el ncbi-blast+ ppc64el 2.4.0-3 [9039 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 32.8 MB in 4s (7005 kB/s) Selecting previously unselected package groff-base. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13948 files and directories currently installed.) Preparing to unpack .../00-groff-base_1.22.3-8_ppc64el.deb ... Unpacking groff-base (1.22.3-8) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_9.0.6ubuntu3_ppc64el.deb ... Unpacking bsdmainutils (9.0.6ubuntu3) ... Selecting previously unselected package libpipeline1:ppc64el. Preparing to unpack .../02-libpipeline1_1.4.1-2_ppc64el.deb ... Unpacking libpipeline1:ppc64el (1.4.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../03-man-db_2.7.5-1_ppc64el.deb ... Unpacking man-db (2.7.5-1) ... Selecting previously unselected package libunistring0:ppc64el. Preparing to unpack .../04-libunistring0_0.9.3-5.2ubuntu1_ppc64el.deb ... Unpacking libunistring0:ppc64el (0.9.3-5.2ubuntu1) ... Selecting previously unselected package libpython2.7-minimal:ppc64el. Preparing to unpack .../05-libpython2.7-minimal_2.7.12-3build1_ppc64el.deb ... Unpacking libpython2.7-minimal:ppc64el (2.7.12-3build1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../06-python2.7-minimal_2.7.12-3build1_ppc64el.deb ... Unpacking python2.7-minimal (2.7.12-3build1) ... Selecting previously unselected package python-minimal. Preparing to unpack .../07-python-minimal_2.7.11-2_ppc64el.deb ... Unpacking python-minimal (2.7.11-2) ... Selecting previously unselected package mime-support. Preparing to unpack .../08-mime-support_3.60ubuntu1_all.deb ... Unpacking mime-support (3.60ubuntu1) ... Selecting previously unselected package libexpat1:ppc64el. Preparing to unpack .../09-libexpat1_2.2.0-1_ppc64el.deb ... Unpacking libexpat1:ppc64el (2.2.0-1) ... Selecting previously unselected package libpython2.7-stdlib:ppc64el. Preparing to unpack .../10-libpython2.7-stdlib_2.7.12-3build1_ppc64el.deb ... Unpacking libpython2.7-stdlib:ppc64el (2.7.12-3build1) ... Selecting previously unselected package python2.7. Preparing to unpack .../11-python2.7_2.7.12-3build1_ppc64el.deb ... Unpacking python2.7 (2.7.12-3build1) ... Selecting previously unselected package libpython-stdlib:ppc64el. Preparing to unpack .../12-libpython-stdlib_2.7.11-2_ppc64el.deb ... Unpacking libpython-stdlib:ppc64el (2.7.11-2) ... Setting up libpython2.7-minimal:ppc64el (2.7.12-3build1) ... Setting up python2.7-minimal (2.7.12-3build1) ... Setting up python-minimal (2.7.11-2) ... Selecting previously unselected package python. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15224 files and directories currently installed.) Preparing to unpack .../00-python_2.7.11-2_ppc64el.deb ... Unpacking python (2.7.11-2) ... Selecting previously unselected package libmagic1:ppc64el. Preparing to unpack .../01-libmagic1_1%3a5.28-2ubuntu1_ppc64el.deb ... Unpacking libmagic1:ppc64el (1:5.28-2ubuntu1) ... Selecting previously unselected package file. Preparing to unpack .../02-file_1%3a5.28-2ubuntu1_ppc64el.deb ... Unpacking file (1:5.28-2ubuntu1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../03-gettext-base_0.19.8.1-1ubuntu2_ppc64el.deb ... Unpacking gettext-base (0.19.8.1-1ubuntu2) ... Selecting previously unselected package libglib2.0-0:ppc64el. Preparing to unpack .../04-libglib2.0-0_2.50.0-1_ppc64el.deb ... Unpacking libglib2.0-0:ppc64el (2.50.0-1) ... Selecting previously unselected package libicu57:ppc64el. Preparing to unpack .../05-libicu57_57.1-4_ppc64el.deb ... Unpacking libicu57:ppc64el (57.1-4) ... Selecting previously unselected package libxml2:ppc64el. Preparing to unpack .../06-libxml2_2.9.4+dfsg1-2_ppc64el.deb ... Unpacking libxml2:ppc64el (2.9.4+dfsg1-2) ... Selecting previously unselected package libsigsegv2:ppc64el. Preparing to unpack .../07-libsigsegv2_2.10-5_ppc64el.deb ... Unpacking libsigsegv2:ppc64el (2.10-5) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.17-5_ppc64el.deb ... Unpacking m4 (1.4.17-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-10_all.deb ... Unpacking autoconf (2.69-10) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20160430.1_all.deb ... Unpacking autotools-dev (20160430.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.15-4ubuntu1_all.deb ... Unpacking automake (1:1.15-4ubuntu1) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-1ubuntu2_all.deb ... Unpacking autopoint (0.19.8.1-1ubuntu2) ... Selecting previously unselected package libtool. Preparing to unpack .../13-libtool_2.4.6-1_all.deb ... Unpacking libtool (2.4.6-1) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../14-dh-autoreconf_12_all.deb ... Unpacking dh-autoreconf (12) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../15-libarchive-zip-perl_1.59-1_all.deb ... Unpacking libarchive-zip-perl (1.59-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../16-libfile-stripnondeterminism-perl_0.028-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (0.028-1) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../17-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../18-dh-strip-nondeterminism_0.028-1_all.deb ... Unpacking dh-strip-nondeterminism (0.028-1) ... Selecting previously unselected package libcroco3:ppc64el. Preparing to unpack .../19-libcroco3_0.6.11-1_ppc64el.deb ... Unpacking libcroco3:ppc64el (0.6.11-1) ... Selecting previously unselected package gettext. Preparing to unpack .../20-gettext_0.19.8.1-1ubuntu2_ppc64el.deb ... Unpacking gettext (0.19.8.1-1ubuntu2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../21-intltool-debian_0.35.0+20060710.4_all.deb ... Unpacking intltool-debian (0.35.0+20060710.4) ... Selecting previously unselected package po-debconf. Preparing to unpack .../22-po-debconf_1.0.19_all.deb ... Unpacking po-debconf (1.0.19) ... Selecting previously unselected package debhelper. Preparing to unpack .../23-debhelper_10.2.2ubuntu1_all.deb ... Unpacking debhelper (10.2.2ubuntu1) ... Selecting previously unselected package ncbi-data. Preparing to unpack .../24-ncbi-data_6.1.20120620-11_all.deb ... Unpacking ncbi-data (6.1.20120620-11) ... Selecting previously unselected package ncbi-blast+. Preparing to unpack .../25-ncbi-blast+_2.4.0-3_ppc64el.deb ... Unpacking ncbi-blast+ (2.4.0-3) ... Selecting previously unselected package sbuild-build-depends-proteinortho-dummy. Preparing to unpack .../26-sbuild-build-depends-proteinortho-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-proteinortho-dummy (0.invalid.0) ... Setting up libexpat1:ppc64el (2.2.0-1) ... Setting up libarchive-zip-perl (1.59-1) ... Setting up mime-support (3.60ubuntu1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsigsegv2:ppc64el (2.10-5) ... Setting up groff-base (1.22.3-8) ... Setting up libglib2.0-0:ppc64el (2.50.0-1) ... No schema files found: doing nothing. Setting up gettext-base (0.19.8.1-1ubuntu2) ... Setting up libpipeline1:ppc64el (1.4.1-2) ... Setting up m4 (1.4.17-5) ... Setting up libicu57:ppc64el (57.1-4) ... Setting up libxml2:ppc64el (2.9.4+dfsg1-2) ... Setting up libmagic1:ppc64el (1:5.28-2ubuntu1) ... Setting up libcroco3:ppc64el (0.6.11-1) ... Setting up ncbi-data (6.1.20120620-11) ... Processing triggers for libc-bin (2.24-3ubuntu1) ... Setting up autotools-dev (20160430.1) ... Setting up libunistring0:ppc64el (0.9.3-5.2ubuntu1) ... Setting up bsdmainutils (9.0.6ubuntu3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libpython2.7-stdlib:ppc64el (2.7.12-3build1) ... Setting up autopoint (0.19.8.1-1ubuntu2) ... Setting up libfile-stripnondeterminism-perl (0.028-1) ... Setting up gettext (0.19.8.1-1ubuntu2) ... Setting up python2.7 (2.7.12-3build1) ... Setting up autoconf (2.69-10) ... Setting up file (1:5.28-2ubuntu1) ... Setting up libpython-stdlib:ppc64el (2.7.11-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.15-4ubuntu1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.7.5-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python (2.7.11-2) ... Setting up libtool (2.4.6-1) ... Setting up po-debconf (1.0.19) ... Setting up ncbi-blast+ (2.4.0-3) ... Setting up dh-autoreconf (12) ... Setting up dh-strip-nondeterminism (0.028-1) ... Setting up debhelper (10.2.2ubuntu1) ... Setting up sbuild-build-depends-proteinortho-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.24-3ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-31-generic ppc64el (ppc64le) Toolchain package versions: binutils_2.27-9ubuntu1 dpkg-dev_1.18.10ubuntu1 g++-6_6.2.0-10ubuntu1 gcc-6_6.2.0-10ubuntu1 libc6-dev_2.24-3ubuntu1 libstdc++-6-dev_6.2.0-10ubuntu1 libstdc++6_6.2.0-10ubuntu1 linux-libc-dev_4.8.0-27.29 Package versions: adduser_3.113+nmu3ubuntu5 advancecomp_1.20-1 apt_1.3.1 apt-transport-https_1.3.1 autoconf_2.69-10 automake_1:1.15-4ubuntu1 autopoint_0.19.8.1-1ubuntu2 autotools-dev_20160430.1 base-files_9.6ubuntu6 base-passwd_3.5.40 bash_4.3-15ubuntu1 binutils_2.27-9ubuntu1 bsdmainutils_9.0.6ubuntu3 bsdutils_1:2.28.2-1ubuntu1 build-essential_12.1ubuntu2 bzip2_1.0.6-8build1 ca-certificates_20160104ubuntu1 coreutils_8.25-2ubuntu2 cpp_4:6.1.1-1ubuntu2 cpp-6_6.2.0-10ubuntu1 dash_0.5.8-2.3ubuntu1 debconf_1.5.59ubuntu1 debhelper_10.2.2ubuntu1 debianutils_4.8 dh-autoreconf_12 dh-strip-nondeterminism_0.028-1 diffutils_1:3.3-3 dmsetup_2:1.02.133-1ubuntu1 dpkg_1.18.10ubuntu1 dpkg-dev_1.18.10ubuntu1 e2fslibs_1.43.3-1 e2fsprogs_1.43.3-1 fakeroot_1.21-1ubuntu2 file_1:5.28-2ubuntu1 findutils_4.6.0+git+20160703-2 g++_4:6.1.1-1ubuntu2 g++-6_6.2.0-10ubuntu1 gcc_4:6.1.1-1ubuntu2 gcc-6_6.2.0-10ubuntu1 gcc-6-base_6.2.0-10ubuntu1 gettext_0.19.8.1-1ubuntu2 gettext-base_0.19.8.1-1ubuntu2 gnupg_2.1.15-1ubuntu6 gnupg-agent_2.1.15-1ubuntu6 gpgv_2.1.15-1ubuntu6 grep_2.25-6 groff-base_1.22.3-8 gzip_1.6-4ubuntu1 hostname_3.18 init_1.45 init-system-helpers_1.45 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3 libapparmor1_2.10.95-4ubuntu5.2 libapt-pkg5.0_1.3.1 libarchive-zip-perl_1.59-1 libasan3_6.2.0-10ubuntu1 libasn1-8-heimdal_1.7~git20160703+dfsg-1 libassuan0_2.4.3-1 libatomic1_6.2.0-10ubuntu1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.6-1ubuntu1 libaudit1_1:2.6.6-1ubuntu1 libblkid1_2.28.2-1ubuntu1 libbz2-1.0_1.0.6-8build1 libc-bin_2.24-3ubuntu1 libc-dev-bin_2.24-3ubuntu1 libc6_2.24-3ubuntu1 libc6-dev_2.24-3ubuntu1 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_6.2.0-10ubuntu1 libcomerr2_1.43.3-1 libcroco3_0.6.11-1 libcryptsetup4_2:1.7.2-0ubuntu1 libcurl3-gnutls_7.50.1-1ubuntu1 libdb5.3_5.3.28-12 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.133-1ubuntu1 libdpkg-perl_1.18.10ubuntu1 libexpat1_2.2.0-1 libfakeroot_1.21-1ubuntu2 libfdisk1_2.28.2-1ubuntu1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.028-1 libgcc-6-dev_6.2.0-10ubuntu1 libgcc1_1:6.2.0-10ubuntu1 libgcrypt20_1.7.2-2ubuntu1 libgdbm3_1.8.3-14 libglib2.0-0_2.50.0-1 libgmp10_2:6.1.1+dfsg-1 libgnutls30_3.5.3-5ubuntu1 libgomp1_6.2.0-10ubuntu1 libgpg-error0_1.24-1 libgssapi-krb5-2_1.14.3+dfsg-2 libgssapi3-heimdal_1.7~git20160703+dfsg-1 libhcrypto4-heimdal_1.7~git20160703+dfsg-1 libheimbase1-heimdal_1.7~git20160703+dfsg-1 libheimntlm0-heimdal_1.7~git20160703+dfsg-1 libhogweed4_3.2-1 libhx509-5-heimdal_1.7~git20160703+dfsg-1 libicu57_57.1-4 libidn11_1.33-1 libip4tc0_1.6.0-3ubuntu2 libisl15_0.17.1-1 libitm1_6.2.0-10ubuntu1 libk5crypto3_1.14.3+dfsg-2 libkeyutils1_1.5.9-9ubuntu1 libkmod2_22-1.1ubuntu1 libkrb5-26-heimdal_1.7~git20160703+dfsg-1 libkrb5-3_1.14.3+dfsg-2 libkrb5support0_1.14.3+dfsg-2 libksba8_1.3.4-4 libldap-2.4-2_2.4.42+dfsg-2ubuntu5 liblockfile-bin_1.09-6ubuntu1 liblockfile1_1.09-6ubuntu1 liblz4-1_0.0~r131-2ubuntu2 liblzma5_5.2.2-1.2 libmagic1_1:5.28-2ubuntu1 libmount1_2.28.2-1ubuntu1 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20160625-1ubuntu1 libncursesw5_6.0+20160625-1ubuntu1 libnettle6_3.2-1 libnpth0_1.2-3 libp11-kit0_0.23.2-5 libpam-modules_1.1.8-3.2ubuntu2 libpam-modules-bin_1.1.8-3.2ubuntu2 libpam-runtime_1.1.8-3.2ubuntu2 libpam0g_1.1.8-3.2ubuntu2 libpcre3_2:8.39-2 libperl5.22_5.22.2-3 libperl5.24_5.24.1~rc3-3 libpipeline1_1.4.1-2 libpng16-16_1.6.25-1 libprocps6_2:3.3.12-1ubuntu2 libpython-stdlib_2.7.11-2 libpython2.7-minimal_2.7.12-3build1 libpython2.7-stdlib_2.7.12-3build1 libreadline7_7.0-0ubuntu2 libroken18-heimdal_1.7~git20160703+dfsg-1 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.26.dfsg1-15 libsasl2-modules-db_2.1.26.dfsg1-15 libseccomp2_2.3.1-2ubuntu2 libselinux1_2.5-3 libsemanage-common_2.5-1 libsemanage1_2.5-1 libsepol1_2.5-1 libsigsegv2_2.10-5 libslang2_2.3.0-2.3ubuntu1 libsmartcols1_2.28.2-1ubuntu1 libsqlite3-0_3.14.1-1build1 libss2_1.43.3-1 libssl1.0.0_1.0.2g-1ubuntu9 libstdc++-6-dev_6.2.0-10ubuntu1 libstdc++6_6.2.0-10ubuntu1 libsystemd0_231-10 libtasn1-6_4.9-4 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1ubuntu1 libtool_2.4.6-1 libubsan0_6.2.0-10ubuntu1 libudev1_231-10 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-30 libustr-1.0-1_1.0.4-5 libuuid1_2.28.2-1ubuntu1 libwind0-heimdal_1.7~git20160703+dfsg-1 libxml2_2.9.4+dfsg1-2 linux-libc-dev_4.8.0-27.29 lockfile-progs_0.1.17 login_1:4.2-3.2ubuntu1 lsb-base_9.20160110ubuntu5 m4_1.4.17-5 make_4.1-9 man-db_2.7.5-1 mawk_1.3.3-17ubuntu2 mime-support_3.60ubuntu1 mount_2.28.2-1ubuntu1 multiarch-support_2.24-3ubuntu1 ncbi-blast+_2.4.0-3 ncbi-data_6.1.20120620-11 ncurses-base_6.0+20160625-1ubuntu1 ncurses-bin_6.0+20160625-1ubuntu1 openssl_1.0.2g-1ubuntu9 optipng_0.7.6-1build1 passwd_1:4.2-3.2ubuntu1 patch_2.7.5-1 perl_5.24.1~rc3-3 perl-base_5.24.1~rc3-3 perl-modules-5.22_5.22.2-3 perl-modules-5.24_5.24.1~rc3-3 pinentry-curses_0.9.7-5 pkg-create-dbgsym_0.72 pkgbinarymangler_131 po-debconf_1.0.19 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-1ubuntu2 python_2.7.11-2 python-minimal_2.7.11-2 python2.7_2.7.12-3build1 python2.7-minimal_2.7.12-3build1 readline-common_7.0-0ubuntu2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-proteinortho-dummy_0.invalid.0 sed_4.2.2-8 sensible-utils_0.0.9 systemd_231-10 systemd-sysv_231-10 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.8git1 tar_1.29b-1 tzdata_2016h-1 ubuntu-keyring_2016.10.27 util-linux_2.28.2-1ubuntu1 xz-utils_5.2.2-1.2 zlib1g_1:1.2.8.dfsg-2ubuntu5 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Aug 29 13:14:07 2016 UTC gpgv: using RSA key gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./proteinortho_5.15+dfsg-1.dsc dpkg-source: info: extracting proteinortho in proteinortho-5.15+dfsg dpkg-source: info: unpacking proteinortho_5.15+dfsg.orig.tar.xz dpkg-source: info: unpacking proteinortho_5.15+dfsg-1.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/home/buildd LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd MAIL=/var/mail/buildd OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games PWD=/<>/proteinortho-5.15+dfsg SHELL=/bin/sh SUDO_COMMAND=/usr/sbin/chroot /<> su buildd -s /bin/sh -c cd '/<>/proteinortho-5.15+dfsg' && 'env' SUDO_GID=2501 SUDO_UID=2001 SUDO_USER=buildd TERM=unknown USER=buildd USERNAME=root dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package proteinortho dpkg-buildpackage: info: source version 5.15+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build proteinortho-5.15+dfsg dpkg-buildpackage: info: host architecture ppc64el fakeroot debian/rules clean dh clean dh_testdir dh_auto_clean dh_clean debian/rules build-arch dh build-arch dh_testdir -a dh_update_autotools_config -a dh_auto_configure -a dh_auto_build -a make -j1 make[1]: Entering directory '/<>/proteinortho-5.15+dfsg' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -Wno-unused-result -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o proteinortho5_clustering proteinortho5_clustering.cpp g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -Wno-unused-result -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o proteinortho5_tree po_tree.c make[1]: Leaving directory '/<>/proteinortho-5.15+dfsg' dh_auto_test -a make -j1 test make[1]: Entering directory '/<>/proteinortho-5.15+dfsg' ./proteinortho5.pl -project=test -synteny -singles test/*.faa ***************************************************************** Proteinortho with PoFF version 5.15 - An orthology detection tool ***************************************************************** Detected 4 available CPU threads, Detected NCBI BLAST version 2.4.0+ Checking input files test/C.faa 308 genes test/E.faa 310 genes test/L.faa 41 genes test/M.faa 40 genes **Step 1** Generating indices Building database for 'test/E.faa' (310 sequences) Building database for 'test/C.faa' (308 sequences) Building database for 'test/L.faa' (41 sequences) Building database for 'test/M.faa' (40 sequences) **Step 2** Running blast analysis: 0% (0/6) Running blast analysis: 16.66% (1/6) Running blast analysis: 33.33% (2/6) Running blast analysis: 100% (6/6) Running blast analysis: 66.66% (4/6) Running blast analysis: 83.33% (5/6) Running blast analysis: 50% (3/6) Running blast analysis: 100% (6/6) -> Output written to test.blast-graph **Step 3** Clustering by similarity (Proteinortho mode) Reading test.blast-graph 4 species 150 paired proteins 218 bidirectional edges Clustering: 1.33% Clustering: 2.67% Clustering: 4.00% Clustering: 5.33% Clustering: 6.67% Clustering: 8.00% Clustering: 9.33% Clustering: 10.67% Clustering: 14.00% Clustering: 15.33% Clustering: 16.67% Clustering: 18.67% Clustering: 20.67% Clustering: 22.00% Clustering: 23.33% Clustering: 26.00% Clustering: 27.33% Clustering: 28.00% Clustering: 28.67% Clustering: 30.00% Clustering: 31.33% Clustering: 32.67% Clustering: 47.33% Clustering: 50.67% Clustering: 52.00% Clustering: 53.33% Clustering: 54.67% Clustering: 56.00% Clustering: 57.33% Clustering: 58.67% Clustering: 60.00% Clustering: 62.67% Clustering: 65.33% Clustering: 68.00% Clustering: 79.33% Clustering: 100.00% Done Adding singles... -> Output written to test.proteinortho Writing graph... Cleaning edge list... Removed 27 / 218 edges Done. -> Output written to test.proteinortho-graph Clustering by gene-order (POFF mode) Reading test.ffadj-graph 4 species 130 paired proteins 155 bidirectional edges Clustering: 1.54% Clustering: 3.08% Clustering: 4.62% Clustering: 6.15% Clustering: 7.69% Clustering: 9.23% Clustering: 10.77% Clustering: 12.31% Clustering: 13.85% Clustering: 15.38% Clustering: 16.92% Clustering: 18.46% Clustering: 19.23% Clustering: 20.00% Clustering: 21.54% Clustering: 23.08% Clustering: 24.62% Clustering: 26.15% Clustering: 27.69% Clustering: 28.46% Clustering: 29.23% Clustering: 47.69% Clustering: 49.23% Clustering: 50.77% Clustering: 52.31% Clustering: 53.85% Clustering: 55.38% Clustering: 57.69% Clustering: 59.23% Clustering: 60.77% Clustering: 62.31% Clustering: 64.62% Clustering: 66.15% Clustering: 67.69% Clustering: 69.23% Clustering: 70.77% Clustering: 72.31% Clustering: 84.62% Clustering: 87.69% Clustering: 100.00% Done Adding singles... -> Output written to test.poff Writing graph... Cleaning edge list... Removed 4 / 155 edges Done. -> Output written to test.poff-graph All finished. Test okay make[1]: Leaving directory '/<>/proteinortho-5.15+dfsg' fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>/proteinortho-5.15+dfsg' dh_auto_install --buildsystem=makefile -- install INSTALLDIR=/<>/proteinortho-5.15+dfsg/debian/proteinortho/usr/lib/proteinortho make -j1 install DESTDIR=/<>/proteinortho-5.15\+dfsg/debian/proteinortho AM_UPDATE_INFO_DIR=no install INSTALLDIR=/<>/proteinortho-5.15\+dfsg/debian/proteinortho/usr/lib/proteinortho make[2]: Entering directory '/<>/proteinortho-5.15+dfsg' install -v proteinortho5.pl proteinortho5_clustering proteinortho5_singletons.pl proteinortho5_clean_edges2.pl ffadj_mcs.py po2tree.pl proteinortho5_tree /<>/proteinortho-5.15+dfsg/debian/proteinortho/usr/lib/proteinortho 'proteinortho5.pl' -> '/<>/proteinortho-5.15+dfsg/debian/proteinortho/usr/lib/proteinortho/proteinortho5.pl' 'proteinortho5_clustering' -> '/<>/proteinortho-5.15+dfsg/debian/proteinortho/usr/lib/proteinortho/proteinortho5_clustering' 'proteinortho5_singletons.pl' -> '/<>/proteinortho-5.15+dfsg/debian/proteinortho/usr/lib/proteinortho/proteinortho5_singletons.pl' 'proteinortho5_clean_edges2.pl' -> '/<>/proteinortho-5.15+dfsg/debian/proteinortho/usr/lib/proteinortho/proteinortho5_clean_edges2.pl' 'ffadj_mcs.py' -> '/<>/proteinortho-5.15+dfsg/debian/proteinortho/usr/lib/proteinortho/ffadj_mcs.py' 'po2tree.pl' -> '/<>/proteinortho-5.15+dfsg/debian/proteinortho/usr/lib/proteinortho/po2tree.pl' 'proteinortho5_tree' -> '/<>/proteinortho-5.15+dfsg/debian/proteinortho/usr/lib/proteinortho/proteinortho5_tree' make[2]: 'install' is up to date. make[2]: Leaving directory '/<>/proteinortho-5.15+dfsg' make[1]: Leaving directory '/<>/proteinortho-5.15+dfsg' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_strip -a dh_strip debug symbol extraction: enabling -a due to Build-Debug-Symbols: yes in /CurrentlyBuilding dh_strip debug symbol extraction: all non-arch-all packages for this build platform ppc64el: proteinortho dh_strip debug symbol extraction: packages to act on: proteinortho dh_strip debug symbol extraction: ignored packages: Using buildid for compat level >= 9 proteinortho has no unstripped objects, ignoring find: ‘/<>/proteinortho-5.15+dfsg/debian/proteinortho-dbgsym’: No such file or directory /usr/bin/pkg_create_dbgsym: nothing in /<>/proteinortho-5.15+dfsg/debian/proteinortho-dbgsym and no dbgdepends, ignoring dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package proteinortho: unused substitution variable ${perl:Depends} dh_gencontrol debug symbol wrapper: all non-arch-all packages for this build platform ppc64el: proteinortho dh_gencontrol debug symbol wrapper: packages to act on: proteinortho dh_gencontrol debug symbol wrapper: ignored packages: dh_gencontrol debug symbol wrapper: no debian/proteinortho-dbgsym, skipping package proteinortho dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 131 pkgstriptranslations: processing proteinortho (in debian/proteinortho); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/proteinortho/DEBIAN/control, package proteinortho, directory debian/proteinortho pkgstripfiles: Running PNG optimization (using 4 cpus) for package proteinortho ... pkgstripfiles: No PNG files. dpkg-deb: building package 'proteinortho' in '../proteinortho_5.15+dfsg-1_ppc64el.deb'. dpkg-genchanges --build=any -mLaunchpad Build Daemon >../proteinortho_5.15+dfsg-1_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build proteinortho-5.15+dfsg dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20161102-0432 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ proteinortho_5.15+dfsg-1_ppc64el.changes: ----------------------------------------- Format: 1.8 Date: Mon, 29 Aug 2016 15:10:00 +0200 Source: proteinortho Binary: proteinortho Architecture: ppc64el Version: 5.15+dfsg-1 Distribution: zesty-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: proteinortho - Detection of (Co-)orthologs in large-scale protein analysis Changes: proteinortho (5.15+dfsg-1) unstable; urgency=medium . * New upstream version Checksums-Sha1: d11f1509d5ea6cfe44fadedb6991110165b484ae 252318 proteinortho_5.15+dfsg-1_ppc64el.deb Checksums-Sha256: 4cec4381b22220e8990234f7930f41ef70258a35afd9ecd92b88f341f7dab302 252318 proteinortho_5.15+dfsg-1_ppc64el.deb Files: b63f98838e84ce6d467fb169c7e8a929 252318 science optional proteinortho_5.15+dfsg-1_ppc64el.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ proteinortho_5.15+dfsg-1_ppc64el.deb ------------------------------------ new debian package, version 2.0. size 252318 bytes: control archive=1522 bytes. 994 bytes, 18 lines control 1827 bytes, 24 lines md5sums Package: proteinortho Version: 5.15+dfsg-1 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 503 Depends: libc6 (>= 2.17), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), ncbi-blast+, python Section: science Priority: optional Homepage: https://www.bioinf.uni-leipzig.de/Software/proteinortho/ Description: Detection of (Co-)orthologs in large-scale protein analysis Proteinortho is a stand-alone tool that is geared towards large datasets and makes use of distributed computing techniques when run on multi-core hardware. It implements an extended version of the reciprocal best alignment heuristic. Proteinortho was applied to compute orthologous proteins in the complete set of all 717 eubacterial genomes available at NCBI at the beginning of 2009. Authors succeeded identifying thirty proteins present in 99% of all bacterial proteomes. drwxr-xr-x root/root 0 2016-08-29 13:10 ./ drwxr-xr-x root/root 0 2016-08-29 13:10 ./usr/ drwxr-xr-x root/root 0 2016-08-29 13:10 ./usr/bin/ -rwxr-xr-x root/root 52 2016-08-29 13:10 ./usr/bin/proteinortho5 drwxr-xr-x root/root 0 2016-08-29 13:10 ./usr/lib/ drwxr-xr-x root/root 0 2016-08-29 13:10 ./usr/lib/proteinortho/ -rwxr-xr-x root/root 35339 2016-08-29 13:10 ./usr/lib/proteinortho/ffadj_mcs.py -rwxr-xr-x root/root 4888 2016-08-29 13:10 ./usr/lib/proteinortho/po2tree.pl -rwxr-xr-x root/root 37527 2016-08-29 13:10 ./usr/lib/proteinortho/proteinortho5.pl -rwxr-xr-x root/root 1077 2016-08-29 13:10 ./usr/lib/proteinortho/proteinortho5_clean_edges2.pl -rwxr-xr-x root/root 133176 2016-08-29 13:10 ./usr/lib/proteinortho/proteinortho5_clustering -rwxr-xr-x root/root 1616 2016-08-29 13:10 ./usr/lib/proteinortho/proteinortho5_singletons.pl -rwxr-xr-x root/root 67528 2016-08-29 13:10 ./usr/lib/proteinortho/proteinortho5_tree drwxr-xr-x root/root 0 2016-08-29 13:10 ./usr/share/ drwxr-xr-x root/root 0 2016-08-29 13:10 ./usr/share/doc/ drwxr-xr-x root/root 0 2016-08-29 13:10 ./usr/share/doc/proteinortho/ -rw-r--r-- root/root 263 2016-08-29 13:10 ./usr/share/doc/proteinortho/README.test -rw-r--r-- root/root 381 2016-08-29 13:10 ./usr/share/doc/proteinortho/changelog.Debian.gz -rw-r--r-- root/root 1177 2016-08-29 13:10 ./usr/share/doc/proteinortho/copyright drwxr-xr-x root/root 0 2016-08-29 13:10 ./usr/share/doc/proteinortho/examples/ -rw-r--r-- root/root 77324 2014-07-26 13:44 ./usr/share/doc/proteinortho/examples/C.faa.gz -rw-r--r-- root/root 1867 2014-07-26 13:44 ./usr/share/doc/proteinortho/examples/C.gff.gz -rw-r--r-- root/root 84291 2014-07-26 13:44 ./usr/share/doc/proteinortho/examples/E.faa.gz -rw-r--r-- root/root 1880 2014-07-26 13:44 ./usr/share/doc/proteinortho/examples/E.gff.gz -rw-r--r-- root/root 14428 2014-07-26 13:44 ./usr/share/doc/proteinortho/examples/L.faa.gz -rw-r--r-- root/root 2376 2014-07-26 13:44 ./usr/share/doc/proteinortho/examples/L.gff -rw-r--r-- root/root 14230 2014-07-26 13:44 ./usr/share/doc/proteinortho/examples/M.faa.gz -rw-r--r-- root/root 2317 2014-07-26 13:44 ./usr/share/doc/proteinortho/examples/M.gff -rwxr-xr-x root/root 238 2016-04-22 08:52 ./usr/share/doc/proteinortho/examples/chk_test.pl -rw-r--r-- root/root 393 2016-08-29 13:10 ./usr/share/doc/proteinortho/run-unit-test drwxr-xr-x root/root 0 2016-08-29 13:10 ./usr/share/doc/proteinortho/tools/ -rw-r--r-- root/root 1209 2016-04-22 08:52 ./usr/share/doc/proteinortho/tools/comp_bla.pl -rw-r--r-- root/root 2638 2016-04-22 08:52 ./usr/share/doc/proteinortho/tools/grab_proteins.pl drwxr-xr-x root/root 0 2016-08-29 13:10 ./usr/share/man/ drwxr-xr-x root/root 0 2016-08-29 13:10 ./usr/share/man/man1/ -rw-r--r-- root/root 1381 2016-08-29 13:10 ./usr/share/man/man1/proteinortho5.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Not removing build depends: as requested Keeping session: +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: ppc64el Build-Space: 2356 Build-Time: 34 Distribution: zesty-proposed Host Architecture: ppc64el Install-Time: 15 Job: proteinortho_5.15+dfsg-1.dsc Machine Architecture: ppc64el Package: proteinortho Package-Time: 49 Source-Version: 5.15+dfsg-1 Space: 2356 Status: successful Version: 5.15+dfsg-1 -------------------------------------------------------------------------------- Finished at 20161102-0432 Build needed 00:00:49, 2356k disc space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-11123063'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-11123063/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-11123063'] Unmounting chroot for build PACKAGEBUILD-11123063... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-11123063'] Removing build PACKAGEBUILD-11123063