RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '422184-1018766', '/home/buildd/filecache-default/7a582ac45ab7b9809ef2876f3264b878b9294631'] Unpacking chroot for build 422184-1018766 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '422184-1018766'] Mounting chroot for build 422184-1018766 RUN: /usr/share/launchpad-buildd/slavebin/apply-ogre-model ['apply-ogre-model', '422184-1018766', 'universe'] Attempting OGRE for universe in build-422184-1018766 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '422184-1018766'] Updating debian chroot for build 422184-1018766 Get:1 http://ftpmaster.internal hardy Release.gpg [191B] Get:2 http://ftpmaster.internal hardy Release [65.9kB] Get:3 http://sanae.ubuntu.com hardy Release.gpg [65B] Hit http://sanae.ubuntu.com hardy Release Get:4 http://ftpmaster.internal hardy/main Packages [1051kB] Get:5 http://sanae.ubuntu.com hardy/main Packages [799kB] Get:6 http://ftpmaster.internal hardy/universe Packages [3519kB] Get:7 http://sanae.ubuntu.com hardy/universe Packages [2900kB] Fetched 8336kB in 19s (422kB/s) Reading package lists... Reading package lists... Building dependency tree... The following NEW packages will be installed: cpp-4.2 g++-4.2 gcc-4.2 libgomp1 libstdc++6-4.2-dev The following packages will be upgraded: base-files base-passwd binutils bsdutils ccache cpp cpp-4.1 debconf debconf-i18n debianutils g++ g++-4.1 gcc gcc-4.1 gcc-4.1-base gcc-4.2-base grep libattr1 libc6 libc6-dev libgcc4 libslang2 libstdc++6 libstdc++6-4.1-dev login mktemp mount passwd procps sed startup-tasks system-services tzdata upstart upstart-compat-sysv upstart-logd util-linux 37 upgraded, 5 newly installed, 0 to remove and 0 not upgraded. Need to get 0B/28.9MB of archives. After unpacking 20.6MB of additional disk space will be used. (Reading database ... 9302 files and directories currently installed.) Preparing to replace debianutils 2.22.1 (using .../debianutils_2.26_hppa.deb) ... Unpacking replacement debianutils ... Setting up debianutils (2.26) ... (Reading database ... 9302 files and directories currently installed.) Preparing to replace grep 2.5.1.ds2-6build1 (using .../grep_2.5.3~dfsg-3_hppa.deb) ... Unpacking replacement grep ... Setting up grep (2.5.3~dfsg-3) ... (Reading database ... 9320 files and directories currently installed.) Preparing to replace login 1:4.0.18.1-9 (using .../login_1%3a4.0.18.1-11_hppa.deb) ... Unpacking replacement login ... Setting up login (4.0.18.1-11) ... (Reading database ... 9319 files and directories currently installed.) Preparing to replace mktemp 1.5-3 (using .../archives/mktemp_1.5-5_hppa.deb) ... Unpacking replacement mktemp ... Setting up mktemp (1.5-5) ... (Reading database ... 9319 files and directories currently installed.) Preparing to replace sed 4.1.5-2 (using .../archives/sed_4.1.5-4_hppa.deb) ... Unpacking replacement sed ... Setting up sed (4.1.5-4) ... (Reading database ... 9319 files and directories currently installed.) Preparing to replace debconf-i18n 1.5.14ubuntu1 (using .../debconf-i18n_1.5.16_all.deb) ... Unpacking replacement debconf-i18n ... Preparing to replace debconf 1.5.14ubuntu1 (using .../debconf_1.5.16_all.deb) ... Unpacking replacement debconf ... Preparing to replace tzdata 2007f-3ubuntu1 (using .../tzdata_2007h-2ubuntu1_all.deb) ... Unpacking replacement tzdata ... Setting up debconf-i18n (1.5.16) ... Setting up debconf (1.5.16) ... Installing new version of config file /etc/debconf.conf ... Setting up tzdata (2007h-2ubuntu1) ... Current default timezone: 'Etc/UTC' Local time is now: Mon Nov 5 00:11:41 UTC 2007. Universal Time is now: Mon Nov 5 00:11:41 UTC 2007. Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 9320 files and directories currently installed.) Preparing to replace util-linux 2.13-8ubuntu1 (using .../util-linux_2.13-10ubuntu1_hppa.deb) ... Unpacking replacement util-linux ... Setting up util-linux (2.13-10ubuntu1) ... (Reading database ... 9319 files and directories currently installed.) Preparing to replace libc6-dev 2.6.1-1ubuntu9 (using .../libc6-dev_2.6.1-6ubuntu2_hppa.deb) ... Unpacking replacement libc6-dev ... Preparing to replace gcc-4.2-base 4.2.1-5ubuntu4 (using .../gcc-4.2-base_4.2.2-3ubuntu3_hppa.deb) ... Unpacking replacement gcc-4.2-base ... Preparing to replace libgcc4 4.2.1-5ubuntu4 (using .../libgcc4_4.2.2-3ubuntu3_hppa.deb) ... Unpacking replacement libgcc4 ... Setting up gcc-4.2-base (4.2.2-3ubuntu3) ... Setting up libgcc4 (4.2.2-3ubuntu3) ... (Reading database ... 9319 files and directories currently installed.) Preparing to replace libstdc++6 4.2.1-5ubuntu4 (using .../libstdc++6_4.2.2-3ubuntu3_hppa.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.2.2-3ubuntu3) ... (Reading database ... 9319 files and directories currently installed.) Preparing to replace libc6 2.6.1-1ubuntu9 (using .../libc6_2.6.1-6ubuntu2_hppa.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.6.1-6ubuntu2) ... Installing new version of config file /etc/gai.conf ... (Reading database ... 9319 files and directories currently installed.) Preparing to replace base-passwd 3.5.11build1 (using .../base-passwd_3.5.13_hppa.deb) ... Unpacking replacement base-passwd ... Setting up base-passwd (3.5.13) ... (Reading database ... 9319 files and directories currently installed.) Preparing to replace base-files 4.0.0ubuntu5 (using .../base-files_4.0.1ubuntu1_hppa.deb) ... Unpacking replacement base-files ... Setting up base-files (4.0.1ubuntu1) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 9319 files and directories currently installed.) Preparing to replace bsdutils 1:2.13-8ubuntu1 (using .../bsdutils_1%3a2.13-10ubuntu1_hppa.deb) ... Unpacking replacement bsdutils ... Setting up bsdutils (2.13-10ubuntu1) ... (Reading database ... 9309 files and directories currently installed.) Preparing to replace mount 2.13-8ubuntu1 (using .../mount_2.13-10ubuntu1_hppa.deb) ... Unpacking replacement mount ... Setting up mount (2.13-10ubuntu1) ... (Reading database ... 9309 files and directories currently installed.) Preparing to replace upstart-logd 0.3.8-2 (using .../upstart-logd_0.3.9-1_hppa.deb) ... Unpacking replacement upstart-logd ... Preparing to replace upstart-compat-sysv 0.3.8-2 (using .../upstart-compat-sysv_0.3.9-1_hppa.deb) ... Unpacking replacement upstart-compat-sysv ... Preparing to replace upstart 0.3.8-2 (using .../upstart_0.3.9-1_hppa.deb) ... Unpacking replacement upstart ... Preparing to replace libslang2 2.0.7-2 (using .../libslang2_2.0.7-5_hppa.deb) ... Unpacking replacement libslang2 ... Setting up libslang2 (2.0.7-5) ... (Reading database ... 9309 files and directories currently installed.) Preparing to replace libattr1 1:2.4.32-1.1ubuntu1 (using .../libattr1_1%3a2.4.39-1_hppa.deb) ... Unpacking replacement libattr1 ... Preparing to replace passwd 1:4.0.18.1-9 (using .../passwd_1%3a4.0.18.1-11_hppa.deb) ... Unpacking replacement passwd ... Preparing to replace procps 1:3.2.7-3ubuntu5 (using .../procps_1%3a3.2.7-3ubuntu6_hppa.deb) ... Unpacking replacement procps ... Preparing to replace startup-tasks 0.3.8-2 (using .../startup-tasks_0.3.9-1_hppa.deb) ... Unpacking replacement startup-tasks ... Preparing to replace system-services 0.3.8-2 (using .../system-services_0.3.9-1_hppa.deb) ... Unpacking replacement system-services ... Preparing to replace binutils 2.18-0ubuntu3 (using .../binutils_2.18.1~cvs20071027-1ubuntu1_hppa.deb) ... Unpacking replacement binutils ... Preparing to replace ccache 2.4-9 (using .../ccache_2.4-10_hppa.deb) ... Unpacking replacement ccache ... Selecting previously deselected package cpp-4.2. Unpacking cpp-4.2 (from .../cpp-4.2_4.2.2-3ubuntu3_hppa.deb) ... Preparing to replace cpp 4:4.1.2-9ubuntu2 (using .../cpp_4%3a4.2.2-1ubuntu1_hppa.deb) ... Unpacking replacement cpp ... Preparing to replace g++-4.1 4.1.2-16ubuntu2 (using .../g++-4.1_4.1.2-17ubuntu1_hppa.deb) ... Unpacking replacement g++-4.1 ... Preparing to replace libstdc++6-4.1-dev 4.1.2-16ubuntu2 (using .../libstdc++6-4.1-dev_4.1.2-17ubuntu1_hppa.deb) ... Unpacking replacement libstdc++6-4.1-dev ... Preparing to replace gcc-4.1 4.1.2-16ubuntu2 (using .../gcc-4.1_4.1.2-17ubuntu1_hppa.deb) ... Unpacking replacement gcc-4.1 ... Preparing to replace cpp-4.1 4.1.2-16ubuntu2 (using .../cpp-4.1_4.1.2-17ubuntu1_hppa.deb) ... Unpacking replacement cpp-4.1 ... Preparing to replace gcc-4.1-base 4.1.2-16ubuntu2 (using .../gcc-4.1-base_4.1.2-17ubuntu1_hppa.deb) ... Unpacking replacement gcc-4.1-base ... Selecting previously deselected package libgomp1. Unpacking libgomp1 (from .../libgomp1_4.2.2-3ubuntu3_hppa.deb) ... Selecting previously deselected package gcc-4.2. Unpacking gcc-4.2 (from .../gcc-4.2_4.2.2-3ubuntu3_hppa.deb) ... Preparing to replace gcc 4:4.1.2-9ubuntu2 (using .../gcc_4%3a4.2.2-1ubuntu1_hppa.deb) ... Removing old gcc doc directory. Unpacking replacement gcc ... Selecting previously deselected package libstdc++6-4.2-dev. Unpacking libstdc++6-4.2-dev (from .../libstdc++6-4.2-dev_4.2.2-3ubuntu3_hppa.deb) ... Selecting previously deselected package g++-4.2. Unpacking g++-4.2 (from .../g++-4.2_4.2.2-3ubuntu3_hppa.deb) ... Preparing to replace g++ 4:4.1.2-9ubuntu2 (using .../g++_4%3a4.2.2-1ubuntu1_hppa.deb) ... Unpacking replacement g++ ... Setting up libc6-dev (2.6.1-6ubuntu2) ... Setting up upstart (0.3.9-1) ... Setting up upstart-logd (0.3.9-1) ... Setting up upstart-compat-sysv (0.3.9-1) ... Setting up libattr1 (2.4.39-1) ... Setting up passwd (4.0.18.1-11) ... Setting up procps (3.2.7-3ubuntu6) ... Installing new version of config file /etc/sysctl.conf ... Setting up startup-tasks (0.3.9-1) ... Setting up system-services (0.3.9-1) ... Setting up binutils (2.18.1~cvs20071027-1ubuntu1) ... Setting up ccache (2.4-10) ... Setting up cpp-4.2 (4.2.2-3ubuntu3) ... Setting up cpp (4.2.2-1ubuntu1) ... Setting up gcc-4.1-base (4.1.2-17ubuntu1) ... Setting up cpp-4.1 (4.1.2-17ubuntu1) ... Setting up gcc-4.1 (4.1.2-17ubuntu1) ... Setting up libgomp1 (4.2.2-3ubuntu3) ... Setting up gcc-4.2 (4.2.2-3ubuntu3) ... Setting up gcc (4.2.2-1ubuntu1) ... Setting up libstdc++6-4.2-dev (4.2.2-3ubuntu3) ... Setting up libstdc++6-4.1-dev (4.1.2-17ubuntu1) ... Setting up g++-4.1 (4.1.2-17ubuntu1) ... Setting up g++-4.2 (4.2.2-3ubuntu3) ... Setting up g++ (4.2.2-1ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '422184-1018766', '-dautobuild', '--nolog', '--batch', '--archive=ubuntu', '--comp=universe', 'pymol_1.0r2-1.dsc'] Initiating build Automatic build of pymol_1.0r2-1 on kohnen by sbuild/hppa 1.170.5 Build started at 20071105-0012 ****************************************************************************** pymol_1.0r2-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 5), dpatch, python-dev, python-numeric, glutg3-dev, libpng12-0-dev, tk8.4-dev, libfreetype6-dev, python-support (>= 0.4) Checking for already installed source dependencies... debhelper: missing dpatch: missing python-dev: missing python-numeric: missing glutg3-dev: missing libpng12-0-dev: missing tk8.4-dev: missing libfreetype6-dev: missing python-support: missing Checking for source dependency conflicts... libpng12-0-dev is a virtual package provided by: libpng12-dev Using libpng12-dev (only possibility) /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper dpatch python-dev python-numeric glutg3-dev libpng12-0-dev tk8.4-dev libfreetype6-dev python-support Reading package lists... Building dependency tree... Package libpng12-0-dev is a virtual package provided by: libpng12-dev 1.2.15~beta5-3 You should explicitly select one to install. E: Package libpng12-0-dev has no installation candidate libpng12-0-dev is a virtual package provided by: libpng12-dev Using libpng12-dev (only possibility) /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper dpatch python-dev python-numeric glutg3-dev tk8.4-dev libfreetype6-dev python-support libpng12-dev Reading package lists... Building dependency tree... The following extra packages will be installed: file freeglut3 freeglut3-dev gettext gettext-base html2text intltool-debian libbz2-1.0 libdrm2 libfreetype6 libgl1-mesa-dev libgl1-mesa-glx libglu1-mesa libglu1-mesa-dev libice-dev libice6 libmagic1 libncursesw5 libpng12-0 libpthread-stubs0 libpthread-stubs0-dev libreadline5 libsm-dev libsm6 libsqlite3-0 libssl0.9.8 libx11-6 libx11-data libx11-dev libxau-dev libxau6 libxcb-xlib0 libxcb-xlib0-dev libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxt-dev libxt6 libxxf86vm1 mesa-common-dev mime-support po-debconf python python-central python2.5 python2.5-dev readline-common tcl8.4 tcl8.4-dev tk8.4 x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev x11proto-xext-dev xlibmesa-gl-dev xtrans-dev zlib1g-dev Suggested packages: dh-make curl cvs gettext-doc python-doc python-tk python-profiler python-numeric-tutorial python-numeric-ext python-numeric-dbg python2.5-doc tclreadline tcl8.4-doc tk8.4-doc Recommended packages: patchutils libgpmg1 libmail-sendmail-perl libcompress-zlib-perl xterm x-terminal-emulator The following NEW packages will be installed: debhelper dpatch file freeglut3 freeglut3-dev gettext gettext-base glutg3-dev html2text intltool-debian libbz2-1.0 libdrm2 libfreetype6 libfreetype6-dev libgl1-mesa-dev libgl1-mesa-glx libglu1-mesa libglu1-mesa-dev libice-dev libice6 libmagic1 libncursesw5 libpng12-0 libpng12-dev libpthread-stubs0 libpthread-stubs0-dev libreadline5 libsm-dev libsm6 libsqlite3-0 libssl0.9.8 libx11-6 libx11-data libx11-dev libxau-dev libxau6 libxcb-xlib0 libxcb-xlib0-dev libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxt-dev libxt6 libxxf86vm1 mesa-common-dev mime-support po-debconf python python-central python-dev python-numeric python-support python2.5 python2.5-dev readline-common tcl8.4 tcl8.4-dev tk8.4 tk8.4-dev x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev x11proto-xext-dev xlibmesa-gl-dev xtrans-dev zlib1g-dev 0 upgraded, 72 newly installed, 0 to remove and 0 not upgraded. Need to get 21.3kB/22.7MB of archives. After unpacking 71.1MB of additional disk space will be used. Get:1 http://ftpmaster.internal hardy/main glutg3-dev 3.7-25 [21.3kB] Fetched 21.3kB in 0s (314kB/s) Selecting previously deselected package mime-support. (Reading database ... 9971 files and directories currently installed.) Unpacking mime-support (from .../mime-support_3.39-1_all.deb) ... Selecting previously deselected package libbz2-1.0. Unpacking libbz2-1.0 (from .../libbz2-1.0_1.0.4-0ubuntu2_hppa.deb) ... Selecting previously deselected package libncursesw5. Unpacking libncursesw5 (from .../libncursesw5_5.6+20070716-1ubuntu3_hppa.deb) ... Selecting previously deselected package readline-common. Unpacking readline-common (from .../readline-common_5.2-3build1_all.deb) ... Selecting previously deselected package libreadline5. Unpacking libreadline5 (from .../libreadline5_5.2-3build1_hppa.deb) ... Selecting previously deselected package libsqlite3-0. Unpacking libsqlite3-0 (from .../libsqlite3-0_3.4.2-2_hppa.deb) ... Selecting previously deselected package libssl0.9.8. Unpacking libssl0.9.8 (from .../libssl0.9.8_0.9.8e-5ubuntu3_hppa.deb) ... Selecting previously deselected package python2.5. Unpacking python2.5 (from .../python2.5_2.5.1-5ubuntu5_hppa.deb) ... Selecting previously deselected package python. Unpacking python (from .../python_2.5.1-1ubuntu2_all.deb) ... Selecting previously deselected package python-central. Unpacking python-central (from .../python-central_0.5.15ubuntu2_all.deb) ... Selecting previously deselected package x11-common. Unpacking x11-common (from .../x11-common_1%3a7.2-5ubuntu13_hppa.deb) ... Selecting previously deselected package libice6. Unpacking libice6 (from .../libice6_2%3a1.0.4-1_hppa.deb) ... Setting up x11-common (7.2-5ubuntu13) ... Selecting previously deselected package x11proto-core-dev. (Reading database ... 10707 files and directories currently installed.) Unpacking x11proto-core-dev (from .../x11proto-core-dev_7.0.11-1_all.deb) ... Selecting previously deselected package libice-dev. Unpacking libice-dev (from .../libice-dev_2%3a1.0.4-1_hppa.deb) ... Selecting previously deselected package libsm6. Unpacking libsm6 (from .../libsm6_2%3a1.0.3-1_hppa.deb) ... Selecting previously deselected package libsm-dev. Unpacking libsm-dev (from .../libsm-dev_2%3a1.0.3-1_hppa.deb) ... Selecting previously deselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.3-2_hppa.deb) ... Selecting previously deselected package libxdmcp6. Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.0.2-2_hppa.deb) ... Selecting previously deselected package libxcb1. Unpacking libxcb1 (from .../libxcb1_1.0-3_hppa.deb) ... Selecting previously deselected package libxcb-xlib0. Unpacking libxcb-xlib0 (from .../libxcb-xlib0_1.0-3_hppa.deb) ... Selecting previously deselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.1.3-1_all.deb) ... Selecting previously deselected package libx11-6. Unpacking libx11-6 (from .../libx11-6_2%3a1.1.3-1_hppa.deb) ... Selecting previously deselected package libxau-dev. Unpacking libxau-dev (from .../libxau-dev_1%3a1.0.3-2_hppa.deb) ... Selecting previously deselected package libxdmcp-dev. Unpacking libxdmcp-dev (from .../libxdmcp-dev_1%3a1.0.2-2_hppa.deb) ... Selecting previously deselected package x11proto-input-dev. Unpacking x11proto-input-dev (from .../x11proto-input-dev_1.4.2-1_all.deb) ... Selecting previously deselected package x11proto-kb-dev. Unpacking x11proto-kb-dev (from .../x11proto-kb-dev_1.0.3-2ubuntu1_all.deb) ... Selecting previously deselected package xtrans-dev. Unpacking xtrans-dev (from .../xtrans-dev_1.0.4-1_all.deb) ... Selecting previously deselected package libpthread-stubs0. Unpacking libpthread-stubs0 (from .../libpthread-stubs0_0.1-2_hppa.deb) ... Selecting previously deselected package libpthread-stubs0-dev. Unpacking libpthread-stubs0-dev (from .../libpthread-stubs0-dev_0.1-2_hppa.deb) ... Selecting previously deselected package libxcb1-dev. Unpacking libxcb1-dev (from .../libxcb1-dev_1.0-3_hppa.deb) ... Selecting previously deselected package libxcb-xlib0-dev. Unpacking libxcb-xlib0-dev (from .../libxcb-xlib0-dev_1.0-3_hppa.deb) ... Selecting previously deselected package libx11-dev. Unpacking libx11-dev (from .../libx11-dev_2%3a1.1.3-1_hppa.deb) ... Selecting previously deselected package libxext6. Unpacking libxext6 (from .../libxext6_2%3a1.0.3-2build1_hppa.deb) ... Selecting previously deselected package x11proto-xext-dev. Unpacking x11proto-xext-dev (from .../x11proto-xext-dev_7.0.2-5ubuntu1_all.deb) ... Selecting previously deselected package libxext-dev. Unpacking libxext-dev (from .../libxext-dev_2%3a1.0.3-2build1_hppa.deb) ... Selecting previously deselected package libxfixes3. Unpacking libxfixes3 (from .../libxfixes3_1%3a4.0.3-2_hppa.deb) ... Selecting previously deselected package libxt6. Unpacking libxt6 (from .../libxt6_1%3a1.0.5-3_hppa.deb) ... Selecting previously deselected package libxt-dev. Unpacking libxt-dev (from .../libxt-dev_1%3a1.0.5-3_hppa.deb) ... Selecting previously deselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.16.1-2ubuntu3_hppa.deb) ... Selecting previously deselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_4.21-3_hppa.deb) ... Selecting previously deselected package file. Unpacking file (from .../archives/file_4.21-3_hppa.deb) ... Selecting previously deselected package python-support. Unpacking python-support (from .../python-support_0.7.4ubuntu1_all.deb) ... Selecting previously deselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-3build1_hppa.deb) ... Selecting previously deselected package gettext. Unpacking gettext (from .../gettext_0.16.1-2ubuntu3_hppa.deb) ... Selecting previously deselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously deselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.9_all.deb) ... Selecting previously deselected package debhelper. Unpacking debhelper (from .../debhelper_5.0.59ubuntu1_all.deb) ... Selecting previously deselected package dpatch. Unpacking dpatch (from .../archives/dpatch_2.0.28_all.deb) ... Selecting previously deselected package libdrm2. Unpacking libdrm2 (from .../libdrm2_2.3.0-4ubuntu1_hppa.deb) ... Selecting previously deselected package libxdamage1. Unpacking libxdamage1 (from .../libxdamage1_1%3a1.1.1-3_hppa.deb) ... Selecting previously deselected package libxxf86vm1. Unpacking libxxf86vm1 (from .../libxxf86vm1_1%3a1.0.1-2_hppa.deb) ... Selecting previously deselected package libgl1-mesa-glx. Unpacking libgl1-mesa-glx (from .../libgl1-mesa-glx_7.0.1-1ubuntu3_hppa.deb) ... Selecting previously deselected package libglu1-mesa. Unpacking libglu1-mesa (from .../libglu1-mesa_7.0.1-1ubuntu3_hppa.deb) ... Selecting previously deselected package freeglut3. Unpacking freeglut3 (from .../freeglut3_2.4.0-5.1ubuntu1_hppa.deb) ... Selecting previously deselected package mesa-common-dev. Unpacking mesa-common-dev (from .../mesa-common-dev_7.0.1-1ubuntu3_all.deb) ... Selecting previously deselected package libgl1-mesa-dev. Unpacking libgl1-mesa-dev (from .../libgl1-mesa-dev_7.0.1-1ubuntu3_all.deb) ... Selecting previously deselected package xlibmesa-gl-dev. Unpacking xlibmesa-gl-dev (from .../xlibmesa-gl-dev_1%3a7.2-5ubuntu13_all.deb) ... Selecting previously deselected package libglu1-mesa-dev. Unpacking libglu1-mesa-dev (from .../libglu1-mesa-dev_7.0.1-1ubuntu3_hppa.deb) ... Selecting previously deselected package freeglut3-dev. Unpacking freeglut3-dev (from .../freeglut3-dev_2.4.0-5.1ubuntu1_hppa.deb) ... Selecting previously deselected package glutg3-dev. Unpacking glutg3-dev (from .../glutg3-dev_3.7-25_all.deb) ... Selecting previously deselected package libfreetype6. Unpacking libfreetype6 (from .../libfreetype6_2.3.5-1ubuntu4_hppa.deb) ... Selecting previously deselected package zlib1g-dev. Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.3.dfsg-5ubuntu2_hppa.deb) ... Selecting previously deselected package libfreetype6-dev. Unpacking libfreetype6-dev (from .../libfreetype6-dev_2.3.5-1ubuntu4_hppa.deb) ... Selecting previously deselected package libpng12-0. Unpacking libpng12-0 (from .../libpng12-0_1.2.15~beta5-3_hppa.deb) ... Selecting previously deselected package libpng12-dev. Unpacking libpng12-dev (from .../libpng12-dev_1.2.15~beta5-3_hppa.deb) ... Selecting previously deselected package python2.5-dev. Unpacking python2.5-dev (from .../python2.5-dev_2.5.1-5ubuntu5_hppa.deb) ... Selecting previously deselected package python-dev. Unpacking python-dev (from .../python-dev_2.5.1-1ubuntu2_all.deb) ... Selecting previously deselected package python-numeric. Unpacking python-numeric (from .../python-numeric_24.2-8_hppa.deb) ... Selecting previously deselected package tcl8.4. Unpacking tcl8.4 (from .../tcl8.4_8.4.16-3_hppa.deb) ... Selecting previously deselected package tcl8.4-dev. Unpacking tcl8.4-dev (from .../tcl8.4-dev_8.4.16-3_hppa.deb) ... Selecting previously deselected package tk8.4. Unpacking tk8.4 (from .../tk8.4_8.4.15-1ubuntu1_hppa.deb) ... Selecting previously deselected package tk8.4-dev. Unpacking tk8.4-dev (from .../tk8.4-dev_8.4.15-1ubuntu1_hppa.deb) ... Setting up mime-support (3.39-1) ... Setting up libbz2-1.0 (1.0.4-0ubuntu2) ... Setting up libncursesw5 (5.6+20070716-1ubuntu3) ... Setting up readline-common (5.2-3build1) ... Setting up libreadline5 (5.2-3build1) ... Setting up libsqlite3-0 (3.4.2-2) ... Setting up libssl0.9.8 (0.9.8e-5ubuntu3) ... Setting up python2.5 (2.5.1-5ubuntu5) ... Setting up python (2.5.1-1ubuntu2) ... Setting up python-central (0.5.15ubuntu2) ... Setting up libice6 (1.0.4-1) ... Setting up x11proto-core-dev (7.0.11-1) ... Setting up libice-dev (1.0.4-1) ... Setting up libsm6 (1.0.3-1) ... Setting up libsm-dev (1.0.3-1) ... Setting up libxau6 (1.0.3-2) ... Setting up libxdmcp6 (1.0.2-2) ... Setting up libxcb1 (1.0-3) ... Setting up libxcb-xlib0 (1.0-3) ... Setting up libx11-data (1.1.3-1) ... Setting up libx11-6 (1.1.3-1) ... Setting up libxau-dev (1.0.3-2) ... Setting up libxdmcp-dev (1.0.2-2) ... Setting up x11proto-input-dev (1.4.2-1) ... Setting up x11proto-kb-dev (1.0.3-2ubuntu1) ... Setting up xtrans-dev (1.0.4-1) ... Setting up libpthread-stubs0 (0.1-2) ... Setting up libpthread-stubs0-dev (0.1-2) ... Setting up libxcb1-dev (1.0-3) ... Setting up libxcb-xlib0-dev (1.0-3) ... Setting up libx11-dev (1.1.3-1) ... Setting up libxext6 (1.0.3-2build1) ... Setting up x11proto-xext-dev (7.0.2-5ubuntu1) ... Setting up libxext-dev (1.0.3-2build1) ... Setting up libxfixes3 (4.0.3-2) ... Setting up libxt6 (1.0.5-3) ... Setting up libxt-dev (1.0.5-3) ... Setting up gettext-base (0.16.1-2ubuntu3) ... Setting up libmagic1 (4.21-3) ... Setting up file (4.21-3) ... Setting up python-support (0.7.4ubuntu1) ... Setting up html2text (1.3.2a-3build1) ... Setting up gettext (0.16.1-2ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.9) ... Setting up debhelper (5.0.59ubuntu1) ... Setting up dpatch (2.0.28) ... Setting up libdrm2 (2.3.0-4ubuntu1) ... Setting up libxdamage1 (1.1.1-3) ... Setting up libxxf86vm1 (1.0.1-2) ... Setting up libgl1-mesa-glx (7.0.1-1ubuntu3) ... Setting up libglu1-mesa (7.0.1-1ubuntu3) ... Setting up freeglut3 (2.4.0-5.1ubuntu1) ... Setting up mesa-common-dev (7.0.1-1ubuntu3) ... Setting up libgl1-mesa-dev (7.0.1-1ubuntu3) ... Setting up xlibmesa-gl-dev (7.2-5ubuntu13) ... Setting up libglu1-mesa-dev (7.0.1-1ubuntu3) ... Setting up freeglut3-dev (2.4.0-5.1ubuntu1) ... Setting up glutg3-dev (3.7-25) ... Setting up libfreetype6 (2.3.5-1ubuntu4) ... Setting up zlib1g-dev (1.2.3.3.dfsg-5ubuntu2) ... Setting up libfreetype6-dev (2.3.5-1ubuntu4) ... Setting up libpng12-0 (1.2.15~beta5-3) ... Setting up libpng12-dev (1.2.15~beta5-3) ... Setting up python2.5-dev (2.5.1-5ubuntu5) ... Setting up python-dev (2.5.1-1ubuntu2) ... Setting up python-numeric (24.2-8) ... Setting up tcl8.4 (8.4.16-3) ... Setting up tcl8.4-dev (8.4.16-3) ... Setting up tk8.4 (8.4.15-1ubuntu1) ... Setting up tk8.4-dev (8.4.15-1ubuntu1) ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.6.1-6ubuntu2 make_3.81-3build1 dpkg-dev_1.14.5ubuntu16 gcc-4.2_4.2.2-3ubuntu3 g++-4.2_4.2.2-3ubuntu3 binutils_2.18.1~cvs20071027-1ubuntu1 libstdc++6-4.2-dev_4.2.2-3ubuntu3 libstdc++6_4.2.2-3ubuntu3 ------------------------------------------------------------------------------ dpkg-source: extracting pymol in pymol-1.0r2 dpkg-source: unpacking pymol_1.0r2.orig.tar.gz dpkg-source: applying /home/buildd/build-422184-1018766/pymol_1.0r2-1.diff.gz dpkg-buildpackage: source package is pymol dpkg-buildpackage: source version is 1.0r2-1 dpkg-buildpackage: host architecture hppa dpkg-buildpackage: source version without epoch 1.0r2-1 /usr/bin/fakeroot debian/rules clean dpatch deapply-all 13_activate_vmd_plugin not applied to ./ . 12_align_matrix not applied to ./ . 11_fix__cmd_import not applied to ./ . 09_chempy_data_path not applied to ./ . 06_remove_shebang not applied to ./ . 05_examples_data_path not applied to ./ . 04_Rules.make not applied to ./ . 03_povray not applied to ./ . 02_test-suite not applied to ./ . rm -rf patch-stamp patch-stampT debian/patched dh_testdir dh_testroot [ ! -f Makefile ] || /usr/bin/make distclean rm -rf test/tmp test/cmp python setup.py clean running clean After running: python setup.py install Please run, to complete the installation: python setup2.py install To uninstall PyMOL, run: python setup2.py uninstall rm -f build-stamp install-stamp rm -f debian/pymol.launch dh_clean debian/rules build test -d debian/patched || install -d debian/patched dpatch apply-all applying patch 02_test-suite to ./ ... ok. applying patch 03_povray to ./ ... ok. applying patch 04_Rules.make to ./ ... ok. applying patch 05_examples_data_path to ./ ... ok. applying patch 06_remove_shebang to ./ ... ok. applying patch 09_chempy_data_path to ./ ... ok. applying patch 11_fix__cmd_import to ./ ... ok. applying patch 12_align_matrix to ./ ... ok. applying patch 13_activate_vmd_plugin to ./ ... ok. dpatch cat-all >>patch-stampT mv -f patch-stampT patch-stamp sed -e s/@PYTHON_VERSION@/2.5/g < debian/pymol.launch.in > debian/pymol.launch dh_testdir python setup.py build running build running build_py creating build creating build/lib.linux-parisc-2.5 creating build/lib.linux-parisc-2.5/chempy copying modules/chempy/cpv.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/xyz.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/io.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/__init__.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/protein_amber.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/gamess1.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/mae.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/mass.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/pdb.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/arc.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/bonds.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/cc1.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/bond_amber.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/protein.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/place.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/charge.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/pkl.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/gms.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/protein_residues.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/lst.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/water_residues.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/water_amber.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/dictdb.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/brick.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/neighbor.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/sdf.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/protein_amber99.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/mmd.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/map.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/cex.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/solvate.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/protein_mmff.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/hetatm.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/models.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/mol.py -> build/lib.linux-parisc-2.5/chempy copying modules/chempy/bond_mmff.py -> build/lib.linux-parisc-2.5/chempy creating build/lib.linux-parisc-2.5/chempy/bmin copying modules/chempy/bmin/__init__.py -> build/lib.linux-parisc-2.5/chempy/bmin copying modules/chempy/bmin/util.py -> build/lib.linux-parisc-2.5/chempy/bmin copying modules/chempy/bmin/commands.py -> build/lib.linux-parisc-2.5/chempy/bmin copying modules/chempy/bmin/state.py -> build/lib.linux-parisc-2.5/chempy/bmin copying modules/chempy/bmin/realtime.py -> build/lib.linux-parisc-2.5/chempy/bmin creating build/lib.linux-parisc-2.5/chempy/champ copying modules/chempy/champ/__init__.py -> build/lib.linux-parisc-2.5/chempy/champ copying modules/chempy/champ/amber99.py -> build/lib.linux-parisc-2.5/chempy/champ copying modules/chempy/champ/formal_charges.py -> build/lib.linux-parisc-2.5/chempy/champ copying modules/chempy/champ/assign.py -> build/lib.linux-parisc-2.5/chempy/champ creating build/lib.linux-parisc-2.5/chempy/fast copying modules/chempy/fast/__init__.py -> build/lib.linux-parisc-2.5/chempy/fast creating build/lib.linux-parisc-2.5/chempy/fragments copying modules/chempy/fragments/__init__.py -> build/lib.linux-parisc-2.5/chempy/fragments creating build/lib.linux-parisc-2.5/chempy/tinker copying modules/chempy/tinker/__init__.py -> build/lib.linux-parisc-2.5/chempy/tinker copying modules/chempy/tinker/state.py -> build/lib.linux-parisc-2.5/chempy/tinker copying modules/chempy/tinker/realtime.py -> build/lib.linux-parisc-2.5/chempy/tinker copying modules/chempy/tinker/keyword.py -> build/lib.linux-parisc-2.5/chempy/tinker copying modules/chempy/tinker/amber.py -> build/lib.linux-parisc-2.5/chempy/tinker creating build/lib.linux-parisc-2.5/pmg_tk copying modules/pmg_tk/__init__.py -> build/lib.linux-parisc-2.5/pmg_tk copying modules/pmg_tk/Setting.py -> build/lib.linux-parisc-2.5/pmg_tk copying modules/pmg_tk/ColorEditor.py -> build/lib.linux-parisc-2.5/pmg_tk copying modules/pmg_tk/SetEditor.py -> build/lib.linux-parisc-2.5/pmg_tk copying modules/pmg_tk/Demo.py -> build/lib.linux-parisc-2.5/pmg_tk copying modules/pmg_tk/PMGApp.py -> build/lib.linux-parisc-2.5/pmg_tk creating build/lib.linux-parisc-2.5/pmg_tk/startup copying modules/pmg_tk/startup/apbs_tools.py -> build/lib.linux-parisc-2.5/pmg_tk/startup copying modules/pmg_tk/startup/__init__.py -> build/lib.linux-parisc-2.5/pmg_tk/startup copying modules/pmg_tk/startup/remote_pdb_load.py -> build/lib.linux-parisc-2.5/pmg_tk/startup creating build/lib.linux-parisc-2.5/pmg_tk/skins copying modules/pmg_tk/skins/__init__.py -> build/lib.linux-parisc-2.5/pmg_tk/skins creating build/lib.linux-parisc-2.5/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/__init__.py -> build/lib.linux-parisc-2.5/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/builder.py -> build/lib.linux-parisc-2.5/pmg_tk/skins/normal creating build/lib.linux-parisc-2.5/pmg_wx copying modules/pmg_wx/__init__.py -> build/lib.linux-parisc-2.5/pmg_wx creating build/lib.linux-parisc-2.5/pymol copying modules/pymol/completing.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/creating.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/wizarding.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/moving.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/__init__.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/externing.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/preset.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/importing.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/parsing.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/menu.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/fitting.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/m4x.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/api.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/cgo.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/internal.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/experimenting.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/selecting.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/util.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/feedingback.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/exporting.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/locking.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/controlling.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/editor.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/callback.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/parser.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/vfont.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/keyboard.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/querying.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/contrib.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/cmd.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/keywords.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/invocation.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/viewing.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/commanding.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/checking.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/shortcut.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/constants.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/selector.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/setting.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/movie.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/povray.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/monitoring.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/editing.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/xray.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/rpc.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/helping.py -> build/lib.linux-parisc-2.5/pymol copying modules/pymol/xwin.py -> build/lib.linux-parisc-2.5/pymol creating build/lib.linux-parisc-2.5/pymol/opengl copying modules/pymol/opengl/__init__.py -> build/lib.linux-parisc-2.5/pymol/opengl creating build/lib.linux-parisc-2.5/pymol/opengl/gl copying modules/pymol/opengl/gl/__init__.py -> build/lib.linux-parisc-2.5/pymol/opengl/gl copying modules/pymol/opengl/gl/glconst.py -> build/lib.linux-parisc-2.5/pymol/opengl/gl creating build/lib.linux-parisc-2.5/pymol/opengl/glu copying modules/pymol/opengl/glu/gluconst.py -> build/lib.linux-parisc-2.5/pymol/opengl/glu copying modules/pymol/opengl/glu/__init__.py -> build/lib.linux-parisc-2.5/pymol/opengl/glu creating build/lib.linux-parisc-2.5/pymol/opengl/glut copying modules/pymol/opengl/glut/__init__.py -> build/lib.linux-parisc-2.5/pymol/opengl/glut copying modules/pymol/opengl/glut/glutconst.py -> build/lib.linux-parisc-2.5/pymol/opengl/glut creating build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/density.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/label.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/box.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/distance.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/charge.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/benchmark.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/pair_fit.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/appearance.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/__init__.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/fedora.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/renaming.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/stereodemo.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/security.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/sculpting.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/annotation.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/dragging.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/toggle.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/mutagenesis.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/message.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/demo.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/measurement.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/filter.py -> build/lib.linux-parisc-2.5/pymol/wizard copying modules/pymol/wizard/cleanup.py -> build/lib.linux-parisc-2.5/pymol/wizard running build_ext building 'pymol._cmd' extension creating build/temp.linux-parisc-2.5 creating build/temp.linux-parisc-2.5/ov creating build/temp.linux-parisc-2.5/ov/src creating build/temp.linux-parisc-2.5/layer0 creating build/temp.linux-parisc-2.5/layer1 creating build/temp.linux-parisc-2.5/layer2 creating build/temp.linux-parisc-2.5/layer3 creating build/temp.linux-parisc-2.5/layer4 creating build/temp.linux-parisc-2.5/layer5 creating build/temp.linux-parisc-2.5/contrib creating build/temp.linux-parisc-2.5/contrib/uiuc creating build/temp.linux-parisc-2.5/contrib/uiuc/plugins creating build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin creating build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c ov/src/OVContext.c -o build/temp.linux-parisc-2.5/ov/src/OVContext.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c ov/src/OVHeapArray.c -o build/temp.linux-parisc-2.5/ov/src/OVHeapArray.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c ov/src/OVHeap.c -o build/temp.linux-parisc-2.5/ov/src/OVHeap.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c ov/src/OVLexicon.c -o build/temp.linux-parisc-2.5/ov/src/OVLexicon.o -ffast-math -funroll-loops -O3 ov/src/OVLexicon.c: In function 'OVLexicon_GetFromCString': ov/src/OVLexicon.c:288: warning: 'result.word' may be used uninitialized in this function ov/src/OVLexicon.c:306: warning: 'result.word' may be used uninitialized in this function gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c ov/src/OVOneToOne.c -o build/temp.linux-parisc-2.5/ov/src/OVOneToOne.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c ov/src/OVOneToAny.c -o build/temp.linux-parisc-2.5/ov/src/OVOneToAny.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c ov/src/OVRandom.c -o build/temp.linux-parisc-2.5/ov/src/OVRandom.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c ov/src/ov_utility.c -o build/temp.linux-parisc-2.5/ov/src/ov_utility.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Block.c -o build/temp.linux-parisc-2.5/layer0/Block.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Crystal.c -o build/temp.linux-parisc-2.5/layer0/Crystal.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Debug.c -o build/temp.linux-parisc-2.5/layer0/Debug.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Deferred.c -o build/temp.linux-parisc-2.5/layer0/Deferred.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Err.c -o build/temp.linux-parisc-2.5/layer0/Err.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Feedback.c -o build/temp.linux-parisc-2.5/layer0/Feedback.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Field.c -o build/temp.linux-parisc-2.5/layer0/Field.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Isosurf.c -o build/temp.linux-parisc-2.5/layer0/Isosurf.o -ffast-math -funroll-loops -O3 layer0/Isosurf.c: In function 'IsosurfGradients': layer0/Isosurf.c:986: warning: 'prev_grad_normal[0]' may be used uninitialized in this function layer0/Isosurf.c:986: warning: 'prev_grad_normal[1]' may be used uninitialized in this function layer0/Isosurf.c:986: warning: 'prev_grad_normal[2]' may be used uninitialized in this function gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Map.c -o build/temp.linux-parisc-2.5/layer0/Map.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Match.c -o build/temp.linux-parisc-2.5/layer0/Match.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Matrix.c -o build/temp.linux-parisc-2.5/layer0/Matrix.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/MemoryDebug.c -o build/temp.linux-parisc-2.5/layer0/MemoryDebug.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/MemoryCache.c -o build/temp.linux-parisc-2.5/layer0/MemoryCache.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/MyPNG.c -o build/temp.linux-parisc-2.5/layer0/MyPNG.o -ffast-math -funroll-loops -O3 In file included from /usr/include/python2.5/Python.h:8, from layer0/os_python.h:28, from layer1/Setting.h:19, from layer0/MyPNG.c:38: /usr/include/python2.5/pyconfig.h:918:1: warning: "_BSD_SOURCE" redefined In file included from /usr/include/png.h:387, from layer0/MyPNG.c:18: /usr/include/pngconf.h:327:1: warning: this is the location of the previous definition gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Parse.c -o build/temp.linux-parisc-2.5/layer0/Parse.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Pixmap.c -o build/temp.linux-parisc-2.5/layer0/Pixmap.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Queue.c -o build/temp.linux-parisc-2.5/layer0/Queue.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Raw.c -o build/temp.linux-parisc-2.5/layer0/Raw.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Sphere.c -o build/temp.linux-parisc-2.5/layer0/Sphere.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Tetsurf.c -o build/temp.linux-parisc-2.5/layer0/Tetsurf.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Texture.c -o build/temp.linux-parisc-2.5/layer0/Texture.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Tracker.c -o build/temp.linux-parisc-2.5/layer0/Tracker.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Triangle.c -o build/temp.linux-parisc-2.5/layer0/Triangle.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Util.c -o build/temp.linux-parisc-2.5/layer0/Util.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Vector.c -o build/temp.linux-parisc-2.5/layer0/Vector.o -ffast-math -funroll-loops -O3 layer0/Vector.c:1297: warning: 'normalize3df' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/Word.c -o build/temp.linux-parisc-2.5/layer0/Word.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer0/os_gl.c -o build/temp.linux-parisc-2.5/layer0/os_gl.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Basis.c -o build/temp.linux-parisc-2.5/layer1/Basis.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/ButMode.c -o build/temp.linux-parisc-2.5/layer1/ButMode.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Character.c -o build/temp.linux-parisc-2.5/layer1/Character.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/CGO.c -o build/temp.linux-parisc-2.5/layer1/CGO.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Color.c -o build/temp.linux-parisc-2.5/layer1/Color.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Control.c -o build/temp.linux-parisc-2.5/layer1/Control.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Extrude.c -o build/temp.linux-parisc-2.5/layer1/Extrude.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Font.c -o build/temp.linux-parisc-2.5/layer1/Font.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/FontType.c -o build/temp.linux-parisc-2.5/layer1/FontType.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/FontGLUT.c -o build/temp.linux-parisc-2.5/layer1/FontGLUT.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/FontGLUT8x13.c -o build/temp.linux-parisc-2.5/layer1/FontGLUT8x13.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/FontGLUT9x15.c -o build/temp.linux-parisc-2.5/layer1/FontGLUT9x15.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/FontGLUTHel10.c -o build/temp.linux-parisc-2.5/layer1/FontGLUTHel10.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/FontGLUTHel12.c -o build/temp.linux-parisc-2.5/layer1/FontGLUTHel12.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/FontGLUTHel18.c -o build/temp.linux-parisc-2.5/layer1/FontGLUTHel18.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Movie.c -o build/temp.linux-parisc-2.5/layer1/Movie.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Ortho.c -o build/temp.linux-parisc-2.5/layer1/Ortho.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/P.c -o build/temp.linux-parisc-2.5/layer1/P.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/PConv.c -o build/temp.linux-parisc-2.5/layer1/PConv.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Pop.c -o build/temp.linux-parisc-2.5/layer1/Pop.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/PyMOLObject.c -o build/temp.linux-parisc-2.5/layer1/PyMOLObject.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Ray.c -o build/temp.linux-parisc-2.5/layer1/Ray.o -ffast-math -funroll-loops -O3 layer1/Basis.c: In function 'BasisHitShadow': layer1/Basis.c:1791: warning: 'dist' may be used uninitialized in this function layer1/Basis.c: In function 'BasisHitNoShadow': layer1/Basis.c:1525: warning: 'dist' may be used uninitialized in this function layer1/Basis.c: In function 'BasisHitPerspective': layer1/Basis.c:1134: warning: 'tri1' may be used uninitialized in this function layer1/Ray.c: In function 'RayTraceThread': layer1/Ray.c:2154: warning: 'interior_normal[0]' may be used uninitialized in this function layer1/Ray.c:2154: warning: 'interior_normal[1]' may be used uninitialized in this function layer1/Ray.c:2154: warning: 'interior_normal[2]' may be used uninitialized in this function layer1/Ray.c:2172: warning: 'nudge[0]' may be used uninitialized in this function layer1/Ray.c:2172: warning: 'nudge[1]' may be used uninitialized in this function layer1/Ray.c:2172: warning: 'nudge[2]' may be used uninitialized in this function layer1/Ray.c:2172: warning: 'start[0]' may be used uninitialized in this function layer1/Ray.c:2172: warning: 'start[1]' may be used uninitialized in this function layer1/Ray.c:2172: warning: 'start[2]' may be used uninitialized in this function layer1/Ray.c:2153: warning: 'edge_base[0]' may be used uninitialized in this function layer1/Ray.c:2153: warning: 'edge_base[1]' may be used uninitialized in this function layer1/Ray.c:2151: warning: 'edge_alpha_avg[0]' may be used uninitialized in this function layer1/Ray.c:2151: warning: 'edge_alpha_avg[1]' may be used uninitialized in this function layer1/Ray.c:2151: warning: 'edge_alpha_avg[2]' may be used uninitialized in this function layer1/Ray.c:2151: warning: 'edge_alpha_avg[3]' may be used uninitialized in this function layer1/Ray.c:2151: warning: 'edge_avg[0]' may be used uninitialized in this function layer1/Ray.c:2151: warning: 'edge_avg[1]' may be used uninitialized in this function layer1/Ray.c:2151: warning: 'edge_avg[2]' may be used uninitialized in this function layer1/Ray.c:2151: warning: 'edge_avg[3]' may be used uninitialized in this function gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Rep.c -o build/temp.linux-parisc-2.5/layer1/Rep.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Scene.c -o build/temp.linux-parisc-2.5/layer1/Scene.o -ffast-math -funroll-loops -O3 layer1/Scene.c:2206: warning: 'SceneDrawButtons' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/ScrollBar.c -o build/temp.linux-parisc-2.5/layer1/ScrollBar.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Seq.c -o build/temp.linux-parisc-2.5/layer1/Seq.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Setting.c -o build/temp.linux-parisc-2.5/layer1/Setting.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Shaker.c -o build/temp.linux-parisc-2.5/layer1/Shaker.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Symmetry.c -o build/temp.linux-parisc-2.5/layer1/Symmetry.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Text.c -o build/temp.linux-parisc-2.5/layer1/Text.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/TypeFace.c -o build/temp.linux-parisc-2.5/layer1/TypeFace.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/Wizard.c -o build/temp.linux-parisc-2.5/layer1/Wizard.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer1/View.c -o build/temp.linux-parisc-2.5/layer1/View.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/AtomInfo.c -o build/temp.linux-parisc-2.5/layer2/AtomInfo.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/CoordSet.c -o build/temp.linux-parisc-2.5/layer2/CoordSet.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/GadgetSet.c -o build/temp.linux-parisc-2.5/layer2/GadgetSet.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/DistSet.c -o build/temp.linux-parisc-2.5/layer2/DistSet.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectAlignment.c -o build/temp.linux-parisc-2.5/layer2/ObjectAlignment.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectCGO.c -o build/temp.linux-parisc-2.5/layer2/ObjectCGO.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectCallback.c -o build/temp.linux-parisc-2.5/layer2/ObjectCallback.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectDist.c -o build/temp.linux-parisc-2.5/layer2/ObjectDist.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectMap.c -o build/temp.linux-parisc-2.5/layer2/ObjectMap.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectMesh.c -o build/temp.linux-parisc-2.5/layer2/ObjectMesh.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectMolecule.c -o build/temp.linux-parisc-2.5/layer2/ObjectMolecule.o -ffast-math -funroll-loops -O3 layer2/ObjectMolecule.c: In function 'ObjectMoleculeFuse': layer2/ObjectMolecule.c:3300: warning: 'va1[0]' may be used uninitialized in this function layer2/ObjectMolecule.c:3300: warning: 'va1[1]' may be used uninitialized in this function layer2/ObjectMolecule.c:3300: warning: 'va1[2]' may be used uninitialized in this function layer2/ObjectMolecule.c:3300: warning: 'va0[0]' may be used uninitialized in this function layer2/ObjectMolecule.c:3300: warning: 'va0[1]' may be used uninitialized in this function layer2/ObjectMolecule.c:3300: warning: 'va0[2]' may be used uninitialized in this function gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectMolecule2.c -o build/temp.linux-parisc-2.5/layer2/ObjectMolecule2.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectSurface.c -o build/temp.linux-parisc-2.5/layer2/ObjectSurface.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectSlice.c -o build/temp.linux-parisc-2.5/layer2/ObjectSlice.o -ffast-math -funroll-loops -O3 layer2/ObjectSlice.c: In function 'ObjectSliceRender': layer2/ObjectSlice.c:1065: warning: 'p.context.state' is used uninitialized in this function layer2/ObjectSlice.c:1023: warning: 'p.src.bond' may be used uninitialized in this function gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepCartoon.c -o build/temp.linux-parisc-2.5/layer2/RepCartoon.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepCylBond.c -o build/temp.linux-parisc-2.5/layer2/RepCylBond.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepDistDash.c -o build/temp.linux-parisc-2.5/layer2/RepDistDash.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepDistLabel.c -o build/temp.linux-parisc-2.5/layer2/RepDistLabel.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepDot.c -o build/temp.linux-parisc-2.5/layer2/RepDot.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepLabel.c -o build/temp.linux-parisc-2.5/layer2/RepLabel.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepMesh.c -o build/temp.linux-parisc-2.5/layer2/RepMesh.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectGadget.c -o build/temp.linux-parisc-2.5/layer2/ObjectGadget.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectGadgetRamp.c -o build/temp.linux-parisc-2.5/layer2/ObjectGadgetRamp.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/ObjectGroup.c -o build/temp.linux-parisc-2.5/layer2/ObjectGroup.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepAngle.c -o build/temp.linux-parisc-2.5/layer2/RepAngle.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepDihedral.c -o build/temp.linux-parisc-2.5/layer2/RepDihedral.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepNonbonded.c -o build/temp.linux-parisc-2.5/layer2/RepNonbonded.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepNonbondedSphere.c -o build/temp.linux-parisc-2.5/layer2/RepNonbondedSphere.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepRibbon.c -o build/temp.linux-parisc-2.5/layer2/RepRibbon.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepSphere.c -o build/temp.linux-parisc-2.5/layer2/RepSphere.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepSurface.c -o build/temp.linux-parisc-2.5/layer2/RepSurface.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/RepWireBond.c -o build/temp.linux-parisc-2.5/layer2/RepWireBond.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/Sculpt.c -o build/temp.linux-parisc-2.5/layer2/Sculpt.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/SculptCache.c -o build/temp.linux-parisc-2.5/layer2/SculptCache.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer2/VFont.c -o build/temp.linux-parisc-2.5/layer2/VFont.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer3/PlugIOManager.c -o build/temp.linux-parisc-2.5/layer3/PlugIOManager.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer3/Editor.c -o build/temp.linux-parisc-2.5/layer3/Editor.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer3/Executive.c -o build/temp.linux-parisc-2.5/layer3/Executive.o -ffast-math -funroll-loops -O3 layer3/Executive.c: In function 'ExecutiveIterateState': layer3/Executive.c:8183: warning: 'stop_state' may be used uninitialized in this function layer3/Executive.c:8183: warning: 'start_state' may be used uninitialized in this function gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer3/Seeker.c -o build/temp.linux-parisc-2.5/layer3/Seeker.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer3/Selector.c -o build/temp.linux-parisc-2.5/layer3/Selector.o -ffast-math -funroll-loops -O3 layer3/Selector.c: In function 'SelectorSubdivide': layer3/Selector.c:4755: warning: 'minWalk.sum' may be used uninitialized in this function gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer4/Cmd.c -o build/temp.linux-parisc-2.5/layer4/Cmd.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer4/Export.c -o build/temp.linux-parisc-2.5/layer4/Export.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer4/Menu.c -o build/temp.linux-parisc-2.5/layer4/Menu.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer4/PopUp.c -o build/temp.linux-parisc-2.5/layer4/PopUp.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer5/PyMOL.c -o build/temp.linux-parisc-2.5/layer5/PyMOL.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer5/TestPyMOL.c -o build/temp.linux-parisc-2.5/layer5/TestPyMOL.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c layer5/main.c -o build/temp.linux-parisc-2.5/layer5/main.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:306: warning: 'void getdreiidff(char*, const char*, int&, int&)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/carplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/carplugin.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp: In function 'int read_ccp4_data(void*, int, float*, float*)': contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:332: warning: comparison between signed and unsigned integer expressions contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32: warning: 'void swap2_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46: warning: 'void swap4_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65: warning: 'void swap8_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96: warning: 'void swap2_aligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124: warning: 'void swap8_aligned(void*, long int)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/corplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/corplugin.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/cpmdplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/cpmdplugin.o -ffast-math -funroll-loops -O3 contrib/uiuc/plugins/molfile_plugin/src/cpmdplugin.c:89: warning: 'read_cpmd_structure' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:131: warning: 'int get_pte_idx(const char*)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:156: warning: 'int get_pte_idx_from_string(const char*)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.o -ffast-math -funroll-loops -O3 contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32: warning: 'swap2_unaligned' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96: warning: 'swap2_aligned' defined but not used contrib/uiuc/plugins/molfile_plugin/src/fastio.h:446: warning: 'fio_read_int32' defined but not used contrib/uiuc/plugins/molfile_plugin/src/fastio.h:450: warning: 'fio_write_str' defined but not used contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c: In function 'write_timestep': contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:683: warning: passing argument 1 of 'fio_fwrite' discards qualifiers from pointer target type contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:691: warning: passing argument 1 of 'fio_fwrite' discards qualifiers from pointer target type contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:694: warning: passing argument 1 of 'fio_fwrite' discards qualifiers from pointer target type contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:697: warning: passing argument 1 of 'fio_fwrite' discards qualifiers from pointer target type gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46: warning: 'void swap4_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65: warning: 'void swap8_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:110: warning: 'void swap4_aligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124: warning: 'void swap8_aligned(void*, long int)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function 'int read_edm_data(void*, int, float*, float*)': contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:201: warning: unused variable 'l' contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:214: warning: unused variable 'leftover' gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32: warning: 'void swap2_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46: warning: 'void swap4_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65: warning: 'void swap8_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96: warning: 'void swap2_aligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124: warning: 'void swap8_aligned(void*, long int)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.o -ffast-math -funroll-loops -O3 contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1216: warning: 'animate_normal_mode' defined but not used contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1167: warning: 'initialize_animated_mode' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32: warning: 'void swap2_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46: warning: 'void swap4_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65: warning: 'void swap8_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124: warning: 'void swap8_aligned(void*, long int)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32: warning: 'void swap2_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46: warning: 'void swap4_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65: warning: 'void swap8_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96: warning: 'void swap2_aligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124: warning: 'void swap8_aligned(void*, long int)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32: warning: 'void swap2_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46: warning: 'void swap4_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65: warning: 'void swap8_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96: warning: 'void swap2_aligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124: warning: 'void swap8_aligned(void*, long int)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h: In function 'int xtc_3dfcoord(md_file*, float*, int*, float*)': contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1758: warning: 'minint[0]' may be used uninitialized in this function contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1758: warning: 'minint[1]' may be used uninitialized in this function contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1758: warning: 'minint[2]' may be used uninitialized in this function contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1758: warning: 'maxint[0]' may be used uninitialized in this function contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1758: warning: 'maxint[1]' may be used uninitialized in this function contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1758: warning: 'maxint[2]' may be used uninitialized in this function contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1760: warning: 'bitsizeint[0]' may be used uninitialized in this function contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1760: warning: 'bitsizeint[1]' may be used uninitialized in this function contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1760: warning: 'bitsizeint[2]' may be used uninitialized in this function contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1759: warning: 'smallidx' may be used uninitialized in this function contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32: warning: 'void swap2_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46: warning: 'void swap4_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65: warning: 'void swap8_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96: warning: 'void swap2_aligned(void*, long int)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/hash.c:183: warning: 'int hash_delete(hash_t*, const char*)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/hash.c:270: warning: 'char* hash_stats(hash_t*)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o -ffast-math -funroll-loops -O3 contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:132: warning: 'get_pte_idx' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp: In function 'int read_plt_data(void*, int, float*, float*)': contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:143: warning: comparison between signed and unsigned integer expressions contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32: warning: 'void swap2_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46: warning: 'void swap4_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65: warning: 'void swap8_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96: warning: 'void swap2_aligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124: warning: 'void swap8_aligned(void*, long int)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp: In function 'int read_spider_data(void*, int, float*, float*)': contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:277: warning: unused variable 'x' contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:277: warning: unused variable 'y' contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:277: warning: unused variable 'z' contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32: warning: 'void swap2_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46: warning: 'void swap4_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65: warning: 'void swap8_unaligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96: warning: 'void swap2_aligned(void*, long int)' defined but not used contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124: warning: 'void swap8_aligned(void*, long int)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.o -ffast-math -funroll-loops -O3 gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.o -ffast-math -funroll-loops -O3 cc1plus: warning: command line option "-Wstrict-prototypes" is valid for Ada/C/ObjC but not for C++ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:156: warning: 'int get_pte_idx_from_string(const char*)' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c -o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.o -ffast-math -funroll-loops -O3 contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:156: warning: 'get_pte_idx_from_string' defined but not used g++ -pthread -shared -Wl,-O1 build/temp.linux-parisc-2.5/ov/src/OVContext.o build/temp.linux-parisc-2.5/ov/src/OVHeapArray.o build/temp.linux-parisc-2.5/ov/src/OVHeap.o build/temp.linux-parisc-2.5/ov/src/OVLexicon.o build/temp.linux-parisc-2.5/ov/src/OVOneToOne.o build/temp.linux-parisc-2.5/ov/src/OVOneToAny.o build/temp.linux-parisc-2.5/ov/src/OVRandom.o build/temp.linux-parisc-2.5/ov/src/ov_utility.o build/temp.linux-parisc-2.5/layer0/Block.o build/temp.linux-parisc-2.5/layer0/Crystal.o build/temp.linux-parisc-2.5/layer0/Debug.o build/temp.linux-parisc-2.5/layer0/Deferred.o build/temp.linux-parisc-2.5/layer0/Err.o build/temp.linux-parisc-2.5/layer0/Feedback.o build/temp.linux-parisc-2.5/layer0/Field.o build/temp.linux-parisc-2.5/layer0/Isosurf.o build/temp.linux-parisc-2.5/layer0/Map.o build/temp.linux-parisc-2.5/layer0/Match.o build/temp.linux-parisc-2.5/layer0/Matrix.o build/temp.linux-parisc-2.5/layer0/MemoryDebug.o build/temp.linux-parisc-2.5/layer0/MemoryCache.o build/temp.linux-parisc-2.5/layer0/MyPNG.o build/temp.linux-parisc-2.5/layer0/Parse.o build/temp.linux-parisc-2.5/layer0/Pixmap.o build/temp.linux-parisc-2.5/layer0/Queue.o build/temp.linux-parisc-2.5/layer0/Raw.o build/temp.linux-parisc-2.5/layer0/Sphere.o build/temp.linux-parisc-2.5/layer0/Tetsurf.o build/temp.linux-parisc-2.5/layer0/Texture.o build/temp.linux-parisc-2.5/layer0/Tracker.o build/temp.linux-parisc-2.5/layer0/Triangle.o build/temp.linux-parisc-2.5/layer0/Util.o build/temp.linux-parisc-2.5/layer0/Vector.o build/temp.linux-parisc-2.5/layer0/Word.o build/temp.linux-parisc-2.5/layer0/os_gl.o build/temp.linux-parisc-2.5/layer1/Basis.o build/temp.linux-parisc-2.5/layer1/ButMode.o build/temp.linux-parisc-2.5/layer1/Character.o build/temp.linux-parisc-2.5/layer1/CGO.o build/temp.linux-parisc-2.5/layer1/Color.o build/temp.linux-parisc-2.5/layer1/Control.o build/temp.linux-parisc-2.5/layer1/Extrude.o build/temp.linux-parisc-2.5/layer1/Font.o build/temp.linux-parisc-2.5/layer1/FontType.o build/temp.linux-parisc-2.5/layer1/FontGLUT.o build/temp.linux-parisc-2.5/layer1/FontGLUT8x13.o build/temp.linux-parisc-2.5/layer1/FontGLUT9x15.o build/temp.linux-parisc-2.5/layer1/FontGLUTHel10.o build/temp.linux-parisc-2.5/layer1/FontGLUTHel12.o build/temp.linux-parisc-2.5/layer1/FontGLUTHel18.o build/temp.linux-parisc-2.5/layer1/Movie.o build/temp.linux-parisc-2.5/layer1/Ortho.o build/temp.linux-parisc-2.5/layer1/P.o build/temp.linux-parisc-2.5/layer1/PConv.o build/temp.linux-parisc-2.5/layer1/Pop.o build/temp.linux-parisc-2.5/layer1/PyMOLObject.o build/temp.linux-parisc-2.5/layer1/Ray.o build/temp.linux-parisc-2.5/layer1/Rep.o build/temp.linux-parisc-2.5/layer1/Scene.o build/temp.linux-parisc-2.5/layer1/ScrollBar.o build/temp.linux-parisc-2.5/layer1/Seq.o build/temp.linux-parisc-2.5/layer1/Setting.o build/temp.linux-parisc-2.5/layer1/Shaker.o build/temp.linux-parisc-2.5/layer1/Symmetry.o build/temp.linux-parisc-2.5/layer1/Text.o build/temp.linux-parisc-2.5/layer1/TypeFace.o build/temp.linux-parisc-2.5/layer1/Wizard.o build/temp.linux-parisc-2.5/layer1/View.o build/temp.linux-parisc-2.5/layer2/AtomInfo.o build/temp.linux-parisc-2.5/layer2/CoordSet.o build/temp.linux-parisc-2.5/layer2/GadgetSet.o build/temp.linux-parisc-2.5/layer2/DistSet.o build/temp.linux-parisc-2.5/layer2/ObjectAlignment.o build/temp.linux-parisc-2.5/layer2/ObjectCGO.o build/temp.linux-parisc-2.5/layer2/ObjectCallback.o build/temp.linux-parisc-2.5/layer2/ObjectDist.o build/temp.linux-parisc-2.5/layer2/ObjectMap.o build/temp.linux-parisc-2.5/layer2/ObjectMesh.o build/temp.linux-parisc-2.5/layer2/ObjectMolecule.o build/temp.linux-parisc-2.5/layer2/ObjectMolecule2.o build/temp.linux-parisc-2.5/layer2/ObjectSurface.o build/temp.linux-parisc-2.5/layer2/ObjectSlice.o build/temp.linux-parisc-2.5/layer2/RepCartoon.o build/temp.linux-parisc-2.5/layer2/RepCylBond.o build/temp.linux-parisc-2.5/layer2/RepDistDash.o build/temp.linux-parisc-2.5/layer2/RepDistLabel.o build/temp.linux-parisc-2.5/layer2/RepDot.o build/temp.linux-parisc-2.5/layer2/RepLabel.o build/temp.linux-parisc-2.5/layer2/RepMesh.o build/temp.linux-parisc-2.5/layer2/ObjectGadget.o build/temp.linux-parisc-2.5/layer2/ObjectGadgetRamp.o build/temp.linux-parisc-2.5/layer2/ObjectGroup.o build/temp.linux-parisc-2.5/layer2/RepAngle.o build/temp.linux-parisc-2.5/layer2/RepDihedral.o build/temp.linux-parisc-2.5/layer2/RepNonbonded.o build/temp.linux-parisc-2.5/layer2/RepNonbondedSphere.o build/temp.linux-parisc-2.5/layer2/RepRibbon.o build/temp.linux-parisc-2.5/layer2/RepSphere.o build/temp.linux-parisc-2.5/layer2/RepSurface.o build/temp.linux-parisc-2.5/layer2/RepWireBond.o build/temp.linux-parisc-2.5/layer2/Sculpt.o build/temp.linux-parisc-2.5/layer2/SculptCache.o build/temp.linux-parisc-2.5/layer2/VFont.o build/temp.linux-parisc-2.5/layer3/PlugIOManager.o build/temp.linux-parisc-2.5/layer3/Editor.o build/temp.linux-parisc-2.5/layer3/Executive.o build/temp.linux-parisc-2.5/layer3/Seeker.o build/temp.linux-parisc-2.5/layer3/Selector.o build/temp.linux-parisc-2.5/layer4/Cmd.o build/temp.linux-parisc-2.5/layer4/Export.o build/temp.linux-parisc-2.5/layer4/Menu.o build/temp.linux-parisc-2.5/layer4/PopUp.o build/temp.linux-parisc-2.5/layer5/PyMOL.o build/temp.linux-parisc-2.5/layer5/TestPyMOL.o build/temp.linux-parisc-2.5/layer5/main.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/carplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/corplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/cpmdplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.o build/temp.linux-parisc-2.5/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.o -L/usr/X11R6/lib -lGL -lGLU -lglut -lpng -lz -lfreetype -o build/lib.linux-parisc-2.5/pymol/_cmd.so building 'pymol.sglite' extension creating build/temp.linux-parisc-2.5/contrib/sglite gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/runtests.c -o build/temp.linux-parisc-2.5/contrib/sglite/runtests.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgcb.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgcb.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgcharmx.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgcharmx.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgfile.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgfile.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sggen.c -o build/temp.linux-parisc-2.5/contrib/sglite/sggen.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgglobal.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgglobal.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sghall.c -o build/temp.linux-parisc-2.5/contrib/sglite/sghall.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sghkl.c -o build/temp.linux-parisc-2.5/contrib/sglite/sghkl.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sglitemodule.c -o build/temp.linux-parisc-2.5/contrib/sglite/sglitemodule.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgltr.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgltr.o contrib/sglite/sgltr.c: In function 'GetZ2PCBMx': contrib/sglite/sgltr.c:380: warning: passing argument 2 of 'CheckLTrBasis' from incompatible pointer type gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgmath.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgmath.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgmetric.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgmetric.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgnorm.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgnorm.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgprop.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgprop.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgss.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgss.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgstr.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgstr.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgsymbols.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgsymbols.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgtidy.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgtidy.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgtype.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgtype.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -DPythonTypes -Icontrib/sglite -Icontrib/modules -I/usr/include/python2.5 -c contrib/sglite/sgutil.c -o build/temp.linux-parisc-2.5/contrib/sglite/sgutil.o gcc -pthread -shared -Wl,-O1 build/temp.linux-parisc-2.5/contrib/sglite/runtests.o build/temp.linux-parisc-2.5/contrib/sglite/sgcb.o build/temp.linux-parisc-2.5/contrib/sglite/sgcharmx.o build/temp.linux-parisc-2.5/contrib/sglite/sgfile.o build/temp.linux-parisc-2.5/contrib/sglite/sggen.o build/temp.linux-parisc-2.5/contrib/sglite/sgglobal.o build/temp.linux-parisc-2.5/contrib/sglite/sghall.o build/temp.linux-parisc-2.5/contrib/sglite/sghkl.o build/temp.linux-parisc-2.5/contrib/sglite/sglitemodule.o build/temp.linux-parisc-2.5/contrib/sglite/sgltr.o build/temp.linux-parisc-2.5/contrib/sglite/sgmath.o build/temp.linux-parisc-2.5/contrib/sglite/sgmetric.o build/temp.linux-parisc-2.5/contrib/sglite/sgnorm.o build/temp.linux-parisc-2.5/contrib/sglite/sgprop.o build/temp.linux-parisc-2.5/contrib/sglite/sgss.o build/temp.linux-parisc-2.5/contrib/sglite/sgstr.o build/temp.linux-parisc-2.5/contrib/sglite/sgsymbols.o build/temp.linux-parisc-2.5/contrib/sglite/sgtidy.o build/temp.linux-parisc-2.5/contrib/sglite/sgtype.o build/temp.linux-parisc-2.5/contrib/sglite/sgutil.o -o build/lib.linux-parisc-2.5/pymol/sglite.so building 'chempy.champ._champ' extension creating build/temp.linux-parisc-2.5/contrib/champ gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -Icontrib/champ -I/usr/include/python2.5 -c contrib/champ/champ.c -o build/temp.linux-parisc-2.5/contrib/champ/champ.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -Icontrib/champ -I/usr/include/python2.5 -c contrib/champ/champ_module.c -o build/temp.linux-parisc-2.5/contrib/champ/champ_module.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -Icontrib/champ -I/usr/include/python2.5 -c contrib/champ/chiral.c -o build/temp.linux-parisc-2.5/contrib/champ/chiral.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -Icontrib/champ -I/usr/include/python2.5 -c contrib/champ/err2.c -o build/temp.linux-parisc-2.5/contrib/champ/err2.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -Icontrib/champ -I/usr/include/python2.5 -c contrib/champ/feedback2.c -o build/temp.linux-parisc-2.5/contrib/champ/feedback2.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -Icontrib/champ -I/usr/include/python2.5 -c contrib/champ/list.c -o build/temp.linux-parisc-2.5/contrib/champ/list.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -Icontrib/champ -I/usr/include/python2.5 -c contrib/champ/os_memory.c -o build/temp.linux-parisc-2.5/contrib/champ/os_memory.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -Icontrib/champ -I/usr/include/python2.5 -c contrib/champ/sort.c -o build/temp.linux-parisc-2.5/contrib/champ/sort.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -Icontrib/champ -I/usr/include/python2.5 -c contrib/champ/strblock.c -o build/temp.linux-parisc-2.5/contrib/champ/strblock.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -Icontrib/champ -I/usr/include/python2.5 -c contrib/champ/vla.c -o build/temp.linux-parisc-2.5/contrib/champ/vla.o gcc -pthread -shared -Wl,-O1 build/temp.linux-parisc-2.5/contrib/champ/champ.o build/temp.linux-parisc-2.5/contrib/champ/champ_module.o build/temp.linux-parisc-2.5/contrib/champ/chiral.o build/temp.linux-parisc-2.5/contrib/champ/err2.o build/temp.linux-parisc-2.5/contrib/champ/feedback2.o build/temp.linux-parisc-2.5/contrib/champ/list.o build/temp.linux-parisc-2.5/contrib/champ/os_memory.o build/temp.linux-parisc-2.5/contrib/champ/sort.o build/temp.linux-parisc-2.5/contrib/champ/strblock.o build/temp.linux-parisc-2.5/contrib/champ/vla.o -o build/lib.linux-parisc-2.5/chempy/champ/_champ.so building 'pymol.ExtensionClass' extension creating build/temp.linux-parisc-2.5/contrib/modules gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -I/usr/include/python2.5 -c contrib/modules/ExtensionClass.c -o build/temp.linux-parisc-2.5/contrib/modules/ExtensionClass.o contrib/modules/ExtensionClass.c: In function 'initializeBaseExtensionClass': contrib/modules/ExtensionClass.c:1542: warning: passing argument 2 of 'PyMapping_HasKeyString' discards qualifiers from pointer target type contrib/modules/ExtensionClass.c:1553: warning: passing argument 3 of 'newCMethod' discards qualifiers from pointer target type contrib/modules/ExtensionClass.c:1553: warning: passing argument 6 of 'newCMethod' discards qualifiers from pointer target type contrib/modules/ExtensionClass.c:1561: warning: passing argument 3 of 'newCMethod' discards qualifiers from pointer target type contrib/modules/ExtensionClass.c:1561: warning: passing argument 6 of 'newCMethod' discards qualifiers from pointer target type contrib/modules/ExtensionClass.c:1570: warning: passing argument 2 of 'PyMapping_SetItemString' discards qualifiers from pointer target type contrib/modules/ExtensionClass.c:1580: warning: passing argument 2 of 'PyMapping_GetItemString' discards qualifiers from pointer target type contrib/modules/ExtensionClass.c:1583: warning: assignment discards qualifiers from pointer target type contrib/modules/ExtensionClass.c: At top level: contrib/modules/ExtensionClass.c:2872: warning: 'intargfunc' is deprecated contrib/modules/ExtensionClass.c:2873: warning: 'intargfunc' is deprecated contrib/modules/ExtensionClass.c:2874: warning: 'intintargfunc' is deprecated gcc -pthread -shared -Wl,-O1 build/temp.linux-parisc-2.5/contrib/modules/ExtensionClass.o -o build/lib.linux-parisc-2.5/pymol/ExtensionClass.so building 'pymol.opengl.glu._glu_num' extension creating build/temp.linux-parisc-2.5/contrib/pyopengl gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/pyopengl/_glu_nummodule.c -o build/temp.linux-parisc-2.5/contrib/pyopengl/_glu_nummodule.o gcc -pthread -shared -Wl,-O1 build/temp.linux-parisc-2.5/contrib/pyopengl/_glu_nummodule.o -L/usr/X11R6/lib -lGL -lGLU -lglut -o build/lib.linux-parisc-2.5/pymol/opengl/glu/_glu_num.so building 'pymol.opengl.glu._glu' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/pyopengl/_glumodule.c -o build/temp.linux-parisc-2.5/contrib/pyopengl/_glumodule.o gcc -pthread -shared -Wl,-O1 build/temp.linux-parisc-2.5/contrib/pyopengl/_glumodule.o -L/usr/X11R6/lib -lGL -lGLU -lglut -o build/lib.linux-parisc-2.5/pymol/opengl/glu/_glu.so building 'pymol.opengl.glut._glut' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/pyopengl/_glutmodule.c -o build/temp.linux-parisc-2.5/contrib/pyopengl/_glutmodule.o contrib/pyopengl/_glutmodule.c: In function 'glut_glutGameModeString': contrib/pyopengl/_glutmodule.c:1149: warning: unused variable '_res' contrib/pyopengl/_glutmodule.c: In function 'glut_glutEnterGameMode': contrib/pyopengl/_glutmodule.c:1160: warning: unused variable '_res' contrib/pyopengl/_glutmodule.c: In function 'glut_glutLeaveGameMode': contrib/pyopengl/_glutmodule.c:1171: warning: unused variable '_res' gcc -pthread -shared -Wl,-O1 build/temp.linux-parisc-2.5/contrib/pyopengl/_glutmodule.o -L/usr/X11R6/lib -lGL -lGLU -lglut -o build/lib.linux-parisc-2.5/pymol/opengl/glut/_glut.so building 'pymol.opengl.gl._opengl_num' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/pyopengl/_opengl_nummodule.c -o build/temp.linux-parisc-2.5/contrib/pyopengl/_opengl_nummodule.o gcc -pthread -shared -Wl,-O1 build/temp.linux-parisc-2.5/contrib/pyopengl/_opengl_nummodule.o -L/usr/X11R6/lib -lGL -lGLU -lglut -o build/lib.linux-parisc-2.5/pymol/opengl/gl/_opengl_num.so building 'pymol.opengl.gl._opengl' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/pyopengl/_openglmodule.c -o build/temp.linux-parisc-2.5/contrib/pyopengl/_openglmodule.o gcc -pthread -shared -Wl,-O1 build/temp.linux-parisc-2.5/contrib/pyopengl/_openglmodule.o -L/usr/X11R6/lib -lGL -lGLU -lglut -o build/lib.linux-parisc-2.5/pymol/opengl/gl/_opengl.so building 'pymol.opengl.gl.openglutil' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/pyopengl/openglutil.c -o build/temp.linux-parisc-2.5/contrib/pyopengl/openglutil.o gcc -pthread -shared -Wl,-O1 build/temp.linux-parisc-2.5/contrib/pyopengl/openglutil.o -L/usr/X11R6/lib -lGL -lGLU -lglut -o build/lib.linux-parisc-2.5/pymol/opengl/gl/openglutil.so building 'pymol.opengl.gl.openglutil_num' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -O2 -Wall -Wstrict-prototypes -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBPNG -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/include/python2.5 -c contrib/pyopengl/openglutil_num.c -o build/temp.linux-parisc-2.5/contrib/pyopengl/openglutil_num.o gcc -pthread -shared -Wl,-O1 build/temp.linux-parisc-2.5/contrib/pyopengl/openglutil_num.o -L/usr/X11R6/lib -lGL -lGLU -lglut -o build/lib.linux-parisc-2.5/pymol/opengl/gl/openglutil_num.so After running: python setup.py install Please run, to complete the installation: python setup2.py install To uninstall PyMOL, run: python setup2.py uninstall touch build-stamp /usr/bin/fakeroot debian/rules binary-arch dh_testdir dh_testroot dh_clean -k dh_installdirs # Fix some permissions: chmod -x data/chempy/tinker/parm94.dat chmod -x data/pymol/splash.png python setup.py install --prefix /build/buildd/pymol-1.0r2/debian/pymol/usr running install running build running build_py running build_ext running install_lib creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5 creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/cpv.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/xyz.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/io.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/protein_amber.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/gamess1.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/mae.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/mass.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/pdb.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/arc.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/bonds.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/cc1.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/bond_amber.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/protein.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/place.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/charge.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/pkl.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/gms.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/protein_residues.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/lst.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/water_residues.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/water_amber.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/dictdb.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/brick.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/neighbor.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/sdf.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/protein_amber99.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/mmd.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/map.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/cex.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/solvate.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/protein_mmff.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/hetatm.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/models.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/mol.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy copying build/lib.linux-parisc-2.5/chempy/bond_mmff.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bmin copying build/lib.linux-parisc-2.5/chempy/bmin/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bmin copying build/lib.linux-parisc-2.5/chempy/bmin/util.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bmin copying build/lib.linux-parisc-2.5/chempy/bmin/commands.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bmin copying build/lib.linux-parisc-2.5/chempy/bmin/state.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bmin copying build/lib.linux-parisc-2.5/chempy/bmin/realtime.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bmin creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/champ copying build/lib.linux-parisc-2.5/chempy/champ/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/champ copying build/lib.linux-parisc-2.5/chempy/champ/amber99.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/champ copying build/lib.linux-parisc-2.5/chempy/champ/formal_charges.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/champ copying build/lib.linux-parisc-2.5/chempy/champ/assign.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/champ copying build/lib.linux-parisc-2.5/chempy/champ/_champ.so -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/champ creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/fast copying build/lib.linux-parisc-2.5/chempy/fast/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/fast creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/fragments copying build/lib.linux-parisc-2.5/chempy/fragments/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/fragments creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/tinker copying build/lib.linux-parisc-2.5/chempy/tinker/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/tinker copying build/lib.linux-parisc-2.5/chempy/tinker/state.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/tinker copying build/lib.linux-parisc-2.5/chempy/tinker/realtime.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/tinker copying build/lib.linux-parisc-2.5/chempy/tinker/keyword.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/tinker copying build/lib.linux-parisc-2.5/chempy/tinker/amber.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/tinker creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk copying build/lib.linux-parisc-2.5/pmg_tk/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk copying build/lib.linux-parisc-2.5/pmg_tk/Setting.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk copying build/lib.linux-parisc-2.5/pmg_tk/ColorEditor.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk copying build/lib.linux-parisc-2.5/pmg_tk/SetEditor.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk copying build/lib.linux-parisc-2.5/pmg_tk/Demo.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk copying build/lib.linux-parisc-2.5/pmg_tk/PMGApp.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/startup copying build/lib.linux-parisc-2.5/pmg_tk/startup/apbs_tools.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/startup copying build/lib.linux-parisc-2.5/pmg_tk/startup/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/startup copying build/lib.linux-parisc-2.5/pmg_tk/startup/remote_pdb_load.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/startup creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/skins copying build/lib.linux-parisc-2.5/pmg_tk/skins/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/skins creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/skins/normal copying build/lib.linux-parisc-2.5/pmg_tk/skins/normal/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/skins/normal copying build/lib.linux-parisc-2.5/pmg_tk/skins/normal/builder.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/skins/normal creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_wx copying build/lib.linux-parisc-2.5/pmg_wx/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_wx creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/completing.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/creating.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/wizarding.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/moving.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/externing.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/preset.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/importing.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/parsing.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/menu.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/fitting.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/m4x.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/api.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/cgo.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/internal.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/experimenting.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/selecting.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/util.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/feedingback.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/exporting.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/locking.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/controlling.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/editor.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/callback.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/parser.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/vfont.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/keyboard.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/querying.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/contrib.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/cmd.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/keywords.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/invocation.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/viewing.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/commanding.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/checking.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/shortcut.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/constants.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/selector.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/setting.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/movie.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/povray.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/monitoring.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/editing.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/xray.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/rpc.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/helping.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/xwin.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl copying build/lib.linux-parisc-2.5/pymol/opengl/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/gl copying build/lib.linux-parisc-2.5/pymol/opengl/gl/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/gl copying build/lib.linux-parisc-2.5/pymol/opengl/gl/glconst.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/gl copying build/lib.linux-parisc-2.5/pymol/opengl/gl/_opengl_num.so -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/gl copying build/lib.linux-parisc-2.5/pymol/opengl/gl/_opengl.so -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/gl copying build/lib.linux-parisc-2.5/pymol/opengl/gl/openglutil.so -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/gl copying build/lib.linux-parisc-2.5/pymol/opengl/gl/openglutil_num.so -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/gl creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glu copying build/lib.linux-parisc-2.5/pymol/opengl/glu/gluconst.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glu copying build/lib.linux-parisc-2.5/pymol/opengl/glu/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glu copying build/lib.linux-parisc-2.5/pymol/opengl/glu/_glu_num.so -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glu copying build/lib.linux-parisc-2.5/pymol/opengl/glu/_glu.so -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glu creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glut copying build/lib.linux-parisc-2.5/pymol/opengl/glut/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glut copying build/lib.linux-parisc-2.5/pymol/opengl/glut/glutconst.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glut copying build/lib.linux-parisc-2.5/pymol/opengl/glut/_glut.so -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glut creating /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/density.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/label.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/box.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/distance.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/charge.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/benchmark.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/pair_fit.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/appearance.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/__init__.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/fedora.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/renaming.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/stereodemo.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/security.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/sculpting.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/annotation.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/dragging.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/toggle.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/mutagenesis.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/message.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/demo.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/measurement.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/filter.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/wizard/cleanup.py -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard copying build/lib.linux-parisc-2.5/pymol/_cmd.so -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/sglite.so -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol copying build/lib.linux-parisc-2.5/pymol/ExtensionClass.so -> /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/cpv.py to cpv.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/xyz.py to xyz.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/io.py to io.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/protein_amber.py to protein_amber.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/gamess1.py to gamess1.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/mae.py to mae.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/mass.py to mass.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/pdb.py to pdb.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/arc.py to arc.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bonds.py to bonds.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/cc1.py to cc1.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bond_amber.py to bond_amber.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/protein.py to protein.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/place.py to place.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/charge.py to charge.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/pkl.py to pkl.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/gms.py to gms.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/protein_residues.py to protein_residues.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/lst.py to lst.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/water_residues.py to water_residues.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/water_amber.py to water_amber.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/dictdb.py to dictdb.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/brick.py to brick.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/neighbor.py to neighbor.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/sdf.py to sdf.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/protein_amber99.py to protein_amber99.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/mmd.py to mmd.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/map.py to map.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/cex.py to cex.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/solvate.py to solvate.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/protein_mmff.py to protein_mmff.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/hetatm.py to hetatm.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/models.py to models.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/mol.py to mol.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bond_mmff.py to bond_mmff.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bmin/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bmin/util.py to util.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bmin/commands.py to commands.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bmin/state.py to state.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/bmin/realtime.py to realtime.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/champ/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/champ/amber99.py to amber99.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/champ/formal_charges.py to formal_charges.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/champ/assign.py to assign.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/fast/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/fragments/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/tinker/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/tinker/state.py to state.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/tinker/realtime.py to realtime.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/tinker/keyword.py to keyword.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/chempy/tinker/amber.py to amber.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/Setting.py to Setting.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/ColorEditor.py to ColorEditor.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/SetEditor.py to SetEditor.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/Demo.py to Demo.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/PMGApp.py to PMGApp.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/startup/apbs_tools.py to apbs_tools.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/startup/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/startup/remote_pdb_load.py to remote_pdb_load.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/skins/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/skins/normal/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_tk/skins/normal/builder.py to builder.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pmg_wx/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/completing.py to completing.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/creating.py to creating.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizarding.py to wizarding.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/moving.py to moving.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/externing.py to externing.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/preset.py to preset.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/importing.py to importing.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/parsing.py to parsing.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/menu.py to menu.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/fitting.py to fitting.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/m4x.py to m4x.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/api.py to api.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/cgo.py to cgo.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/internal.py to internal.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/experimenting.py to experimenting.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/selecting.py to selecting.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/util.py to util.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/feedingback.py to feedingback.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/exporting.py to exporting.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/locking.py to locking.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/controlling.py to controlling.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/editor.py to editor.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/callback.py to callback.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/parser.py to parser.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/vfont.py to vfont.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/keyboard.py to keyboard.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/querying.py to querying.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/contrib.py to contrib.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/cmd.py to cmd.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/keywords.py to keywords.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/invocation.py to invocation.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/viewing.py to viewing.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/commanding.py to commanding.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/checking.py to checking.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/shortcut.py to shortcut.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/constants.py to constants.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/selector.py to selector.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/setting.py to setting.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/movie.py to movie.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/povray.py to povray.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/monitoring.py to monitoring.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/editing.py to editing.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/xray.py to xray.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/rpc.py to rpc.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/helping.py to helping.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/xwin.py to xwin.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/gl/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/gl/glconst.py to glconst.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glu/gluconst.py to gluconst.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glu/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glut/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/opengl/glut/glutconst.py to glutconst.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/density.py to density.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/label.py to label.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/box.py to box.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/distance.py to distance.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/charge.py to charge.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/benchmark.py to benchmark.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/pair_fit.py to pair_fit.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/appearance.py to appearance.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/__init__.py to __init__.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/fedora.py to fedora.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/renaming.py to renaming.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/stereodemo.py to stereodemo.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/security.py to security.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/sculpting.py to sculpting.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/annotation.py to annotation.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/dragging.py to dragging.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/toggle.py to toggle.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/mutagenesis.py to mutagenesis.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/message.py to message.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/demo.py to demo.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/measurement.py to measurement.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/filter.py to filter.pyc byte-compiling /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol/wizard/cleanup.py to cleanup.pyc running install_egg_info Writing /build/buildd/pymol-1.0r2/debian/pymol/usr/lib/python2.5/site-packages/pymol-1.0.0.egg-info After running: python setup.py install Please run, to complete the installation: python setup2.py install To uninstall PyMOL, run: python setup2.py uninstall find /build/buildd/pymol-1.0r2/debian/pymol/usr -name '*.py[co]' | xargs rm -f install -d /build/buildd/pymol-1.0r2/debian/pymol/usr/bin install -d /build/buildd/pymol-1.0r2/debian/pymol/usr/share/pymol install -d /build/buildd/pymol-1.0r2/debian/pymol/usr/share/pymol/demo install -d /build/buildd/pymol-1.0r2/debian/pymol/usr/share/pymol/pmg_tk/bitmaps/builder install -d /build/buildd/pymol-1.0r2/debian/pymol/usr/share/chempy install -d /build/buildd/pymol-1.0r2/debian/pymol/usr/share/pixmaps install -d /build/buildd/pymol-1.0r2/debian/pymol/usr/share/mime-info install -d /build/buildd/pymol-1.0r2/debian/pymol/usr/share/gnome/apps/Graphics install -d /build/buildd/pymol-1.0r2/debian/pymol/usr/share/applnk/Graphics install -d /build/buildd/pymol-1.0r2/debian/pymol/usr/share/application-registry install -d /build/buildd/pymol-1.0r2/debian/pymol/usr/share/applications install -m 755 debian/pymol.launch /build/buildd/pymol-1.0r2/debian/pymol/usr/bin/pymol cp -ra data/chempy /build/buildd/pymol-1.0r2/debian/pymol/usr/share cp -ra data/pymol /build/buildd/pymol-1.0r2/debian/pymol/usr/share install -m 644 data/demo/* /build/buildd/pymol-1.0r2/debian/pymol/usr/share/pymol/demo #install -m 644 examples/devel/cgo03.py /build/buildd/pymol-1.0r2/debian/pymol/usr/share/pymol/demo install -m 644 data/tut/* /build/buildd/pymol-1.0r2/debian/pymol/usr/share/pymol/demo install -m 644 data/pmg_tk/bitmaps/builder/* /build/buildd/pymol-1.0r2/debian/pymol/usr/share/pymol/pmg_tk/bitmaps/builder cp debian/pymol.xpm /build/buildd/pymol-1.0r2/debian/pymol/usr/share/pixmaps/pymol.xpm cp debian/pymol.desktop /build/buildd/pymol-1.0r2/debian/pymol/usr/share/applications cp debian/gnome-pymol.keys /build/buildd/pymol-1.0r2/debian/pymol/usr/share/mime-info/pymol.keys cp debian/gnome-pymol.mime /build/buildd/pymol-1.0r2/debian/pymol/usr/share/mime-info/pymol.mime cp debian/pymol.applications /build/buildd/pymol-1.0r2/debian/pymol/usr/share/application-registry chmod +x test/pymol-test (cd test && ./run) run_tests: C0001quit... run_tests: C0010hello... run_tests: C0020pdb... run_tests: C0021pdbstr... run_tests: C0025mol... run_tests: C0026sdf... run_tests: C0027mol2... run_tests: C0030pkl... run_tests: C0050multi... run_tests: C0060delete... run_tests: C0070rep... run_tests: C0080create... run_tests: C0100select... run_tests: C0105names... run_tests: C0106order... run_tests: C0140iterate... run_tests: C0150alter... run_tests: C0160get... run_tests: C0170scene... run_tests: C0180embed... run_tests: C0181embed... run_tests: C0200feedback... run_tests: C0201extend... run_tests: C0202help_python... run_tests: C0300session... run_tests: C0500misc... run_tests: C0550pseudo... run_tests: C0600util... run_tests: C0700odd... run_tests: C0740multipdb... run_tests: C0800matrices... run_tests: C1000viewing... run_tests: C1010helping... run_tests: C1020querying... run_tests: C1030selecting... run_tests: C1035wildcards... run_tests: C1040editing... run_tests: C1040editing.log DIFFERS over about 2 lines: ['365c365\n', '< cmd.get_dihedral: 180.000 degrees.\n', '---\n', '> cmd.get_dihedral: -179.983 degrees.\n'] run_tests: C1050fitting... run_tests: C1050fitting.log DIFFERS over about 2 lines: ['43c43\n', '< 7 0.049 0.080 0.384\n', '---\n', '> 7 0.049 0.080 0.385\n'] run_tests: C1060controlling... run_tests: C1070exporting... run_tests: C1080isomore... run_tests: C1090coulomb... run_tests: C1095slice... run_tests: C1100do... run_tests: C1110matrix_mode... run_tests: C1200matrix_maps... run_tests: C2000returns... run_tests: C2000returns.log DIFFERS over about 2 lines: ['57c57\n', "< Color: loaded table '/users/warren/pymol/data/pymol/cmyk.png'.\n", '---\n', "> Color: loaded table '/build/buildd/pymol-1.0r2/data/pymol/cmyk.png'.\n"] dh_testdir dh_testroot dh_installmenu dh_installmime dh_installexamples chmod -x /build/buildd/pymol-1.0r2/debian/pymol/usr/share/doc/pymol/examples/*.pdb chmod -x /build/buildd/pymol-1.0r2/debian/pymol/usr/share/pymol/cmyk.png dh_installdocs -A AUTHORS DEVELOPERS README dh_installchangelogs ChangeLog dh_link dh_pysupport dh_strip dh_strip debug symbol extraction: all non-arch-all packages for this build platform hppa: pymol dh_strip debug symbol extraction: packages to act on: pymol dh_strip debug symbol extraction: ignored packages: dpkg-gencontrol: warning: unknown information field 'C Homepage' in input data in general section of control info file dpkg-gencontrol: warning: unknown information field 'C Vcs-Browser' in input data in general section of control info file dpkg-gencontrol: warning: unknown information field 'C Vcs-Svn' in input data in general section of control info file dpkg-deb: building package `pymol-dbgsym' in `../pymol-dbgsym_1.0r2-1_hppa.ddeb'. dh_compress -Xpdb dh_fixperms dh_installdeb dh_shlibdeps dh_gencontrol dpkg-gencontrol: warning: unknown information field 'C Homepage' in input data in general section of control info file dpkg-gencontrol: warning: unknown information field 'C Vcs-Browser' in input data in general section of control info file dpkg-gencontrol: warning: unknown information field 'C Vcs-Svn' in input data in general section of control info file dh_md5sums dh_builddeb dpkg-deb: building package `pymol' in `../pymol_1.0r2-1_hppa.deb'. dpkg-genchanges -B -mUbuntu/hppa Build Daemon dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20071105-0035 Publishing debug debs. chroot-autobuild/build/buildd/pymol_1.0r2-1_hppa.deb: new debian package, version 2.0. size 6543578 bytes: control archive= 10100 bytes. 1067 bytes, 17 lines control 25628 bytes, 326 lines md5sums 754 bytes, 22 lines * postinst #!/bin/sh 293 bytes, 8 lines * postrm #!/bin/sh 374 bytes, 12 lines * prerm #!/bin/sh Package: pymol Version: 1.0r2-1 Architecture: hppa Maintainer: Debichem Team Installed-Size: 16496 Depends: python (>= 2.5), python-support (>= 0.7.1), python (<< 2.6), freeglut3, libc6 (>= 2.6.1-1), libfreetype6 (>= 2.3.5), libgcc4 (>= 4.2.1), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.2.1), zlib1g (>= 1:1.2.3.3.dfsg-1), python-tk, python-pmw Recommends: apbs Section: science Priority: optional Description: An OpenGL Molecular Graphics System written in Python PyMOL is a molecular graphics system with an embedded Python interpreter designed for real-time visualization and rapid generation of high-quality molecular graphics images and animations. It is fully extensible and available free to everyone via the "Python" license. Although a newcomer to the field, PyMOL can already be used to generate stunning images and animations with unprecedented ease. It can also perform many other valuable tasks (such as editing PDB files) to assist you in your research. chroot-autobuild/build/buildd/pymol_1.0r2-1_hppa.deb: drwxr-xr-x root/root 0 2007-11-05 00:34:56 ./ drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/ drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/ drwxr-xr-x root/root 0 2007-10-07 15:39:44 ./usr/share/pymol/ drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/pymol/demo/ -rw-r--r-- root/root 343298 2007-11-05 00:33:01 ./usr/share/pymol/demo/1hpv.r3d -rw-r--r-- root/root 496044 2007-11-05 00:33:01 ./usr/share/pymol/demo/1tii.pdb -rw-r--r-- root/root 2066 2007-11-05 00:33:01 ./usr/share/pymol/demo/cgo03.py -rw-r--r-- root/root 168966 2007-11-05 00:33:01 ./usr/share/pymol/demo/il2.pdb -rw-r--r-- root/root 8457 2007-11-05 00:33:01 ./usr/share/pymol/demo/pept.pdb -rw-r--r-- root/root 56865 2007-11-05 00:33:01 ./usr/share/pymol/demo/pept.pkl -rw-r--r-- root/root 150174 2007-11-05 00:33:01 ./usr/share/pymol/demo/1hpv.pdb drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/ drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/ drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/ -rw-r--r-- root/root 130 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/aro5.gif -rw-r--r-- root/root 328 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/aro5.xbm -rw-r--r-- root/root 139 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/aro6.gif -rw-r--r-- root/root 319 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/aro6.xbm -rw-r--r-- root/root 127 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/cyc4.gif -rw-r--r-- root/root 319 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/cyc4.xbm -rw-r--r-- root/root 123 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/cyc5.gif -rw-r--r-- root/root 322 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/cyc5.xbm -rw-r--r-- root/root 129 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/cyc6.gif -rw-r--r-- root/root 319 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/cyc6.xbm -rw-r--r-- root/root 129 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/cyc7.gif -rw-r--r-- root/root 313 2007-11-05 00:33:01 ./usr/share/pymol/pmg_tk/bitmaps/builder/cyc7.xbm drwxr-xr-x root/root 0 2007-10-07 15:39:42 ./usr/share/pymol/matrices/ -rw-r--r-- root/root 2122 2002-10-06 18:53:12 ./usr/share/pymol/matrices/BLOSUM62 -rw-r--r-- root/root 255652 2003-05-19 08:00:02 ./usr/share/pymol/cmyk.png -rw-r--r-- root/root 366744 2007-06-07 00:04:46 ./usr/share/pymol/splash.png drwxr-xr-x root/root 0 2007-10-07 15:39:49 ./usr/share/chempy/ drwxr-xr-x root/root 0 2007-10-07 15:39:46 ./usr/share/chempy/fragments/ -rw-r--r-- root/root 3697 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_thr.pkl -rw-r--r-- root/root 1997 2002-10-07 00:06:41 ./usr/share/chempy/fragments/ala.pkl -rw-r--r-- root/root 5637 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_arg.pkl -rw-r--r-- root/root 3599 2006-10-28 07:25:51 ./usr/share/chempy/fragments/gluh.pkl -rw-r--r-- root/root 2418 2002-10-07 00:06:41 ./usr/share/chempy/fragments/cyclobutane.pkl -rw-r--r-- root/root 4817 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_phe.pkl -rw-r--r-- root/root 4377 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_hid.pkl -rw-r--r-- root/root 4377 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_hie.pkl -rw-r--r-- root/root 4983 2006-10-28 07:25:51 ./usr/share/chempy/fragments/lys.pkl -rw-r--r-- root/root 4591 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_hip.pkl -rw-r--r-- root/root 3597 2002-10-07 00:06:41 ./usr/share/chempy/fragments/ile.pkl -rw-r--r-- root/root 4007 2002-10-07 00:06:41 ./usr/share/chempy/fragments/tyr.pkl -rw-r--r-- root/root 4029 2002-10-07 00:06:41 ./usr/share/chempy/fragments/cycloheptane.pkl -rw-r--r-- root/root 3231 2002-10-07 00:06:41 ./usr/share/chempy/fragments/gln.pkl -rw-r--r-- root/root 2955 2002-10-07 00:06:41 ./usr/share/chempy/fragments/cyclopentane.pkl -rw-r--r-- root/root 3681 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_asn.pkl -rw-r--r-- root/root 3485 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_thr.pkl -rw-r--r-- root/root 4134 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_val.pkl -rw-r--r-- root/root 1327 2002-10-07 00:06:41 ./usr/share/chempy/fragments/formamide.pkl -rw-r--r-- root/root 3260 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_asp.pkl -rw-r--r-- root/root 4377 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_his.pkl -rw-r--r-- root/root 4784 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_leu.pkl -rw-r--r-- root/root 3475 2006-10-28 07:25:51 ./usr/share/chempy/fragments/glu.pkl -rw-r--r-- root/root 4165 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_hid.pkl -rw-r--r-- root/root 1492 2002-10-07 00:06:41 ./usr/share/chempy/fragments/gly.pkl -rw-r--r-- root/root 4165 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_hie.pkl -rw-r--r-- root/root 3394 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_asph.pkl -rw-r--r-- root/root 2827 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_ala.pkl -rw-r--r-- root/root 2731 2002-10-07 00:06:41 ./usr/share/chempy/fragments/pro.pkl -rw-r--r-- root/root 4379 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_hip.pkl -rw-r--r-- root/root 4523 2002-10-07 00:06:41 ./usr/share/chempy/fragments/trp.pkl -rw-r--r-- root/root 2239 2002-10-07 00:06:41 ./usr/share/chempy/fragments/cyclopentadiene.pkl -rw-r--r-- root/root 3469 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_asn.pkl -rw-r--r-- root/root 3922 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_val.pkl -rw-r--r-- root/root 5418 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_lys.pkl -rw-r--r-- root/root 3048 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_asp.pkl -rw-r--r-- root/root 968 2002-10-07 00:06:41 ./usr/share/chempy/fragments/acetylene.pkl -rw-r--r-- root/root 4165 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_his.pkl -rw-r--r-- root/root 4787 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_ile.pkl -rw-r--r-- root/root 4572 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_leu.pkl -rw-r--r-- root/root 1145 2002-10-07 00:06:41 ./usr/share/chempy/fragments/sulfone.pkl -rw-r--r-- root/root 5333 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_tyr.pkl -rw-r--r-- root/root 4331 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_gln.pkl -rw-r--r-- root/root 2615 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_ala.pkl -rw-r--r-- root/root 3232 2002-10-07 00:06:41 ./usr/share/chempy/fragments/met.pkl -rw-r--r-- root/root 5053 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_lysn.pkl -rw-r--r-- root/root 5474 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_argn.pkl -rw-r--r-- root/root 3910 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_glu.pkl -rw-r--r-- root/root 2172 2002-10-07 00:06:41 ./usr/share/chempy/fragments/ser.pkl -rw-r--r-- root/root 2227 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_gly.pkl -rw-r--r-- root/root 5206 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_lys.pkl -rw-r--r-- root/root 2172 2002-10-07 00:06:41 ./usr/share/chempy/fragments/cys.pkl -rw-r--r-- root/root 4575 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_ile.pkl -rw-r--r-- root/root 4023 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_gluh.pkl -rw-r--r-- root/root 3729 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_pro.pkl -rw-r--r-- root/root 3492 2002-10-07 00:06:41 ./usr/share/chempy/fragments/cyclohexane.pkl -rw-r--r-- root/root 5114 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_tyr.pkl -rw-r--r-- root/root 4119 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_gln.pkl -rw-r--r-- root/root 5949 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_trp.pkl -rw-r--r-- root/root 5414 2006-10-28 07:25:51 ./usr/share/chempy/fragments/arg.pkl -rw-r--r-- root/root 3789 2002-10-07 00:06:41 ./usr/share/chempy/fragments/phe.pkl -rw-r--r-- root/root 888 2006-11-01 15:29:30 ./usr/share/chempy/fragments/nhh.pkl -rw-r--r-- root/root 1554 2005-03-20 19:12:41 ./usr/share/chempy/fragments/ethylene.pkl -rw-r--r-- root/root 3698 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_glu.pkl -rw-r--r-- root/root 2786 2002-10-07 00:06:41 ./usr/share/chempy/fragments/butane.pkl -rw-r--r-- root/root 1130 2002-10-07 00:06:41 ./usr/share/chempy/fragments/methane.pkl -rw-r--r-- root/root 3183 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_asph.pkl -rw-r--r-- root/root 2008 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_gly.pkl -rw-r--r-- root/root 2418 2002-10-07 00:06:41 ./usr/share/chempy/fragments/benzene.pkl -rw-r--r-- root/root 3523 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_pro.pkl -rw-r--r-- root/root 4340 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_met.pkl -rw-r--r-- root/root 1301 2002-10-07 00:06:41 ./usr/share/chempy/fragments/ace.pkl -rw-r--r-- root/root 3042 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_ser.pkl -rw-r--r-- root/root 72534 2002-10-07 00:06:41 ./usr/share/chempy/fragments/peptide.pkl -rw-r--r-- root/root 5719 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_trp.pkl -rw-r--r-- root/root 2970 2006-10-28 07:25:51 ./usr/share/chempy/fragments/asph.pkl -rw-r--r-- root/root 2707 2002-10-07 00:06:41 ./usr/share/chempy/fragments/thr.pkl -rw-r--r-- root/root 3042 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_cys.pkl -rw-r--r-- root/root 2051 2002-10-07 00:06:41 ./usr/share/chempy/fragments/realtime.pkl -rw-r--r-- root/root 957 2002-10-07 00:06:41 ./usr/share/chempy/fragments/formaldehyde.pkl -rw-r--r-- root/root 3259 2002-10-07 00:06:41 ./usr/share/chempy/fragments/hid.pkl -rw-r--r-- root/root 3259 2002-10-07 00:06:41 ./usr/share/chempy/fragments/hie.pkl -rw-r--r-- root/root 5849 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_arg.pkl -rw-r--r-- root/root 4842 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_lysn.pkl -rw-r--r-- root/root 4128 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_met.pkl -rw-r--r-- root/root 5263 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_argn.pkl -rw-r--r-- root/root 5029 2006-10-28 07:25:51 ./usr/share/chempy/fragments/nt_phe.pkl -rw-r--r-- root/root 1307 2002-10-07 00:06:41 ./usr/share/chempy/fragments/nme.pkl -rw-r--r-- root/root 2830 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_ser.pkl -rw-r--r-- root/root 3507 2002-10-07 00:06:41 ./usr/share/chempy/fragments/hip.pkl -rw-r--r-- root/root 2701 2002-10-07 00:06:41 ./usr/share/chempy/fragments/asn.pkl -rw-r--r-- root/root 3064 2002-10-07 00:06:41 ./usr/share/chempy/fragments/val.pkl -rw-r--r-- root/root 3259 2002-10-07 00:06:41 ./usr/share/chempy/fragments/his.pkl -rw-r--r-- root/root 2825 2006-10-28 07:25:51 ./usr/share/chempy/fragments/asp.pkl -rw-r--r-- root/root 2830 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_cys.pkl -rw-r--r-- root/root 4629 2006-10-28 07:25:51 ./usr/share/chempy/fragments/lysn.pkl -rw-r--r-- root/root 3594 2002-10-07 00:06:41 ./usr/share/chempy/fragments/leu.pkl -rw-r--r-- root/root 3812 2006-10-28 07:25:51 ./usr/share/chempy/fragments/ct_gluh.pkl -rw-r--r-- root/root 5050 2006-10-28 07:25:51 ./usr/share/chempy/fragments/argn.pkl drwxr-xr-x root/root 0 2007-10-07 15:39:49 ./usr/share/chempy/sidechains/ -rw-r--r-- root/root 1458700 2005-10-31 07:17:50 ./usr/share/chempy/sidechains/sc_bb_dep.pkl -rw-r--r-- root/root 4963 2005-08-02 00:22:51 ./usr/share/chempy/sidechains/generate1.py -rw-r--r-- root/root 4225 2005-08-02 00:22:51 ./usr/share/chempy/sidechains/generate2.py -rw-r--r-- root/root 19885 2005-10-31 07:17:50 ./usr/share/chempy/sidechains/sc_bb_ind.pkl -rw-r--r-- root/root 4774 2005-10-31 07:17:50 ./usr/share/chempy/sidechains/sc_bb_dep.py -rw-r--r-- root/root 28305 2002-10-06 23:58:52 ./usr/share/chempy/sidechains/sc_library.pkl -rw-r--r-- root/root 3747 2005-10-31 07:17:50 ./usr/share/chempy/sidechains/sc_bb_ind.py drwxr-xr-x root/root 0 2007-10-07 15:39:50 ./usr/share/chempy/tinker/ -rw-r--r-- root/root 108364 2002-10-06 18:53:12 ./usr/share/chempy/tinker/parm99_simple.dat -rw-r--r-- root/root 161 2007-03-19 06:08:15 ./usr/share/chempy/tinker/Makefile.delsci -rw-r--r-- root/root 5500 2002-10-06 18:53:12 ./usr/share/chempy/tinker/make99_simple.py -rw-r--r-- root/root 59099 2002-10-06 18:53:12 ./usr/share/chempy/tinker/parm_simple.dat -rw-r--r-- root/root 47187 2002-10-06 18:53:12 ./usr/share/chempy/tinker/parm94_rsm.dat -rw-r--r-- root/root 42843 2002-10-06 18:53:12 ./usr/share/chempy/tinker/chempy.prm -rw-r--r-- root/root 27556 2002-10-06 18:53:12 ./usr/share/chempy/tinker/parm94.dat -rw-r--r-- root/root 46619 2002-10-06 18:53:12 ./usr/share/chempy/tinker/parm96_rsm.dat -rw-r--r-- root/root 29981 2002-10-06 18:53:12 ./usr/share/chempy/tinker/parm96.dat -rw-r--r-- root/root 47278 2002-10-06 18:53:12 ./usr/share/chempy/tinker/make_simple.py -rw-r--r-- root/root 44014 2002-10-06 18:53:12 ./usr/share/chempy/tinker/parm99.dat -rw-r--r-- root/root 54430 2002-10-06 18:53:12 ./usr/share/chempy/tinker/parm_simple.inp -rw-r--r-- root/root 50431 2002-10-06 18:53:12 ./usr/share/chempy/tinker/parm99_wld.dat -rw-r--r-- root/root 35752 2002-10-06 18:53:12 ./usr/share/chempy/water.pdb drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/pixmaps/ -rw-r--r-- root/root 7115 2007-11-05 00:33:01 ./usr/share/pixmaps/pymol.xpm drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/mime-info/ -rw-r--r-- root/root 351 2007-11-05 00:33:01 ./usr/share/mime-info/pymol.keys -rw-r--r-- root/root 26 2007-11-05 00:33:01 ./usr/share/mime-info/pymol.mime drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/gnome/ drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/gnome/apps/ drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/gnome/apps/Graphics/ drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/applnk/ drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/applnk/Graphics/ drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/application-registry/ -rw-r--r-- root/root 117 2007-11-05 00:33:01 ./usr/share/application-registry/pymol.applications drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/share/applications/ -rw-r--r-- root/root 440 2007-11-05 00:33:01 ./usr/share/applications/pymol.desktop drwxr-xr-x root/root 0 2007-11-05 00:34:33 ./usr/share/menu/ -rw-r--r-- root/root 206 2007-11-05 00:13:51 ./usr/share/menu/pymol drwxr-xr-x root/root 0 2007-11-05 00:34:34 ./usr/share/doc/ drwxr-xr-x root/root 0 2007-11-05 00:34:56 ./usr/share/doc/pymol/ drwxr-xr-x root/root 0 2007-11-05 00:34:34 ./usr/share/doc/pymol/examples/ -rw-r--r-- root/root 496044 2001-12-08 18:43:40 ./usr/share/doc/pymol/examples/1tii.pdb -rw-r--r-- root/root 138996 2000-09-12 10:48:30 ./usr/share/doc/pymol/examples/3al1.pdb -rw-r--r-- root/root 25872 2000-09-16 22:33:54 ./usr/share/doc/pymol/examples/helix_amber.pdb -rw-r--r-- root/root 168966 2000-09-12 10:48:30 ./usr/share/doc/pymol/examples/il2.pdb -rw-r--r-- root/root 6826 2002-09-07 08:39:07 ./usr/share/doc/pymol/examples/names.pdb -rw-r--r-- root/root 1537 2005-07-20 00:33:09 ./usr/share/doc/pymol/examples/odd01.pdb -rw-r--r-- root/root 2772 2005-10-18 19:22:19 ./usr/share/doc/pymol/examples/odd02.pdb -rw-r--r-- root/root 8457 2001-04-21 03:54:13 ./usr/share/doc/pymol/examples/pept.pdb -rw-r--r-- root/root 4144 2004-02-09 20:45:52 ./usr/share/doc/pymol/examples/small02.pdb -rw-r--r-- root/root 3305 2001-03-17 20:59:05 ./usr/share/doc/pymol/examples/tiny.pdb -rw-r--r-- root/root 35752 2000-09-17 02:11:14 ./usr/share/doc/pymol/examples/water.pdb -rw-r--r-- root/root 426 2007-11-05 00:13:56 ./usr/share/doc/pymol/examples/generate_amber.py -rw-r--r-- root/root 774 2007-11-05 00:13:56 ./usr/share/doc/pymol/examples/generate_mmff.py -rw-r--r-- root/root 1004 2007-11-05 00:13:56 ./usr/share/doc/pymol/examples/povray01.py -rw-r--r-- root/root 25 2007-03-19 06:11:02 ./usr/share/doc/pymol/AUTHORS -rw-r--r-- root/root 3608 2006-02-04 16:52:36 ./usr/share/doc/pymol/DEVELOPERS -rw-r--r-- root/root 478 2007-11-05 00:13:51 ./usr/share/doc/pymol/README.Debian -rw-r--r-- root/root 2745 2007-11-05 00:13:51 ./usr/share/doc/pymol/copyright -rw-r--r-- root/root 28144 2007-09-10 02:06:33 ./usr/share/doc/pymol/changelog.gz -rw-r--r-- root/root 3900 2007-03-19 06:11:02 ./usr/share/doc/pymol/README.gz -rw-r--r-- root/root 4267 2007-11-05 00:13:51 ./usr/share/doc/pymol/changelog.Debian.gz drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/ drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/ drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/pmg_tk/ drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/pmg_tk/skins/ drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/pmg_tk/skins/normal/ -rw-r--r-- root/root 121803 2007-06-21 19:17:14 ./usr/share/python-support/pymol/pmg_tk/skins/normal/__init__.py -rw-r--r-- root/root 16628 2006-10-30 19:25:56 ./usr/share/python-support/pymol/pmg_tk/skins/normal/builder.py -rw-r--r-- root/root 433 2005-06-03 02:27:07 ./usr/share/python-support/pymol/pmg_tk/skins/__init__.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/pmg_tk/startup/ -rw-r--r-- root/root 4088 2007-02-08 18:47:54 ./usr/share/python-support/pymol/pmg_tk/startup/remote_pdb_load.py -rw-r--r-- root/root 98781 2006-01-13 03:45:52 ./usr/share/python-support/pymol/pmg_tk/startup/apbs_tools.py -rw-r--r-- root/root 1454 2004-05-17 07:11:28 ./usr/share/python-support/pymol/pmg_tk/startup/__init__.py -rw-r--r-- root/root 92 2003-05-31 23:38:00 ./usr/share/python-support/pymol/pmg_tk/Demo.py -rw-r--r-- root/root 1408 2006-02-05 02:32:55 ./usr/share/python-support/pymol/pmg_tk/__init__.py -rw-r--r-- root/root 8916 2007-02-08 18:47:54 ./usr/share/python-support/pymol/pmg_tk/PMGApp.py -rw-r--r-- root/root 4956 2005-06-03 02:27:07 ./usr/share/python-support/pymol/pmg_tk/ColorEditor.py -rw-r--r-- root/root 21006 2007-05-07 03:58:36 ./usr/share/python-support/pymol/pmg_tk/Setting.py -rw-r--r-- root/root 5172 2006-04-20 20:59:37 ./usr/share/python-support/pymol/pmg_tk/SetEditor.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/chempy/ drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/chempy/tinker/ -rw-r--r-- root/root 33943 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/tinker/amber.py -rw-r--r-- root/root 5367 2007-11-05 00:13:56 ./usr/share/python-support/pymol/chempy/tinker/__init__.py -rw-r--r-- root/root 1896 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/tinker/keyword.py -rw-r--r-- root/root 9373 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/tinker/state.py -rw-r--r-- root/root 5925 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/tinker/realtime.py -rw-r--r-- root/root 140662 2002-12-18 17:09:23 ./usr/share/python-support/pymol/chempy/protein_residues.py -rw-r--r-- root/root 4768 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/bond_amber.py -rw-r--r-- root/root 4213 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/bond_mmff.py -rw-r--r-- root/root 25463 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/models.py -rw-r--r-- root/root 2043 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/solvate.py -rw-r--r-- root/root 1370 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/brick.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/chempy/bmin/ -rw-r--r-- root/root 3213 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/bmin/realtime.py -rw-r--r-- root/root 1244 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/bmin/commands.py -rw-r--r-- root/root 1419 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/bmin/__init__.py -rw-r--r-- root/root 1619 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/bmin/util.py -rw-r--r-- root/root 3125 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/bmin/state.py -rw-r--r-- root/root 2496 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/neighbor.py -rw-r--r-- root/root 83148 2002-12-18 17:09:23 ./usr/share/python-support/pymol/chempy/protein_amber99.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/chempy/champ/ -rw-r--r-- root/root 77058 2005-09-27 01:21:35 ./usr/share/python-support/pymol/chempy/champ/amber99.py -rw-r--r-- root/root 5785 2005-09-27 01:21:35 ./usr/share/python-support/pymol/chempy/champ/formal_charges.py -rw-r--r-- root/root 9454 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/champ/__init__.py -rw-r--r-- root/root 9071 2006-12-17 18:41:14 ./usr/share/python-support/pymol/chempy/champ/assign.py -rw-r--r-- root/root 1197 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/lst.py -rw-r--r-- root/root 22588 2005-08-26 04:22:40 ./usr/share/python-support/pymol/chempy/gamess1.py -rw-r--r-- root/root 3096 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/xyz.py -rw-r--r-- root/root 15586 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/__init__.py -rw-r--r-- root/root 14003 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/place.py -rw-r--r-- root/root 25285 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/dictdb.py -rw-r--r-- root/root 7610 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/mmd.py -rw-r--r-- root/root 1100 2002-12-18 17:09:23 ./usr/share/python-support/pymol/chempy/water_amber.py -rw-r--r-- root/root 8113 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/hetatm.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/chempy/fragments/ -rw-r--r-- root/root 134 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/fragments/__init__.py -rw-r--r-- root/root 24824 2002-12-18 17:02:39 ./usr/share/python-support/pymol/chempy/bonds.py -rw-r--r-- root/root 1454 2002-12-18 17:09:23 ./usr/share/python-support/pymol/chempy/water_residues.py -rw-r--r-- root/root 2195 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/cc1.py -rw-r--r-- root/root 1509 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/mass.py -rw-r--r-- root/root 12990 2006-02-23 16:52:36 ./usr/share/python-support/pymol/chempy/cpv.py -rw-r--r-- root/root 2062 2007-03-05 17:21:12 ./usr/share/python-support/pymol/chempy/pkl.py -rw-r--r-- root/root 17584 2007-11-05 00:13:56 ./usr/share/python-support/pymol/chempy/cex.py -rw-r--r-- root/root 3799 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/pdb.py -rw-r--r-- root/root 5315 2006-02-17 02:43:04 ./usr/share/python-support/pymol/chempy/sdf.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/chempy/fast/ -rw-r--r-- root/root 5049 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/fast/__init__.py -rw-r--r-- root/root 3133 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/gms.py -rw-r--r-- root/root 75537 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/protein_mmff.py -rw-r--r-- root/root 1376 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/arc.py -rw-r--r-- root/root 1230 2002-12-18 17:09:23 ./usr/share/python-support/pymol/chempy/io.py -rw-r--r-- root/root 4622 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/mol.py -rw-r--r-- root/root 19224 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/protein.py -rw-r--r-- root/root 1924 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/map.py -rw-r--r-- root/root 4225 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/charge.py -rw-r--r-- root/root 83112 2002-12-18 17:09:23 ./usr/share/python-support/pymol/chempy/protein_amber.py -rw-r--r-- root/root 12736 2005-06-03 02:27:07 ./usr/share/python-support/pymol/chempy/mae.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/pymol/ drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/pymol/opengl/ -rw-r--r-- root/root 154 2001-02-26 11:40:53 ./usr/share/python-support/pymol/pymol/opengl/__init__.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/pymol/opengl/gl/ -rw-r--r-- root/root 15269 2001-02-24 12:11:45 ./usr/share/python-support/pymol/pymol/opengl/gl/glconst.py -rw-r--r-- root/root 3194 2005-06-03 02:27:07 ./usr/share/python-support/pymol/pymol/opengl/gl/__init__.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/pymol/opengl/glut/ -rw-r--r-- root/root 375 2001-02-24 12:11:45 ./usr/share/python-support/pymol/pymol/opengl/glut/__init__.py -rw-r--r-- root/root 3451 2001-02-24 12:11:45 ./usr/share/python-support/pymol/pymol/opengl/glut/glutconst.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/pymol/opengl/glu/ -rw-r--r-- root/root 3170 2001-02-24 12:11:45 ./usr/share/python-support/pymol/pymol/opengl/glu/gluconst.py -rw-r--r-- root/root 1017 2001-02-24 12:11:45 ./usr/share/python-support/pymol/pymol/opengl/glu/__init__.py -rw-r--r-- root/root 12738 2007-06-21 19:17:14 ./usr/share/python-support/pymol/pymol/commanding.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/pymol/wizard/ -rw-r--r-- root/root 2783 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/label.py -rw-r--r-- root/root 9122 2007-05-05 22:51:34 ./usr/share/python-support/pymol/pymol/wizard/appearance.py -rw-r--r-- root/root 871 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/fedora.py -rw-r--r-- root/root 1287 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/__init__.py -rw-r--r-- root/root 1934 2007-05-05 22:51:34 ./usr/share/python-support/pymol/pymol/wizard/security.py -rw-r--r-- root/root 29932 2007-11-05 00:13:56 ./usr/share/python-support/pymol/pymol/wizard/mutagenesis.py -rw-r--r-- root/root 6512 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/pair_fit.py -rw-r--r-- root/root 2622 2007-05-05 22:51:34 ./usr/share/python-support/pymol/pymol/wizard/annotation.py -rw-r--r-- root/root 12073 2007-05-05 22:51:34 ./usr/share/python-support/pymol/pymol/wizard/charge.py -rw-r--r-- root/root 9799 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/measurement.py -rw-r--r-- root/root 6495 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/distance.py -rw-r--r-- root/root 1290 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/toggle.py -rw-r--r-- root/root 6560 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/sculpting.py -rw-r--r-- root/root 15266 2007-05-05 22:51:34 ./usr/share/python-support/pymol/pymol/wizard/box.py -rw-r--r-- root/root 11456 2007-05-21 17:53:32 ./usr/share/python-support/pymol/pymol/wizard/benchmark.py -rw-r--r-- root/root 892 2007-07-24 02:40:58 ./usr/share/python-support/pymol/pymol/wizard/message.py -rw-r--r-- root/root 17787 2007-11-05 00:13:56 ./usr/share/python-support/pymol/pymol/wizard/demo.py -rw-r--r-- root/root 9339 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/density.py -rw-r--r-- root/root 5347 2007-05-05 22:51:34 ./usr/share/python-support/pymol/pymol/wizard/cleanup.py -rw-r--r-- root/root 2549 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/dragging.py -rw-r--r-- root/root 16241 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/stereodemo.py -rw-r--r-- root/root 11943 2007-05-05 04:19:27 ./usr/share/python-support/pymol/pymol/wizard/filter.py -rw-r--r-- root/root 1126 2007-05-05 04:19:57 ./usr/share/python-support/pymol/pymol/wizard/renaming.py -rw-r--r-- root/root 42518 2007-06-19 02:19:26 ./usr/share/python-support/pymol/pymol/util.py -rw-r--r-- root/root 15018 2007-05-24 01:35:40 ./usr/share/python-support/pymol/pymol/internal.py -rw-r--r-- root/root 14996 2007-08-29 22:21:01 ./usr/share/python-support/pymol/pymol/invocation.py -rw-r--r-- root/root 10331 2007-05-30 21:08:03 ./usr/share/python-support/pymol/pymol/completing.py -rw-r--r-- root/root 41808 2007-06-21 04:11:39 ./usr/share/python-support/pymol/pymol/importing.py -rw-r--r-- root/root 16444 2007-11-05 00:13:56 ./usr/share/python-support/pymol/pymol/__init__.py -rw-r--r-- root/root 14823 2007-11-05 00:13:56 ./usr/share/python-support/pymol/pymol/fitting.py -rw-r--r-- root/root 47014 2007-07-02 17:37:12 ./usr/share/python-support/pymol/pymol/setting.py -rw-r--r-- root/root 6614 2007-06-21 04:11:39 ./usr/share/python-support/pymol/pymol/wizarding.py -rw-r--r-- root/root 7201 2007-05-05 22:51:34 ./usr/share/python-support/pymol/pymol/movie.py -rw-r--r-- root/root 1490 2007-11-05 00:13:55 ./usr/share/python-support/pymol/pymol/povray.py -rw-r--r-- root/root 12753 2007-05-05 22:51:34 ./usr/share/python-support/pymol/pymol/cgo.py -rw-r--r-- root/root 817 2007-05-05 01:51:06 ./usr/share/python-support/pymol/pymol/checking.py -rw-r--r-- root/root 627 2007-05-07 08:12:00 ./usr/share/python-support/pymol/pymol/monitoring.py -rw-r--r-- root/root 12852 2007-06-21 04:11:39 ./usr/share/python-support/pymol/pymol/exporting.py -rw-r--r-- root/root 7577 2007-06-21 04:11:39 ./usr/share/python-support/pymol/pymol/experimenting.py -rw-r--r-- root/root 6115 2007-06-21 04:11:39 ./usr/share/python-support/pymol/pymol/selecting.py -rw-r--r-- root/root 10338 2007-07-09 03:38:03 ./usr/share/python-support/pymol/pymol/api.py -rw-r--r-- root/root 3806 2006-01-20 03:03:49 ./usr/share/python-support/pymol/pymol/selector.py -rw-r--r-- root/root 14847 2007-05-05 01:51:06 ./usr/share/python-support/pymol/pymol/m4x.py -rw-r--r-- root/root 608 2005-06-03 02:27:07 ./usr/share/python-support/pymol/pymol/callback.py -rw-r--r-- root/root 17682 2007-06-21 04:11:39 ./usr/share/python-support/pymol/pymol/moving.py -rw-r--r-- root/root 23247 2007-07-24 02:40:58 ./usr/share/python-support/pymol/pymol/controlling.py -rw-r--r-- root/root 3580 2007-05-06 01:28:19 ./usr/share/python-support/pymol/pymol/locking.py -rw-r--r-- root/root 11081 2007-05-07 03:27:41 ./usr/share/python-support/pymol/pymol/cmd.py -rw-r--r-- root/root 2159 2005-06-03 02:27:07 ./usr/share/python-support/pymol/pymol/contrib.py -rw-r--r-- root/root 77335 2007-07-09 03:38:03 ./usr/share/python-support/pymol/pymol/viewing.py -rw-r--r-- root/root 27381 2007-05-05 22:51:34 ./usr/share/python-support/pymol/pymol/parsing.py -rw-r--r-- root/root 12926 2006-07-09 22:16:46 ./usr/share/python-support/pymol/pymol/rpc.py -rw-r--r-- root/root 562 2005-06-03 02:27:07 ./usr/share/python-support/pymol/pymol/xwin.py -rw-r--r-- root/root 5381 2007-06-05 19:18:52 ./usr/share/python-support/pymol/pymol/feedingback.py -rw-r--r-- root/root 9353 2006-11-01 16:01:40 ./usr/share/python-support/pymol/pymol/editor.py -rw-r--r-- root/root 26077 2007-06-21 04:11:39 ./usr/share/python-support/pymol/pymol/helping.py -rw-r--r-- root/root 11263 2007-05-06 19:35:53 ./usr/share/python-support/pymol/pymol/constants.py -rw-r--r-- root/root 61917 2007-07-09 03:38:03 ./usr/share/python-support/pymol/pymol/editing.py -rw-r--r-- root/root 2966 2007-05-30 21:08:03 ./usr/share/python-support/pymol/pymol/xray.py -rw-r--r-- root/root 12886 2007-05-04 02:32:25 ./usr/share/python-support/pymol/pymol/keyboard.py -rw-r--r-- root/root 27946 2007-07-10 22:43:56 ./usr/share/python-support/pymol/pymol/creating.py -rw-r--r-- root/root 28253 2007-06-21 04:11:39 ./usr/share/python-support/pymol/pymol/keywords.py -rw-r--r-- root/root 8081 2007-05-06 00:56:34 ./usr/share/python-support/pymol/pymol/shortcut.py -rw-r--r-- root/root 34769 2007-05-05 22:51:34 ./usr/share/python-support/pymol/pymol/parser.py -rw-r--r-- root/root 13816 2007-05-05 22:51:34 ./usr/share/python-support/pymol/pymol/preset.py -rw-r--r-- root/root 78244 2007-06-05 19:18:52 ./usr/share/python-support/pymol/pymol/menu.py -rw-r--r-- root/root 3606 2007-05-05 01:51:06 ./usr/share/python-support/pymol/pymol/externing.py -rw-r--r-- root/root 23806 2005-06-03 02:27:07 ./usr/share/python-support/pymol/pymol/vfont.py -rw-r--r-- root/root 37904 2007-06-21 04:11:39 ./usr/share/python-support/pymol/pymol/querying.py drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/share/python-support/pymol/pmg_wx/ -rw-r--r-- root/root 1879 2005-06-03 02:27:07 ./usr/share/python-support/pymol/pmg_wx/__init__.py -rw-r--r-- root/root 179 2007-11-05 00:33:00 ./usr/share/python-support/pymol/pymol-1.0.0.egg-info -rw-r--r-- root/root 17 2007-11-05 00:34:37 ./usr/share/python-support/pymol.dirs drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/lib/ drwxr-xr-x root/root 0 2007-11-05 00:34:33 ./usr/lib/mime/ drwxr-xr-x root/root 0 2007-11-05 00:34:33 ./usr/lib/mime/packages/ -rw-r--r-- root/root 136 2007-11-05 00:13:51 ./usr/lib/mime/packages/pymol drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/lib/python-support/ drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/lib/python-support/pymol/ drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/lib/python-support/pymol/python2.5/ drwxr-xr-x root/root 0 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/ drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/lib/python-support/pymol/python2.5/pymol/opengl/ drwxr-xr-x root/root 0 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/opengl/glu/ -rw-r--r-- root/root 3716 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/opengl/glu/_glu_num.so -rw-r--r-- root/root 18064 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/opengl/glu/_glu.so drwxr-xr-x root/root 0 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/opengl/gl/ -rw-r--r-- root/root 3704 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/opengl/gl/_opengl_num.so -rw-r--r-- root/root 3592 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/opengl/gl/openglutil_num.so -rw-r--r-- root/root 18580 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/opengl/gl/openglutil.so -rw-r--r-- root/root 93020 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/opengl/gl/_opengl.so drwxr-xr-x root/root 0 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/opengl/glut/ -rw-r--r-- root/root 53952 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/opengl/glut/_glut.so -rw-r--r-- root/root 88636 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/ExtensionClass.so -rw-r--r-- root/root 7682500 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/_cmd.so -rw-r--r-- root/root 179912 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/pymol/sglite.so drwxr-xr-x root/root 0 2007-11-05 00:34:37 ./usr/lib/python-support/pymol/python2.5/chempy/ drwxr-xr-x root/root 0 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/chempy/champ/ -rw-r--r-- root/root 89492 2007-11-05 00:34:55 ./usr/lib/python-support/pymol/python2.5/chempy/champ/_champ.so drwxr-xr-x root/root 0 2007-11-05 00:33:01 ./usr/bin/ -rwxr-xr-x root/root 216 2007-11-05 00:33:01 ./usr/bin/pymol pymol_1.0r2-1_hppa.changes: Format: 1.7 Date: Fri, 12 Oct 2007 15:47:49 +0200 Source: pymol Binary: pymol Architecture: hppa Version: 1.0r2-1 Distribution: autobuild Urgency: low Maintainer: Ubuntu/hppa Build Daemon Changed-By: Michael Banck Description: pymol - An OpenGL Molecular Graphics System written in Python Changes: pymol (1.0r2-1) unstable; urgency=low . * New upstream release. . [ Daniel Leidert ] * debian/control: Added Homepage and XS-Vcs-* fields. Added get-orig-source target to retrieve source from SVN. (Build-Depends): Raised debhelper compat level. * debian/pymol.menu (section): Menu section transition. * debian/rules: DH_COMPAT is obsolete. Better use debian/compat. Raised level to debhelper 5. * debian/watch: Fixed. Upstream doesn't provide tarballs anymore, so we check their SVN. . [ Michael Banck ] * debian/patches/13_activate_vmd_plugin.dpatch: Build the VMD plugin, by Martin Hoefling. * debian/control (Maintainer): Change to Debichem Team. Files: 5b2b961c3379dea581246704372cf936 6543578 science optional pymol_1.0r2-1_hppa.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/pymol-1.0r2 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --root=/home/buildd/build-422184-1018766/chroot-autobuild --purge libx11-data libxdmcp-dev readline-common gettext file zlib1g-dev python2.5 libxcb-xlib0-dev libdrm2 x11-common xlibmesa-gl-dev libx11-dev python-support libxt-dev libfreetype6 libice-dev libssl0.9.8 libgl1-mesa-dev libfreetype6-dev libxcb1 libgl1-mesa-glx x11proto-input-dev tk8.4 html2text debhelper libpthread-stubs0 glutg3-dev freeglut3-dev python libmagic1 libxau6 tcl8.4-dev libx11-6 xtrans-dev libglu1-mesa mime-support x11proto-core-dev python-numeric dpatch libxdamage1 libxcb-xlib0 libxcb1-dev libxt6 libxdmcp6 libxfixes3 po-debconf x11proto-xext-dev libpng12-0 libxxf86vm1 python-dev libice6 x11proto-kb-dev intltool-debian libpthread-stubs0-dev libxext-dev mesa-common-dev freeglut3 libxau-dev gettext-base libpng12-dev tk8.4-dev libsm6 libglu1-mesa-dev libreadline5 python-central libxext6 libbz2-1.0 libsqlite3-0 python2.5-dev libsm-dev libncursesw5 tcl8.4 (Reading database ... 14068 files and directories currently installed.) Removing xlibmesa-gl-dev ... Removing python-support ... Purging configuration files for python-support ... Removing libfreetype6-dev ... Removing debhelper ... Removing glutg3-dev ... Removing freeglut3-dev ... Removing python-numeric ... Removing dpatch ... Purging configuration files for dpatch ... Removing po-debconf ... Removing python-dev ... Removing intltool-debian ... Removing libxext-dev ... Removing freeglut3 ... Purging configuration files for freeglut3 ... Removing libpng12-dev ... Removing tk8.4-dev ... Removing libglu1-mesa-dev ... Removing python-central ... Purging configuration files for python-central ... dpkg - warning: while removing python-central, directory `/usr/share/pycentral-data' not empty so not removed. Removing python2.5-dev ... Removing gettext ... Removing file ... Purging configuration files for file ... Removing zlib1g-dev ... Removing libxt-dev ... Removing libfreetype6 ... Purging configuration files for libfreetype6 ... Removing libgl1-mesa-dev ... Removing tk8.4 ... Purging configuration files for tk8.4 ... Removing html2text ... Purging configuration files for html2text ... Removing python ... Purging configuration files for python ... Removing libmagic1 ... Purging configuration files for libmagic1 ... Removing tcl8.4-dev ... Removing libglu1-mesa ... Purging configuration files for libglu1-mesa ... Removing libxt6 ... Purging configuration files for libxt6 ... Removing x11proto-xext-dev ... Removing libpng12-0 ... Purging configuration files for libpng12-0 ... Removing mesa-common-dev ... Removing gettext-base ... Removing libsm-dev ... Removing tcl8.4 ... Purging configuration files for tcl8.4 ... Removing python2.5 ... Purging configuration files for python2.5 ... Removing libx11-dev ... Removing libice-dev ... Removing libssl0.9.8 ... Purging configuration files for libssl0.9.8 ... debconf: unable to initialize frontend: Dialog debconf: (No usable dialog-like program is installed, so the dialog based frontend cannot be used. at /usr/share/perl5/Debconf/FrontEnd/Dialog.pm line 75.) debconf: falling back to frontend: Readline debconf: unable to initialize frontend: Readline debconf: (This frontend requires a controlling tty.) debconf: falling back to frontend: Teletype Removing libgl1-mesa-glx ... Purging configuration files for libgl1-mesa-glx ... Removing x11proto-input-dev ... Removing xtrans-dev ... Removing mime-support ... Purging configuration files for mime-support ... Removing libxdamage1 ... Purging configuration files for libxdamage1 ... Removing libxfixes3 ... Purging configuration files for libxfixes3 ... Removing libxxf86vm1 ... Purging configuration files for libxxf86vm1 ... Removing x11proto-kb-dev ... Removing libsm6 ... Purging configuration files for libsm6 ... Removing libreadline5 ... Purging configuration files for libreadline5 ... Removing libxext6 ... Purging configuration files for libxext6 ... Removing libbz2-1.0 ... Purging configuration files for libbz2-1.0 ... Removing libsqlite3-0 ... Purging configuration files for libsqlite3-0 ... Removing libncursesw5 ... Purging configuration files for libncursesw5 ... Removing readline-common ... Purging configuration files for readline-common ... Removing libxcb-xlib0-dev ... Removing libdrm2 ... Purging configuration files for libdrm2 ... Removing libx11-6 ... Purging configuration files for libx11-6 ... Removing libxcb-xlib0 ... Purging configuration files for libxcb-xlib0 ... Removing libxcb1-dev ... Removing libice6 ... Purging configuration files for libice6 ... Removing libpthread-stubs0-dev ... Removing libxau-dev ... Removing libx11-data ... Removing libxdmcp-dev ... Removing libxcb1 ... Purging configuration files for libxcb1 ... Removing libpthread-stubs0 ... Removing libxau6 ... Purging configuration files for libxau6 ... Removing x11proto-core-dev ... Removing libxdmcp6 ... Purging configuration files for libxdmcp6 ... Removing x11-common ... Purging configuration files for x11-common ... debconf: unable to initialize frontend: Dialog debconf: (No usable dialog-like program is installed, so the dialog based frontend cannot be used. at /usr/share/perl5/Debconf/FrontEnd/Dialog.pm line 75.) debconf: falling back to frontend: Readline debconf: unable to initialize frontend: Readline debconf: (This frontend requires a controlling tty.) debconf: falling back to frontend: Teletype ****************************************************************************** Finished at 20071105-0035 Build needed 00:21:24, 91092k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '422184-1018766'] Scanning for processes to kill in build 422184-1018766... Scanning for processes to kill in build /home/buildd/build-422184-1018766/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '422184-1018766'] Unmounting chroot for build 422184-1018766... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '422184-1018766'] Removing build 422184-1018766