https://launchpad.net/ubuntu/+source/pynifti/0.20100607.1-4.1build1/+build/18265198 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-024 4.4.0-170-generic #199-Ubuntu SMP Thu Nov 14 01:46:18 UTC 2019 aarch64 Buildd toolchain package versions: launchpad-buildd_183 python-lpbuildd_183 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 17 Dec 13:12:17 ntpdate[1929]: adjust time server 10.211.37.1 offset 0.003243 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18265198 --image-type chroot /home/buildd/filecache-default/f005b6164729459c78307140747b338a2f357aa2 Creating target for build PACKAGEBUILD-18265198 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18265198 Starting target for build PACKAGEBUILD-18265198 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18265198 'deb http://ftpmaster.internal/ubuntu focal main universe' 'deb http://ftpmaster.internal/ubuntu focal-security main universe' 'deb http://ftpmaster.internal/ubuntu focal-updates main universe' 'deb http://ftpmaster.internal/ubuntu focal-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-18265198 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18265198 Updating target for build PACKAGEBUILD-18265198 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu focal-security InRelease [79.7 kB] Get:3 http://ftpmaster.internal/ubuntu focal-updates InRelease [79.7 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed InRelease [107 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main armhf Packages [930 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main Translation-en [499 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe armhf Packages [8388 kB] Get:8 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5173 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main armhf Packages [59.6 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main Translation-en [40.9 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/universe armhf Packages [382 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/universe Translation-en [257 kB] Fetched 16.3 MB in 6s (2792 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libhogweed5 libisl22 libnettle7 libperl5.30 perl-modules-5.30 The following packages will be upgraded: apt base-files base-passwd bash binutils binutils-arm-linux-gnueabihf binutils-common bsdutils bzip2 cpp-9 debianutils fdisk g++-9 gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv gzip hostname libacl1 libapparmor1 libapt-pkg5.90 libasan5 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcryptsetup12 libdebconfclient0 libdevmapper1.02.1 libfdisk1 libgcc-9-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblz4-1 libmount1 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsqlite3-0 libstdc++-9-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev lsb-base mount ncurses-base ncurses-bin perl perl-base sensible-utils systemd systemd-sysv sysvinit-utils util-linux 90 upgraded, 5 newly installed, 0 to remove and 0 not upgraded. Need to get 57.7 MB of archives. After this operation, 41.0 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main armhf libc6-dev armhf 2.30-0ubuntu3 [1943 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main armhf libc-dev-bin armhf 2.30-0ubuntu3 [63.6 kB] Get:3 http://ftpmaster.internal/ubuntu focal-proposed/main armhf linux-libc-dev armhf 5.4.0-9.12 [1064 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main armhf libisl22 armhf 0.22-2 [460 kB] Get:5 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libcc1-0 armhf 9.2.1-22ubuntu1 [41.8 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main armhf binutils-arm-linux-gnueabihf armhf 2.33.1-6ubuntu1 [2102 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main armhf libbinutils armhf 2.33.1-6ubuntu1 [315 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main armhf binutils-common armhf 2.33.1-6ubuntu1 [203 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main armhf binutils armhf 2.33.1-6ubuntu1 [3352 B] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main armhf gcc-9-base armhf 9.2.1-22ubuntu1 [19.1 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libgcc1 armhf 1:9.2.1-22ubuntu1 [37.4 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libgomp1 armhf 9.2.1-22ubuntu1 [77.4 kB] Get:13 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libatomic1 armhf 9.2.1-22ubuntu1 [7088 B] Get:14 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libasan5 armhf 9.2.1-22ubuntu1 [387 kB] Get:15 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libubsan1 armhf 9.2.1-22ubuntu1 [118 kB] Get:16 http://ftpmaster.internal/ubuntu focal-proposed/main armhf g++-9 armhf 9.2.1-22ubuntu1 [8537 kB] Get:17 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libstdc++-9-dev armhf 9.2.1-22ubuntu1 [1777 kB] Get:18 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libgcc-9-dev armhf 9.2.1-22ubuntu1 [686 kB] Get:19 http://ftpmaster.internal/ubuntu focal-proposed/main armhf gcc-9 armhf 9.2.1-22ubuntu1 [8072 kB] Get:20 http://ftpmaster.internal/ubuntu focal-proposed/main armhf cpp-9 armhf 9.2.1-22ubuntu1 [7473 kB] Get:21 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libstdc++6 armhf 9.2.1-22ubuntu1 [451 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main armhf libc6 armhf 2.30-0ubuntu3 [2144 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main armhf base-files armhf 11ubuntu2 [59.8 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main armhf debianutils armhf 4.9.1 [84.6 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main armhf bash armhf 5.0-5ubuntu1 [576 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main armhf bsdutils armhf 1:2.34-0.1ubuntu4 [58.4 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main armhf gzip armhf 1.10-0ubuntu4 [91.1 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main armhf hostname armhf 3.23 [10.4 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main armhf ncurses-bin armhf 6.1+20191019-1ubuntu1 [163 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main armhf perl-modules-5.30 all 5.30.0-9 [2739 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main armhf libperl5.30 armhf 5.30.0-9 [3286 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main armhf perl armhf 5.30.0-9 [224 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main armhf perl-base armhf 5.30.0-9 [1408 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main armhf bzip2 armhf 1.0.8-2 [32.4 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main armhf libbz2-1.0 armhf 1.0.8-2 [31.0 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main armhf libblkid1 armhf 2.34-0.1ubuntu4 [124 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main armhf libuuid1 armhf 2.34-0.1ubuntu4 [19.8 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main armhf libfdisk1 armhf 2.34-0.1ubuntu4 [163 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main armhf libpcre2-8-0 armhf 10.34-7 [172 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main armhf libselinux1 armhf 3.0-1 [60.1 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main armhf libmount1 armhf 2.34-0.1ubuntu4 [135 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main armhf libncurses6 armhf 6.1+20191019-1ubuntu1 [79.7 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main armhf libtinfo6 armhf 6.1+20191019-1ubuntu1 [72.8 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main armhf libncursesw6 armhf 6.1+20191019-1ubuntu1 [106 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main armhf libsmartcols1 armhf 2.34-0.1ubuntu4 [89.1 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main armhf fdisk armhf 2.34-0.1ubuntu4 [109 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main armhf util-linux armhf 2.34-0.1ubuntu4 [959 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main armhf libdebconfclient0 armhf 0.250ubuntu1 [5820 B] Get:49 http://ftpmaster.internal/ubuntu focal/main armhf base-passwd armhf 3.5.47 [46.4 kB] Get:50 http://ftpmaster.internal/ubuntu focal/main armhf libc-bin armhf 2.30-0ubuntu3 [496 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main armhf ncurses-base all 6.1+20191019-1ubuntu1 [17.9 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main armhf lsb-base all 11.1.0ubuntu1 [12.2 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main armhf sysvinit-utils armhf 2.96-1ubuntu1 [19.2 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main armhf liblz4-1 armhf 1.9.2-2 [51.7 kB] Get:55 http://ftpmaster.internal/ubuntu focal-proposed/main armhf systemd-sysv armhf 244-3ubuntu1 [9364 B] Get:56 http://ftpmaster.internal/ubuntu focal/main armhf libacl1 armhf 2.2.53-5 [15.9 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main armhf libapparmor1 armhf 2.13.3-5ubuntu5 [29.7 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main armhf libaudit-common all 1:2.8.5-2ubuntu5 [4076 B] Get:59 http://ftpmaster.internal/ubuntu focal/main armhf libcap-ng0 armhf 0.7.9-2.1 [9692 B] Get:60 http://ftpmaster.internal/ubuntu focal/main armhf libaudit1 armhf 1:2.8.5-2ubuntu5 [35.9 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main armhf libcap2 armhf 1:2.27-1 [12.7 kB] Get:62 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libudev1 armhf 244-3ubuntu1 [68.8 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main armhf libdevmapper1.02.1 armhf 2:1.02.155-2ubuntu7 [118 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main armhf libjson-c4 armhf 0.13.1+dfsg-6 [25.6 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main armhf libcryptsetup12 armhf 2:2.2.2-1ubuntu1 [163 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main armhf libnettle7 armhf 3.5.1+really3.5.1-2 [126 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main armhf libhogweed5 armhf 3.5.1+really3.5.1-2 [127 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main armhf libp11-kit0 armhf 0.23.18.1-2 [166 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main armhf libtasn1-6 armhf 4.15.0-2 [33.0 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main armhf libgnutls30 armhf 3.6.11.1-2 [732 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main armhf libkmod2 armhf 26-3ubuntu1 [37.0 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main armhf libpam0g armhf 1.3.1-5ubuntu3 [50.1 kB] Get:73 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libseccomp2 armhf 2.4.2-2ubuntu1 [32.4 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main armhf mount armhf 2.34-0.1ubuntu4 [108 kB] Get:75 http://ftpmaster.internal/ubuntu focal-proposed/main armhf systemd armhf 244-3ubuntu1 [3526 kB] Get:76 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libsystemd0 armhf 244-3ubuntu1 [239 kB] Get:77 http://ftpmaster.internal/ubuntu focal/main armhf libzstd1 armhf 1.4.4+dfsg-1 [207 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main armhf libapt-pkg5.90 armhf 1.9.5 [772 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main armhf libgcrypt20 armhf 1.8.5-3ubuntu1 [364 kB] Get:80 http://ftpmaster.internal/ubuntu focal/main armhf gpgv armhf 2.2.17-3ubuntu1 [170 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main armhf apt armhf 1.9.5 [1237 kB] Get:82 http://ftpmaster.internal/ubuntu focal/main armhf libpam-modules-bin armhf 1.3.1-5ubuntu3 [33.8 kB] Get:83 http://ftpmaster.internal/ubuntu focal/main armhf libpam-modules armhf 1.3.1-5ubuntu3 [232 kB] Get:84 http://ftpmaster.internal/ubuntu focal/main armhf libattr1 armhf 1:2.4.48-5 [11.5 kB] Get:85 http://ftpmaster.internal/ubuntu focal/main armhf libpam-runtime all 1.3.1-5ubuntu3 [37.3 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main armhf libsepol1 armhf 3.0-1 [220 kB] Get:87 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libsemanage-common all 3.0-1 [9880 B] Get:88 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libsemanage1 armhf 3.0-1 [73.9 kB] Get:89 http://ftpmaster.internal/ubuntu focal/main armhf sensible-utils all 0.0.12+nmu1 [15.0 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main armhf libsqlite3-0 armhf 3.30.1-1ubuntu1 [460 kB] Get:91 http://ftpmaster.internal/ubuntu focal/main armhf gpg armhf 2.2.17-3ubuntu1 [421 kB] Get:92 http://ftpmaster.internal/ubuntu focal/main armhf gpgconf armhf 2.2.17-3ubuntu1 [107 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main armhf gpg-agent armhf 2.2.17-3ubuntu1 [195 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main armhf liblockfile-bin armhf 1.16-1.1 [10.5 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main armhf liblockfile1 armhf 1.16-1.1 [5620 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 57.7 MB in 5s (12.8 MB/s) (Reading database ... 12487 files and directories currently installed.) 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RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18265198 armhf focal-proposed -c chroot:build-PACKAGEBUILD-18265198 --arch=armhf --dist=focal-proposed --nolog pynifti_0.20100607.1-4.1build1.dsc Initiating build PACKAGEBUILD-18265198 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-170-generic #199-Ubuntu SMP Thu Nov 14 01:46:18 UTC 2019 armv7l sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-024.buildd +==============================================================================+ | pynifti 0.20100607.1-4.1build1 (armhf) 17 Dec 2019 13:13 | +==============================================================================+ Package: pynifti Version: 0.20100607.1-4.1build1 Source Version: 0.20100607.1-4.1build1 Distribution: focal-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/pynifti-GjwXg7/pynifti-0.20100607.1' with '<>' I: NOTICE: Log filtering will replace 'build/pynifti-GjwXg7' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18265198/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- pynifti_0.20100607.1-4.1build1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-aZfjS3/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-aZfjS3/apt_archive ./ InRelease Get:2 copy:/<>/resolver-aZfjS3/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-aZfjS3/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-aZfjS3/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-aZfjS3/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (105 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-aZfjS3/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14400 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: cdbs, debhelper (>= 5.0.38), swig (>= 1.3.29), python-all-dev (>= 2.4), dh-python, python-numpy, libnifti-dev (>> 1.1.0-2), python-sphinx Filtered Build-Depends: cdbs, debhelper (>= 5.0.38), swig (>= 1.3.29), python-all-dev (>= 2.4), dh-python, python-numpy, libnifti-dev (>> 1.1.0-2), python-sphinx dpkg-deb: building package 'sbuild-build-depends-pynifti-dummy' in '/<>/resolver-oQCaKP/apt_archive/sbuild-build-depends-pynifti-dummy.deb'. Ign:1 copy:/<>/resolver-oQCaKP/apt_archive ./ InRelease Get:2 copy:/<>/resolver-oQCaKP/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-oQCaKP/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-oQCaKP/apt_archive ./ Sources [275 B] Get:5 copy:/<>/resolver-oQCaKP/apt_archive ./ Packages [590 B] Fetched 2984 B in 0s (129 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install pynifti build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cdbs debhelper dh-autoreconf dh-python dh-strip-nondeterminism dh-translations docutils-common dwz file gettext gettext-base groff-base intltool intltool-debian jq libarchive-zip-perl libblas3 libbsd0 libcroco3 libdebhelper-perl libelf1 libencode-locale-perl libexpat1 libexpat1-dev libfile-listing-perl libfile-stripnondeterminism-perl libfile-which-perl libgfortran5 libglib2.0-0 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu63 libio-html-perl libio-socket-ssl-perl libjq1 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1 libmpdec2 libnet-http-perl libnet-ssleay-perl libnifti-dev libnifti2 libonig5 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libsub-override-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwww-perl libwww-robotrules-perl libxml-parser-perl libxml2 m4 man-db mime-support netbase perl-openssl-defaults po-debconf python python-alabaster python-all python-all-dev python-attr python-babel python-babel-localedata python-certifi python-chardet python-dev python-docutils python-idna python-imagesize python-jinja2 python-markupsafe python-minimal python-numpy python-packaging python-pkg-resources python-pygments python-pyparsing python-requests python-roman python-six python-sphinx python-typing python-tz python-urllib3 python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3-scour python3-six python3.7 python3.7-minimal scour sgml-base sphinx-common swig swig3.0 xml-core Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation devscripts dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libdata-dump-perl libcrypt-ssleay-perl libtool-doc gfortran | fortran95-compiler gcj-jdk libauthen-ntlm-perl m4-doc apparmor less www-browser libmail-box-perl python-doc python-tk python-attr-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python-jinja2-doc gfortran python-pytest python-numpy-dbg python-numpy-doc python-setuptools python-pygments-doc ttf-bitstream-vera python-pyparsing-doc python-cryptography python-openssl python-socks dvipng imagemagick-6.q16 latexmk libjs-mathjax python-sphinx-rtd-theme python-stemmer sphinx-doc texlive-fonts-recommended texlive-latex-extra texlive-plain-generic python-ntlm python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python3-setuptools python3.7-venv python3.7-doc gir1.2-rsvg-2.0 python3-gi-cairo sgml-base-doc swig-doc swig-examples swig3.0-examples swig3.0-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libhtml-format-perl javascript-common libltdl-dev libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl libmail-sendmail-perl docutils-doc libpaper-utils python-pil python-enum34 python-cryptography python-ipaddress python-openssl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cdbs debhelper dh-autoreconf dh-python dh-strip-nondeterminism dh-translations docutils-common dwz file gettext gettext-base groff-base intltool intltool-debian jq libarchive-zip-perl libblas3 libbsd0 libcroco3 libdebhelper-perl libelf1 libencode-locale-perl libexpat1 libexpat1-dev libfile-listing-perl libfile-stripnondeterminism-perl libfile-which-perl libgfortran5 libglib2.0-0 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu63 libio-html-perl libio-socket-ssl-perl libjq1 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1 libmpdec2 libnet-http-perl libnet-ssleay-perl libnifti-dev libnifti2 libonig5 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libsub-override-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwww-perl libwww-robotrules-perl libxml-parser-perl libxml2 m4 man-db mime-support netbase perl-openssl-defaults po-debconf python python-alabaster python-all python-all-dev python-attr python-babel python-babel-localedata python-certifi python-chardet python-dev python-docutils python-idna python-imagesize python-jinja2 python-markupsafe python-minimal python-numpy python-packaging python-pkg-resources python-pygments python-pyparsing python-requests python-roman python-six python-sphinx python-typing python-tz python-urllib3 python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3-scour python3-six python3.7 python3.7-minimal sbuild-build-depends-pynifti-dummy scour sgml-base sphinx-common swig swig3.0 xml-core 0 upgraded, 139 newly installed, 0 to remove and 0 not upgraded. Need to get 42.8 MB of archives. After this operation, 178 MB of additional disk space will be used. 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[582 kB] Get:132 http://ftpmaster.internal/ubuntu focal/universe armhf python-urllib3 all 1.24.1-1ubuntu1 [83.7 kB] Get:133 http://ftpmaster.internal/ubuntu focal-proposed/universe armhf python-requests all 2.22.0-2 [47.0 kB] Get:134 http://ftpmaster.internal/ubuntu focal/universe armhf python-typing all 3.6.6-1 [22.8 kB] Get:135 http://ftpmaster.internal/ubuntu focal/main armhf sphinx-common all 1.8.5-4 [492 kB] Get:136 http://ftpmaster.internal/ubuntu focal-proposed/universe armhf python-alabaster all 0.7.8-1build1 [18.6 kB] Get:137 http://ftpmaster.internal/ubuntu focal/universe armhf python-sphinx all 1.8.5-4 [484 kB] Get:138 http://ftpmaster.internal/ubuntu focal/universe armhf swig3.0 armhf 3.0.12-2.2 [1065 kB] Get:139 http://ftpmaster.internal/ubuntu focal/universe armhf swig armhf 3.0.12-2.2 [6464 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 42.8 MB in 7s (6368 kB/s) Selecting previously unselected package libpython3.7-minimal:armhf. 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Preparing to unpack .../113-sbuild-build-depends-pynifti-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-pynifti-dummy (0.invalid.0) ... Setting up libpipeline1:armhf (1.5.1-3) ... Setting up libfile-which-perl (1.23-1) ... Setting up mime-support (3.64ubuntu1) ... Setting up libnifti2 (2.0.0-3) ... Setting up libmagic-mgc (1:5.37-6) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:armhf (2.63.1-2ubuntu1) ... No schema files found: doing nothing. Setting up libhtml-tagset-perl (3.20-4) ... Setting up libdebhelper-perl (12.7.1ubuntu1) ... Setting up liblwp-mediatypes-perl (6.04-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up libmagic1:armhf (1:5.37-6) ... Setting up perl-openssl-defaults:armhf (3build1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up libencode-locale-perl (1.05-1) ... Setting up file (1:5.37-6) ... Setting up libicu63:armhf (63.2-2) ... Setting up python-babel-localedata (2.6.0+dfsg.1-1) ... Setting up libpython2.7-stdlib:armhf (2.7.17-1) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:armhf (3.9.0-1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libexpat1-dev:armhf (2.2.9-1) ... Setting up swig3.0 (3.0.12-2.2) ... Setting up libsigsegv2:armhf (2.12-2) ... Setting up libio-html-perl (1.001-1) ... Setting up autopoint (0.19.8.1-10) ... Setting up libgfortran5:armhf (9.2.1-22ubuntu1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libuchardet0:armhf (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up netbase (5.8) ... Setting up sgml-base (1.29.1) ... Setting up libmpdec2:armhf (2.4.2-2) ... Setting up libjs-jquery (3.3.1~dfsg-3) ... Setting up libnifti-dev (2.0.0-3) ... Setting up libbsd0:armhf (0.10.0-1) ... Setting up libelf1:armhf (0.176-1.1) ... Setting up libxml2:armhf (2.9.4+dfsg1-8ubuntu1) ... Setting up liburi-perl (1.76-1) ... Setting up libonig5:armhf (6.9.2-1) ... Setting up libjs-underscore (1.9.1~dfsg-1) ... Setting up libnet-ssleay-perl (1.88-0ubuntu2) ... Setting up libfile-stripnondeterminism-perl (1.6.3-1) ... Setting up libhttp-date-perl (6.05-1) ... Setting up libpython3.7-stdlib:armhf (3.7.5-2) ... Setting up libpython2.7:armhf (2.7.17-1) ... Setting up liblapack3:armhf (3.9.0-1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libpython2.7-dev:armhf (2.7.17-1) ... Setting up swig (3.0.12-2.2) ... Setting up libfile-listing-perl (6.04-1) ... Setting up python2.7 (2.7.17-1) ... Setting up libtool (2.4.6-11) ... Setting up libpython2-stdlib:armhf (2.7.17-2) ... Setting up libjq1:armhf (1.6-1) ... Setting up libnet-http-perl (6.19-1) ... Setting up m4 (1.4.18-4) ... Setting up python2 (2.7.17-2) ... Setting up python-certifi (2019.11.28-1) ... Setting up python-six (1.13.0-1) ... Setting up libpython-stdlib:armhf (2.7.17-2) ... Setting up python-pyparsing (2.4.2-1) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:armhf (0.6.13-1) ... Setting up libjs-sphinxdoc (1.8.5-4) ... Setting up python-markupsafe (1.1.0-1build1) ... Setting up autoconf (2.69-11ubuntu1) ... Setting up dh-strip-nondeterminism (1.6.3-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up python-tz (2019.3-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-3) ... Setting up xml-core (0.18+nmu1) ... Setting up libhtml-parser-perl (3.72-3build3) ... Setting up jq (1.6-1) ... Setting up python-alabaster (0.7.8-1build1) ... Setting up libpython2-dev:armhf (2.7.17-2) ... Setting up python (2.7.17-2) ... Setting up libio-socket-ssl-perl (2.066-0ubuntu4) ... Setting up libpython3-stdlib:armhf (3.7.5-1ubuntu1) ... Setting up libhttp-message-perl (6.18-1) ... Setting up python2.7-dev (2.7.17-1) ... Setting up automake (1:1.16.1-4ubuntu4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python-urllib3 (1.24.1-1ubuntu1) ... Setting up python3.7 (3.7.5-2) ... Setting up libhttp-negotiate-perl (6.01-1) ... Setting up gettext (0.19.8.1-10) ... Setting up python2-dev (2.7.17-2) ... Setting up python-typing (3.6.6-1) ... Setting up libhttp-cookies-perl (6.08-1) ... Setting up python-pkg-resources (41.4.0-1) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up python3 (3.7.5-1ubuntu1) ... Setting up python-all (2.7.17-2) ... Setting up python-attr (18.2.0-1) ... Setting up man-db (2.9.0-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python-pygments (2.3.1+dfsg-1ubuntu1) ... Setting up python-jinja2 (2.10-2ubuntu2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libpython-dev:armhf (2.7.17-2) ... Setting up python3-six (1.13.0-1) ... Setting up python-imagesize (1.0.0-1) ... Setting up python-idna (2.6-2) ... Setting up sphinx-common (1.8.5-4) ... Setting up python-roman (2.0.0-3) ... Setting up python-chardet (3.0.4-4build1) ... Setting up python-requests (2.22.0-2) ... Setting up python-babel (2.6.0+dfsg.1-1) ... update-alternatives: using /usr/bin/pybabel-python2 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-lib2to3 (3.8.0-1) ... Setting up python-dev (2.7.17-2) ... Setting up python-packaging (19.1-2) ... Setting up python3-pkg-resources (41.4.0-1) ... Setting up python3-distutils (3.8.0-1) ... Setting up dh-python (4.20191017ubuntu1) ... Setting up libpython-all-dev:armhf (2.7.17-2) ... Setting up python-numpy (1:1.16.5-1ubuntu2) ... Setting up po-debconf (1.0.21) ... Setting up python3-scour (0.37-4) ... Setting up python-all-dev (2.7.17-2) ... Setting up scour (0.37-4) ... Setting up libwww-perl (6.43-1) ... Setting up dh-autoreconf (19) ... Setting up liblwp-protocol-https-perl (6.07-2ubuntu2) ... Setting up libxml-parser-perl (2.46-1) ... Setting up debhelper (12.7.1ubuntu1) ... Setting up intltool (0.51.0-5ubuntu1) ... Setting up dh-translations (144) ... Setting up cdbs (0.4.159ubuntu1) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... Processing triggers for sgml-base (1.29.1) ... Setting up docutils-common (0.15.2+dfsg-1) ... Processing triggers for sgml-base (1.29.1) ... Setting up python-docutils (0.15.2+dfsg-1) ... update-alternatives: using /usr/share/docutils/scripts/python2/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python-sphinx (1.8.5-4) ... update-alternatives: using /usr/share/sphinx/scripts/python2/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python2/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python2/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python2/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode Setting up sbuild-build-depends-pynifti-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-170-generic arm64 (armv7l) Toolchain package versions: binutils_2.33.1-6ubuntu1 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-22ubuntu1 gcc-9_9.2.1-22ubuntu1 libc6-dev_2.30-0ubuntu3 libstdc++-9-dev_9.2.1-22ubuntu1 libstdc++6_9.2.1-22ubuntu1 linux-libc-dev_5.4.0-9.12 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.5 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libdebhelper-perl_12.7.1ubuntu1 libdevmapper1.02.1_2:1.02.155-2ubuntu7 libdpkg-perl_1.19.7ubuntu2 libelf1_0.176-1.1 libencode-locale-perl_1.05-1 libexpat1_2.2.9-1 libexpat1-dev_2.2.9-1 libext2fs2_1.45.3-4ubuntu2 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu4 libffi6_3.2.1-9 libfile-listing-perl_6.04-1 libfile-stripnondeterminism-perl_1.6.3-1 libfile-which-perl_1.23-1 libgcc-9-dev_9.2.1-22ubuntu1 libgcc1_1:9.2.1-22ubuntu1 libgcrypt20_1.8.5-3ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_9.2.1-22ubuntu1 libglib2.0-0_2.63.1-2ubuntu1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.11.1-2 libgomp1_9.2.1-22ubuntu1 libgpg-error0_1.36-7 libhogweed4_3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhtml-parser-perl_3.72-3build3 libhtml-tagset-perl_3.20-4 libhtml-tree-perl_5.07-2 libhttp-cookies-perl_6.08-1 libhttp-date-perl_6.05-1 libhttp-message-perl_6.18-1 libhttp-negotiate-perl_6.01-1 libicu63_63.2-2 libidn2-0_2.2.0-2 libio-html-perl_1.001-1 libio-socket-ssl-perl_2.066-0ubuntu4 libip4tc2_1.8.3-2ubuntu5 libisl21_0.21-2 libisl22_0.22-2 libjq1_1.6-1 libjs-jquery_3.3.1~dfsg-3 libjs-sphinxdoc_1.8.5-4 libjs-underscore_1.9.1~dfsg-1 libjson-c4_0.13.1+dfsg-6 libkmod2_26-3ubuntu1 liblapack3_3.9.0-1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblwp-mediatypes-perl_6.04-1 liblwp-protocol-https-perl_6.07-2ubuntu2 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1ubuntu4 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libncurses6_6.1+20191019-1ubuntu1 libncursesw6_6.1+20191019-1ubuntu1 libnet-http-perl_6.19-1 libnet-ssleay-perl_1.88-0ubuntu2 libnettle6_3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnifti-dev_2.0.0-3 libnifti2_2.0.0-3 libnpth0_1.6-1 libonig5_6.9.2-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5ubuntu3 libpam-modules-bin_1.3.1-5ubuntu3 libpam-runtime_1.3.1-5ubuntu3 libpam0g_1.3.1-5ubuntu3 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-9 libpipeline1_1.5.1-3 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libwww-perl_6.43-1 libwww-robotrules-perl_6.02-1 libxml-parser-perl_2.46-1 libxml2_2.9.4+dfsg1-8ubuntu1 libzstd1_1.4.4+dfsg-1 linux-libc-dev_5.4.0-9.12 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu4 logsave_1.45.3-4ubuntu2 lsb-base_11.1.0ubuntu1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.3-17ubuntu3 mime-support_3.64ubuntu1 mount_2.34-0.1ubuntu4 ncurses-base_6.1+20191019-1ubuntu1 ncurses-bin_6.1+20191019-1ubuntu1 netbase_5.8 openssl_1.1.1c-1ubuntu4 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu4 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-9 perl-openssl-defaults_3build1 pinentry-curses_1.1.0-3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu3 python_2.7.17-2 python-alabaster_0.7.8-1build1 python-all_2.7.17-2 python-all-dev_2.7.17-2 python-attr_18.2.0-1 python-babel_2.6.0+dfsg.1-1 python-babel-localedata_2.6.0+dfsg.1-1 python-certifi_2019.11.28-1 python-chardet_3.0.4-4build1 python-dev_2.7.17-2 python-docutils_0.15.2+dfsg-1 python-idna_2.6-2 python-imagesize_1.0.0-1 python-jinja2_2.10-2ubuntu2 python-markupsafe_1.1.0-1build1 python-minimal_2.7.17-2 python-numpy_1:1.16.5-1ubuntu2 python-packaging_19.1-2 python-pkg-resources_41.4.0-1 python-pygments_2.3.1+dfsg-1ubuntu1 python-pyparsing_2.4.2-1 python-requests_2.22.0-2 python-roman_2.0.0-3 python-six_1.13.0-1 python-sphinx_1.8.5-4 python-typing_3.6.6-1 python-tz_2019.3-1 python-urllib3_1.24.1-1ubuntu1 python2_2.7.17-2 python2-dev_2.7.17-2 python2-minimal_2.7.17-2 python2.7_2.7.17-1 python2.7-dev_2.7.17-1 python2.7-minimal_2.7.17-1 python3_3.7.5-1ubuntu1 python3-distutils_3.8.0-1 python3-lib2to3_3.8.0-1 python3-minimal_3.7.5-1ubuntu1 python3-pkg-resources_41.4.0-1 python3-scour_0.37-4 python3-six_1.13.0-1 python3.7_3.7.5-2 python3.7-minimal_3.7.5-2 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-pynifti-dummy_0.invalid.0 scour_0.37-4 sed_4.7-1 sensible-utils_0.0.12+nmu1 sgml-base_1.29.1 sphinx-common_1.8.5-4 swig_3.0.12-2.2 swig3.0_3.0.12-2.2 systemd_244-3ubuntu1 systemd-sysv_244-3ubuntu1 sysvinit-utils_2.96-1ubuntu1 tar_1.30+dfsg-6 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 util-linux_2.34-0.1ubuntu4 xml-core_0.18+nmu1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Dec 17 12:50:30 2019 UTC gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./pynifti_0.20100607.1-4.1build1.dsc dpkg-source: info: extracting pynifti in pynifti-0.20100607.1 dpkg-source: info: unpacking pynifti_0.20100607.1.orig.tar.gz dpkg-source: info: applying pynifti_0.20100607.1-4.1build1.diff.gz dpkg-source: info: upstream files that have been modified: pynifti-0.20100607.1/Makefile pynifti-0.20100607.1/TODO pynifti-0.20100607.1/man/pynifti_pst.1 pynifti-0.20100607.1/nifti/clib.i pynifti-0.20100607.1/nifti/format.py pynifti-0.20100607.1/nifti/utils.py pynifti-0.20100607.1/setup.py pynifti-0.20100607.1/tests/test_fileio.py Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18265198 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18265198 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-18265198 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package pynifti dpkg-buildpackage: info: source version 0.20100607.1-4.1build1 dpkg-buildpackage: info: source distribution focal dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf dpkg-source: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file fakeroot debian/rules clean pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions test -x debian/rules dh_clean dh_clean: Compatibility levels before 9 are deprecated (level 5 in use) cd . && python setup.py clean -a; running clean 'build/lib.linux-armv7l-2.7' does not exist -- can't clean it 'build/bdist.linux-armv7l' does not exist -- can't clean it 'build/scripts.linux-armv7l-2.7' does not exist -- can't clean it rm -rf debian/python-module-stampdir find "/<>" -name '*.py[co]' -delete find "/<>" -name __pycache__ -type d -empty -delete find "/<>" -prune -name '*.egg-info' -exec rm -rf '{}' ';' /usr/bin/make distclean make[1]: Entering directory '/<>' rm -rf build rm *-stamp rm: cannot remove '*-stamp': No such file or directory make[1]: [Makefile:50: clean] Error 1 (ignored) rm nifti/clib.py nifti/_clib.so rm: cannot remove 'nifti/clib.py': No such file or directory rm: cannot remove 'nifti/_clib.so': No such file or directory make[1]: [Makefile:51: clean] Error 1 (ignored) find 3rd -mindepth 2 -maxdepth 2 -type f -name '*-stamp' | xargs -L10 rm -f rm MANIFEST rm: cannot remove 'MANIFEST': No such file or directory make[1]: [Makefile:56: distclean] Error 1 (ignored) rm tests/*.pyc rm: cannot remove 'tests/*.pyc': No such file or directory make[1]: [Makefile:57: distclean] Error 1 (ignored) rm coverage rm: cannot remove 'coverage': No such file or directory make[1]: [Makefile:58: distclean] Error 1 (ignored) rm -r dist rm: cannot remove 'dist': No such file or directory make[1]: [Makefile:60: distclean] Error 1 (ignored) rm build-stamp apidoc-stamp rm: cannot remove 'build-stamp': No such file or directory rm: cannot remove 'apidoc-stamp': No such file or directory make[1]: [Makefile:61: distclean] Error 1 (ignored) rm tests/data/*.hdr.* tests/data/*.img.* tests/data/something.nii \ tests/data/noise* tests/data/None.nii rm: cannot remove 'tests/data/*.hdr.*': No such file or directory rm: cannot remove 'tests/data/*.img.*': No such file or directory rm: cannot remove 'tests/data/something.nii': No such file or directory rm: cannot remove 'tests/data/noise*': No such file or directory rm: cannot remove 'tests/data/None.nii': No such file or directory make[1]: [Makefile:62: distclean] Error 1 (ignored) make[1]: Leaving directory '/<>' debian/rules build-arch pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions test -x debian/rules mkdir -p "." CDBS WARNING: DEB_COMPRESS_EXCLUDE is deprecated since 0.4.85 mkdir -p debian/python-module-stampdir set -e; cd . && python setup.py build --build-base="/<>/./build"; running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "nifti._clib" sources creating /<>/build creating /<>/build/src.linux-armv7l-2.7 creating /<>/build/src.linux-armv7l-2.7/nifti swig: nifti/clib.i swig -python -I/usr/include/nifti -I/usr/include/nifticlibs -I/usr/local/include/nifti -I/usr/local/include/nifticlibs -I/usr/local/include -o /<>/build/src.linux-armv7l-2.7/nifti/clib_wrap.c -outdir /<>/build/src.linux-armv7l-2.7/nifti nifti/clib.i Language subdirectory: python Search paths: ./ /usr/include/nifti/ /usr/include/nifticlibs/ /usr/local/include/nifti/ /usr/local/include/nifticlibs/ /usr/local/include/ ./swig_lib/python/ /usr/share/swig3.0/python/ ./swig_lib/ /usr/share/swig3.0/ Preprocessing... Starting language-specific parse... Processing unnamed structs... Processing types... C++ analysis... Generating wrappers... build_src: building npy-pkg config files running build_py creating /<>/build/lib.linux-armv7l-2.7 creating /<>/build/lib.linux-armv7l-2.7/nifti copying nifti/nifticlib.py -> /<>/./build/lib.linux-armv7l-2.7/nifti copying nifti/extensions.py -> /<>/./build/lib.linux-armv7l-2.7/nifti copying nifti/format.py -> /<>/./build/lib.linux-armv7l-2.7/nifti copying nifti/niftiformat.py -> /<>/./build/lib.linux-armv7l-2.7/nifti copying nifti/utils.py -> /<>/./build/lib.linux-armv7l-2.7/nifti copying nifti/niftiimage.py -> /<>/./build/lib.linux-armv7l-2.7/nifti copying nifti/__init__.py -> /<>/./build/lib.linux-armv7l-2.7/nifti copying nifti/imgfx.py -> /<>/./build/lib.linux-armv7l-2.7/nifti copying nifti/image.py -> /<>/./build/lib.linux-armv7l-2.7/nifti copying /<>/build/src.linux-armv7l-2.7/nifti/clib.py -> /<>/./build/lib.linux-armv7l-2.7/nifti running build_ext customize UnixCCompiler customize UnixCCompiler using build_ext building 'nifti._clib' extension compiling C sources C compiler: arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC creating /<>/build/temp.linux-armv7l-2.7/build creating /<>/build/temp.linux-armv7l-2.7/<> creating /<>/build/temp.linux-armv7l-2.7/<> creating /<>/build/temp.linux-armv7l-2.7/<>/build creating /<>/build/temp.linux-armv7l-2.7/<>/build/src.linux-armv7l-2.7 creating /<>/build/temp.linux-armv7l-2.7/<>/build/src.linux-armv7l-2.7/nifti compile options: '-I/usr/include/nifti -I/usr/include/nifticlibs -I/usr/local/include/nifti -I/usr/local/include/nifticlibs -I/usr/local/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c' arm-linux-gnueabihf-gcc: /<>/build/src.linux-armv7l-2.7/nifti/clib_wrap.c In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from /<>/build/src.linux-armv7l-2.7/nifti/clib_wrap.c:3082: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ /<>/build/src.linux-armv7l-2.7/nifti/clib_wrap.c:3148:54: warning: initialization of ‘void (*)(PyObject *)’ {aka ‘void (*)(struct _object *)’} from incompatible pointer type ‘void (*)(_MyDeallocObject *)’ {aka ‘void (*)(struct *)’} [-Wincompatible-pointer-types] 3148 | 0, "mydeallocator", sizeof(_MyDeallocObject), 0, _mydealloc_dealloc, | ^~~~~~~~~~~~~~~~~~ /<>/build/src.linux-armv7l-2.7/nifti/clib_wrap.c:3148:54: note: (near initialization for ‘_MyDeallocType.tp_dealloc’) /<>/build/src.linux-armv7l-2.7/nifti/clib_wrap.c: In function ‘wrapImageDataWithArray’: /<>/build/src.linux-armv7l-2.7/nifti/clib_wrap.c:3239:12: warning: assignment to ‘PyObject *’ {aka ‘struct _object *’} from incompatible pointer type ‘_MyDeallocObject *’ {aka ‘struct *’} [-Wincompatible-pointer-types] 3239 | newobj = PyObject_New(_MyDeallocObject, &_MyDeallocType); | ^ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC /<>/./build/temp.linux-armv7l-2.7/<>/build/src.linux-armv7l-2.7/nifti/clib_wrap.o -lniftiio -o /<>/./build/lib.linux-armv7l-2.7/nifti/_clib.so running build_scripts creating /<>/build/scripts.linux-armv7l-2.7 copying and adjusting bin/pynifti_pst -> /<>/./build/scripts.linux-armv7l-2.7 changing mode of /<>/./build/scripts.linux-armv7l-2.7/pynifti_pst from 664 to 775 touch debian/python-module-stampdir/python-nifti /usr/bin/make unittest make[1]: Entering directory '/<>' python setup.py config --noisy running config python setup.py build_ext running build_ext running build_src build_src building extension "nifti._clib" sources build_src: building npy-pkg config files customize UnixCCompiler customize UnixCCompiler using build_ext python setup.py build_py running build_py # to overcome the issue of not-installed _clib.so ln -sf ../build/lib.linux-armv7l-2.7/nifti/_clib.so nifti/ ln -sf ../build/src.linux-armv7l-2.7/nifti/clib.py nifti/ touch build-stamp EEEEEEEEEEEEEEEEE....EEE.E ====================================================================== ERROR: testArrayAssign (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 337, in testArrayAssign self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 156, in save self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testDTypesSupport (test_fileio.FileIOTests) Check load/cycles with all supported dtypes ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 375, in testDTypesSupport nim.save(self.fp.name) File "/<>/nifti/image.py", line 156, in save self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testDataAccess (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 78, in testDataAccess self.failUnlessEqual(self.nimg.data[0,4,17,42], 435) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testDataOwnership (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 88, in testDataOwnership data_copy = self.nimg.asarray() File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testExtensionsSurvive (test_fileio.FileIOTests) check if extensions actually get safed to the file. ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 271, in testExtensionsSurvive self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testFromScratch (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 110, in testFromScratch n.save(self.fp.name) File "/<>/nifti/image.py", line 156, in save self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testIdempotentLoadSaveCycle (test_fileio.FileIOTests) check if file is unchanged by load/save cycle. ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 58, in testIdempotentLoadSaveCycle self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testMemoryMapping (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 134, in testMemoryMapping self.nimg.save(self.fp_plain.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testMetaReconstruction (test_fileio.FileIOTests) Check if the meta data gets properly reconstructed during ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 316, in testMetaReconstruction self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testPristineExtensions (test_fileio.FileIOTests) See whether extensions of variable length are loaded properly. ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 299, in testPristineExtensions self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testQFormSetting (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 167, in testQFormSetting self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testQFormSetting_fromArray (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 217, in testQFormSetting_fromArray nimg.save(self.fp.name) File "/<>/nifti/image.py", line 156, in save self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testQFormSetting_fromFile (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 178, in testQFormSetting_fromFile self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testUnicodeHandling (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 364, in testUnicodeHandling nim.save(outpath) File "/<>/nifti/image.py", line 156, in save self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testUnicodeLoadSaveCycle (test_fileio.FileIOTests) check load/save cycle for unicode filenames. ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 69, in testUnicodeLoadSaveCycle self.nimg.save( os.path.join( self.workdir, 'üöä.nii.gz') ) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: test_setPixDims (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 231, in test_setPixDims self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: test_setVoxDims (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 252, in test_setVoxDims self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testMetaData (test_extensions.NiftiExtensionTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_extensions.py", line 59, in testMetaData nim2 = NiftiImage(nim.data, nim.header) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testArrayAssign (test_misc.MiscTests) Test whether the header is updated correctly when assigning a new ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_misc.py", line 50, in testArrayAssign self.failUnless(nimg.data.shape == alt_array.shape) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testCopying (test_misc.MiscTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_misc.py", line 60, in testCopying n2.data[0,3,4,2] = 543 File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testPickleCycle (test_misc.MiscTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_misc.py", line 96, in testPickleCycle self.failUnless((nim.data == nim2.data).all()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ---------------------------------------------------------------------- Ran 26 tests in 1.643s FAILED (errors=21) make[1]: Leaving directory '/<>' /usr/bin/make htmldoc make[1]: Entering directory '/<>' cd doc && PYTHONPATH=/<> /usr/bin/make html make[2]: Entering directory '/<>/doc' mkdir -p ../build/html ../build/doctrees sphinx-build -b html -d ../build/doctrees . ../build/html Running Sphinx v1.8.5 building [mo]: targets for 0 po files that are out of date building [html]: targets for 9 source files that are out of date updating environment: 9 added, 0 changed, 0 removed reading sources... [ 11%] changelog reading sources... [ 22%] contents reading sources... [ 33%] examples reading sources... [ 44%] index reading sources... [ 55%] installation reading sources... [ 66%] intro reading sources... [ 77%] legal reading sources... [ 88%] manual reading sources... [100%] modref /<>/doc/changelog.txt:31: WARNING: Unexpected indentation. /<>/doc/changelog.txt:35: WARNING: Unexpected indentation. /<>/doc/changelog.txt:42: WARNING: Unexpected indentation. /<>/doc/changelog.txt:43: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/doc/installation.txt:75: WARNING: Unknown target name: "rpm-package repositories". looking for now-outdated files... none found pickling environment... done checking consistency... /<>/doc/index.txt: WARNING: document isn't included in any toctree /<>/doc/manual.txt: WARNING: document isn't included in any toctree done preparing documents... done writing output... [ 11%] changelog writing output... [ 22%] contents writing output... [ 33%] examples writing output... [ 44%] index /usr/lib/python2.7/dist-packages/sphinx/builders/html.py:1171: RemovedInSphinx20Warning: Now html_sidebars only allows list of sidebar templates as a value. Support for a string value will be removed at Sphinx-2.0. self.add_sidebars(pagename, ctx) writing output... [ 55%] installation writing output... [ 66%] intro writing output... [ 77%] legal writing output... [ 88%] manual writing output... [100%] modref generating indices... genindex py-modindex writing additional pages... search copying images... [100%] pics/fslview_pst.png copying static files... done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 7 warnings. The HTML pages are in ../build/html. Build finished. The HTML pages are in ../build/html. make[2]: Leaving directory '/<>/doc' make[1]: Leaving directory '/<>' fakeroot debian/rules binary-arch pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions test -x debian/rules dh_testroot dh_clean -k dh_clean: Compatibility levels before 9 are deprecated (level 5 in use) dh_clean: dh_clean -k is deprecated; use dh_prep instead dh_clean: This feature will be removed in compat 12. dh_installdirs -A dh_installdirs: Compatibility levels before 9 are deprecated (level 5 in use) mkdir -p "." CDBS WARNING: DEB_COMPRESS_EXCLUDE is deprecated since 0.4.85 mkdir -p debian/python-module-stampdir set -e; cd . && python setup.py build --build-base="/<>/./build"; running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "nifti._clib" sources build_src: building npy-pkg config files running build_py running build_ext customize UnixCCompiler customize UnixCCompiler using build_ext running build_scripts touch debian/python-module-stampdir/python-nifti /usr/bin/make unittest make[1]: Entering directory '/<>' EEEEEEEEEEEEEEEEE....EEE.E ====================================================================== ERROR: testArrayAssign (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 337, in testArrayAssign self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 156, in save self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testDTypesSupport (test_fileio.FileIOTests) Check load/cycles with all supported dtypes ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 375, in testDTypesSupport nim.save(self.fp.name) File "/<>/nifti/image.py", line 156, in save self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testDataAccess (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 78, in testDataAccess self.failUnlessEqual(self.nimg.data[0,4,17,42], 435) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testDataOwnership (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 88, in testDataOwnership data_copy = self.nimg.asarray() File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testExtensionsSurvive (test_fileio.FileIOTests) check if extensions actually get safed to the file. ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 271, in testExtensionsSurvive self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testFromScratch (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 110, in testFromScratch n.save(self.fp.name) File "/<>/nifti/image.py", line 156, in save self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testIdempotentLoadSaveCycle (test_fileio.FileIOTests) check if file is unchanged by load/save cycle. ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 58, in testIdempotentLoadSaveCycle self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testMemoryMapping (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 134, in testMemoryMapping self.nimg.save(self.fp_plain.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testMetaReconstruction (test_fileio.FileIOTests) Check if the meta data gets properly reconstructed during ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 316, in testMetaReconstruction self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testPristineExtensions (test_fileio.FileIOTests) See whether extensions of variable length are loaded properly. ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 299, in testPristineExtensions self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testQFormSetting (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 167, in testQFormSetting self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testQFormSetting_fromArray (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 217, in testQFormSetting_fromArray nimg.save(self.fp.name) File "/<>/nifti/image.py", line 156, in save self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testQFormSetting_fromFile (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 178, in testQFormSetting_fromFile self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testUnicodeHandling (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 364, in testUnicodeHandling nim.save(outpath) File "/<>/nifti/image.py", line 156, in save self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testUnicodeLoadSaveCycle (test_fileio.FileIOTests) check load/save cycle for unicode filenames. ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 69, in testUnicodeLoadSaveCycle self.nimg.save( os.path.join( self.workdir, 'üöä.nii.gz') ) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: test_setPixDims (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 231, in test_setPixDims self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: test_setVoxDims (test_fileio.FileIOTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_fileio.py", line 252, in test_setVoxDims self.nimg.save(self.fp.name) File "/<>/nifti/image.py", line 165, in save self.updateCalMinMax() File "/<>/nifti/image.py", line 267, in updateCalMinMax self.raw_nimg.cal_max = float(self.data.max()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testMetaData (test_extensions.NiftiExtensionTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_extensions.py", line 59, in testMetaData nim2 = NiftiImage(nim.data, nim.header) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testArrayAssign (test_misc.MiscTests) Test whether the header is updated correctly when assigning a new ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_misc.py", line 50, in testArrayAssign self.failUnless(nimg.data.shape == alt_array.shape) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testCopying (test_misc.MiscTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_misc.py", line 60, in testCopying n2.data[0,3,4,2] = 543 File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ====================================================================== ERROR: testPickleCycle (test_misc.MiscTests) ---------------------------------------------------------------------- Traceback (most recent call last): File "/<>/tests/test_misc.py", line 96, in testPickleCycle self.failUnless((nim.data == nim2.data).all()) File "/<>/nifti/image.py", line 364, in getDataArray return self.asarray(False) File "/<>/nifti/image.py", line 376, in asarray self.load() File "/<>/nifti/image.py", line 241, in load if self._haveImageData(): File "/<>/nifti/image.py", line 231, in _haveImageData return (not self._data == None) ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() ---------------------------------------------------------------------- Ran 26 tests in 1.696s FAILED (errors=21) make[1]: Leaving directory '/<>' /usr/bin/make htmldoc make[1]: Entering directory '/<>' cd doc && PYTHONPATH=/<> /usr/bin/make html make[2]: Entering directory '/<>/doc' mkdir -p ../build/html ../build/doctrees sphinx-build -b html -d ../build/doctrees . ../build/html Running Sphinx v1.8.5 loading pickled environment... done building [mo]: targets for 0 po files that are out of date building [html]: targets for 0 source files that are out of date updating environment: 0 added, 0 changed, 0 removed looking for now-outdated files... none found no targets are out of date. build succeeded. The HTML pages are in ../build/html. Build finished. The HTML pages are in ../build/html. make[2]: Leaving directory '/<>/doc' make[1]: Leaving directory '/<>' Adding cdbs dependencies to debian/python-nifti.substvars dh_installdirs -ppython-nifti \ dh_installdirs: Compatibility levels before 9 are deprecated (level 5 in use) set -e; cd . && python setup.py install --root="/<>/debian/python-nifti" --install-layout=deb --no-compile -O0; running install running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "nifti._clib" sources build_src: building npy-pkg config files running build_py running build_ext customize UnixCCompiler customize UnixCCompiler using build_ext running build_scripts running install_lib creating /<>/debian/python-nifti/usr creating /<>/debian/python-nifti/usr/lib creating /<>/debian/python-nifti/usr/lib/python2.7 creating /<>/debian/python-nifti/usr/lib/python2.7/dist-packages creating /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti copying build/lib.linux-armv7l-2.7/nifti/nifticlib.py -> /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti copying build/lib.linux-armv7l-2.7/nifti/extensions.py -> /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti copying build/lib.linux-armv7l-2.7/nifti/format.py -> /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti copying build/lib.linux-armv7l-2.7/nifti/niftiformat.py -> /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti copying build/lib.linux-armv7l-2.7/nifti/utils.py -> /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti copying build/lib.linux-armv7l-2.7/nifti/niftiimage.py -> /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti copying build/lib.linux-armv7l-2.7/nifti/_clib.so -> /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti copying build/lib.linux-armv7l-2.7/nifti/__init__.py -> /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti copying build/lib.linux-armv7l-2.7/nifti/imgfx.py -> /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti copying build/lib.linux-armv7l-2.7/nifti/clib.py -> /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti copying build/lib.linux-armv7l-2.7/nifti/image.py -> /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/nifti running install_scripts creating /<>/debian/python-nifti/usr/bin copying build/scripts.linux-armv7l-2.7/pynifti_pst -> /<>/debian/python-nifti/usr/bin changing mode of /<>/debian/python-nifti/usr/bin/pynifti_pst to 775 running install_egg_info Writing /<>/debian/python-nifti/usr/lib/python2.7/dist-packages/pynifti-0.20100607.1.egg-info running install_clib customize UnixCCompiler dh_installdocs -ppython-nifti ./TODO build/html dh_installdocs: Compatibility levels before 9 are deprecated (level 5 in use) dh_installexamples -ppython-nifti dh_installexamples: Compatibility levels before 9 are deprecated (level 5 in use) dh_installman -ppython-nifti dh_installman: Compatibility levels before 9 are deprecated (level 5 in use) dh_installinfo -ppython-nifti dh_installinfo: Compatibility levels before 9 are deprecated (level 5 in use) dh_installmenu -ppython-nifti dh_installcron -ppython-nifti dh_systemd_enable -ppython-nifti dh_systemd_enable: Compatibility levels before 9 are deprecated (level 5 in use) dh_installinit -ppython-nifti dh_installinit: Compatibility levels before 9 are deprecated (level 5 in use) dh_installdebconf -ppython-nifti dh_installemacsen -ppython-nifti dh_installcatalogs -ppython-nifti dh_installpam -ppython-nifti dh_installlogrotate -ppython-nifti dh_installlogcheck -ppython-nifti dh_installchangelogs -ppython-nifti ./Changelog dh_installudev -ppython-nifti dh_lintian -ppython-nifti dh_bugfiles -ppython-nifti dh_install -ppython-nifti dh_install: Compatibility levels before 9 are deprecated (level 5 in use) dh_systemd_start -ppython-nifti dh_systemd_start: Compatibility levels before 9 are deprecated (level 5 in use) dh_link -ppython-nifti dh_link: Compatibility levels before 9 are deprecated (level 5 in use) dh_installmime -ppython-nifti dh_installgsettings -ppython-nifti dh_python2 -ppython-nifti I: dh_python2 tools:114: replacing shebang in debian/python-nifti/usr/bin/pynifti_pst I: dh_python2 fs:343: renaming _clib.so to _clib.arm-linux-gnueabihf.so dh_strip -ppython-nifti dh_strip: Compatibility levels before 9 are deprecated (level 5 in use) dh_strip_nondeterminism -ppython-nifti dh_compress -ppython-nifti -X .py -X .html -X .css -X .jpg -X .txt -X .js -X .json -X .rtc -X .par -X .bin -X objects.inv dh_compress: Compatibility levels before 9 are deprecated (level 5 in use) dh_fixperms -ppython-nifti dh_makeshlibs -ppython-nifti dh_makeshlibs: Compatibility levels before 9 are deprecated (level 5 in use) dh_installdeb -ppython-nifti dh_installdeb: Compatibility levels before 9 are deprecated (level 5 in use) dh_perl -ppython-nifti dh_shlibdeps -ppython-nifti dh_shlibdeps: Compatibility levels before 9 are deprecated (level 5 in use) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-nifti/usr/lib/python2.7/dist-packages/nifti/_clib.arm-linux-gnueabihf.so was not linked against libpthread.so.0 (it uses none of the library's symbols) dh_gencontrol -ppython-nifti dpkg-gencontrol: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file dpkg-gencontrol: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file # only call dh_scour for packages in main if grep -q '^Component:[[:space:]]*main' /CurrentlyBuilding 2>/dev/null; then dh_scour -ppython-nifti ; fi dh_md5sums -ppython-nifti dh_builddeb -ppython-nifti INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing python-nifti (in debian/python-nifti); do_strip: , oemstrip: pkgstriptranslations: processing python-nifti-dbgsym (in debian/.debhelper/python-nifti/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python-nifti/DEBIAN/control, package python-nifti, directory debian/python-nifti .. removing usr/share/doc/python-nifti/changelog.gz .. removing usr/share/doc/python-nifti/html/changelog.html pkgstripfiles: processing control file: debian/.debhelper/python-nifti/dbgsym-root/DEBIAN/control, package python-nifti-dbgsym, directory debian/.debhelper/python-nifti/dbgsym-root .. removing usr/share/doc/python-nifti/html/_sources/changelog.txt dpkg-deb: building package 'python-nifti-dbgsym' in 'debian/.debhelper/scratch-space/build-python-nifti/python-nifti-dbgsym_0.20100607.1-4.1build1_armhf.deb'. pkgstripfiles: Truncating usr/share/doc/python-nifti/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package python-nifti ... .. Renaming python-nifti-dbgsym_0.20100607.1-4.1build1_armhf.deb to python-nifti-dbgsym_0.20100607.1-4.1build1_armhf.ddeb .oo pkgstripfiles: PNG optimization (2/0) for package python-nifti took 19 s dpkg-deb: building package 'python-nifti' in '../python-nifti_0.20100607.1-4.1build1_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../pynifti_0.20100607.1-4.1build1_armhf.changes dpkg-genchanges: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-source: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20191217-1315 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ pynifti_0.20100607.1-4.1build1_armhf.changes: --------------------------------------------- Format: 1.8 Date: Tue, 17 Dec 2019 12:40:37 +0000 Source: pynifti Binary: python-nifti Architecture: armhf Version: 0.20100607.1-4.1build1 Distribution: focal-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: python-nifti - Python interface to the NIfTI I/O libraries Changes: pynifti (0.20100607.1-4.1build1) focal; urgency=medium . * No-change rebuild to generate dependencies on python2. Checksums-Sha1: 232301eae46a74276b742ca16ed8098d3f9d5bdd 8387 pynifti_0.20100607.1-4.1build1_armhf.buildinfo c16c8d579c5cc7a81a6d0d6ab9ed942d6abc4efc 90344 python-nifti-dbgsym_0.20100607.1-4.1build1_armhf.ddeb d1b61b2c22dd7c2adceaafd72035770b297abd1b 221872 python-nifti_0.20100607.1-4.1build1_armhf.deb Checksums-Sha256: d49f7adc11446f8e86a3331117484cf4accce52fdcc2c501fc67f0decaf69b8b 8387 pynifti_0.20100607.1-4.1build1_armhf.buildinfo 8b91c6466c31423d57637545a4e82b26bd2167ff90cd799bb4190ef039c1d60c 90344 python-nifti-dbgsym_0.20100607.1-4.1build1_armhf.ddeb f352a72980a7bdb7250b55346d9645f479d4945170bee9b4168f938db2087ba7 221872 python-nifti_0.20100607.1-4.1build1_armhf.deb Files: 4dc427b9d88d3f69b819c62fe48a22f0 8387 python optional pynifti_0.20100607.1-4.1build1_armhf.buildinfo 5d5ed0d9bd3e2ad2f53bc5073622ce08 90344 debug optional python-nifti-dbgsym_0.20100607.1-4.1build1_armhf.ddeb 80ca2fb0c40608bf0ba7acfa30c2c28c 221872 python optional python-nifti_0.20100607.1-4.1build1_armhf.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ python-nifti_0.20100607.1-4.1build1_armhf.deb --------------------------------------------- new debian package, version 2.0. size 221872 bytes: control archive=2476 bytes. 798 bytes, 17 lines control 4481 bytes, 54 lines md5sums 162 bytes, 9 lines * postinst #!/bin/sh 263 bytes, 14 lines * prerm #!/bin/sh Package: python-nifti Source: pynifti Version: 0.20100607.1-4.1build1 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: NeuroDebian Team Installed-Size: 1097 Depends: libc6 (>= 2.4), libnifti2, python2 (<< 2.8), python2 (>= 2.7~), python2:any (<< 2.8), python2:any (>= 2.7~), python-numpy, libjs-jquery Provides: python2.7-nifti Section: python Priority: optional Homepage: http://niftilib.sourceforge.net/pynifti/ Description: Python interface to the NIfTI I/O libraries Using PyNIfTI one can easily read and write NIfTI and ANALYZE images from within Python. The NiftiImage class provides Python-style access to the full header information. Image data is made available via NumPy arrays. Python-Version: 2.7 drwxr-xr-x root/root 0 2019-12-17 12:40 ./ drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/ drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/bin/ -rwxr-xr-x root/root 9497 2019-12-17 12:40 ./usr/bin/pynifti_pst drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/lib/ drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/lib/python2.7/dist-packages/ drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/lib/python2.7/dist-packages/nifti/ -rw-r--r-- root/root 972 2010-07-06 15:29 ./usr/lib/python2.7/dist-packages/nifti/__init__.py -rw-r--r-- root/root 288464 2019-12-17 12:40 ./usr/lib/python2.7/dist-packages/nifti/_clib.arm-linux-gnueabihf.so -rw-r--r-- root/root 53396 2019-12-17 12:40 ./usr/lib/python2.7/dist-packages/nifti/clib.py -rw-r--r-- root/root 8239 2010-07-06 15:23 ./usr/lib/python2.7/dist-packages/nifti/extensions.py -rw-r--r-- root/root 48435 2019-12-17 12:40 ./usr/lib/python2.7/dist-packages/nifti/format.py -rw-r--r-- root/root 22630 2010-07-06 15:23 ./usr/lib/python2.7/dist-packages/nifti/image.py -rw-r--r-- root/root 2777 2010-07-06 15:23 ./usr/lib/python2.7/dist-packages/nifti/imgfx.py -rw-r--r-- root/root 633 2010-07-06 15:23 ./usr/lib/python2.7/dist-packages/nifti/nifticlib.py -rw-r--r-- root/root 636 2010-07-06 15:23 ./usr/lib/python2.7/dist-packages/nifti/niftiformat.py -rw-r--r-- root/root 634 2010-07-06 15:23 ./usr/lib/python2.7/dist-packages/nifti/niftiimage.py -rw-r--r-- root/root 18103 2019-12-17 12:40 ./usr/lib/python2.7/dist-packages/nifti/utils.py -rw-r--r-- root/root 690 2019-12-17 12:40 ./usr/lib/python2.7/dist-packages/pynifti-0.20100607.1.egg-info drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/share/ drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/share/doc/python-nifti/ -rw-r--r-- root/root 2664 2019-12-17 12:40 ./usr/share/doc/python-nifti/TODO -rw-r--r-- root/root 1040 2019-12-17 12:40 ./usr/share/doc/python-nifti/changelog.Debian.gz -rw-r--r-- root/root 2410 2019-12-17 12:40 ./usr/share/doc/python-nifti/copyright drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/ -rw-r--r-- root/root 230 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/.buildinfo drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/_images/ -rw-r--r-- root/root 64313 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/_images/fslview_pst.png drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/_sources/ -rw-r--r-- root/root 183 2010-07-06 15:23 ./usr/share/doc/python-nifti/html/_sources/contents.txt -rw-r--r-- root/root 9842 2010-07-06 15:23 ./usr/share/doc/python-nifti/html/_sources/examples.txt -rw-r--r-- root/root 5828 2010-07-06 15:23 ./usr/share/doc/python-nifti/html/_sources/index.txt -rw-r--r-- root/root 15732 2010-07-06 15:23 ./usr/share/doc/python-nifti/html/_sources/installation.txt -rw-r--r-- root/root 6821 2010-07-06 15:23 ./usr/share/doc/python-nifti/html/_sources/intro.txt -rw-r--r-- root/root 1350 2010-07-06 15:23 ./usr/share/doc/python-nifti/html/_sources/legal.txt -rw-r--r-- root/root 622 2010-07-06 15:23 ./usr/share/doc/python-nifti/html/_sources/manual.txt -rw-r--r-- root/root 1793 2010-07-06 15:23 ./usr/share/doc/python-nifti/html/_sources/modref.txt drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/_static/ -rw-r--r-- root/root 9544 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/_static/alabaster.css -rw-r--r-- root/root 10912 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/_static/basic.css -rw-r--r-- root/root 42 2016-05-05 22:56 ./usr/share/doc/python-nifti/html/_static/custom.css -rw-r--r-- root/root 9313 2019-03-10 07:47 ./usr/share/doc/python-nifti/html/_static/doctools.js -rw-r--r-- root/root 316 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/_static/documentation_options.js -rw-r--r-- root/root 286 2019-03-09 14:07 ./usr/share/doc/python-nifti/html/_static/file.png -rw-r--r-- root/root 351 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/_static/item.png lrwxrwxrwx root/root 0 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/_static/jquery.js -> ../../../../javascript/jquery/jquery.js -rw-r--r-- root/root 10847 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/_static/language_data.js -rw-r--r-- root/root 90 2019-03-09 14:07 ./usr/share/doc/python-nifti/html/_static/minus.png -rw-r--r-- root/root 90 2019-03-09 14:07 ./usr/share/doc/python-nifti/html/_static/plus.png -rw-r--r-- root/root 4395 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/_static/pygments.css -rw-r--r-- root/root 8538 2010-07-06 15:23 ./usr/share/doc/python-nifti/html/_static/pynifti.css -rw-r--r-- root/root 15059 2019-03-10 07:47 ./usr/share/doc/python-nifti/html/_static/searchtools.js -rw-r--r-- root/root 58319 2018-05-31 21:11 ./usr/share/doc/python-nifti/html/_static/underscore.js -rw-r--r-- root/root 9761 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/contents.html -rw-r--r-- root/root 28690 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/examples.html -rw-r--r-- root/root 21853 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/genindex.html -rw-r--r-- root/root 13780 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/index.html -rw-r--r-- root/root 30063 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/installation.html -rw-r--r-- root/root 12960 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/intro.html -rw-r--r-- root/root 9898 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/legal.html -rw-r--r-- root/root 9599 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/manual.html -rw-r--r-- root/root 150866 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/modref.html -rw-r--r-- root/root 1286 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/objects.inv -rw-r--r-- root/root 4889 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/py-modindex.html -rw-r--r-- root/root 3835 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/search.html -rw-r--r-- root/root 20219 2019-12-17 12:40 ./usr/share/doc/python-nifti/html/searchindex.js drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/share/man/ drwxr-xr-x root/root 0 2019-12-17 12:40 ./usr/share/man/man1/ -rw-r--r-- root/root 1648 2019-12-17 12:40 ./usr/share/man/man1/pynifti_pst.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build-Space: 7340 Build-Time: 56 Distribution: focal-proposed Host Architecture: armhf Install-Time: 55 Job: pynifti_0.20100607.1-4.1build1.dsc Machine Architecture: arm64 Package: pynifti Package-Time: 113 Source-Version: 0.20100607.1-4.1build1 Space: 7340 Status: successful Version: 0.20100607.1-4.1build1 -------------------------------------------------------------------------------- Finished at 20191217-1315 Build needed 00:01:53, 7340k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18265198 Scanning for processes to kill in build PACKAGEBUILD-18265198