https://launchpad.net/ubuntu/+source/pytables/3.5.2-3ubuntu1/+build/17942970 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-043 4.4.0-165-generic #193-Ubuntu SMP Tue Sep 17 17:45:45 UTC 2019 aarch64 Buildd toolchain package versions: launchpad-buildd_178 python-lpbuildd_178 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 21 Oct 09:43:05 ntpdate[1944]: adjust time server 10.211.37.1 offset -0.033934 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-17942970 --image-type chroot /home/buildd/filecache-default/f005b6164729459c78307140747b338a2f357aa2 Creating target for build PACKAGEBUILD-17942970 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-17942970 Starting target for build PACKAGEBUILD-17942970 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-17942970 'deb http://ftpmaster.internal/ubuntu focal main universe' 'deb http://ftpmaster.internal/ubuntu focal-security main universe' 'deb http://ftpmaster.internal/ubuntu focal-updates main universe' 'deb http://ftpmaster.internal/ubuntu focal-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-17942970 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-17942970 Updating target for build PACKAGEBUILD-17942970 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [242 kB] Get:2 http://ftpmaster.internal/ubuntu focal-security InRelease [66.2 kB] Get:3 http://ftpmaster.internal/ubuntu focal-updates InRelease [66.2 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main armhf Packages [935 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main Translation-en [505 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe armhf Packages [8529 kB] Get:8 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5192 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main armhf Packages [77.5 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main Translation-en [46.9 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/universe armhf Packages [404 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/universe Translation-en [237 kB] Fetched 16.4 MB in 7s (2478 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libperl5.30 perl-modules-5.30 The following packages will be upgraded: base-files binutils binutils-arm-linux-gnueabihf binutils-common libapparmor1 libaudit-common libaudit1 libbinutils libcryptsetup12 libgcrypt20 libseccomp2 libselinux1 libsemanage-common libsemanage1 lsb-base perl perl-base 17 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 11.1 MB of archives. After this operation, 38.2 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main armhf base-files armhf 11ubuntu1 [60.1 kB] Get:2 http://ftpmaster.internal/ubuntu focal-proposed/main armhf perl-modules-5.30 all 5.30.0-7 [2738 kB] Get:3 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libperl5.30 armhf 5.30.0-7 [3295 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed/main armhf perl armhf 5.30.0-7 [224 kB] Get:5 http://ftpmaster.internal/ubuntu focal-proposed/main armhf perl-base armhf 5.30.0-7 [1407 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main armhf libaudit-common all 1:2.8.5-2ubuntu2 [4080 B] Get:7 http://ftpmaster.internal/ubuntu focal/main armhf libaudit1 armhf 1:2.8.5-2ubuntu2 [36.0 kB] Get:8 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libgcrypt20 armhf 1.8.5-3ubuntu1 [364 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libselinux1 armhf 2.9-2build1 [60.7 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main armhf libsemanage-common all 2.9-3build1 [9736 B] Get:11 http://ftpmaster.internal/ubuntu focal/main armhf libsemanage1 armhf 2.9-3build1 [73.7 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libseccomp2 armhf 2.4.1-0ubuntu0.19.10.4 [30.8 kB] Get:13 http://ftpmaster.internal/ubuntu focal-proposed/main armhf lsb-base all 11.1.0ubuntu1 [12.2 kB] Get:14 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libapparmor1 armhf 2.13.3-5ubuntu2 [29.6 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main armhf libcryptsetup12 armhf 2:2.2.1-1ubuntu1 [163 kB] Get:16 http://ftpmaster.internal/ubuntu focal-proposed/main armhf binutils-arm-linux-gnueabihf armhf 2.33.1-1ubuntu1 [2101 kB] Get:17 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libbinutils armhf 2.33.1-1ubuntu1 [315 kB] Get:18 http://ftpmaster.internal/ubuntu focal-proposed/main armhf binutils armhf 2.33.1-1ubuntu1 [3348 B] Get:19 http://ftpmaster.internal/ubuntu focal-proposed/main armhf binutils-common armhf 2.33.1-1ubuntu1 [203 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 11.1 MB in 2s (6246 kB/s) (Reading database ... 12487 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu1_armhf.deb ... Unpacking base-files (11ubuntu1) over (10.2ubuntu7) ... Setting up base-files (11ubuntu1) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Updating /root/.profile to current default. (Reading database ... 12487 files and directories currently installed.) Preparing to unpack .../perl_5.30.0-7_armhf.deb ... Unpacking perl (5.30.0-7) over (5.28.1-6build1) ... Replacing files in old package perl-base (5.28.1-6build1) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../perl-modules-5.30_5.30.0-7_all.deb ... Unpacking perl-modules-5.30 (5.30.0-7) ... Selecting previously unselected package libperl5.30:armhf. Preparing to unpack .../libperl5.30_5.30.0-7_armhf.deb ... Unpacking libperl5.30:armhf (5.30.0-7) ... Preparing to unpack .../perl-base_5.30.0-7_armhf.deb ... Unpacking perl-base (5.30.0-7) over (5.28.1-6build1) ... Setting up perl-base (5.30.0-7) ... (Reading database ... 14388 files and directories currently installed.) Preparing to unpack .../libaudit-common_1%3a2.8.5-2ubuntu2_all.deb ... Unpacking libaudit-common (1:2.8.5-2ubuntu2) over (1:2.8.5-2ubuntu1) ... Setting up libaudit-common (1:2.8.5-2ubuntu2) ... (Reading database ... 14388 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a2.8.5-2ubuntu2_armhf.deb ... Unpacking libaudit1:armhf (1:2.8.5-2ubuntu2) over (1:2.8.5-2ubuntu1) ... Setting up libaudit1:armhf (1:2.8.5-2ubuntu2) ... (Reading database ... 14388 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.8.5-3ubuntu1_armhf.deb ... Unpacking libgcrypt20:armhf (1.8.5-3ubuntu1) over (1.8.4-5ubuntu2) ... Setting up libgcrypt20:armhf (1.8.5-3ubuntu1) ... (Reading database ... 14388 files and directories currently installed.) Preparing to unpack .../libselinux1_2.9-2build1_armhf.deb ... Unpacking libselinux1:armhf (2.9-2build1) over (2.9-2) ... Setting up libselinux1:armhf (2.9-2build1) ... (Reading database ... 14388 files and directories currently installed.) Preparing to unpack .../libsemanage-common_2.9-3build1_all.deb ... Unpacking libsemanage-common (2.9-3build1) over (2.9-3) ... Setting up libsemanage-common (2.9-3build1) ... (Reading database ... 14388 files and directories currently installed.) Preparing to unpack .../libsemanage1_2.9-3build1_armhf.deb ... Unpacking libsemanage1:armhf (2.9-3build1) over (2.9-3) ... Setting up libsemanage1:armhf (2.9-3build1) ... (Reading database ... 14388 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.4.1-0ubuntu0.19.10.4_armhf.deb ... Unpacking libseccomp2:armhf (2.4.1-0ubuntu0.19.10.4) over (2.4.1-0ubuntu0.19.10.3) ... Setting up libseccomp2:armhf (2.4.1-0ubuntu0.19.10.4) ... (Reading database ... 14388 files and directories currently installed.) Preparing to unpack .../0-lsb-base_11.1.0ubuntu1_all.deb ... Unpacking lsb-base (11.1.0ubuntu1) over (11.0.1ubuntu1) ... Preparing to unpack .../1-libapparmor1_2.13.3-5ubuntu2_armhf.deb ... Unpacking libapparmor1:armhf (2.13.3-5ubuntu2) over (2.13.3-5ubuntu1) ... Preparing to unpack .../2-libcryptsetup12_2%3a2.2.1-1ubuntu1_armhf.deb ... Unpacking libcryptsetup12:armhf (2:2.2.1-1ubuntu1) over (2:2.2.0-3ubuntu1) ... Preparing to unpack .../3-binutils-arm-linux-gnueabihf_2.33.1-1ubuntu1_armhf.deb ... Unpacking binutils-arm-linux-gnueabihf (2.33.1-1ubuntu1) over (2.33-2ubuntu1) ... Preparing to unpack .../4-libbinutils_2.33.1-1ubuntu1_armhf.deb ... Unpacking libbinutils:armhf (2.33.1-1ubuntu1) over (2.33-2ubuntu1) ... Preparing to unpack .../5-binutils_2.33.1-1ubuntu1_armhf.deb ... Unpacking binutils (2.33.1-1ubuntu1) over (2.33-2ubuntu1) ... Preparing to unpack .../6-binutils-common_2.33.1-1ubuntu1_armhf.deb ... Unpacking binutils-common:armhf (2.33.1-1ubuntu1) over (2.33-2ubuntu1) ... Setting up lsb-base (11.1.0ubuntu1) ... Setting up libapparmor1:armhf (2.13.3-5ubuntu2) ... Setting up perl-modules-5.30 (5.30.0-7) ... Setting up binutils-common:armhf (2.33.1-1ubuntu1) ... Setting up libperl5.30:armhf (5.30.0-7) ... Setting up libcryptsetup12:armhf (2:2.2.1-1ubuntu1) ... Setting up libbinutils:armhf (2.33.1-1ubuntu1) ... Setting up binutils-arm-linux-gnueabihf (2.33.1-1ubuntu1) ... Setting up binutils (2.33.1-1ubuntu1) ... Setting up perl (5.30.0-7) ... Processing triggers for libc-bin (2.30-0ubuntu2) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-17942970 armhf focal-proposed -c chroot:build-PACKAGEBUILD-17942970 --arch=armhf --dist=focal-proposed --nolog pytables_3.5.2-3ubuntu1.dsc Initiating build PACKAGEBUILD-17942970 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-165-generic #193-Ubuntu SMP Tue Sep 17 17:45:45 UTC 2019 armv7l sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-043.buildd +==============================================================================+ | pytables 3.5.2-3ubuntu1 (armhf) 21 Oct 2019 09:43 | +==============================================================================+ Package: pytables Version: 3.5.2-3ubuntu1 Source Version: 3.5.2-3ubuntu1 Distribution: focal-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/pytables-HObvkh/pytables-3.5.2' with '<>' I: NOTICE: Log filtering will replace 'build/pytables-HObvkh' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-17942970/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- pytables_3.5.2-3ubuntu1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-lAr1Vq/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-lAr1Vq/apt_archive ./ InRelease Get:2 copy:/<>/resolver-lAr1Vq/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-lAr1Vq/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-lAr1Vq/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-lAr1Vq/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (128 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-lAr1Vq/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14387 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: cython, cython-dbg, cython3, cython3-dbg, debhelper-compat (= 12), dh-python, latexmk, libblosc-dev, libbz2-dev, libhdf5-dev, libjs-jquery-cookie, libjs-mathjax, liblz4-dev, liblzo2-dev, libsnappy-dev, libzstd-dev, locales, python-all-dev, python-all-dbg, python-mock, python-numexpr, python-numexpr-dbg, python-numpy, python-numpy-dbg, python-setuptools, python-six, python3-all-dev, python3-all-dbg, python3-ipython, python3-numexpr, python3-numexpr-dbg, python3-numpy, python3-numpy-dbg, python3-numpydoc, python3-sphinx, python3-sphinx-rtd-theme, python3-setuptools, python3-six, texlive-fonts-recommended, texlive-latex-recommended, texlive-latex-extra, texlive-plain-generic, zlib1g-dev Filtered Build-Depends: cython, cython-dbg, cython3, cython3-dbg, debhelper-compat (= 12), dh-python, latexmk, libblosc-dev, libbz2-dev, libhdf5-dev, libjs-jquery-cookie, libjs-mathjax, liblz4-dev, liblzo2-dev, libsnappy-dev, libzstd-dev, locales, python-all-dev, python-all-dbg, python-mock, python-numexpr, python-numexpr-dbg, python-numpy, python-numpy-dbg, python-setuptools, python-six, python3-all-dev, python3-all-dbg, python3-ipython, python3-numexpr, python3-numexpr-dbg, python3-numpy, python3-numpy-dbg, python3-numpydoc, python3-sphinx, python3-sphinx-rtd-theme, python3-setuptools, python3-six, texlive-fonts-recommended, texlive-latex-recommended, texlive-latex-extra, texlive-plain-generic, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-pytables-dummy' in '/<>/resolver-LiKIkU/apt_archive/sbuild-build-depends-pytables-dummy.deb'. Ign:1 copy:/<>/resolver-LiKIkU/apt_archive ./ InRelease Get:2 copy:/<>/resolver-LiKIkU/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-LiKIkU/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-LiKIkU/apt_archive ./ Sources [443 B] Get:5 copy:/<>/resolver-LiKIkU/apt_archive ./ Packages [774 B] Fetched 3336 B in 0s (136 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install pytables build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cython cython-dbg cython3 cython3-dbg debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fontconfig-config fonts-dejavu-core fonts-font-awesome fonts-lato fonts-lmodern fonts-mathjax fonts-roboto-slab gettext gettext-base groff-base hdf5-helpers intltool-debian latexmk libaec-dev libaec0 libarchive-zip-perl libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libblosc-dev libblosc1 libbrotli1 libbsd0 libbz2-dev libcairo2 libcroco3 libcups2 libcupsimage2 libdbus-1-3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libhdf5-103 libhdf5-cpp-103 libhdf5-dev libice6 libicu63 libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-cookie libjs-mathjax libjs-modernizr libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblapack3 liblz4-dev liblzo2-2 liblzo2-dev libmagic-mgc libmagic1 libmpdec2 libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpotrace0 libptexenc1 libpython-all-dbg libpython-all-dev libpython-dbg libpython-dev libpython-stdlib libpython2-dbg libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dbg libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dbg libpython3-all-dev libpython3-dbg libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dbg libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libpython3.8 libpython3.8-dbg libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libsigsegv2 libsm6 libsnappy-dev libsnappy1v5 libsub-override-perl libsynctex2 libsz2 libteckit0 libtexlua53 libtexluajit2 libtiff5 libtool libuchardet0 libwebp6 libwoff1 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzstd-dev libzzip-0-13 locales m4 man-db mime-support po-debconf poppler-data preview-latex-style python python-all python-all-dbg python-all-dev python-babel-localedata python-dbg python-dev python-funcsigs python-minimal python-mock python-numexpr python-numexpr-dbg python-numpy python-numpy-dbg python-pbr python-pkg-resources python-setuptools python-six python2 python2-dbg python2-dev python2-minimal python2.7 python2.7-dbg python2.7-dev python2.7-minimal python3 python3-alabaster python3-all python3-all-dbg python3-all-dev python3-attr python3-babel python3-certifi python3-chardet python3-dbg python3-decorator python3-dev python3-distutils python3-docutils python3-idna python3-imagesize python3-ipython python3-ipython-genutils python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal python3-numexpr python3-numexpr-dbg python3-numpy python3-numpy-dbg python3-numpydoc python3-packaging python3-pexpect python3-pickleshare python3-pkg-resources python3-prompt-toolkit python3-ptyprocess python3-pygments python3-pyparsing python3-requests python3-roman python3-setuptools python3-simplegeneric python3-six python3-sphinx python3-sphinx-rtd-theme python3-traitlets python3-tz python3-urllib3 python3-wcwidth python3.7 python3.7-dbg python3.7-dev python3.7-minimal python3.8 python3.8-dbg python3.8-dev python3.8-minimal sgml-base sphinx-common sphinx-rtd-theme-common t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures texlive-plain-generic ucf x11-common xdg-utils xml-core zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cython-doc dh-make fonts-roboto gettext-doc libasprintf-dev libgettextpo-dev groff ghostscript cups-common krb5-doc krb5-user libhdf5-doc fonts-mathjax-extras fonts-stix libjs-mathjax-doc python2.7-gdbm-dbg python2.7-tk-dbg libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum python-doc python-tk python-funcsigs-doc python-mock-doc gfortran python-pytest python-numpy-doc python-setuptools-doc python2-doc python2.7-doc python-gdbm-dbg python-tk-dbg binfmt-support python3-doc python3-tk python3-venv python-attr-doc docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french python-jinja2-doc python3-pytest python-pexpect-doc python-pygments-doc ttf-bitstream-vera python-pyparsing-doc python3-cryptography python3-openssl python3-socks dvipng imagemagick-6.q16 python3-stemmer sphinx-doc python3.7-venv python3.7-doc python3-gdbm-dbg python3-tk-dbg python3.8-venv python3.8-doc sgml-base-doc gv | postscript-viewer perl-tk xpdf | pdf-viewer texlive-fonts-recommended-doc texlive-latex-base-doc python-pygments icc-profiles libfile-which-perl libspreadsheet-parseexcel-perl texlive-latex-extra-doc texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk | libtcltk-ruby texlive-pictures-doc vprerex default-jre-headless Recommended packages: curl | wget | lynx xpdf | pdf-viewer gv | postscript-viewer bzip2-doc libcupsfilters1 dbus libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback javascript-common krb5-locales libltdl-dev libmail-sendmail-perl python3-pil gdb lmodern tex-gyre tipa ruby | ruby-interpreter tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cython cython-dbg cython3 cython3-dbg debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fontconfig-config fonts-dejavu-core fonts-font-awesome fonts-lato fonts-lmodern fonts-mathjax fonts-roboto-slab gettext gettext-base groff-base hdf5-helpers intltool-debian latexmk libaec-dev libaec0 libarchive-zip-perl libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libblosc-dev libblosc1 libbrotli1 libbsd0 libbz2-dev libcairo2 libcroco3 libcups2 libcupsimage2 libdbus-1-3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libhdf5-103 libhdf5-cpp-103 libhdf5-dev libice6 libicu63 libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-cookie libjs-mathjax libjs-modernizr libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblapack3 liblz4-dev liblzo2-2 liblzo2-dev libmagic-mgc libmagic1 libmpdec2 libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpotrace0 libptexenc1 libpython-all-dbg libpython-all-dev libpython-dbg libpython-dev libpython-stdlib libpython2-dbg libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dbg libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dbg libpython3-all-dev libpython3-dbg libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dbg libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libpython3.8 libpython3.8-dbg libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libsigsegv2 libsm6 libsnappy-dev libsnappy1v5 libsub-override-perl libsynctex2 libsz2 libteckit0 libtexlua53 libtexluajit2 libtiff5 libtool libuchardet0 libwebp6 libwoff1 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzstd-dev libzzip-0-13 locales m4 man-db mime-support po-debconf poppler-data preview-latex-style python python-all python-all-dbg python-all-dev python-babel-localedata python-dbg python-dev python-funcsigs python-minimal python-mock python-numexpr python-numexpr-dbg python-numpy python-numpy-dbg python-pbr python-pkg-resources python-setuptools python-six python2 python2-dbg python2-dev python2-minimal python2.7 python2.7-dbg python2.7-dev python2.7-minimal python3 python3-alabaster python3-all python3-all-dbg python3-all-dev python3-attr python3-babel python3-certifi python3-chardet python3-dbg python3-decorator python3-dev python3-distutils python3-docutils python3-idna python3-imagesize python3-ipython python3-ipython-genutils python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal python3-numexpr python3-numexpr-dbg python3-numpy python3-numpy-dbg python3-numpydoc python3-packaging python3-pexpect python3-pickleshare python3-pkg-resources python3-prompt-toolkit python3-ptyprocess python3-pygments python3-pyparsing python3-requests python3-roman python3-setuptools python3-simplegeneric python3-six python3-sphinx python3-sphinx-rtd-theme python3-traitlets python3-tz python3-urllib3 python3-wcwidth python3.7 python3.7-dbg python3.7-dev python3.7-minimal python3.8 python3.8-dbg python3.8-dev python3.8-minimal sbuild-build-depends-pytables-dummy sgml-base sphinx-common sphinx-rtd-theme-common t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures texlive-plain-generic ucf x11-common xdg-utils xml-core zlib1g-dev 0 upgraded, 266 newly installed, 0 to remove and 0 not upgraded. Need to get 384 MB of archives. After this operation, 1185 MB of additional disk space will be used. 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armhf libpython3.8-dbg armhf 3.8.0-2 [12.6 MB] Get:182 http://ftpmaster.internal/ubuntu focal/main armhf libzstd-dev armhf 1.4.3+dfsg-1 [254 kB] Get:183 http://ftpmaster.internal/ubuntu focal/main armhf preview-latex-style all 11.91-2ubuntu1 [185 kB] Get:184 http://ftpmaster.internal/ubuntu focal/universe armhf python-all armhf 2.7.17-1 [1088 B] Get:185 http://ftpmaster.internal/ubuntu focal-proposed/universe armhf python2.7-dev armhf 2.7.17-1 [279 kB] Get:186 http://ftpmaster.internal/ubuntu focal/universe armhf python2-dev armhf 2.7.17-1 [1268 B] Get:187 http://ftpmaster.internal/ubuntu focal/universe armhf python-dev armhf 2.7.17-1 [1240 B] Get:188 http://ftpmaster.internal/ubuntu focal/universe armhf python-all-dev armhf 2.7.17-1 [1112 B] Get:189 http://ftpmaster.internal/ubuntu focal/main armhf python-babel-localedata all 2.6.0+dfsg.1-1 [4071 kB] Get:190 http://ftpmaster.internal/ubuntu focal/universe armhf python-funcsigs all 1.0.2-4 [13.5 kB] Get:191 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libpython3.7-dbg armhf 3.7.5-1ubuntu1 [10.9 MB] Get:201 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3-dbg armhf 3.7.5-1ubuntu1 [6884 B] Get:202 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3-all-dbg armhf 3.7.5-1ubuntu1 [1124 B] Get:203 http://ftpmaster.internal/ubuntu focal/main armhf python3.7-dbg armhf 3.7.5-1ubuntu1 [15.5 MB] Get:204 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3-dbg armhf 3.7.5-1ubuntu1 [1352 B] Get:205 http://ftpmaster.internal/ubuntu focal/main armhf python3.8-dbg armhf 3.8.0-2 [18.2 MB] Get:206 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3-all-dbg armhf 3.7.5-1ubuntu1 [1128 B] Get:207 http://ftpmaster.internal/ubuntu focal/main armhf python3.7-dev armhf 3.7.5-1ubuntu1 [514 kB] Get:208 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3-dev armhf 3.7.5-1ubuntu1 [1316 B] Get:209 http://ftpmaster.internal/ubuntu focal/main armhf python3.8-dev armhf 3.8.0-2 [511 kB] Get:210 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3-all-dev armhf 3.7.5-1ubuntu1 [1128 B] Get:211 http://ftpmaster.internal/ubuntu focal/main armhf python3-attr all 18.2.0-1 [29.6 kB] Get:212 http://ftpmaster.internal/ubuntu focal/main armhf python3-tz all 2019.2-1 [24.5 kB] Get:213 http://ftpmaster.internal/ubuntu focal/main armhf python3-babel all 2.6.0+dfsg.1-1 [83.4 kB] Get:214 http://ftpmaster.internal/ubuntu focal/main armhf python3-certifi all 2018.8.24-1 [140 kB] Get:215 http://ftpmaster.internal/ubuntu focal/main armhf python3-chardet all 3.0.4-4 [80.6 kB] Get:216 http://ftpmaster.internal/ubuntu focal/main armhf python3-decorator all 4.3.0-1.1 [9600 B] Get:217 http://ftpmaster.internal/ubuntu focal/main armhf python3-roman all 2.0.0-3 [8624 B] Get:218 http://ftpmaster.internal/ubuntu focal/main armhf python3-docutils all 0.15.2+dfsg-1 [366 kB] Get:219 http://ftpmaster.internal/ubuntu focal/main armhf python3-idna all 2.6-2 [32.6 kB] Get:220 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configuration, since apt-utils is not installed Fetched 384 MB in 16s (23.9 MB/s) Selecting previously unselected package libpython3.7-minimal:armhf. 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Setting up libarchive-zip-perl (1.65-1) ... Setting up libglib2.0-0:armhf (2.62.1-1) ... No schema files found: doing nothing. Setting up libijs-0.35:armhf (0.35-15) ... Setting up libtexluajit2:armhf (2019.20190605.51237-2build1) ... Setting up libdebhelper-perl (12.6.1ubuntu2) ... Setting up libbrotli1:armhf (1.0.7-2build1) ... Setting up x11-common (1:7.7+19ubuntu12) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libmagic1:armhf (1:5.37-5) ... Setting up fonts-roboto-slab (1.100263+20170512-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up liblzo2-2:armhf (2.10-0.1) ... Setting up libzzip-0-13:armhf (0.13.62-3.2) ... Setting up file (1:5.37-5) ... Setting up locales (2.30-0ubuntu2) ... Generating locales (this might take a while)... Generation complete. Setting up libjs-modernizr (2.6.2+ds1-3ubuntu1) ... Setting up libjbig0:armhf (2.1-3.1build1) ... Setting up libaec0:armhf (1.0.4-1) ... Setting up libicu63:armhf (63.2-2) ... Setting up python-babel-localedata (2.6.0+dfsg.1-1) ... Setting up libsnappy1v5:armhf (1.1.7-1) ... Setting up poppler-data (0.4.9-2) ... Setting up libkrb5support0:armhf (1.17-6) ... Setting up libpython2.7-stdlib:armhf (2.7.17-1) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:armhf (3.8.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libexpat1-dev:armhf (2.2.7-2) ... Setting up libfreetype6:armhf (2.9.1-4) ... Setting up libx11-data (2:1.6.8-1) ... Setting up libjbig2dec0:armhf (0.16-1) ... Setting up libidn11:armhf (1.33-2.2ubuntu2) ... Setting up libteckit0:armhf (2.5.8+ds2-5ubuntu1) ... Setting up libavahi-common-data:armhf (0.7-4ubuntu5) ... Setting up libdbus-1-3:armhf (1.12.14-1ubuntu2) ... Setting up libsigsegv2:armhf (2.12-2) ... Setting up t1utils (1.41-3) ... Setting up autopoint (0.19.8.1-9) ... Setting up libwebp6:armhf (0.6.1-2) ... Setting up liblz4-dev:armhf (1.9.1-1) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up ucf (3.0038+nmu1) ... Setting up libk5crypto3:armhf (1.17-6) ... Setting up libjpeg-turbo8:armhf (2.0.3-0ubuntu1) ... Setting up libpython2.7-dbg:armhf (2.7.17-1) ... Setting up libkpathsea6:armhf (2019.20190605.51237-2build1) ... Setting up libgfortran5:armhf (9.2.1-9ubuntu2) ... Setting up liblzo2-dev:armhf (2.10-0.1) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1ubuntu3) ... Setting up python3.8-minimal (3.8.0-2) ... Setting up libxxhash0:armhf (0.7.0-2) ... Setting up libuchardet0:armhf (0.0.6-3) ... Setting up libblosc1 (1.15.1+ds1-1) ... Setting up fonts-lmodern (2.004.5-6) ... Setting up libsub-override-perl (0.09-2) ... Setting up libharfbuzz0b:armhf (2.6.1-3) ... Setting up sgml-base (1.29) ... Setting up libkrb5-3:armhf (1.17-6) ... Setting up libmpdec2:armhf (2.4.2-2) ... Setting up libjs-jquery (3.3.1~dfsg-3) ... Setting up libpython3.8-stdlib:armhf (3.8.0-2) ... Setting up python3.8 (3.8.0-2) ... Setting up libbsd0:armhf (0.10.0-1) ... Setting up libelf1:armhf (0.176-1.1) ... Setting up libxml2:armhf (2.9.4+dfsg1-7ubuntu4) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-1) ... Setting up sphinx-rtd-theme-common (0.4.3+dfsg-1) ... Setting up xdg-utils (1.1.3-1ubuntu2) ... Setting up libsz2:armhf (1.0.4-1) ... Setting up libsynctex2:armhf (2019.20190605.51237-2build1) ... Setting up libjs-underscore (1.9.1~dfsg-1) ... Setting up libbz2-dev:armhf (1.0.6-9.2) ... Setting up libpotrace0:armhf (1.15-1) ... Setting up libjpeg8:armhf (8c-2ubuntu8) ... Setting up libfile-stripnondeterminism-perl (1.6.0-1) ... Setting up libpaper1:armhf (1.1.28) ... Creating config file /etc/papersize with new version Setting up libjs-jquery-cookie (12-1.1) ... Setting up libice6:armhf (2:1.0.10-0ubuntu1) ... Setting up libjpeg-turbo8-dev:armhf (2.0.3-0ubuntu1) ... Setting up libxdmcp6:armhf (1:1.1.3-0ubuntu1) ... Setting up libpython3.7-stdlib:armhf (3.7.5-1ubuntu1) ... Setting up libpython2.7:armhf (2.7.17-1) ... Setting up liblapack3:armhf (3.8.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libpython2.7-dev:armhf (2.7.17-1) ... Setting up libxcb1:armhf (1.13.1-2) ... Setting up libharfbuzz-icu0:armhf (2.6.1-3) ... Setting up python2.7 (2.7.17-1) ... Setting up libpython2-dbg:armhf (2.7.17-1) ... Setting up libwoff1:armhf (1.0.2-1build1) ... Setting up libpython3.7:armhf (3.7.5-1ubuntu1) ... Setting up libtool (2.4.6-11) ... Setting up libpython2-stdlib:armhf (2.7.17-1) ... Setting up libblosc-dev (1.15.1+ds1-1) ... Setting up libxcb-render0:armhf (1.13.1-2) ... Setting up fontconfig-config (2.13.1-2ubuntu2) ... Setting up libpython3.7-dev:armhf (3.7.5-1ubuntu1) ... Setting up libpython3.8-dbg:armhf (3.8.0-2) ... Setting up libsnappy-dev:armhf (1.1.7-1) ... Setting up libaec-dev:armhf (1.0.4-1) ... Setting up libavahi-common3:armhf (0.7-4ubuntu5) ... Setting up m4 (1.4.18-2) ... Setting up python2.7-dbg (2.7.17-1) ... Setting up libxcb-shm0:armhf (1.13.1-2) ... Setting up libpaper-utils (1.1.28) ... Setting up python2 (2.7.17-1) ... Setting up tex-common (6.12) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libpython-stdlib:armhf (2.7.17-1) ... Setting up libptexenc1:armhf (2019.20190605.51237-2build1) ... Setting up libpython3.7-dbg:armhf (3.7.5-1ubuntu1) ... Setting up libpython3.8:armhf (3.8.0-2) ... Setting up libhdf5-103:armhf (1.10.4+repack-10) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:armhf (1.17-6) ... Setting up libcroco3:armhf (0.6.13-1) ... Setting up libjs-sphinxdoc (1.8.5-3) ... Setting up autoconf (2.69-11ubuntu1) ... Setting up dwz (0.13-1) ... Setting up groff-base (1.22.4-3) ... Setting up xml-core (0.18+nmu1) ... Setting up libx11-6:armhf (2:1.6.8-1) ... Setting up libpython-dbg:armhf (2.7.17-1) ... Setting up libpython2-dev:armhf (2.7.17-1) ... Setting up libtiff5:armhf (4.0.10+git191003-1) ... Setting up libfontconfig1:armhf (2.13.1-2ubuntu2) ... Setting up libjpeg8-dev:armhf (8c-2ubuntu8) ... Setting up libsm6:armhf (2:1.2.3-1) ... Setting up python (2.7.17-1) ... Setting up libpython-all-dbg:armhf (2.7.17-1) ... Setting up libavahi-client3:armhf (0.7-4ubuntu5) ... Setting up libpython3-stdlib:armhf (3.7.5-1ubuntu1) ... Setting up python2.7-dev (2.7.17-1) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.8-dbg (3.8.0-2) ... Setting up python3.7 (3.7.5-1ubuntu1) ... Setting up cython (0.29.13-0ubuntu2) ... Setting up python3.7-dbg (3.7.5-1ubuntu1) ... Setting up gettext (0.19.8.1-9) ... Setting up libpython3-dev:armhf (3.7.5-1ubuntu1) ... Setting up python2-dev (2.7.17-1) ... Setting up libxpm4:armhf (1:3.5.12-1) ... Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up python-pkg-resources (41.1.0-1) ... Setting up preview-latex-style (11.91-2ubuntu1) ... Setting up libhdf5-cpp-103:armhf (1.10.4+repack-10) ... Setting up libjpeg-dev:armhf (8c-2ubuntu8) ... Setting up libxext6:armhf (2:1.3.4-0ubuntu1) ... Setting up libpython3-dbg:armhf (3.7.5-1ubuntu1) ... Setting up python2-dbg (2.7.17-1) ... Setting up python3 (3.7.5-1ubuntu1) ... Setting up libpython3-all-dbg:armhf (3.7.5-1ubuntu1) ... Setting up python-all (2.7.17-1) ... Setting up man-db (2.8.7-3) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3-markupsafe (1.1.0-1build1) ... Setting up python3.7-dev (3.7.5-1ubuntu1) ... Setting up libcairo2:armhf (1.16.0-4) ... Setting up python3-tz (2019.2-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libpython-dev:armhf (2.7.17-1) ... Setting up cython-dbg (0.29.13-0ubuntu2) ... Setting up python-six (1.12.0-2build1) ... Setting up python3-six (1.12.0-2build1) ... Setting up python3-roman (2.0.0-3) ... Setting up python3-decorator (4.3.0-1.1) ... Setting up python3-jinja2 (2.10-2ubuntu1) ... Setting up python3-pygments (2.3.1+dfsg-1ubuntu1) ... Setting up python3-wcwidth (0.1.7+dfsg1-6) ... Setting up python3-pyparsing (2.2.0+dfsg1-2) ... Setting up python3-certifi (2018.8.24-1) ... Setting up libpython3.8-dev:armhf (3.8.0-2) ... Setting up libpython3-all-dev:armhf (3.7.5-1ubuntu1) ... Setting up sphinx-common (1.8.5-3) ... Setting up libhdf5-dev (1.10.4+repack-10) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-idna (2.6-2) ... Setting up cython3 (0.29.13-0ubuntu2) ... Setting up python-setuptools (41.1.0-1) ... Setting up libxt6:armhf (1:1.1.5-1) ... Setting up python3-pickleshare (0.7.5-1) ... Setting up cython3-dbg (0.29.13-0ubuntu2) ... Setting up python3-urllib3 (1.24.1-1ubuntu1) ... Setting up python3.8-dev (3.8.0-2) ... Setting up libcups2:armhf (2.2.12-2ubuntu1) ... Setting up python-funcsigs (1.0.2-4) ... Setting up python-pbr (5.1.1-0ubuntu4) ... update-alternatives: using /usr/bin/python2-pbr to provide /usr/bin/pbr (pbr) in auto mode Setting up python3-simplegeneric (0.8.1-2) ... Setting up python3-lib2to3 (3.7.5-1build1) ... Setting up python-dev (2.7.17-1) ... Setting up python3-imagesize (1.0.0-1) ... Setting up python3-ptyprocess (0.6.0-1) ... Setting up python3-dbg (3.7.5-1ubuntu1) ... Setting up python3-pkg-resources (41.1.0-1) ... Setting up python3-prompt-toolkit (1.0.15-1) ... Setting up python3-distutils (3.7.5-1build1) ... Setting up dh-python (4.20191017ubuntu1) ... Setting up python3-attr (18.2.0-1) ... Setting up libxmu6:armhf (2:1.1.3-0ubuntu1) ... Setting up python3-setuptools (41.1.0-1) ... Setting up libxi6:armhf (2:1.7.10-0ubuntu1) ... Setting up libpython-all-dev:armhf (2.7.17-1) ... Setting up python-numpy (1:1.16.5-1ubuntu2) ... Setting up python3-babel (2.6.0+dfsg.1-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python-dbg (2.7.17-1) ... Setting up python3-ipython-genutils (0.2.0-1) ... Setting up python3-alabaster (0.7.8-1) ... Setting up po-debconf (1.0.21) ... Setting up python-numexpr (2.7.0-1build1) ... Setting up python-numpy-dbg:armhf (1:1.16.5-1ubuntu2) ... Setting up python3-all (3.7.5-1ubuntu1) ... Setting up libxaw7:armhf (2:1.0.13-1) ... Setting up libcupsimage2:armhf (2.2.12-2ubuntu1) ... Setting up python-mock (3.0.5-1) ... Setting up python3-packaging (19.1-2) ... Setting up python3-chardet (3.0.4-4) ... Setting up python3-pexpect (4.6.0-1) ... Setting up python3-dev (3.7.5-1ubuntu1) ... Setting up python3-requests (2.21.0-1) ... Setting up python-all-dbg (2.7.17-1) ... Setting up python3-numpy (1:1.17.3-0ubuntu1) ... Setting up python3-traitlets (4.3.2-1) ... /usr/lib/python3/dist-packages/traitlets/config/loader.py:795: SyntaxWarning: "is" with a literal. Did you mean "=="? if len(key) is 1: /usr/lib/python3/dist-packages/traitlets/config/loader.py:804: SyntaxWarning: "is" with a literal. Did you mean "=="? if len(key) is 1: Setting up python-numexpr-dbg (2.7.0-1build1) ... Setting up python3-all-dbg (3.7.5-1ubuntu1) ... Setting up python-all-dev (2.7.17-1) ... Setting up python3-all-dev (3.7.5-1ubuntu1) ... Setting up libgs9:armhf (9.27~dfsg+0-0ubuntu3) ... Setting up python3-numpy-dbg:armhf (1:1.17.3-0ubuntu1) ... Setting up python3-ipython (5.8.0-1) ... Setting up python3-numexpr (2.7.0-1build1) ... Setting up texlive-binaries (2019.20190605.51237-2build1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2019.20190710-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex Setting up python3-numexpr-dbg (2.7.0-1build1) ... Setting up texlive-plain-generic (2019.20190710-1) ... Setting up texlive-latex-base (2019.20190710-1) ... Setting up texlive-latex-recommended (2019.20190710-1) ... Setting up texlive-pictures (2019.20190710-1) ... Setting up texlive-fonts-recommended (2019.20190710-1) ... Setting up latexmk (1:4.65-0.2) ... Setting up texlive-latex-extra (2019.20190710-1) ... Setting up debhelper (12.6.1ubuntu2) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.6.0-1) ... Processing triggers for libc-bin (2.30-0ubuntu2) ... Processing triggers for systemd (242-7ubuntu3) ... Processing triggers for sgml-base (1.29) ... Setting up docutils-common (0.15.2+dfsg-1) ... Processing triggers for sgml-base (1.29) ... Setting up python3-docutils (0.15.2+dfsg-1) ... update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python3-sphinx (1.8.5-3) ... update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode Setting up python3-sphinx-rtd-theme (0.4.3+dfsg-1) ... Setting up python3-numpydoc (0.7.0-1) ... Setting up sbuild-build-depends-pytables-dummy (0.invalid.0) ... Processing triggers for tex-common (6.12) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-165-generic arm64 (armv7l) Toolchain package versions: binutils_2.33.1-1ubuntu1 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-9ubuntu2 gcc-9_9.2.1-9ubuntu2 libc6-dev_2.30-0ubuntu2 libstdc++-9-dev_9.2.1-9ubuntu2 libstdc++6_9.2.1-9ubuntu2 linux-libc-dev_5.3.0-18.19 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.4 autoconf_2.69-11ubuntu1 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11ubuntu1 base-passwd_3.5.46 bash_5.0-4ubuntu1 binutils_2.33.1-1ubuntu1 binutils-arm-linux-gnueabihf_2.33.1-1ubuntu1 binutils-common_2.33.1-1ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu2 build-essential_12.8ubuntu1 bzip2_1.0.6-9.2 ca-certificates_20190110 coreutils_8.30-3ubuntu2 cpp_4:9.2.1-3.1ubuntu1 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openssl_1.1.1c-1ubuntu4 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu4 patch_2.7.6-6 perl_5.30.0-7 perl-base_5.30.0-7 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-7 pinentry-curses_1.1.0-3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 poppler-data_0.4.9-2 preview-latex-style_11.91-2ubuntu1 procps_2:3.3.15-2ubuntu3 python_2.7.17-1 python-all_2.7.17-1 python-all-dbg_2.7.17-1 python-all-dev_2.7.17-1 python-babel-localedata_2.6.0+dfsg.1-1 python-dbg_2.7.17-1 python-dev_2.7.17-1 python-funcsigs_1.0.2-4 python-minimal_2.7.17-1 python-mock_3.0.5-1 python-numexpr_2.7.0-1build1 python-numexpr-dbg_2.7.0-1build1 python-numpy_1:1.16.5-1ubuntu2 python-numpy-dbg_1:1.16.5-1ubuntu2 python-pbr_5.1.1-0ubuntu4 python-pkg-resources_41.1.0-1 python-setuptools_41.1.0-1 python-six_1.12.0-2build1 python2_2.7.17-1 python2-dbg_2.7.17-1 python2-dev_2.7.17-1 python2-minimal_2.7.17-1 python2.7_2.7.17-1 python2.7-dbg_2.7.17-1 python2.7-dev_2.7.17-1 python2.7-minimal_2.7.17-1 python3_3.7.5-1ubuntu1 python3-alabaster_0.7.8-1 python3-all_3.7.5-1ubuntu1 python3-all-dbg_3.7.5-1ubuntu1 python3-all-dev_3.7.5-1ubuntu1 python3-attr_18.2.0-1 python3-babel_2.6.0+dfsg.1-1 python3-certifi_2018.8.24-1 python3-chardet_3.0.4-4 python3-dbg_3.7.5-1ubuntu1 python3-decorator_4.3.0-1.1 python3-dev_3.7.5-1ubuntu1 python3-distutils_3.7.5-1build1 python3-docutils_0.15.2+dfsg-1 python3-idna_2.6-2 python3-imagesize_1.0.0-1 python3-ipython_5.8.0-1 python3-ipython-genutils_0.2.0-1 python3-jinja2_2.10-2ubuntu1 python3-lib2to3_3.7.5-1build1 python3-markupsafe_1.1.0-1build1 python3-minimal_3.7.5-1ubuntu1 python3-numexpr_2.7.0-1build1 python3-numexpr-dbg_2.7.0-1build1 python3-numpy_1:1.17.3-0ubuntu1 python3-numpy-dbg_1:1.17.3-0ubuntu1 python3-numpydoc_0.7.0-1 python3-packaging_19.1-2 python3-pexpect_4.6.0-1 python3-pickleshare_0.7.5-1 python3-pkg-resources_41.1.0-1 python3-prompt-toolkit_1.0.15-1 python3-ptyprocess_0.6.0-1 python3-pygments_2.3.1+dfsg-1ubuntu1 python3-pyparsing_2.2.0+dfsg1-2 python3-requests_2.21.0-1 python3-roman_2.0.0-3 python3-setuptools_41.1.0-1 python3-simplegeneric_0.8.1-2 python3-six_1.12.0-2build1 python3-sphinx_1.8.5-3 python3-sphinx-rtd-theme_0.4.3+dfsg-1 python3-traitlets_4.3.2-1 python3-tz_2019.2-1 python3-urllib3_1.24.1-1ubuntu1 python3-wcwidth_0.1.7+dfsg1-6 python3.7_3.7.5-1ubuntu1 python3.7-dbg_3.7.5-1ubuntu1 python3.7-dev_3.7.5-1ubuntu1 python3.7-minimal_3.7.5-1ubuntu1 python3.8_3.8.0-2 python3.8-dbg_3.8.0-2 python3.8-dev_3.8.0-2 python3.8-minimal_3.8.0-2 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-pytables-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sgml-base_1.29 sphinx-common_1.8.5-3 sphinx-rtd-theme-common_0.4.3+dfsg-1 systemd_242-7ubuntu3 systemd-sysv_242-7ubuntu3 sysvinit-utils_2.95-5ubuntu2 t1utils_1.41-3 tar_1.30+dfsg-6 tex-common_6.12 texlive-base_2019.20190710-1 texlive-binaries_2019.20190605.51237-2build1 texlive-fonts-recommended_2019.20190710-1 texlive-latex-base_2019.20190710-1 texlive-latex-extra_2019.20190710-1 texlive-latex-recommended_2019.20190710-1 texlive-pictures_2019.20190710-1 texlive-plain-generic_2019.20190710-1 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 util-linux_2.34-0.1ubuntu2 x11-common_1:7.7+19ubuntu12 xdg-utils_1.1.3-1ubuntu2 xml-core_0.18+nmu1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 zlib1g-dev_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Oct 21 09:25:47 2019 UTC gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./pytables_3.5.2-3ubuntu1.dsc dpkg-source: info: extracting pytables in pytables-3.5.2 dpkg-source: info: unpacking pytables_3.5.2.orig.tar.gz dpkg-source: info: unpacking pytables_3.5.2-3ubuntu1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-use-dynamic-lib.patch dpkg-source: info: applying 0002-Never-use-the-msse2-flag-explicitly.patch dpkg-source: info: applying 0003-use-local-mathjax.patch dpkg-source: info: applying 0004-remove-gtags.patch dpkg-source: info: applying 0005-Drop-mock-for-requirements.txt.patch dpkg-source: info: applying 0006-Skip-index-backcompat-tests-on-bingendian.patch dpkg-source: info: applying python3.8-fix.diff Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-17942970 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-17942970 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-17942970 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package pytables dpkg-buildpackage: info: source version 3.5.2-3ubuntu1 dpkg-buildpackage: info: source distribution focal dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --with python2,python3,sphinxdoc --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' # Avoid unnecessary cythonization (see # https://github.com/PyTables/PyTables/issues/122) #dh_auto_clean --buildsystem=pybuild /usr/bin/make distclean make[2]: Entering directory '/<>' rm -f -r MANIFEST build dist tmp tables/__pycache__ rm -f bench/*.h5 bench/*.prof rm -f -r examples/*.h5 examples/raw rm -f -r *.egg-info rm -f ANNOUNCE.txt tables/*.so a.out find . '(' -name '*.py[co]' -o -name '*~' ')' -exec rm '{}' ';' for srcdir in src doc ; do /usr/bin/make -C $srcdir PYTHONPATH=/<>/build/lib.linux-armv7l-3.7 clean ; done make[3]: Entering directory '/<>/src' rm -f version.h make[3]: Leaving directory '/<>/src' make[3]: Entering directory '/<>/doc' make[3]: Leaving directory '/<>/doc' /usr/bin/make -C src PYTHONPATH=/<>/build/lib.linux-armv7l-3.7 distclean make[3]: Entering directory '/<>/src' rm -f version.h make[3]: Leaving directory '/<>/src' rm -f tables/_comp_*.c tables/*extension.c rm -f doc/usersguide-*.pdf rm -f -r doc/html #git clean -fdx make[2]: Leaving directory '/<>' rm -f -r doc/*.pdf tables.egg-info tmp-locales rm -f -r .pybuild make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules build-arch dh build-arch --with python2,python3,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:217: python2.7 setup.py config /tmp/lzo_version_dateeApfr_.c: In function ‘main’: /tmp/lzo_version_dateeApfr_.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersionAFzRKT.c: In function ‘main’: /tmp/BZ2_bzlibVersionAFzRKT.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/tables/utilsextension.pxd tree = Parsing.p_module(s, pxd, full_module_name) * Using Python 2.7.17 (default, Oct 19 2019, 23:36:22) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. Compiling tables/utilsextension.pyx because it changed. [1/1] Cythonizing tables/utilsextension.pyx /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/tables/hdf5extension.pxd tree = Parsing.p_module(s, pxd, full_module_name) Compiling tables/hdf5extension.pyx because it changed. [1/1] Cythonizing tables/hdf5extension.pyx /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/tables/tableextension.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling tables/tableextension.pyx because it changed. [1/1] Cythonizing tables/tableextension.pyx /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/tables/linkextension.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling tables/linkextension.pyx because it changed. [1/1] Cythonizing tables/linkextension.pyx /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/tables/_comp_lzo.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling tables/_comp_lzo.pyx because it changed. [1/1] Cythonizing tables/_comp_lzo.pyx /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/tables/_comp_bzip2.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling tables/_comp_bzip2.pyx because it changed. [1/1] Cythonizing tables/_comp_bzip2.pyx /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/tables/lrucacheextension.pxd tree = Parsing.p_module(s, pxd, full_module_name) Compiling tables/lrucacheextension.pyx because it changed. [1/1] Cythonizing tables/lrucacheextension.pyx /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/tables/indexesextension.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling tables/indexesextension.pyx because it changed. [1/1] Cythonizing tables/indexesextension.pyx /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) running config I: pybuild base:217: python2.7-dbg setup.py config /tmp/lzo_version_datem2Q64J.c: In function ‘main’: /tmp/lzo_version_datem2Q64J.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersionDeULKQ.c: In function ‘main’: /tmp/BZ2_bzlibVersionDeULKQ.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) * Using Python 2.7.17 (default, Oct 19 2019, 23:36:22) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running config I: pybuild base:217: python3.8 setup.py config /tmp/lzo_version_datefk4qzpvs.c: In function ‘main’: /tmp/lzo_version_datefk4qzpvs.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersionlhh235k8.c: In function ‘main’: /tmp/BZ2_bzlibVersionlhh235k8.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ * Using Python 3.8.0 (default, Oct 20 2019, 16:00:25) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running config /usr/lib/python3.8/distutils/dist.py:274: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) I: pybuild base:217: python3.7 setup.py config /tmp/lzo_version_datew9y4tisa.c: In function ‘main’: /tmp/lzo_version_datew9y4tisa.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersionq06e16tx.c: In function ‘main’: /tmp/BZ2_bzlibVersionq06e16tx.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ * Using Python 3.7.5 (default, Oct 15 2019, 16:15:10) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running config /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) I: pybuild base:217: python3.8-dbg setup.py config /tmp/lzo_version_date_94tbyw9.c: In function ‘main’: /tmp/lzo_version_date_94tbyw9.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersionz1peg1ql.c: In function ‘main’: /tmp/BZ2_bzlibVersionz1peg1ql.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ * Using Python 3.8.0 (default, Oct 20 2019, 16:00:25) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running config setup.py:365: DeprecationWarning: invalid escape sequence \s major_version = int(re.split("\s+", line)[2]) setup.py:367: DeprecationWarning: invalid escape sequence \s minor_version = int(re.split("\s+", line)[2]) setup.py:369: DeprecationWarning: invalid escape sequence \s release_version = int(re.split("\s+", line)[2]) setup.py:387: DeprecationWarning: invalid escape sequence \s major_version = int(re.split("\s+", line)[2]) setup.py:389: DeprecationWarning: invalid escape sequence \s minor_version = int(re.split("\s+", line)[2]) setup.py:391: DeprecationWarning: invalid escape sequence \s release_version = int(re.split("\s+", line)[2]) /usr/lib/python3/dist-packages/setuptools/depends.py:2: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses import imp setup.py:394: ResourceWarning: unclosed file <_io.TextIOWrapper name='/usr/include/blosc.h' mode='r' encoding='UTF-8'> break ResourceWarning: Enable tracemalloc to get the object allocation traceback /usr/lib/python3.8/distutils/dist.py:274: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) I: pybuild base:217: python3.7-dbg setup.py config /tmp/lzo_version_datejk5ua_gh.c: In function ‘main’: /tmp/lzo_version_datejk5ua_gh.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersiono6ie6v3t.c: In function ‘main’: /tmp/BZ2_bzlibVersiono6ie6v3t.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ * Using Python 3.7.5 (default, Oct 15 2019, 16:15:10) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running config setup.py:365: DeprecationWarning: invalid escape sequence \s major_version = int(re.split("\s+", line)[2]) setup.py:367: DeprecationWarning: invalid escape sequence \s minor_version = int(re.split("\s+", line)[2]) setup.py:369: DeprecationWarning: invalid escape sequence \s release_version = int(re.split("\s+", line)[2]) setup.py:387: DeprecationWarning: invalid escape sequence \s major_version = int(re.split("\s+", line)[2]) setup.py:389: DeprecationWarning: invalid escape sequence \s minor_version = int(re.split("\s+", line)[2]) setup.py:391: DeprecationWarning: invalid escape sequence \s release_version = int(re.split("\s+", line)[2]) /usr/lib/python3/dist-packages/setuptools/depends.py:2: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses import imp setup.py:394: ResourceWarning: unclosed file <_io.TextIOWrapper name='/usr/include/blosc.h' mode='r' encoding='UTF-8'> break ResourceWarning: Enable tracemalloc to get the object allocation traceback /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) debian/rules override_dh_auto_build make[1]: Entering directory '/<>' /usr/bin/make ANNOUNCE.txt make[2]: Entering directory '/<>' cat "ANNOUNCE.txt.in" | sed -e 's/@VERSION@/3.5.2/g' > "ANNOUNCE.txt" make[2]: Leaving directory '/<>' /usr/bin/make -C src all make[2]: Entering directory '/<>/src' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/src' dh_auto_build --buildsystem=pybuild I: pybuild base:217: /usr/bin/python2 setup.py build /tmp/lzo_version_dateINcyaY.c: In function ‘main’: /tmp/lzo_version_dateINcyaY.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersione44ZYW.c: In function ‘main’: /tmp/BZ2_bzlibVersione44ZYW.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) * Using Python 2.7.17 (default, Oct 19 2019, 23:36:22) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running build running build_py creating /<>/.pybuild/cpython2_2.7/build/tables copying tables/group.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/exceptions.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/array.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/filters.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/leaf.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/vlarray.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/parameters.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/attributeset.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/table.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/conditions.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/__init__.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/expression.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/link.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/unimplemented.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/file.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/earray.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/indexes.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/undoredo.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/registry.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/atom.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/idxutils.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/carray.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/utils.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/flavor.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/req_versions.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/index.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/node.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/description.py -> /<>/.pybuild/cpython2_2.7/build/tables copying tables/path.py -> /<>/.pybuild/cpython2_2.7/build/tables creating /<>/.pybuild/cpython2_2.7/build/tables/scripts copying tables/scripts/ptrepack.py -> /<>/.pybuild/cpython2_2.7/build/tables/scripts copying tables/scripts/ptdump.py -> /<>/.pybuild/cpython2_2.7/build/tables/scripts copying tables/scripts/__init__.py -> /<>/.pybuild/cpython2_2.7/build/tables/scripts copying tables/scripts/pt2to3.py -> /<>/.pybuild/cpython2_2.7/build/tables/scripts copying tables/scripts/pttree.py -> /<>/.pybuild/cpython2_2.7/build/tables/scripts creating /<>/.pybuild/cpython2_2.7/build/tables/misc copying tables/misc/enum.py -> /<>/.pybuild/cpython2_2.7/build/tables/misc copying tables/misc/proxydict.py -> /<>/.pybuild/cpython2_2.7/build/tables/misc copying tables/misc/__init__.py -> /<>/.pybuild/cpython2_2.7/build/tables/misc creating /<>/.pybuild/cpython2_2.7/build/tables/nodes copying tables/nodes/filenode.py -> /<>/.pybuild/cpython2_2.7/build/tables/nodes copying tables/nodes/__init__.py -> /<>/.pybuild/cpython2_2.7/build/tables/nodes creating /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_array.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_index_backcompat.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_aux.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_tree.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/check_leaks.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_nestedtypes.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_numpy.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_timetype.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_links.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_all.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_garbage.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_timestamps.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_hdf5compat.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/create_backcompat_indexes.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_tables.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_create.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_earray.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/__init__.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/common.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_basics.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_lists.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_types.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_attributes.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_expression.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_indexes.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_do_undo.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_tablesMD.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_indexvalues.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_backcompat.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_carray.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_vlarray.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_queries.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_utils.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_enum.py -> /<>/.pybuild/cpython2_2.7/build/tables/tests creating /<>/.pybuild/cpython2_2.7/build/tables/nodes/tests copying tables/nodes/tests/__init__.py -> /<>/.pybuild/cpython2_2.7/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.py -> /<>/.pybuild/cpython2_2.7/build/tables/nodes/tests copying tables/tests/blosc_bigendian.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/smpl_f64le.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/ex-noattr.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/python3.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/zerodim-attrs-1.3.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/flavored_vlarrays-format1.6.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/Tables_lzo1.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/Table2_1_lzo_nrv2e_shuffle.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/smpl_SDSextendible.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/attr-u16.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/smpl_f64be.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/elink2.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/smpl_i32be.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/smpl_i32le.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/smpl_i64le.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/issue_368.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/float.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/vlstr_attr.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/non-chunked-table.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/oldflavor_numeric.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/smpl_unsupptype.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/nested-type-with-gaps.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/indexes_2_0.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_szip.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/smpl_compound_chunked.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/indexes_2_1.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/Tables_lzo2.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/smpl_i64be.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/Tables_lzo1_shuffle.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/times-nested-be.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/bug-idx.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/idx-std-1.x.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/array_mdatom.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/issue_560.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/smpl_enum.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/elink.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/Tables_lzo2_shuffle.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/python2.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/slink.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/time-table-vlarray-1_x.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/zerodim-attrs-1.4.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/scalar.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/vlunicode_endian.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_ref_array2.mat -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/matlab_file.mat -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/tests/test_ref_array1.mat -> /<>/.pybuild/cpython2_2.7/build/tables/tests copying tables/nodes/tests/test_filenode.dat -> /<>/.pybuild/cpython2_2.7/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.xbm -> /<>/.pybuild/cpython2_2.7/build/tables/nodes/tests copying tables/nodes/tests/test_filenode_v1.h5 -> /<>/.pybuild/cpython2_2.7/build/tables/nodes/tests running build_ext building 'tables.utilsextension' extension creating build creating build/temp.linux-armhf-2.7 creating build/temp.linux-armhf-2.7/tables creating build/temp.linux-armhf-2.7/src creating build/temp.linux-armhf-2.7/hdf5-blosc creating build/temp.linux-armhf-2.7/hdf5-blosc/src arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c tables/utilsextension.c -o build/temp.linux-armhf-2.7/tables/utilsextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/utilsextension.c:612: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_34blosc_compressor_list’: tables/utilsextension.c:7155:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 7155 | __pyx_t_1 = blosc_list_compressors(); | ^ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_36blosc_compcode_to_compname_’: tables/utilsextension.c:7329:56: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 7329 | __pyx_t_2 = ((blosc_compcode_to_compname(__pyx_t_1, (&__pyx_v_cname)) >= 0) != 0); | ~^~~~~~~~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from tables/utilsextension.c:619: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/utils.c -o build/temp.linux-armhf-2.7/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ARRAY.c -o build/temp.linux-armhf-2.7/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ATTR.c -o build/temp.linux-armhf-2.7/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-2.7/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7/tables/utilsextension.o build/temp.linux-armhf-2.7/src/utils.o build/temp.linux-armhf-2.7/src/H5ARRAY.o build/temp.linux-armhf-2.7/src/H5ATTR.o build/temp.linux-armhf-2.7/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython2_2.7/build/tables/utilsextension.so building 'tables.hdf5extension' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c tables/hdf5extension.c -o build/temp.linux-armhf-2.7/tables/hdf5extension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/hdf5extension.c:611: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/utils.c -o build/temp.linux-armhf-2.7/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/typeconv.c -o build/temp.linux-armhf-2.7/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ARRAY.c -o build/temp.linux-armhf-2.7/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-2.7/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5VLARRAY.c -o build/temp.linux-armhf-2.7/src/H5VLARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ATTR.c -o build/temp.linux-armhf-2.7/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-2.7/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7/tables/hdf5extension.o build/temp.linux-armhf-2.7/src/utils.o build/temp.linux-armhf-2.7/src/typeconv.o build/temp.linux-armhf-2.7/src/H5ARRAY.o build/temp.linux-armhf-2.7/src/H5ARRAY-opt.o build/temp.linux-armhf-2.7/src/H5VLARRAY.o build/temp.linux-armhf-2.7/src/H5ATTR.o build/temp.linux-armhf-2.7/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython2_2.7/build/tables/hdf5extension.so building 'tables.tableextension' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c tables/tableextension.c -o build/temp.linux-armhf-2.7/tables/tableextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/tableextension.c:612: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/utils.c -o build/temp.linux-armhf-2.7/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/typeconv.c -o build/temp.linux-armhf-2.7/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5TB-opt.c -o build/temp.linux-armhf-2.7/src/H5TB-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ATTR.c -o build/temp.linux-armhf-2.7/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-2.7/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7/tables/tableextension.o build/temp.linux-armhf-2.7/src/utils.o build/temp.linux-armhf-2.7/src/typeconv.o build/temp.linux-armhf-2.7/src/H5TB-opt.o build/temp.linux-armhf-2.7/src/H5ATTR.o build/temp.linux-armhf-2.7/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython2_2.7/build/tables/tableextension.so building 'tables._comp_lzo' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c tables/_comp_lzo.c -o build/temp.linux-armhf-2.7/tables/_comp_lzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5Zlzo.c -o build/temp.linux-armhf-2.7/src/H5Zlzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7/tables/_comp_lzo.o build/temp.linux-armhf-2.7/src/H5Zlzo.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -llzo2 -o /<>/.pybuild/cpython2_2.7/build/tables/_comp_lzo.so building 'tables._comp_bzip2' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c tables/_comp_bzip2.c -o build/temp.linux-armhf-2.7/tables/_comp_bzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5Zbzip2.c -o build/temp.linux-armhf-2.7/src/H5Zbzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7/tables/_comp_bzip2.o build/temp.linux-armhf-2.7/src/H5Zbzip2.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lbz2 -o /<>/.pybuild/cpython2_2.7/build/tables/_comp_bzip2.so building 'tables.linkextension' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c tables/linkextension.c -o build/temp.linux-armhf-2.7/tables/linkextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/linkextension.c:611: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7/tables/linkextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython2_2.7/build/tables/linkextension.so building 'tables.lrucacheextension' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c tables/lrucacheextension.c -o build/temp.linux-armhf-2.7/tables/lrucacheextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/lrucacheextension.c:611: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7/tables/lrucacheextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -o /<>/.pybuild/cpython2_2.7/build/tables/lrucacheextension.so building 'tables.indexesextension' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c tables/indexesextension.c -o build/temp.linux-armhf-2.7/tables/indexesextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/indexesextension.c:611: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-2.7/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/idx-opt.c -o build/temp.linux-armhf-2.7/src/idx-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7/tables/indexesextension.o build/temp.linux-armhf-2.7/src/H5ARRAY-opt.o build/temp.linux-armhf-2.7/src/idx-opt.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython2_2.7/build/tables/indexesextension.so I: pybuild base:217: /usr/bin/python2-dbg setup.py build /tmp/lzo_version_dateh_O2S6.c: In function ‘main’: /tmp/lzo_version_dateh_O2S6.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersionwRV8Zv.c: In function ‘main’: /tmp/BZ2_bzlibVersionwRV8Zv.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) * Using Python 2.7.17 (default, Oct 19 2019, 23:36:22) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running build running build_py creating /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/group.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/exceptions.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/array.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/filters.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/leaf.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/vlarray.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/parameters.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/attributeset.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/table.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/conditions.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/__init__.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/expression.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/link.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/unimplemented.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/file.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/earray.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/indexes.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/undoredo.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/registry.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/atom.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/idxutils.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/carray.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/utils.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/flavor.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/req_versions.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/index.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/node.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/description.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables copying tables/path.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables creating /<>/.pybuild/cpython2_2.7_dbg/build/tables/scripts copying tables/scripts/ptrepack.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/scripts copying tables/scripts/ptdump.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/scripts copying tables/scripts/__init__.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/scripts copying tables/scripts/pt2to3.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/scripts copying tables/scripts/pttree.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/scripts creating /<>/.pybuild/cpython2_2.7_dbg/build/tables/misc copying tables/misc/enum.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/misc copying tables/misc/proxydict.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/misc copying tables/misc/__init__.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/misc creating /<>/.pybuild/cpython2_2.7_dbg/build/tables/nodes copying tables/nodes/filenode.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/nodes copying tables/nodes/__init__.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/nodes creating /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_array.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_index_backcompat.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_aux.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_tree.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/check_leaks.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_nestedtypes.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_numpy.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_timetype.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_links.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_all.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_garbage.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_timestamps.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_hdf5compat.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/create_backcompat_indexes.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_tables.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_create.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_earray.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/__init__.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/common.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_basics.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_lists.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_types.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_attributes.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_expression.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_indexes.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_do_undo.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_tablesMD.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_indexvalues.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_backcompat.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_carray.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_vlarray.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_queries.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_utils.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_enum.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests creating /<>/.pybuild/cpython2_2.7_dbg/build/tables/nodes/tests copying tables/nodes/tests/__init__.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.py -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/nodes/tests copying tables/tests/blosc_bigendian.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/smpl_f64le.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/ex-noattr.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/python3.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/zerodim-attrs-1.3.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/flavored_vlarrays-format1.6.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/Tables_lzo1.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/Table2_1_lzo_nrv2e_shuffle.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/smpl_SDSextendible.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/attr-u16.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/smpl_f64be.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/elink2.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/smpl_i32be.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/smpl_i32le.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/smpl_i64le.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/issue_368.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/float.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/vlstr_attr.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/non-chunked-table.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/oldflavor_numeric.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/smpl_unsupptype.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/nested-type-with-gaps.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/indexes_2_0.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_szip.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/smpl_compound_chunked.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/indexes_2_1.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/Tables_lzo2.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/smpl_i64be.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/Tables_lzo1_shuffle.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/times-nested-be.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/bug-idx.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/idx-std-1.x.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/array_mdatom.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/issue_560.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/smpl_enum.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/elink.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/Tables_lzo2_shuffle.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/python2.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/slink.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/time-table-vlarray-1_x.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/zerodim-attrs-1.4.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/scalar.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/vlunicode_endian.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_ref_array2.mat -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/matlab_file.mat -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/tests/test_ref_array1.mat -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/tests copying tables/nodes/tests/test_filenode.dat -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.xbm -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/nodes/tests copying tables/nodes/tests/test_filenode_v1.h5 -> /<>/.pybuild/cpython2_2.7_dbg/build/tables/nodes/tests running build_ext building 'tables.utilsextension' extension creating build/temp.linux-armhf-2.7-pydebug creating build/temp.linux-armhf-2.7-pydebug/tables creating build/temp.linux-armhf-2.7-pydebug/src creating build/temp.linux-armhf-2.7-pydebug/hdf5-blosc creating build/temp.linux-armhf-2.7-pydebug/hdf5-blosc/src arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c tables/utilsextension.c -o build/temp.linux-armhf-2.7-pydebug/tables/utilsextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/utilsextension.c:612: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_34blosc_compressor_list’: tables/utilsextension.c:7155:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 7155 | __pyx_t_1 = blosc_list_compressors(); | ^ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_36blosc_compcode_to_compname_’: tables/utilsextension.c:7329:56: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 7329 | __pyx_t_2 = ((blosc_compcode_to_compname(__pyx_t_1, (&__pyx_v_cname)) >= 0) != 0); | ~^~~~~~~~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from tables/utilsextension.c:619: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/utils.c -o build/temp.linux-armhf-2.7-pydebug/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/H5ARRAY.c -o build/temp.linux-armhf-2.7-pydebug/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/H5ATTR.c -o build/temp.linux-armhf-2.7-pydebug/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-2.7-pydebug/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -g -O0 -Wall -Wstrict-prototypes -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7-pydebug/tables/utilsextension.o build/temp.linux-armhf-2.7-pydebug/src/utils.o build/temp.linux-armhf-2.7-pydebug/src/H5ARRAY.o build/temp.linux-armhf-2.7-pydebug/src/H5ATTR.o build/temp.linux-armhf-2.7-pydebug/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython2_2.7_dbg/build/tables/utilsextension_d.so building 'tables.hdf5extension' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c tables/hdf5extension.c -o build/temp.linux-armhf-2.7-pydebug/tables/hdf5extension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/hdf5extension.c:611: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/utils.c -o build/temp.linux-armhf-2.7-pydebug/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/typeconv.c -o build/temp.linux-armhf-2.7-pydebug/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/H5ARRAY.c -o build/temp.linux-armhf-2.7-pydebug/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-2.7-pydebug/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/H5VLARRAY.c -o build/temp.linux-armhf-2.7-pydebug/src/H5VLARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/H5ATTR.c -o build/temp.linux-armhf-2.7-pydebug/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-2.7-pydebug/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -g -O0 -Wall -Wstrict-prototypes -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7-pydebug/tables/hdf5extension.o build/temp.linux-armhf-2.7-pydebug/src/utils.o build/temp.linux-armhf-2.7-pydebug/src/typeconv.o build/temp.linux-armhf-2.7-pydebug/src/H5ARRAY.o build/temp.linux-armhf-2.7-pydebug/src/H5ARRAY-opt.o build/temp.linux-armhf-2.7-pydebug/src/H5VLARRAY.o build/temp.linux-armhf-2.7-pydebug/src/H5ATTR.o build/temp.linux-armhf-2.7-pydebug/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython2_2.7_dbg/build/tables/hdf5extension_d.so building 'tables.tableextension' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c tables/tableextension.c -o build/temp.linux-armhf-2.7-pydebug/tables/tableextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/tableextension.c:612: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/utils.c -o build/temp.linux-armhf-2.7-pydebug/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/typeconv.c -o build/temp.linux-armhf-2.7-pydebug/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/H5TB-opt.c -o build/temp.linux-armhf-2.7-pydebug/src/H5TB-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/H5ATTR.c -o build/temp.linux-armhf-2.7-pydebug/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-2.7-pydebug/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -g -O0 -Wall -Wstrict-prototypes -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7-pydebug/tables/tableextension.o build/temp.linux-armhf-2.7-pydebug/src/utils.o build/temp.linux-armhf-2.7-pydebug/src/typeconv.o build/temp.linux-armhf-2.7-pydebug/src/H5TB-opt.o build/temp.linux-armhf-2.7-pydebug/src/H5ATTR.o build/temp.linux-armhf-2.7-pydebug/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython2_2.7_dbg/build/tables/tableextension_d.so building 'tables._comp_lzo' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c tables/_comp_lzo.c -o build/temp.linux-armhf-2.7-pydebug/tables/_comp_lzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/H5Zlzo.c -o build/temp.linux-armhf-2.7-pydebug/src/H5Zlzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -g -O0 -Wall -Wstrict-prototypes -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7-pydebug/tables/_comp_lzo.o build/temp.linux-armhf-2.7-pydebug/src/H5Zlzo.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -llzo2 -o /<>/.pybuild/cpython2_2.7_dbg/build/tables/_comp_lzo_d.so building 'tables._comp_bzip2' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c tables/_comp_bzip2.c -o build/temp.linux-armhf-2.7-pydebug/tables/_comp_bzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/H5Zbzip2.c -o build/temp.linux-armhf-2.7-pydebug/src/H5Zbzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -g -O0 -Wall -Wstrict-prototypes -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7-pydebug/tables/_comp_bzip2.o build/temp.linux-armhf-2.7-pydebug/src/H5Zbzip2.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lbz2 -o /<>/.pybuild/cpython2_2.7_dbg/build/tables/_comp_bzip2_d.so building 'tables.linkextension' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c tables/linkextension.c -o build/temp.linux-armhf-2.7-pydebug/tables/linkextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/linkextension.c:611: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -g -O0 -Wall -Wstrict-prototypes -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7-pydebug/tables/linkextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython2_2.7_dbg/build/tables/linkextension_d.so building 'tables.lrucacheextension' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c tables/lrucacheextension.c -o build/temp.linux-armhf-2.7-pydebug/tables/lrucacheextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/lrucacheextension.c:611: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -g -O0 -Wall -Wstrict-prototypes -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7-pydebug/tables/lrucacheextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -o /<>/.pybuild/cpython2_2.7_dbg/build/tables/lrucacheextension_d.so building 'tables.indexesextension' extension arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c tables/indexesextension.c -o build/temp.linux-armhf-2.7-pydebug/tables/indexesextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/indexesextension.c:611: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-2.7-pydebug/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7_d -c src/idx-opt.c -o build/temp.linux-armhf-2.7-pydebug/src/idx-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -g -O0 -Wall -Wstrict-prototypes -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wdate-time -g -O0 -fdebug-prefix-map=/build/python2.7-i9QlNx/python2.7-2.7.17=. -fstack-protector -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC build/temp.linux-armhf-2.7-pydebug/tables/indexesextension.o build/temp.linux-armhf-2.7-pydebug/src/H5ARRAY-opt.o build/temp.linux-armhf-2.7-pydebug/src/idx-opt.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython2_2.7_dbg/build/tables/indexesextension_d.so I: pybuild base:217: /usr/bin/python3.8 setup.py build /tmp/lzo_version_dateyf68x9ve.c: In function ‘main’: /tmp/lzo_version_dateyf68x9ve.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersionq2bo7h3p.c: In function ‘main’: /tmp/BZ2_bzlibVersionq2bo7h3p.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ * Using Python 3.8.0 (default, Oct 20 2019, 16:00:25) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running build running build_py creating /<>/.pybuild/cpython3_3.8/build/tables copying tables/group.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/exceptions.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/array.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/filters.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/leaf.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/vlarray.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/parameters.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/attributeset.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/table.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/conditions.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/__init__.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/expression.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/link.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/unimplemented.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/file.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/earray.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/indexes.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/undoredo.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/registry.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/atom.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/idxutils.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/carray.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/utils.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/flavor.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/req_versions.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/index.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/node.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/description.py -> /<>/.pybuild/cpython3_3.8/build/tables copying tables/path.py -> /<>/.pybuild/cpython3_3.8/build/tables creating /<>/.pybuild/cpython3_3.8/build/tables/scripts copying tables/scripts/ptrepack.py -> /<>/.pybuild/cpython3_3.8/build/tables/scripts copying tables/scripts/ptdump.py -> /<>/.pybuild/cpython3_3.8/build/tables/scripts copying tables/scripts/__init__.py -> /<>/.pybuild/cpython3_3.8/build/tables/scripts copying tables/scripts/pt2to3.py -> /<>/.pybuild/cpython3_3.8/build/tables/scripts copying tables/scripts/pttree.py -> /<>/.pybuild/cpython3_3.8/build/tables/scripts creating /<>/.pybuild/cpython3_3.8/build/tables/misc copying tables/misc/enum.py -> /<>/.pybuild/cpython3_3.8/build/tables/misc copying tables/misc/proxydict.py -> /<>/.pybuild/cpython3_3.8/build/tables/misc copying tables/misc/__init__.py -> /<>/.pybuild/cpython3_3.8/build/tables/misc creating /<>/.pybuild/cpython3_3.8/build/tables/nodes copying tables/nodes/filenode.py -> /<>/.pybuild/cpython3_3.8/build/tables/nodes copying tables/nodes/__init__.py -> /<>/.pybuild/cpython3_3.8/build/tables/nodes creating /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_array.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_index_backcompat.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_aux.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_tree.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/check_leaks.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_nestedtypes.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_numpy.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_timetype.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_links.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_all.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_garbage.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_timestamps.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_hdf5compat.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/create_backcompat_indexes.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_tables.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_create.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_earray.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/__init__.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/common.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_basics.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_lists.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_types.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_attributes.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_expression.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_indexes.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_do_undo.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_tablesMD.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_indexvalues.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_backcompat.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_carray.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_vlarray.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_queries.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_utils.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_enum.py -> /<>/.pybuild/cpython3_3.8/build/tables/tests creating /<>/.pybuild/cpython3_3.8/build/tables/nodes/tests copying tables/nodes/tests/__init__.py -> /<>/.pybuild/cpython3_3.8/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.py -> /<>/.pybuild/cpython3_3.8/build/tables/nodes/tests copying tables/tests/blosc_bigendian.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/smpl_f64le.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/ex-noattr.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/python3.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/zerodim-attrs-1.3.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/flavored_vlarrays-format1.6.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/Tables_lzo1.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/Table2_1_lzo_nrv2e_shuffle.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/smpl_SDSextendible.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/attr-u16.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/smpl_f64be.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/elink2.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/smpl_i32be.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/smpl_i32le.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/smpl_i64le.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/issue_368.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/float.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/vlstr_attr.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/non-chunked-table.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/oldflavor_numeric.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/smpl_unsupptype.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/nested-type-with-gaps.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/indexes_2_0.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_szip.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/smpl_compound_chunked.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/indexes_2_1.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/Tables_lzo2.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/smpl_i64be.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/Tables_lzo1_shuffle.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/times-nested-be.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/bug-idx.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/idx-std-1.x.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/array_mdatom.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/issue_560.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/smpl_enum.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/elink.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/Tables_lzo2_shuffle.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/python2.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/slink.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/time-table-vlarray-1_x.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/zerodim-attrs-1.4.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/scalar.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/vlunicode_endian.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_ref_array2.mat -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/matlab_file.mat -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/tests/test_ref_array1.mat -> /<>/.pybuild/cpython3_3.8/build/tables/tests copying tables/nodes/tests/test_filenode.dat -> /<>/.pybuild/cpython3_3.8/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.xbm -> /<>/.pybuild/cpython3_3.8/build/tables/nodes/tests copying tables/nodes/tests/test_filenode_v1.h5 -> /<>/.pybuild/cpython3_3.8/build/tables/nodes/tests running build_ext building 'tables.utilsextension' extension creating build/temp.linux-armhf-3.8 creating build/temp.linux-armhf-3.8/tables creating build/temp.linux-armhf-3.8/src creating build/temp.linux-armhf-3.8/hdf5-blosc creating build/temp.linux-armhf-3.8/hdf5-blosc/src arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c tables/utilsextension.c -o build/temp.linux-armhf-3.8/tables/utilsextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/utilsextension.c:612: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_34blosc_compressor_list’: tables/utilsextension.c:7155:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 7155 | __pyx_t_1 = blosc_list_compressors(); | ^ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_36blosc_compcode_to_compname_’: tables/utilsextension.c:7329:56: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 7329 | __pyx_t_2 = ((blosc_compcode_to_compname(__pyx_t_1, (&__pyx_v_cname)) >= 0) != 0); | ~^~~~~~~~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from tables/utilsextension.c:619: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_40which_class’: tables/utilsextension.c:8140:52: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 8140 | __pyx_t_2 = (((__pyx_v_maxdims[__pyx_v_i]) == -1LL) != 0); | ^~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_58hdf5_to_np_nested_type’: tables/utilsextension.c:12423:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12423 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ^ tables/utilsextension.c: In function ‘__pyx_f_6tables_14utilsextension_load_reference’: tables/utilsextension.c:15222:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 15222 | for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { | ^ tables/utilsextension.c:15449:52: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 15449 | __pyx_t_3 = (((__pyx_v_maxdims[__pyx_v_j]) == -1LL) != 0); | ^~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/utils.c -o build/temp.linux-armhf-3.8/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/H5ARRAY.c -o build/temp.linux-armhf-3.8/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/H5ATTR.c -o build/temp.linux-armhf-3.8/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.8/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/tables/utilsextension.o build/temp.linux-armhf-3.8/src/utils.o build/temp.linux-armhf-3.8/src/H5ARRAY.o build/temp.linux-armhf-3.8/src/H5ATTR.o build/temp.linux-armhf-3.8/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.8/build/tables/utilsextension.cpython-38-arm-linux-gnueabihf.so building 'tables.hdf5extension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c tables/hdf5extension.c -o build/temp.linux-armhf-3.8/tables/hdf5extension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/hdf5extension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/hdf5extension.c: In function ‘__pyx_pf_6tables_13hdf5extension_5Array_4_open_array’: tables/hdf5extension.c:18511:54: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 18511 | __pyx_t_5 = (((__pyx_v_self->maxdims[__pyx_v_i]) == -1LL) != 0); | ^~ tables/hdf5extension.c: In function ‘__pyx_pf_6tables_13hdf5extension_7VLArray_10_read_array’: tables/hdf5extension.c:26272:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 26272 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_5; __pyx_v_i++) { | ^ tables/hdf5extension.c: In function ‘__Pyx_PyInt_As_hbool_t’: tables/hdf5extension.c:38142:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38142 | return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/hdf5extension.c:38160:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38160 | return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/hdf5extension.c:38178:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38178 | return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/utils.c -o build/temp.linux-armhf-3.8/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/typeconv.c -o build/temp.linux-armhf-3.8/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/H5ARRAY.c -o build/temp.linux-armhf-3.8/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-3.8/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/H5VLARRAY.c -o build/temp.linux-armhf-3.8/src/H5VLARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/H5ATTR.c -o build/temp.linux-armhf-3.8/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.8/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/tables/hdf5extension.o build/temp.linux-armhf-3.8/src/utils.o build/temp.linux-armhf-3.8/src/typeconv.o build/temp.linux-armhf-3.8/src/H5ARRAY.o build/temp.linux-armhf-3.8/src/H5ARRAY-opt.o build/temp.linux-armhf-3.8/src/H5VLARRAY.o build/temp.linux-armhf-3.8/src/H5ATTR.o build/temp.linux-armhf-3.8/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.8/build/tables/hdf5extension.cpython-38-arm-linux-gnueabihf.so building 'tables.tableextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c tables/tableextension.c -o build/temp.linux-armhf-3.8/tables/tableextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/tableextension.c:612: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_5Table_get_nested_type’: tables/tableextension.c:4685:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 4685 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row__init_loop’: tables/tableextension.c:11680:37: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 11680 | __pyx_t_2 = (__pyx_v_self->stop < __pyx_v_self->nrows); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__indexed’: tables/tableextension.c:12102:45: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12102 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:12332:47: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 12332 | __pyx_t_1 = ((__pyx_v_self->nrowsread > __pyx_v_self->stop) != 0); | ^ tables/tableextension.c:12370:33: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12370 | __pyx_t_1 = ((__pyx_v_j == __pyx_v_self->nchunksinbuf) != 0); | ^~ tables/tableextension.c:12662:58: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 12662 | __pyx_t_1 = (((__pyx_v_self->lenbuf + __pyx_t_8) < __pyx_v_self->iterseq_max_elements) != 0); | ^ tables/tableextension.c:12760:38: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12760 | __pyx_t_1 = ((__pyx_v_self->_row == __pyx_v_self->lenbuf) != 0); | ^~ tables/tableextension.c:12826:42: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12826 | __pyx_t_11 = ((__pyx_v_self->_nrow < __pyx_v_self->start) != 0); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__coords’: tables/tableextension.c:13057:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13057 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:13067:76: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 13067 | __pyx_t_1 = (((__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf) > __pyx_v_self->stop) != 0); | ^ tables/tableextension.c:13412:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘long long unsigned int’ [-Wsign-compare] 13412 | __pyx_t_1 = ((__pyx_v_self->nextelement < ((__pyx_v_self->start - ((PY_LONG_LONG)__pyx_v_self->nrowsread)) + 1)) != 0); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__inkernel’: tables/tableextension.c:13763:45: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13763 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:13774:49: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13774 | __pyx_t_1 = ((__pyx_v_self->nextelement >= (__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf)) != 0); | ^~ tables/tableextension.c:13803:41: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13803 | __pyx_t_1 = ((__pyx_v_self->stopb > __pyx_v_self->nrowsinbuf) != 0); | ^ tables/tableextension.c:14065:43: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14065 | __pyx_t_10 = ((__pyx_v_self->step >= __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__general’: tables/tableextension.c:14366:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14366 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:14377:51: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14377 | __pyx_t_1 = ((__pyx_v_self->nextelement >= (__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf)) != 0); | ^~ tables/tableextension.c:14406:43: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14406 | __pyx_t_1 = ((__pyx_v_self->stopb > __pyx_v_self->nrowsinbuf) != 0); | ^ tables/tableextension.c:14677:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14677 | __pyx_t_1 = ((__pyx_v_self->nextelement < ((__pyx_v_self->start - __pyx_v_self->nrowsread) + 1)) != 0); | ^ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_8_fill_col’: tables/tableextension.c:15434:36: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 15434 | __pyx_t_7 = ((__pyx_v_istopb > __pyx_v_inrowsinbuf) != 0); | ^ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_10append’: tables/tableextension.c:16452:46: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 16452 | __pyx_t_1 = ((__pyx_v_self->_unsaved_nrows == __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_16update’: tables/tableextension.c:16967:42: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 16967 | __pyx_t_3 = ((__pyx_v_self->_mod_nrows == __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__Pyx_PyInt_As_hbool_t’: tables/tableextension.c:26737:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26737 | return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/tableextension.c:26755:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26755 | return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/tableextension.c:26773:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26773 | return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/utils.c -o build/temp.linux-armhf-3.8/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/typeconv.c -o build/temp.linux-armhf-3.8/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/H5TB-opt.c -o build/temp.linux-armhf-3.8/src/H5TB-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/H5ATTR.c -o build/temp.linux-armhf-3.8/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.8/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/tables/tableextension.o build/temp.linux-armhf-3.8/src/utils.o build/temp.linux-armhf-3.8/src/typeconv.o build/temp.linux-armhf-3.8/src/H5TB-opt.o build/temp.linux-armhf-3.8/src/H5ATTR.o build/temp.linux-armhf-3.8/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.8/build/tables/tableextension.cpython-38-arm-linux-gnueabihf.so building 'tables._comp_lzo' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c tables/_comp_lzo.c -o build/temp.linux-armhf-3.8/tables/_comp_lzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/H5Zlzo.c -o build/temp.linux-armhf-3.8/src/H5Zlzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/tables/_comp_lzo.o build/temp.linux-armhf-3.8/src/H5Zlzo.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -llzo2 -o /<>/.pybuild/cpython3_3.8/build/tables/_comp_lzo.cpython-38-arm-linux-gnueabihf.so building 'tables._comp_bzip2' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c tables/_comp_bzip2.c -o build/temp.linux-armhf-3.8/tables/_comp_bzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/H5Zbzip2.c -o build/temp.linux-armhf-3.8/src/H5Zbzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/tables/_comp_bzip2.o build/temp.linux-armhf-3.8/src/H5Zbzip2.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lbz2 -o /<>/.pybuild/cpython3_3.8/build/tables/_comp_bzip2.cpython-38-arm-linux-gnueabihf.so building 'tables.linkextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c tables/linkextension.c -o build/temp.linux-armhf-3.8/tables/linkextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/linkextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/tables/linkextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.8/build/tables/linkextension.cpython-38-arm-linux-gnueabihf.so building 'tables.lrucacheextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c tables/lrucacheextension.c -o build/temp.linux-armhf-3.8/tables/lrucacheextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/lrucacheextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/tables/lrucacheextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -o /<>/.pybuild/cpython3_3.8/build/tables/lrucacheextension.cpython-38-arm-linux-gnueabihf.so building 'tables.indexesextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c tables/indexesextension.c -o build/temp.linux-armhf-3.8/tables/indexesextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/indexesextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/indexesextension.c: In function ‘__pyx_f_6tables_16indexesextension__keysort_string’: tables/indexesextension.c:14109:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 14109 | __pyx_t_1 = (((__pyx_v_pr - __pyx_v_pl) > (15 * __pyx_v_ss)) != 0); | ^ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-3.8/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/idx-opt.c -o build/temp.linux-armhf-3.8/src/idx-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/tables/indexesextension.o build/temp.linux-armhf-3.8/src/H5ARRAY-opt.o build/temp.linux-armhf-3.8/src/idx-opt.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.8/build/tables/indexesextension.cpython-38-arm-linux-gnueabihf.so /usr/lib/python3.8/distutils/dist.py:274: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) I: pybuild base:217: /usr/bin/python3 setup.py build /tmp/lzo_version_date73m3crp_.c: In function ‘main’: /tmp/lzo_version_date73m3crp_.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersionk9kk5fb4.c: In function ‘main’: /tmp/BZ2_bzlibVersionk9kk5fb4.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ * Using Python 3.7.5 (default, Oct 15 2019, 16:15:10) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running build running build_py creating /<>/.pybuild/cpython3_3.7/build/tables copying tables/group.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/exceptions.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/array.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/filters.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/leaf.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/vlarray.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/parameters.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/attributeset.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/table.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/conditions.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/__init__.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/expression.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/link.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/unimplemented.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/file.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/earray.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/indexes.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/undoredo.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/registry.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/atom.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/idxutils.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/carray.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/utils.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/flavor.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/req_versions.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/index.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/node.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/description.py -> /<>/.pybuild/cpython3_3.7/build/tables copying tables/path.py -> /<>/.pybuild/cpython3_3.7/build/tables creating /<>/.pybuild/cpython3_3.7/build/tables/scripts copying tables/scripts/ptrepack.py -> /<>/.pybuild/cpython3_3.7/build/tables/scripts copying tables/scripts/ptdump.py -> /<>/.pybuild/cpython3_3.7/build/tables/scripts copying tables/scripts/__init__.py -> /<>/.pybuild/cpython3_3.7/build/tables/scripts copying tables/scripts/pt2to3.py -> /<>/.pybuild/cpython3_3.7/build/tables/scripts copying tables/scripts/pttree.py -> /<>/.pybuild/cpython3_3.7/build/tables/scripts creating /<>/.pybuild/cpython3_3.7/build/tables/misc copying tables/misc/enum.py -> /<>/.pybuild/cpython3_3.7/build/tables/misc copying tables/misc/proxydict.py -> /<>/.pybuild/cpython3_3.7/build/tables/misc copying tables/misc/__init__.py -> /<>/.pybuild/cpython3_3.7/build/tables/misc creating /<>/.pybuild/cpython3_3.7/build/tables/nodes copying tables/nodes/filenode.py -> /<>/.pybuild/cpython3_3.7/build/tables/nodes copying tables/nodes/__init__.py -> /<>/.pybuild/cpython3_3.7/build/tables/nodes creating /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_array.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_index_backcompat.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_aux.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_tree.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/check_leaks.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_nestedtypes.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_numpy.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_timetype.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_links.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_all.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_garbage.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_timestamps.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_hdf5compat.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/create_backcompat_indexes.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_tables.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_create.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_earray.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/__init__.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/common.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_basics.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_lists.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_types.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_attributes.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_expression.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_indexes.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_do_undo.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_tablesMD.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_indexvalues.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_backcompat.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_carray.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_vlarray.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_queries.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_utils.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_enum.py -> /<>/.pybuild/cpython3_3.7/build/tables/tests creating /<>/.pybuild/cpython3_3.7/build/tables/nodes/tests copying tables/nodes/tests/__init__.py -> /<>/.pybuild/cpython3_3.7/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.py -> /<>/.pybuild/cpython3_3.7/build/tables/nodes/tests copying tables/tests/blosc_bigendian.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/smpl_f64le.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/ex-noattr.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/python3.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/zerodim-attrs-1.3.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/flavored_vlarrays-format1.6.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/Tables_lzo1.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/Table2_1_lzo_nrv2e_shuffle.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/smpl_SDSextendible.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/attr-u16.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/smpl_f64be.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/elink2.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/smpl_i32be.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/smpl_i32le.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/smpl_i64le.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/issue_368.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/float.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/vlstr_attr.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/non-chunked-table.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/oldflavor_numeric.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/smpl_unsupptype.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/nested-type-with-gaps.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/indexes_2_0.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_szip.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/smpl_compound_chunked.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/indexes_2_1.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/Tables_lzo2.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/smpl_i64be.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/Tables_lzo1_shuffle.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/times-nested-be.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/bug-idx.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/idx-std-1.x.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/array_mdatom.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/issue_560.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/smpl_enum.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/elink.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/Tables_lzo2_shuffle.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/python2.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/slink.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/time-table-vlarray-1_x.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/zerodim-attrs-1.4.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/scalar.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/vlunicode_endian.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_ref_array2.mat -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/matlab_file.mat -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/tests/test_ref_array1.mat -> /<>/.pybuild/cpython3_3.7/build/tables/tests copying tables/nodes/tests/test_filenode.dat -> /<>/.pybuild/cpython3_3.7/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.xbm -> /<>/.pybuild/cpython3_3.7/build/tables/nodes/tests copying tables/nodes/tests/test_filenode_v1.h5 -> /<>/.pybuild/cpython3_3.7/build/tables/nodes/tests running build_ext building 'tables.utilsextension' extension creating build/temp.linux-armhf-3.7 creating build/temp.linux-armhf-3.7/tables creating build/temp.linux-armhf-3.7/src creating build/temp.linux-armhf-3.7/hdf5-blosc creating build/temp.linux-armhf-3.7/hdf5-blosc/src arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c tables/utilsextension.c -o build/temp.linux-armhf-3.7/tables/utilsextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/utilsextension.c:612: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_34blosc_compressor_list’: tables/utilsextension.c:7155:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 7155 | __pyx_t_1 = blosc_list_compressors(); | ^ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_36blosc_compcode_to_compname_’: tables/utilsextension.c:7329:56: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 7329 | __pyx_t_2 = ((blosc_compcode_to_compname(__pyx_t_1, (&__pyx_v_cname)) >= 0) != 0); | ~^~~~~~~~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from tables/utilsextension.c:619: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_40which_class’: tables/utilsextension.c:8140:52: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 8140 | __pyx_t_2 = (((__pyx_v_maxdims[__pyx_v_i]) == -1LL) != 0); | ^~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_58hdf5_to_np_nested_type’: tables/utilsextension.c:12423:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12423 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ^ tables/utilsextension.c: In function ‘__pyx_f_6tables_14utilsextension_load_reference’: tables/utilsextension.c:15222:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 15222 | for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { | ^ tables/utilsextension.c:15449:52: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 15449 | __pyx_t_3 = (((__pyx_v_maxdims[__pyx_v_j]) == -1LL) != 0); | ^~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/utils.c -o build/temp.linux-armhf-3.7/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/H5ARRAY.c -o build/temp.linux-armhf-3.7/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/H5ATTR.c -o build/temp.linux-armhf-3.7/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.7/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/tables/utilsextension.o build/temp.linux-armhf-3.7/src/utils.o build/temp.linux-armhf-3.7/src/H5ARRAY.o build/temp.linux-armhf-3.7/src/H5ATTR.o build/temp.linux-armhf-3.7/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.7/build/tables/utilsextension.cpython-37m-arm-linux-gnueabihf.so building 'tables.hdf5extension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c tables/hdf5extension.c -o build/temp.linux-armhf-3.7/tables/hdf5extension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/hdf5extension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/hdf5extension.c: In function ‘__pyx_pf_6tables_13hdf5extension_5Array_4_open_array’: tables/hdf5extension.c:18511:54: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 18511 | __pyx_t_5 = (((__pyx_v_self->maxdims[__pyx_v_i]) == -1LL) != 0); | ^~ tables/hdf5extension.c: In function ‘__pyx_pf_6tables_13hdf5extension_7VLArray_10_read_array’: tables/hdf5extension.c:26272:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 26272 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_5; __pyx_v_i++) { | ^ tables/hdf5extension.c: In function ‘__Pyx_PyInt_As_hbool_t’: tables/hdf5extension.c:38142:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38142 | return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/hdf5extension.c:38160:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38160 | return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/hdf5extension.c:38178:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38178 | return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/utils.c -o build/temp.linux-armhf-3.7/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/typeconv.c -o build/temp.linux-armhf-3.7/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/H5ARRAY.c -o build/temp.linux-armhf-3.7/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-3.7/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/H5VLARRAY.c -o build/temp.linux-armhf-3.7/src/H5VLARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/H5ATTR.c -o build/temp.linux-armhf-3.7/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.7/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/tables/hdf5extension.o build/temp.linux-armhf-3.7/src/utils.o build/temp.linux-armhf-3.7/src/typeconv.o build/temp.linux-armhf-3.7/src/H5ARRAY.o build/temp.linux-armhf-3.7/src/H5ARRAY-opt.o build/temp.linux-armhf-3.7/src/H5VLARRAY.o build/temp.linux-armhf-3.7/src/H5ATTR.o build/temp.linux-armhf-3.7/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.7/build/tables/hdf5extension.cpython-37m-arm-linux-gnueabihf.so building 'tables.tableextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c tables/tableextension.c -o build/temp.linux-armhf-3.7/tables/tableextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/tableextension.c:612: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_5Table_get_nested_type’: tables/tableextension.c:4685:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 4685 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row__init_loop’: tables/tableextension.c:11680:37: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 11680 | __pyx_t_2 = (__pyx_v_self->stop < __pyx_v_self->nrows); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__indexed’: tables/tableextension.c:12102:45: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12102 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:12332:47: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 12332 | __pyx_t_1 = ((__pyx_v_self->nrowsread > __pyx_v_self->stop) != 0); | ^ tables/tableextension.c:12370:33: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12370 | __pyx_t_1 = ((__pyx_v_j == __pyx_v_self->nchunksinbuf) != 0); | ^~ tables/tableextension.c:12662:58: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 12662 | __pyx_t_1 = (((__pyx_v_self->lenbuf + __pyx_t_8) < __pyx_v_self->iterseq_max_elements) != 0); | ^ tables/tableextension.c:12760:38: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12760 | __pyx_t_1 = ((__pyx_v_self->_row == __pyx_v_self->lenbuf) != 0); | ^~ tables/tableextension.c:12826:42: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12826 | __pyx_t_11 = ((__pyx_v_self->_nrow < __pyx_v_self->start) != 0); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__coords’: tables/tableextension.c:13057:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13057 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:13067:76: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 13067 | __pyx_t_1 = (((__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf) > __pyx_v_self->stop) != 0); | ^ tables/tableextension.c:13412:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘long long unsigned int’ [-Wsign-compare] 13412 | __pyx_t_1 = ((__pyx_v_self->nextelement < ((__pyx_v_self->start - ((PY_LONG_LONG)__pyx_v_self->nrowsread)) + 1)) != 0); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__inkernel’: tables/tableextension.c:13763:45: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13763 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:13774:49: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13774 | __pyx_t_1 = ((__pyx_v_self->nextelement >= (__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf)) != 0); | ^~ tables/tableextension.c:13803:41: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13803 | __pyx_t_1 = ((__pyx_v_self->stopb > __pyx_v_self->nrowsinbuf) != 0); | ^ tables/tableextension.c:14065:43: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14065 | __pyx_t_10 = ((__pyx_v_self->step >= __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__general’: tables/tableextension.c:14366:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14366 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:14377:51: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14377 | __pyx_t_1 = ((__pyx_v_self->nextelement >= (__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf)) != 0); | ^~ tables/tableextension.c:14406:43: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14406 | __pyx_t_1 = ((__pyx_v_self->stopb > __pyx_v_self->nrowsinbuf) != 0); | ^ tables/tableextension.c:14677:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14677 | __pyx_t_1 = ((__pyx_v_self->nextelement < ((__pyx_v_self->start - __pyx_v_self->nrowsread) + 1)) != 0); | ^ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_8_fill_col’: tables/tableextension.c:15434:36: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 15434 | __pyx_t_7 = ((__pyx_v_istopb > __pyx_v_inrowsinbuf) != 0); | ^ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_10append’: tables/tableextension.c:16452:46: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 16452 | __pyx_t_1 = ((__pyx_v_self->_unsaved_nrows == __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_16update’: tables/tableextension.c:16967:42: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 16967 | __pyx_t_3 = ((__pyx_v_self->_mod_nrows == __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__Pyx_PyInt_As_hbool_t’: tables/tableextension.c:26737:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26737 | return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/tableextension.c:26755:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26755 | return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/tableextension.c:26773:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26773 | return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/utils.c -o build/temp.linux-armhf-3.7/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/typeconv.c -o build/temp.linux-armhf-3.7/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/H5TB-opt.c -o build/temp.linux-armhf-3.7/src/H5TB-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/H5ATTR.c -o build/temp.linux-armhf-3.7/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.7/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/tables/tableextension.o build/temp.linux-armhf-3.7/src/utils.o build/temp.linux-armhf-3.7/src/typeconv.o build/temp.linux-armhf-3.7/src/H5TB-opt.o build/temp.linux-armhf-3.7/src/H5ATTR.o build/temp.linux-armhf-3.7/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.7/build/tables/tableextension.cpython-37m-arm-linux-gnueabihf.so building 'tables._comp_lzo' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c tables/_comp_lzo.c -o build/temp.linux-armhf-3.7/tables/_comp_lzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/H5Zlzo.c -o build/temp.linux-armhf-3.7/src/H5Zlzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/tables/_comp_lzo.o build/temp.linux-armhf-3.7/src/H5Zlzo.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -llzo2 -o /<>/.pybuild/cpython3_3.7/build/tables/_comp_lzo.cpython-37m-arm-linux-gnueabihf.so building 'tables._comp_bzip2' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c tables/_comp_bzip2.c -o build/temp.linux-armhf-3.7/tables/_comp_bzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/H5Zbzip2.c -o build/temp.linux-armhf-3.7/src/H5Zbzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/tables/_comp_bzip2.o build/temp.linux-armhf-3.7/src/H5Zbzip2.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lbz2 -o /<>/.pybuild/cpython3_3.7/build/tables/_comp_bzip2.cpython-37m-arm-linux-gnueabihf.so building 'tables.linkextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c tables/linkextension.c -o build/temp.linux-armhf-3.7/tables/linkextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/linkextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/tables/linkextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.7/build/tables/linkextension.cpython-37m-arm-linux-gnueabihf.so building 'tables.lrucacheextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c tables/lrucacheextension.c -o build/temp.linux-armhf-3.7/tables/lrucacheextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/lrucacheextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/tables/lrucacheextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -o /<>/.pybuild/cpython3_3.7/build/tables/lrucacheextension.cpython-37m-arm-linux-gnueabihf.so building 'tables.indexesextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c tables/indexesextension.c -o build/temp.linux-armhf-3.7/tables/indexesextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/indexesextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/indexesextension.c: In function ‘__pyx_f_6tables_16indexesextension__keysort_string’: tables/indexesextension.c:14109:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 14109 | __pyx_t_1 = (((__pyx_v_pr - __pyx_v_pl) > (15 * __pyx_v_ss)) != 0); | ^ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-3.7/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/idx-opt.c -o build/temp.linux-armhf-3.7/src/idx-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/tables/indexesextension.o build/temp.linux-armhf-3.7/src/H5ARRAY-opt.o build/temp.linux-armhf-3.7/src/idx-opt.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.7/build/tables/indexesextension.cpython-37m-arm-linux-gnueabihf.so /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) I: pybuild base:217: /usr/bin/python3.8-dbg setup.py build /tmp/lzo_version_date6d2wooi2.c: In function ‘main’: /tmp/lzo_version_date6d2wooi2.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersionunekb_gj.c: In function ‘main’: /tmp/BZ2_bzlibVersionunekb_gj.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ * Using Python 3.8.0 (default, Oct 20 2019, 16:00:25) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running build running build_py creating /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/group.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/exceptions.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/array.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/filters.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/leaf.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/vlarray.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/parameters.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/attributeset.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/table.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/conditions.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/__init__.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/expression.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/link.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/unimplemented.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/file.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/earray.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/indexes.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/undoredo.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/registry.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/atom.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/idxutils.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/carray.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/utils.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/flavor.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/req_versions.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/index.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/node.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/description.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables copying tables/path.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables creating /<>/.pybuild/cpython3_3.8_dbg/build/tables/scripts copying tables/scripts/ptrepack.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/scripts copying tables/scripts/ptdump.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/scripts copying tables/scripts/__init__.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/scripts copying tables/scripts/pt2to3.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/scripts copying tables/scripts/pttree.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/scripts creating /<>/.pybuild/cpython3_3.8_dbg/build/tables/misc copying tables/misc/enum.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/misc copying tables/misc/proxydict.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/misc copying tables/misc/__init__.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/misc creating /<>/.pybuild/cpython3_3.8_dbg/build/tables/nodes copying tables/nodes/filenode.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/nodes copying tables/nodes/__init__.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/nodes creating /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_array.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_index_backcompat.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_aux.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_tree.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/check_leaks.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_nestedtypes.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_numpy.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_timetype.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_links.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_all.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_garbage.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_timestamps.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_hdf5compat.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/create_backcompat_indexes.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_tables.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_create.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_earray.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/common.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_basics.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_lists.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_types.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_attributes.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_expression.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_indexes.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_do_undo.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_tablesMD.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_indexvalues.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_backcompat.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_carray.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_vlarray.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_queries.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_utils.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_enum.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests creating /<>/.pybuild/cpython3_3.8_dbg/build/tables/nodes/tests copying tables/nodes/tests/__init__.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.py -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/nodes/tests copying tables/tests/blosc_bigendian.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/smpl_f64le.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/ex-noattr.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/python3.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/zerodim-attrs-1.3.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/flavored_vlarrays-format1.6.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/Tables_lzo1.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/Table2_1_lzo_nrv2e_shuffle.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/smpl_SDSextendible.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/attr-u16.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/smpl_f64be.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/elink2.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/smpl_i32be.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/smpl_i32le.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/smpl_i64le.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/issue_368.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/float.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/vlstr_attr.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/non-chunked-table.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/oldflavor_numeric.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/smpl_unsupptype.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/nested-type-with-gaps.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/indexes_2_0.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_szip.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/smpl_compound_chunked.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/indexes_2_1.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/Tables_lzo2.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/smpl_i64be.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/Tables_lzo1_shuffle.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/times-nested-be.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/bug-idx.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/idx-std-1.x.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/array_mdatom.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/issue_560.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/smpl_enum.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/elink.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/Tables_lzo2_shuffle.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/python2.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/slink.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/time-table-vlarray-1_x.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/zerodim-attrs-1.4.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/scalar.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/vlunicode_endian.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_ref_array2.mat -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/matlab_file.mat -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/tests/test_ref_array1.mat -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/tests copying tables/nodes/tests/test_filenode.dat -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.xbm -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/nodes/tests copying tables/nodes/tests/test_filenode_v1.h5 -> /<>/.pybuild/cpython3_3.8_dbg/build/tables/nodes/tests running build_ext building 'tables.utilsextension' extension creating build/temp.linux-armhf-3.8-pydebug creating build/temp.linux-armhf-3.8-pydebug/tables creating build/temp.linux-armhf-3.8-pydebug/src creating build/temp.linux-armhf-3.8-pydebug/hdf5-blosc creating build/temp.linux-armhf-3.8-pydebug/hdf5-blosc/src arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c tables/utilsextension.c -o build/temp.linux-armhf-3.8-pydebug/tables/utilsextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/utilsextension.c:612: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_34blosc_compressor_list’: tables/utilsextension.c:7155:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 7155 | __pyx_t_1 = blosc_list_compressors(); | ^ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_36blosc_compcode_to_compname_’: tables/utilsextension.c:7329:56: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 7329 | __pyx_t_2 = ((blosc_compcode_to_compname(__pyx_t_1, (&__pyx_v_cname)) >= 0) != 0); | ~^~~~~~~~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from tables/utilsextension.c:619: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_40which_class’: tables/utilsextension.c:8140:52: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 8140 | __pyx_t_2 = (((__pyx_v_maxdims[__pyx_v_i]) == -1LL) != 0); | ^~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_58hdf5_to_np_nested_type’: tables/utilsextension.c:12423:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12423 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ^ tables/utilsextension.c: In function ‘__pyx_f_6tables_14utilsextension_load_reference’: tables/utilsextension.c:15222:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 15222 | for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { | ^ tables/utilsextension.c:15449:52: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 15449 | __pyx_t_3 = (((__pyx_v_maxdims[__pyx_v_j]) == -1LL) != 0); | ^~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/utils.c -o build/temp.linux-armhf-3.8-pydebug/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/H5ARRAY.c -o build/temp.linux-armhf-3.8-pydebug/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/H5ATTR.c -o build/temp.linux-armhf-3.8-pydebug/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.8-pydebug/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8-pydebug/tables/utilsextension.o build/temp.linux-armhf-3.8-pydebug/src/utils.o build/temp.linux-armhf-3.8-pydebug/src/H5ARRAY.o build/temp.linux-armhf-3.8-pydebug/src/H5ATTR.o build/temp.linux-armhf-3.8-pydebug/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.8_dbg/build/tables/utilsextension.cpython-38d-arm-linux-gnueabihf.so building 'tables.hdf5extension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c tables/hdf5extension.c -o build/temp.linux-armhf-3.8-pydebug/tables/hdf5extension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/hdf5extension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/hdf5extension.c: In function ‘__pyx_pf_6tables_13hdf5extension_5Array_4_open_array’: tables/hdf5extension.c:18511:54: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 18511 | __pyx_t_5 = (((__pyx_v_self->maxdims[__pyx_v_i]) == -1LL) != 0); | ^~ tables/hdf5extension.c: In function ‘__pyx_pf_6tables_13hdf5extension_7VLArray_10_read_array’: tables/hdf5extension.c:26272:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 26272 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_5; __pyx_v_i++) { | ^ tables/hdf5extension.c: In function ‘__Pyx_PyInt_As_hbool_t’: tables/hdf5extension.c:38142:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38142 | return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/hdf5extension.c:38160:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38160 | return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/hdf5extension.c:38178:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38178 | return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/utils.c -o build/temp.linux-armhf-3.8-pydebug/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/typeconv.c -o build/temp.linux-armhf-3.8-pydebug/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/H5ARRAY.c -o build/temp.linux-armhf-3.8-pydebug/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-3.8-pydebug/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/H5VLARRAY.c -o build/temp.linux-armhf-3.8-pydebug/src/H5VLARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/H5ATTR.c -o build/temp.linux-armhf-3.8-pydebug/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.8-pydebug/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8-pydebug/tables/hdf5extension.o build/temp.linux-armhf-3.8-pydebug/src/utils.o build/temp.linux-armhf-3.8-pydebug/src/typeconv.o build/temp.linux-armhf-3.8-pydebug/src/H5ARRAY.o build/temp.linux-armhf-3.8-pydebug/src/H5ARRAY-opt.o build/temp.linux-armhf-3.8-pydebug/src/H5VLARRAY.o build/temp.linux-armhf-3.8-pydebug/src/H5ATTR.o build/temp.linux-armhf-3.8-pydebug/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.8_dbg/build/tables/hdf5extension.cpython-38d-arm-linux-gnueabihf.so building 'tables.tableextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c tables/tableextension.c -o build/temp.linux-armhf-3.8-pydebug/tables/tableextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/tableextension.c:612: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_5Table_get_nested_type’: tables/tableextension.c:4685:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 4685 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row__init_loop’: tables/tableextension.c:11680:37: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 11680 | __pyx_t_2 = (__pyx_v_self->stop < __pyx_v_self->nrows); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__indexed’: tables/tableextension.c:12102:45: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12102 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:12332:47: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 12332 | __pyx_t_1 = ((__pyx_v_self->nrowsread > __pyx_v_self->stop) != 0); | ^ tables/tableextension.c:12370:33: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12370 | __pyx_t_1 = ((__pyx_v_j == __pyx_v_self->nchunksinbuf) != 0); | ^~ tables/tableextension.c:12662:58: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 12662 | __pyx_t_1 = (((__pyx_v_self->lenbuf + __pyx_t_8) < __pyx_v_self->iterseq_max_elements) != 0); | ^ tables/tableextension.c:12760:38: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12760 | __pyx_t_1 = ((__pyx_v_self->_row == __pyx_v_self->lenbuf) != 0); | ^~ tables/tableextension.c:12826:42: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12826 | __pyx_t_11 = ((__pyx_v_self->_nrow < __pyx_v_self->start) != 0); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__coords’: tables/tableextension.c:13057:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13057 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:13067:76: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 13067 | __pyx_t_1 = (((__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf) > __pyx_v_self->stop) != 0); | ^ tables/tableextension.c:13412:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘long long unsigned int’ [-Wsign-compare] 13412 | __pyx_t_1 = ((__pyx_v_self->nextelement < ((__pyx_v_self->start - ((PY_LONG_LONG)__pyx_v_self->nrowsread)) + 1)) != 0); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__inkernel’: tables/tableextension.c:13763:45: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13763 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:13774:49: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13774 | __pyx_t_1 = ((__pyx_v_self->nextelement >= (__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf)) != 0); | ^~ tables/tableextension.c:13803:41: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13803 | __pyx_t_1 = ((__pyx_v_self->stopb > __pyx_v_self->nrowsinbuf) != 0); | ^ tables/tableextension.c:14065:43: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14065 | __pyx_t_10 = ((__pyx_v_self->step >= __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__general’: tables/tableextension.c:14366:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14366 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:14377:51: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14377 | __pyx_t_1 = ((__pyx_v_self->nextelement >= (__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf)) != 0); | ^~ tables/tableextension.c:14406:43: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14406 | __pyx_t_1 = ((__pyx_v_self->stopb > __pyx_v_self->nrowsinbuf) != 0); | ^ tables/tableextension.c:14677:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14677 | __pyx_t_1 = ((__pyx_v_self->nextelement < ((__pyx_v_self->start - __pyx_v_self->nrowsread) + 1)) != 0); | ^ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_8_fill_col’: tables/tableextension.c:15434:36: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 15434 | __pyx_t_7 = ((__pyx_v_istopb > __pyx_v_inrowsinbuf) != 0); | ^ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_10append’: tables/tableextension.c:16452:46: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 16452 | __pyx_t_1 = ((__pyx_v_self->_unsaved_nrows == __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_16update’: tables/tableextension.c:16967:42: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 16967 | __pyx_t_3 = ((__pyx_v_self->_mod_nrows == __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__Pyx_PyInt_As_hbool_t’: tables/tableextension.c:26737:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26737 | return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/tableextension.c:26755:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26755 | return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/tableextension.c:26773:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26773 | return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/utils.c -o build/temp.linux-armhf-3.8-pydebug/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/typeconv.c -o build/temp.linux-armhf-3.8-pydebug/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/H5TB-opt.c -o build/temp.linux-armhf-3.8-pydebug/src/H5TB-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/H5ATTR.c -o build/temp.linux-armhf-3.8-pydebug/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.8-pydebug/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8-pydebug/tables/tableextension.o build/temp.linux-armhf-3.8-pydebug/src/utils.o build/temp.linux-armhf-3.8-pydebug/src/typeconv.o build/temp.linux-armhf-3.8-pydebug/src/H5TB-opt.o build/temp.linux-armhf-3.8-pydebug/src/H5ATTR.o build/temp.linux-armhf-3.8-pydebug/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.8_dbg/build/tables/tableextension.cpython-38d-arm-linux-gnueabihf.so building 'tables._comp_lzo' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c tables/_comp_lzo.c -o build/temp.linux-armhf-3.8-pydebug/tables/_comp_lzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/H5Zlzo.c -o build/temp.linux-armhf-3.8-pydebug/src/H5Zlzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8-pydebug/tables/_comp_lzo.o build/temp.linux-armhf-3.8-pydebug/src/H5Zlzo.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -llzo2 -o /<>/.pybuild/cpython3_3.8_dbg/build/tables/_comp_lzo.cpython-38d-arm-linux-gnueabihf.so building 'tables._comp_bzip2' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c tables/_comp_bzip2.c -o build/temp.linux-armhf-3.8-pydebug/tables/_comp_bzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/H5Zbzip2.c -o build/temp.linux-armhf-3.8-pydebug/src/H5Zbzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8-pydebug/tables/_comp_bzip2.o build/temp.linux-armhf-3.8-pydebug/src/H5Zbzip2.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lbz2 -o /<>/.pybuild/cpython3_3.8_dbg/build/tables/_comp_bzip2.cpython-38d-arm-linux-gnueabihf.so building 'tables.linkextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c tables/linkextension.c -o build/temp.linux-armhf-3.8-pydebug/tables/linkextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/linkextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8-pydebug/tables/linkextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.8_dbg/build/tables/linkextension.cpython-38d-arm-linux-gnueabihf.so building 'tables.lrucacheextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c tables/lrucacheextension.c -o build/temp.linux-armhf-3.8-pydebug/tables/lrucacheextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/lrucacheextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8-pydebug/tables/lrucacheextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -o /<>/.pybuild/cpython3_3.8_dbg/build/tables/lrucacheextension.cpython-38d-arm-linux-gnueabihf.so building 'tables.indexesextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c tables/indexesextension.c -o build/temp.linux-armhf-3.8-pydebug/tables/indexesextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/indexesextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/indexesextension.c: In function ‘__pyx_f_6tables_16indexesextension__keysort_string’: tables/indexesextension.c:14109:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 14109 | __pyx_t_1 = (((__pyx_v_pr - __pyx_v_pl) > (15 * __pyx_v_ss)) != 0); | ^ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-3.8-pydebug/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c src/idx-opt.c -o build/temp.linux-armhf-3.8-pydebug/src/idx-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8-pydebug/tables/indexesextension.o build/temp.linux-armhf-3.8-pydebug/src/H5ARRAY-opt.o build/temp.linux-armhf-3.8-pydebug/src/idx-opt.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.8_dbg/build/tables/indexesextension.cpython-38d-arm-linux-gnueabihf.so setup.py:365: DeprecationWarning: invalid escape sequence \s major_version = int(re.split("\s+", line)[2]) setup.py:367: DeprecationWarning: invalid escape sequence \s minor_version = int(re.split("\s+", line)[2]) setup.py:369: DeprecationWarning: invalid escape sequence \s release_version = int(re.split("\s+", line)[2]) setup.py:387: DeprecationWarning: invalid escape sequence \s major_version = int(re.split("\s+", line)[2]) setup.py:389: DeprecationWarning: invalid escape sequence \s minor_version = int(re.split("\s+", line)[2]) setup.py:391: DeprecationWarning: invalid escape sequence \s release_version = int(re.split("\s+", line)[2]) /usr/lib/python3/dist-packages/setuptools/depends.py:2: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses import imp setup.py:394: ResourceWarning: unclosed file <_io.TextIOWrapper name='/usr/include/blosc.h' mode='r' encoding='UTF-8'> break ResourceWarning: Enable tracemalloc to get the object allocation traceback /usr/lib/python3.8/distutils/dist.py:274: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) I: pybuild base:217: /usr/bin/python3-dbg setup.py build /tmp/lzo_version_dateivexvjz8.c: In function ‘main’: /tmp/lzo_version_dateivexvjz8.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersionm90amg8n.c: In function ‘main’: /tmp/BZ2_bzlibVersionm90amg8n.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ * Using Python 3.7.5 (default, Oct 15 2019, 16:15:10) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running build running build_py creating /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/group.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/exceptions.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/array.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/filters.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/leaf.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/vlarray.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/parameters.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/attributeset.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/table.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/conditions.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/__init__.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/expression.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/link.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/unimplemented.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/file.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/earray.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/indexes.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/undoredo.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/registry.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/atom.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/idxutils.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/carray.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/utils.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/flavor.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/req_versions.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/index.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/node.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/description.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables copying tables/path.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables creating /<>/.pybuild/cpython3_3.7_dbg/build/tables/scripts copying tables/scripts/ptrepack.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/scripts copying tables/scripts/ptdump.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/scripts copying tables/scripts/__init__.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/scripts copying tables/scripts/pt2to3.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/scripts copying tables/scripts/pttree.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/scripts creating /<>/.pybuild/cpython3_3.7_dbg/build/tables/misc copying tables/misc/enum.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/misc copying tables/misc/proxydict.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/misc copying tables/misc/__init__.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/misc creating /<>/.pybuild/cpython3_3.7_dbg/build/tables/nodes copying tables/nodes/filenode.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/nodes copying tables/nodes/__init__.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/nodes creating /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_array.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_index_backcompat.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_aux.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_tree.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/check_leaks.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_nestedtypes.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_numpy.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_timetype.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_links.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_all.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_garbage.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_timestamps.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_hdf5compat.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/create_backcompat_indexes.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_tables.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_create.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_earray.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/__init__.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/common.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_basics.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_lists.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_types.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_attributes.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_expression.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_indexes.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_do_undo.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_tablesMD.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_indexvalues.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_backcompat.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_carray.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_vlarray.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_queries.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_utils.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_enum.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests creating /<>/.pybuild/cpython3_3.7_dbg/build/tables/nodes/tests copying tables/nodes/tests/__init__.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.py -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/nodes/tests copying tables/tests/blosc_bigendian.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/smpl_f64le.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/ex-noattr.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/python3.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/zerodim-attrs-1.3.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/flavored_vlarrays-format1.6.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/Tables_lzo1.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/Table2_1_lzo_nrv2e_shuffle.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/smpl_SDSextendible.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/attr-u16.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/smpl_f64be.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/elink2.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/smpl_i32be.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/smpl_i32le.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/smpl_i64le.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/issue_368.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/float.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/vlstr_attr.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/non-chunked-table.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/oldflavor_numeric.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/smpl_unsupptype.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/nested-type-with-gaps.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/indexes_2_0.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_szip.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/smpl_compound_chunked.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/indexes_2_1.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/Tables_lzo2.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/smpl_i64be.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/Tables_lzo1_shuffle.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/times-nested-be.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/bug-idx.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/idx-std-1.x.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/array_mdatom.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/issue_560.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/smpl_enum.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/elink.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/Tables_lzo2_shuffle.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/python2.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/slink.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/time-table-vlarray-1_x.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/zerodim-attrs-1.4.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/scalar.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/vlunicode_endian.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_ref_array2.mat -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/matlab_file.mat -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/tests/test_ref_array1.mat -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/tests copying tables/nodes/tests/test_filenode.dat -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/nodes/tests copying tables/nodes/tests/test_filenode.xbm -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/nodes/tests copying tables/nodes/tests/test_filenode_v1.h5 -> /<>/.pybuild/cpython3_3.7_dbg/build/tables/nodes/tests running build_ext building 'tables.utilsextension' extension creating build/temp.linux-armhf-3.7-pydebug creating build/temp.linux-armhf-3.7-pydebug/tables creating build/temp.linux-armhf-3.7-pydebug/src creating build/temp.linux-armhf-3.7-pydebug/hdf5-blosc creating build/temp.linux-armhf-3.7-pydebug/hdf5-blosc/src arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c tables/utilsextension.c -o build/temp.linux-armhf-3.7-pydebug/tables/utilsextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/utilsextension.c:612: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_34blosc_compressor_list’: tables/utilsextension.c:7155:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 7155 | __pyx_t_1 = blosc_list_compressors(); | ^ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_36blosc_compcode_to_compname_’: tables/utilsextension.c:7329:56: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 7329 | __pyx_t_2 = ((blosc_compcode_to_compname(__pyx_t_1, (&__pyx_v_cname)) >= 0) != 0); | ~^~~~~~~~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from tables/utilsextension.c:619: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_40which_class’: tables/utilsextension.c:8140:52: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 8140 | __pyx_t_2 = (((__pyx_v_maxdims[__pyx_v_i]) == -1LL) != 0); | ^~ tables/utilsextension.c: In function ‘__pyx_pf_6tables_14utilsextension_58hdf5_to_np_nested_type’: tables/utilsextension.c:12423:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12423 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ^ tables/utilsextension.c: In function ‘__pyx_f_6tables_14utilsextension_load_reference’: tables/utilsextension.c:15222:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 15222 | for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { | ^ tables/utilsextension.c:15449:52: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 15449 | __pyx_t_3 = (((__pyx_v_maxdims[__pyx_v_j]) == -1LL) != 0); | ^~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/utils.c -o build/temp.linux-armhf-3.7-pydebug/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/H5ARRAY.c -o build/temp.linux-armhf-3.7-pydebug/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/H5ATTR.c -o build/temp.linux-armhf-3.7-pydebug/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.7-pydebug/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7-pydebug/tables/utilsextension.o build/temp.linux-armhf-3.7-pydebug/src/utils.o build/temp.linux-armhf-3.7-pydebug/src/H5ARRAY.o build/temp.linux-armhf-3.7-pydebug/src/H5ATTR.o build/temp.linux-armhf-3.7-pydebug/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.7_dbg/build/tables/utilsextension.cpython-37dm-arm-linux-gnueabihf.so building 'tables.hdf5extension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c tables/hdf5extension.c -o build/temp.linux-armhf-3.7-pydebug/tables/hdf5extension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/hdf5extension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/hdf5extension.c: In function ‘__pyx_pf_6tables_13hdf5extension_5Array_4_open_array’: tables/hdf5extension.c:18511:54: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 18511 | __pyx_t_5 = (((__pyx_v_self->maxdims[__pyx_v_i]) == -1LL) != 0); | ^~ tables/hdf5extension.c: In function ‘__pyx_pf_6tables_13hdf5extension_7VLArray_10_read_array’: tables/hdf5extension.c:26272:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 26272 | for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_5; __pyx_v_i++) { | ^ tables/hdf5extension.c: In function ‘__Pyx_PyInt_As_hbool_t’: tables/hdf5extension.c:38142:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38142 | return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/hdf5extension.c:38160:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38160 | return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/hdf5extension.c:38178:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38178 | return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/utils.c -o build/temp.linux-armhf-3.7-pydebug/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/typeconv.c -o build/temp.linux-armhf-3.7-pydebug/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/H5ARRAY.c -o build/temp.linux-armhf-3.7-pydebug/src/H5ARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5ARRAY.c:4: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-3.7-pydebug/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/H5VLARRAY.c -o build/temp.linux-armhf-3.7-pydebug/src/H5VLARRAY.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/H5VLARRAY.c:3: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/H5ATTR.c -o build/temp.linux-armhf-3.7-pydebug/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.7-pydebug/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7-pydebug/tables/hdf5extension.o build/temp.linux-armhf-3.7-pydebug/src/utils.o build/temp.linux-armhf-3.7-pydebug/src/typeconv.o build/temp.linux-armhf-3.7-pydebug/src/H5ARRAY.o build/temp.linux-armhf-3.7-pydebug/src/H5ARRAY-opt.o build/temp.linux-armhf-3.7-pydebug/src/H5VLARRAY.o build/temp.linux-armhf-3.7-pydebug/src/H5ATTR.o build/temp.linux-armhf-3.7-pydebug/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.7_dbg/build/tables/hdf5extension.cpython-37dm-arm-linux-gnueabihf.so building 'tables.tableextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c tables/tableextension.c -o build/temp.linux-armhf-3.7-pydebug/tables/tableextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/tableextension.c:612: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_5Table_get_nested_type’: tables/tableextension.c:4685:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 4685 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row__init_loop’: tables/tableextension.c:11680:37: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 11680 | __pyx_t_2 = (__pyx_v_self->stop < __pyx_v_self->nrows); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__indexed’: tables/tableextension.c:12102:45: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12102 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:12332:47: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 12332 | __pyx_t_1 = ((__pyx_v_self->nrowsread > __pyx_v_self->stop) != 0); | ^ tables/tableextension.c:12370:33: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12370 | __pyx_t_1 = ((__pyx_v_j == __pyx_v_self->nchunksinbuf) != 0); | ^~ tables/tableextension.c:12662:58: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 12662 | __pyx_t_1 = (((__pyx_v_self->lenbuf + __pyx_t_8) < __pyx_v_self->iterseq_max_elements) != 0); | ^ tables/tableextension.c:12760:38: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12760 | __pyx_t_1 = ((__pyx_v_self->_row == __pyx_v_self->lenbuf) != 0); | ^~ tables/tableextension.c:12826:42: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 12826 | __pyx_t_11 = ((__pyx_v_self->_nrow < __pyx_v_self->start) != 0); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__coords’: tables/tableextension.c:13057:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13057 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:13067:76: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare] 13067 | __pyx_t_1 = (((__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf) > __pyx_v_self->stop) != 0); | ^ tables/tableextension.c:13412:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘long long unsigned int’ [-Wsign-compare] 13412 | __pyx_t_1 = ((__pyx_v_self->nextelement < ((__pyx_v_self->start - ((PY_LONG_LONG)__pyx_v_self->nrowsread)) + 1)) != 0); | ^ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__inkernel’: tables/tableextension.c:13763:45: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13763 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:13774:49: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13774 | __pyx_t_1 = ((__pyx_v_self->nextelement >= (__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf)) != 0); | ^~ tables/tableextension.c:13803:41: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 13803 | __pyx_t_1 = ((__pyx_v_self->stopb > __pyx_v_self->nrowsinbuf) != 0); | ^ tables/tableextension.c:14065:43: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14065 | __pyx_t_10 = ((__pyx_v_self->step >= __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__pyx_f_6tables_14tableextension_3Row___next__general’: tables/tableextension.c:14366:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14366 | __pyx_t_1 = ((__pyx_v_self->nextelement >= __pyx_v_self->nrowsread) != 0); | ^~ tables/tableextension.c:14377:51: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14377 | __pyx_t_1 = ((__pyx_v_self->nextelement >= (__pyx_v_self->nrowsread + __pyx_v_self->nrowsinbuf)) != 0); | ^~ tables/tableextension.c:14406:43: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14406 | __pyx_t_1 = ((__pyx_v_self->stopb > __pyx_v_self->nrowsinbuf) != 0); | ^ tables/tableextension.c:14677:47: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 14677 | __pyx_t_1 = ((__pyx_v_self->nextelement < ((__pyx_v_self->start - __pyx_v_self->nrowsread) + 1)) != 0); | ^ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_8_fill_col’: tables/tableextension.c:15434:36: warning: comparison of integer expressions of different signedness: ‘long long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 15434 | __pyx_t_7 = ((__pyx_v_istopb > __pyx_v_inrowsinbuf) != 0); | ^ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_10append’: tables/tableextension.c:16452:46: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 16452 | __pyx_t_1 = ((__pyx_v_self->_unsaved_nrows == __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__pyx_pf_6tables_14tableextension_3Row_16update’: tables/tableextension.c:16967:42: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 16967 | __pyx_t_3 = ((__pyx_v_self->_mod_nrows == __pyx_v_self->nrowsinbuf) != 0); | ^~ tables/tableextension.c: In function ‘__Pyx_PyInt_As_hbool_t’: tables/tableextension.c:26737:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26737 | return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/tableextension.c:26755:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26755 | return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tables/tableextension.c:26773:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 26773 | return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/utils.c -o build/temp.linux-armhf-3.7-pydebug/src/utils.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/utils.h:2, from src/utils.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/typeconv.c -o build/temp.linux-armhf-3.7-pydebug/src/typeconv.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/H5TB-opt.c -o build/temp.linux-armhf-3.7-pydebug/src/H5TB-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/H5ATTR.c -o build/temp.linux-armhf-3.7-pydebug/src/H5ATTR.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c hdf5-blosc/src/blosc_filter.c -o build/temp.linux-armhf-3.7-pydebug/hdf5-blosc/src/blosc_filter.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 hdf5-blosc/src/blosc_filter.c: In function ‘blosc_filter’: hdf5-blosc/src/blosc_filter.c:182:18: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 182 | complist = blosc_list_compressors(); | ^ hdf5-blosc/src/blosc_filter.c:183:46: warning: passing argument 2 of ‘blosc_compcode_to_compname’ from incompatible pointer type [-Wincompatible-pointer-types] 183 | code = blosc_compcode_to_compname(compcode, &compname); | ^~~~~~~~~ | | | char ** In file included from hdf5-blosc/src/blosc_filter.h:8, from hdf5-blosc/src/blosc_filter.c:19: /usr/include/blosc.h:348:72: note: expected ‘const char **’ but argument is of type ‘char **’ 348 | BLOSC_EXPORT int blosc_compcode_to_compname(int compcode, const char **compname); | ~~~~~~~~~~~~~^~~~~~~~ hdf5-blosc/src/blosc_filter.c:159:10: warning: unused variable ‘errmsg’ [-Wunused-variable] 159 | char errmsg[256]; | ^~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7-pydebug/tables/tableextension.o build/temp.linux-armhf-3.7-pydebug/src/utils.o build/temp.linux-armhf-3.7-pydebug/src/typeconv.o build/temp.linux-armhf-3.7-pydebug/src/H5TB-opt.o build/temp.linux-armhf-3.7-pydebug/src/H5ATTR.o build/temp.linux-armhf-3.7-pydebug/hdf5-blosc/src/blosc_filter.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.7_dbg/build/tables/tableextension.cpython-37dm-arm-linux-gnueabihf.so building 'tables._comp_lzo' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c tables/_comp_lzo.c -o build/temp.linux-armhf-3.7-pydebug/tables/_comp_lzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/H5Zlzo.c -o build/temp.linux-armhf-3.7-pydebug/src/H5Zlzo.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7-pydebug/tables/_comp_lzo.o build/temp.linux-armhf-3.7-pydebug/src/H5Zlzo.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -llzo2 -o /<>/.pybuild/cpython3_3.7_dbg/build/tables/_comp_lzo.cpython-37dm-arm-linux-gnueabihf.so building 'tables._comp_bzip2' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c tables/_comp_bzip2.c -o build/temp.linux-armhf-3.7-pydebug/tables/_comp_bzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/H5Zbzip2.c -o build/temp.linux-armhf-3.7-pydebug/src/H5Zbzip2.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7-pydebug/tables/_comp_bzip2.o build/temp.linux-armhf-3.7-pydebug/src/H5Zbzip2.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lbz2 -o /<>/.pybuild/cpython3_3.7_dbg/build/tables/_comp_bzip2.cpython-37dm-arm-linux-gnueabihf.so building 'tables.linkextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c tables/linkextension.c -o build/temp.linux-armhf-3.7-pydebug/tables/linkextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/linkextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7-pydebug/tables/linkextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.7_dbg/build/tables/linkextension.cpython-37dm-arm-linux-gnueabihf.so building 'tables.lrucacheextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c tables/lrucacheextension.c -o build/temp.linux-armhf-3.7-pydebug/tables/lrucacheextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/lrucacheextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7-pydebug/tables/lrucacheextension.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -o /<>/.pybuild/cpython3_3.7_dbg/build/tables/lrucacheextension.cpython-37dm-arm-linux-gnueabihf.so building 'tables.indexesextension' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c tables/indexesextension.c -o build/temp.linux-armhf-3.7-pydebug/tables/indexesextension.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from tables/indexesextension.c:611: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ tables/indexesextension.c: In function ‘__pyx_f_6tables_16indexesextension__keysort_string’: tables/indexesextension.c:14109:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 14109 | __pyx_t_1 = (((__pyx_v_pr - __pyx_v_pl) > (15 * __pyx_v_ss)) != 0); | ^ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/H5ARRAY-opt.c -o build/temp.linux-armhf-3.7-pydebug/src/H5ARRAY-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_BLOSC_LIB=1 -Ihdf5-blosc/src -I/usr/lib/arm-linux-gnueabihf/hdf5/serial/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7dm -c src/idx-opt.c -o build/temp.linux-armhf-3.7-pydebug/src/idx-opt.o -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Isrc -DH5_USE_18_API -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from src/idx-opt.h:2, from src/idx-opt.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7-pydebug/tables/indexesextension.o build/temp.linux-armhf-3.7-pydebug/src/H5ARRAY-opt.o build/temp.linux-armhf-3.7-pydebug/src/idx-opt.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib -lhdf5 -lblosc -o /<>/.pybuild/cpython3_3.7_dbg/build/tables/indexesextension.cpython-37dm-arm-linux-gnueabihf.so setup.py:365: DeprecationWarning: invalid escape sequence \s major_version = int(re.split("\s+", line)[2]) setup.py:367: DeprecationWarning: invalid escape sequence \s minor_version = int(re.split("\s+", line)[2]) setup.py:369: DeprecationWarning: invalid escape sequence \s release_version = int(re.split("\s+", line)[2]) setup.py:387: DeprecationWarning: invalid escape sequence \s major_version = int(re.split("\s+", line)[2]) setup.py:389: DeprecationWarning: invalid escape sequence \s minor_version = int(re.split("\s+", line)[2]) setup.py:391: DeprecationWarning: invalid escape sequence \s release_version = int(re.split("\s+", line)[2]) /usr/lib/python3/dist-packages/setuptools/depends.py:2: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses import imp setup.py:394: ResourceWarning: unclosed file <_io.TextIOWrapper name='/usr/include/blosc.h' mode='r' encoding='UTF-8'> break ResourceWarning: Enable tracemalloc to get the object allocation traceback /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) cd /<>/.pybuild/cpython3_3.8/build && \ env PYTHONPATH=. python3 -m sphinx -M html /<>/doc/source /<>/doc/build -N -D today="October 21, 2019" -D html_last_updated_fmt="October 21, 2019" Running Sphinx v1.8.5 making output directory... building [mo]: targets for 0 po files that are out of date building [html]: targets for 75 source files that are out of date updating environment: 75 added, 0 changed, 0 removed reading sources... 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[100%] usersguide/utilities WARNING: autodoc: failed to import class 'Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Atom.ndim' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Atom.recarrtype' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Atom.size' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Atom.copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Atom.from_dtype' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Atom.from_kind' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Atom.from_sctype' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Atom.from_type' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'StringAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'BoolAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'IntAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int8Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int16Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int32Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int64Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UIntAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt8Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt16Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt32Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt64Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'FloatAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Float32Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Float64Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'ComplexAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Time32Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Time64Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'EnumAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'ObjectAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'VLStringAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'VLUnicodeAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Col.from_atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'StringCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'BoolCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'IntCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int8Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int16Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int32Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int64Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UIntCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt8Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt16Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt32Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt64Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Float32Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Float64Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'ComplexCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'TimeCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Time32Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Time64Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'EnumCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'IsDescription' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'description.descr_from_dtype' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'description.dtype_from_descr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'attributeset.AttributeSet' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'attributeset.AttributeSet._v_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'attributeset.AttributeSet._f_copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'attributeset.AttributeSet._f_list' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'attributeset.AttributeSet._f_rename' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'attributeset.AttributeSet.__contains__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Expr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Expr.eval' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Expr.set_inputs_range' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Expr.set_output' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Expr.set_output_range' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Expr.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'File' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'File.title' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'File.filters' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'File.open_count' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.copy_file' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.flush' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.fileno' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__enter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__exit__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__str__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__repr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_file_image' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_filesize' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_userblock_size' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.copy_children' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.copy_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_array' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_carray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_earray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_external_link' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_group' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_hard_link' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_soft_link' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_table' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_vlarray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.move_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.remove_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.rename_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.is_visible_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.iter_nodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.list_nodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.walk_groups' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.walk_nodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__contains__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.disable_undo' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.enable_undo' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_current_mark' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.goto' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.is_undo_enabled' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.mark' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.redo' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.undo' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.copy_node_attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.del_node_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_node_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.set_node_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import module 'nodes.filenode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'nodes.filenode.NodeType' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'nodes.filenode.NodeTypeVersions' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'nodes.filenode.new_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'nodes.filenode.open_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'nodes.filenode.read_from_filenode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'nodes.filenode.save_to_filenode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'nodes.filenode.RawPyTablesIO' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'nodes.filenode.RawPyTablesIO.mode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.tell' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.seek' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.seekable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.fileno' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.flush' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.truncate' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.readable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.writable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.readinto' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.readline' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.write' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'nodes.filenode.ROFileNode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'nodes.filenode.ROFileNode.attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.flush' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.read' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.readline' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.readlines' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.seek' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.tell' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.readable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.writable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.seekable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.fileno' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'nodes.filenode.RAFileNode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'nodes.filenode.RAFileNode.attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.flush' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.read' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.readline' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.readlines' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.truncate' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.write' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.writelines' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.seek' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.tell' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.readable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.writable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.seekable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.fileno' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Filters' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Filters.copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'index.Index' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'index.Index.column' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'index.Index.dirty' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'index.Index.filters' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'index.Index.is_csi' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'index.Index.read_sorted' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'index.Index.read_indices' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'index.Index.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'indexes.IndexArray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'misc.enum.Enum' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__call__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__contains__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__eq__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__getattr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__len__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__repr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UnImplemented' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Unknown' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'HDF5ExtError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'ClosedNodeError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'ClosedFileError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'FileModeError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'NodeError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'NoSuchNodeError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'UndoRedoError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'UndoRedoWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'NaturalNameWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'PerformanceWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'FlavorError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'FlavorWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'FiltersWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'OldIndexWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'DataTypeWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'ExperimentalFeatureWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Node._v_parent' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Node._v_attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Node._v_isopen' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Node._v_title' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_isvisible' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_move' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_remove' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_rename' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_delattr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_getattr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_setattr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Group' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Group._v_nchildren' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Group._v_filters' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_copy_children' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_get_child' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_iter_nodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_list_nodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_walk_groups' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_walknodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__contains__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__delattr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__getattr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__repr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__setattr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__str__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Leaf' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.chunkshape' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.ndim' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.filters' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.maindim' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.flavor' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.size_on_disk' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.name' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.object_id' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.title' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.flush' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.isvisible' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.move' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.rename' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.remove' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.get_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.set_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.del_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.truncate' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.__len__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf._f_close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Array' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Array.rowsize' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Array.nrows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.get_enum' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.iterrows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.__next__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.read' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'CArray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'EArray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'EArray.append' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'VLArray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'VLArray.size_on_disk' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'VLArray.size_in_memory' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.append' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.get_enum' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.iterrows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.__next__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.read' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.get_row_size' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'link.Link' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'link.Link._v_attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.Link.copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.Link.move' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.Link.remove' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.Link.rename' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'link.SoftLink' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.SoftLink.__call__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.SoftLink.__str__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'link.ExternalLink' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.ExternalLink.umount' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.ExternalLink.__call__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.ExternalLink.__str__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Table' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Table.autoindex' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Table.colindexes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Table.indexedcolpathnames' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Table.row' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Table.rowsize' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.iterrows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.itersequence' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.itersorted' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.read' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.read_coordinates' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.read_sorted' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.append' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.modify_column' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.modify_columns' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.modify_coordinates' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.modify_rows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.remove_rows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.remove_row' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.get_where_list' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.read_where' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.where' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.append_where' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.will_query_use_indexing' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.flush_rows_to_index' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.get_enum' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.reindex' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.reindex_dirty' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Description' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Description._f_walk' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'tableextension.Row' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.append' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.fetch_all_fields' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.update' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.__contains__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Cols' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Cols._v_table' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Cols._f_col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Cols.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Cols.__len__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Cols.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Column' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.dtype' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.index' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.is_indexed' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.maindim' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.shape' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.table' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.type' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.create_index' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.create_csindex' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.reindex' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.reindex_dirty' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.remove_index' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.__len__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data '__version__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'hdf5_version' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'copy_file' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'is_hdf5_file' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'is_pytables_file' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'open_file' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'set_blosc_max_threads' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'print_versions' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'restrict_flavors' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'split_type' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'test' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'which_lib_version' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'silence_hdf5_messages' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_COLUMNS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_NODE_ATTRS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_GROUP_WIDTH' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_TREE_DEPTH' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_UNDO_PATH_LENGTH' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.CHUNK_CACHE_NELMTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.CHUNK_CACHE_PREEMPT' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.CHUNK_CACHE_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.COND_CACHE_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.METADATA_CACHE_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.NODE_CACHE_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.BOUNDS_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.BOUNDS_MAX_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.ITERSEQ_MAX_ELEMENTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.ITERSEQ_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.ITERSEQ_MAX_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.LIMBOUNDS_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.LIMBOUNDS_MAX_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.TABLE_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.SORTED_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.SORTEDLR_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.SORTEDLR_MAX_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DISABLE_EVERY_CYCLES' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.ENABLE_EVERY_CYCLES' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.LOWEST_HIT_RATIO' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.IO_BUFFER_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.BUFFER_TIMES' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.EXPECTED_ROWS_EARRAY' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.EXPECTED_ROWS_TABLE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.PYTABLES_SYS_ATTRS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_NUMEXPR_THREADS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_BLOSC_THREADS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.USER_BLOCK_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.ALLOW_PADDING' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_DIRECT_ALIGNMENT' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_DIRECT_BLOCK_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_DIRECT_CBUF_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_CORE_INCREMENT' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_CORE_BACKING_STORE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_CORE_IMAGE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_SPLIT_META_EXT' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_SPLIT_RAW_EXT' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... 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[ 98%] usersguide/usersguide writing output... [100%] usersguide/utilities generating indices... genindex writing additional pages... search copying images... [ 3%] images/NumFocusSponsoredStamp.png copying images... [ 6%] usersguide/images/objecttree-h5.png copying images... [ 9%] usersguide/images/objecttree.svg copying images... [ 12%] usersguide/images/create-chunksize-15GB.png copying images... [ 15%] usersguide/images/filesizes-chunksize-15GB.png copying images... [ 18%] usersguide/images/seq-chunksize-15GB.png copying images... [ 21%] usersguide/images/random-chunksize-15GB.png copying images... [ 25%] usersguide/images/Q7-10m-noidx.png copying images... [ 28%] usersguide/images/Q8-1g-noidx.png copying images... [ 31%] usersguide/images/create-index-time-int32-float64.png copying images... [ 34%] usersguide/images/indexes-sizes2.png copying images... [ 37%] usersguide/images/Q8-1g-idx-optlevels.png copying images... 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The HTML pages are in ../../../doc/build/html. cd /<>/.pybuild/cpython3_3.8/build && \ env PYTHONPATH=. python3 -m sphinx -M latexpdf /<>/doc/source /<>/doc/build -N -D today="October 21, 2019" -D html_last_updated_fmt="October 21, 2019" Running Sphinx v1.8.5 making output directory... loading pickled environment... done building [mo]: targets for 0 po files that are out of date building [latex]: all documents updating environment: [] 0 added, 11 changed, 0 removed reading sources... [ 9%] usersguide/libref/declarative_classes reading sources... [ 18%] usersguide/libref/expr_class reading sources... [ 27%] usersguide/libref/file_class reading sources... [ 36%] usersguide/libref/filenode_classes reading sources... [ 45%] usersguide/libref/helper_classes reading sources... [ 54%] usersguide/libref/hierarchy_classes reading sources... [ 63%] usersguide/libref/homogenous_storage reading sources... [ 72%] usersguide/libref/link_classes reading sources... [ 81%] usersguide/libref/structured_storage reading sources... [ 90%] usersguide/libref/top_level reading sources... [100%] usersguide/parameter_files WARNING: autodoc: failed to import class 'Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Atom.ndim' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Atom.recarrtype' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Atom.size' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Atom.copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Atom.from_dtype' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Atom.from_kind' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Atom.from_sctype' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Atom.from_type' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'StringAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'BoolAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'IntAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int8Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int16Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int32Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int64Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UIntAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt8Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt16Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt32Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt64Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'FloatAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Float32Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Float64Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'ComplexAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Time32Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Time64Atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'EnumAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'ObjectAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'VLStringAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'VLUnicodeAtom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Col.from_atom' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'StringCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'BoolCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'IntCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int8Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int16Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int32Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Int64Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UIntCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt8Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt16Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt32Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UInt64Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Float32Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Float64Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'ComplexCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'TimeCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Time32Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Time64Col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'EnumCol' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'IsDescription' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'description.descr_from_dtype' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'description.dtype_from_descr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'attributeset.AttributeSet' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'attributeset.AttributeSet._v_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'attributeset.AttributeSet._f_copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'attributeset.AttributeSet._f_list' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'attributeset.AttributeSet._f_rename' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'attributeset.AttributeSet.__contains__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Expr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Expr.eval' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Expr.set_inputs_range' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Expr.set_output' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Expr.set_output_range' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Expr.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'File' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'File.title' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'File.filters' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'File.open_count' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.copy_file' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.flush' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.fileno' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__enter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__exit__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__str__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__repr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_file_image' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_filesize' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_userblock_size' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.copy_children' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.copy_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_array' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_carray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_earray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_external_link' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_group' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_hard_link' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_soft_link' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_table' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.create_vlarray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.move_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.remove_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.rename_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.is_visible_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.iter_nodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.list_nodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.walk_groups' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.walk_nodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__contains__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.disable_undo' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.enable_undo' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_current_mark' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.goto' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.is_undo_enabled' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.mark' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.redo' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.undo' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.copy_node_attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.del_node_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.get_node_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'File.set_node_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import module 'nodes.filenode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'nodes.filenode.NodeType' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'nodes.filenode.NodeTypeVersions' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'nodes.filenode.new_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'nodes.filenode.open_node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'nodes.filenode.read_from_filenode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'nodes.filenode.save_to_filenode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'nodes.filenode.RawPyTablesIO' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'nodes.filenode.RawPyTablesIO.mode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.tell' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.seek' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.seekable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.fileno' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.flush' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.truncate' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.readable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.writable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.readinto' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.readline' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RawPyTablesIO.write' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'nodes.filenode.ROFileNode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'nodes.filenode.ROFileNode.attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.flush' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.read' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.readline' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.readlines' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.seek' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.tell' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.readable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.writable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.seekable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.ROFileNode.fileno' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'nodes.filenode.RAFileNode' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'nodes.filenode.RAFileNode.attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.flush' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.read' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.readline' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.readlines' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.truncate' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.write' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.writelines' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.seek' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.tell' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.readable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.writable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.seekable' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'nodes.filenode.RAFileNode.fileno' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Filters' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Filters.copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'index.Index' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'index.Index.column' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'index.Index.dirty' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'index.Index.filters' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'index.Index.is_csi' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'index.Index.read_sorted' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'index.Index.read_indices' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'index.Index.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'indexes.IndexArray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'misc.enum.Enum' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__call__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__contains__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__eq__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__getattr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__len__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Enum.__repr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'UnImplemented' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Unknown' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'HDF5ExtError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'ClosedNodeError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'ClosedFileError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'FileModeError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'NodeError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'NoSuchNodeError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'UndoRedoError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'UndoRedoWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'NaturalNameWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'PerformanceWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'FlavorError' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'FlavorWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'FiltersWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'OldIndexWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'DataTypeWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import exception 'ExperimentalFeatureWarning' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Node' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Node._v_parent' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Node._v_attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Node._v_isopen' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Node._v_title' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_isvisible' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_move' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_remove' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_rename' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_delattr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_getattr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Node._f_setattr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Group' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Group._v_nchildren' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Group._v_filters' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_copy_children' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_get_child' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_iter_nodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_list_nodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_walk_groups' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group._f_walknodes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__contains__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__delattr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__getattr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__repr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__setattr__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Group.__str__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Leaf' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.chunkshape' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.ndim' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.filters' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.maindim' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.flavor' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.size_on_disk' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.name' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.object_id' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Leaf.title' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.flush' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.isvisible' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.move' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.rename' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.remove' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.get_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.set_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.del_attr' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.truncate' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf.__len__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Leaf._f_close' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Array' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Array.rowsize' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Array.nrows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.get_enum' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.iterrows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.__next__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.read' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Array.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'CArray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'EArray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'EArray.append' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'VLArray' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'VLArray.size_on_disk' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'VLArray.size_in_memory' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.append' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.get_enum' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.iterrows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.__next__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.read' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.get_row_size' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'VLArray.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'link.Link' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'link.Link._v_attrs' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.Link.copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.Link.move' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.Link.remove' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.Link.rename' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'link.SoftLink' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.SoftLink.__call__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.SoftLink.__str__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'link.ExternalLink' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.ExternalLink.umount' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.ExternalLink.__call__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'link.ExternalLink.__str__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Table' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Table.autoindex' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Table.colindexes' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Table.indexedcolpathnames' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Table.row' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Table.rowsize' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.iterrows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.itersequence' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.itersorted' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.read' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.read_coordinates' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.read_sorted' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.__iter__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.append' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.modify_column' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.modify_columns' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.modify_coordinates' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.modify_rows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.remove_rows' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.remove_row' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.get_where_list' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.read_where' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.where' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.append_where' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.will_query_use_indexing' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.copy' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.flush_rows_to_index' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.get_enum' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.reindex' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Table.reindex_dirty' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Description' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Description._f_walk' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'tableextension.Row' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.append' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.fetch_all_fields' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.update' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.__contains__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'tableextension.Row.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Cols' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Cols._v_table' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Cols._f_col' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Cols.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Cols.__len__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Cols.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import class 'Column' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.dtype' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.index' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.is_indexed' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.maindim' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.shape' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.table' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import attribute 'Column.type' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.create_index' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.create_csindex' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.reindex' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.reindex_dirty' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.remove_index' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.__getitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.__len__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import method 'Column.__setitem__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data '__version__' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'hdf5_version' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'copy_file' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'is_hdf5_file' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'is_pytables_file' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'open_file' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'set_blosc_max_threads' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'print_versions' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'restrict_flavors' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'split_type' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'test' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'which_lib_version' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import function 'silence_hdf5_messages' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_COLUMNS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_NODE_ATTRS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_GROUP_WIDTH' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_TREE_DEPTH' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_UNDO_PATH_LENGTH' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.CHUNK_CACHE_NELMTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.CHUNK_CACHE_PREEMPT' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.CHUNK_CACHE_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.COND_CACHE_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.METADATA_CACHE_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.NODE_CACHE_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.BOUNDS_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.BOUNDS_MAX_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.ITERSEQ_MAX_ELEMENTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.ITERSEQ_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.ITERSEQ_MAX_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.LIMBOUNDS_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.LIMBOUNDS_MAX_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.TABLE_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.SORTED_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.SORTEDLR_MAX_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.SORTEDLR_MAX_SLOTS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DISABLE_EVERY_CYCLES' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.ENABLE_EVERY_CYCLES' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.LOWEST_HIT_RATIO' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.IO_BUFFER_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.BUFFER_TIMES' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.EXPECTED_ROWS_EARRAY' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.EXPECTED_ROWS_TABLE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.PYTABLES_SYS_ATTRS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_NUMEXPR_THREADS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.MAX_BLOSC_THREADS' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.USER_BLOCK_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.ALLOW_PADDING' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_DIRECT_ALIGNMENT' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_DIRECT_BLOCK_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_DIRECT_CBUF_SIZE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_CORE_INCREMENT' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_CORE_BACKING_STORE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_CORE_IMAGE' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_SPLIT_META_EXT' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' WARNING: autodoc: failed to import data 'parameters.DRIVER_SPLIT_RAW_EXT' from module 'tables'; the following exception was raised: No module named 'tables.utilsextension' looking for now-outdated files... none found pickling environment... done checking consistency... done processing usersguide-3.5.2.tex...usersguide/usersguide usersguide/introduction usersguide/installation usersguide/tutorials usersguide/libref usersguide/libref/top_level usersguide/libref/file_class usersguide/libref/hierarchy_classes usersguide/libref/structured_storage usersguide/libref/homogenous_storage usersguide/libref/link_classes usersguide/libref/declarative_classes usersguide/libref/helper_classes usersguide/libref/expr_class usersguide/libref/filenode_classes usersguide/optimization usersguide/filenode usersguide/datatypes usersguide/condition_syntax usersguide/parameter_files usersguide/utilities usersguide/file_format usersguide/bibliography resolving references... writing... done copying images... 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Rerun to get cross-references right. ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on usersguide-3.5.2.pdf (129 pages, 2197915 bytes). Transcript written on usersguide-3.5.2.log. Latexmk: Index file 'usersguide-3.5.2.idx' was written Latexmk: Missing input file: 'usersguide-3.5.2.ind' from line 'No file usersguide-3.5.2.ind.' Latexmk: References changed. Latexmk: Log file says output to 'usersguide-3.5.2.pdf' Rule 'makeindex usersguide-3.5.2.idx': File changes, etc: Changed files, or newly in use since previous run(s): 'usersguide-3.5.2.idx' ------------ Run number 1 of rule 'makeindex usersguide-3.5.2.idx' ------------ ------------ Running 'makeindex -s python.ist -o "usersguide-3.5.2.ind" "usersguide-3.5.2.idx"' ------------ === TeX engine is 'pdfTeX' Latexmk: applying rule 'makeindex usersguide-3.5.2.idx'... This is makeindex, version 2.15 [TeX Live 2019] (kpathsea + Thai support). 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[99] [100] Chapter 2. [101] [102] [103] [104] [105] [106] Chapter 3. 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Transcript written on usersguide-3.5.2.log. Latexmk: Index file 'usersguide-3.5.2.idx' was written Latexmk: Log file says output to 'usersguide-3.5.2.pdf' Rule 'pdflatex': File changes, etc: Changed files, or newly in use since previous run(s): 'usersguide-3.5.2.aux' 'usersguide-3.5.2.lof' 'usersguide-3.5.2.lot' 'usersguide-3.5.2.toc' ------------ Run number 3 of rule 'pdflatex' ------------ ------------ Running 'pdflatex -recorder "usersguide-3.5.2.tex"' ------------ === TeX engine is 'pdfTeX' Latexmk: applying rule 'pdflatex'... 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[99] [100] Chapter 2. [101] [102] [103] [104] [105] [106] Chapter 3. 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Transcript written on usersguide-3.5.2.log. Latexmk: Index file 'usersguide-3.5.2.idx' was written Latexmk: Log file says output to 'usersguide-3.5.2.pdf' === TeX engine is 'pdfTeX' Latexmk: All targets () are up-to-date make[2]: Leaving directory '/<>/doc/build/latex' mv doc/build/html doc/html mv doc/build/latex/usersguide-*.pdf doc/usersguide.pdf make[1]: Leaving directory '/<>' dh_auto_test -a -O--buildsystem=pybuild I: pybuild base:217: python2.7 setup.py test /tmp/lzo_version_dateS8fa7O.c: In function ‘main’: /tmp/lzo_version_dateS8fa7O.c:2:5: warning: implicit declaration of function ‘lzo_version_date’ [-Wimplicit-function-declaration] 2 | lzo_version_date(); | ^~~~~~~~~~~~~~~~ /tmp/BZ2_bzlibVersionvtxnDP.c: In function ‘main’: /tmp/BZ2_bzlibVersionvtxnDP.c:2:5: warning: implicit declaration of function ‘BZ2_bzlibVersion’ [-Wimplicit-function-declaration] 2 | BZ2_bzlibVersion(); | ^~~~~~~~~~~~~~~~ /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'extra_require' warnings.warn(msg) * Using Python 2.7.17 (default, Oct 19 2019, 23:36:22) * USE_PKGCONFIG: False * Found HDF5 headers at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/include``, library at ``/usr/lib/arm-linux-gnueabihf/hdf5/serial/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/usr/include``, the library is located in the standard system search dirs. * Found blosc headers at ``/usr/include``, library at ``/usr/lib``. running test running egg_info creating tables.egg-info writing requirements to tables.egg-info/requires.txt writing tables.egg-info/PKG-INFO writing top-level names to tables.egg-info/top_level.txt writing dependency_links to tables.egg-info/dependency_links.txt writing entry points to tables.egg-info/entry_points.txt writing manifest file 'tables.egg-info/SOURCES.txt' reading manifest file 'tables.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.conf' under directory 'doc' warning: no files found matching '*.*_t' under directory 'doc' warning: no files found matching '*' under directory 'doc/sphinxext' warning: no files found matching '*.h5' under directory 'bench' writing manifest file 'tables.egg-info/SOURCES.txt' running build_ext copying /<>/.pybuild/cpython2_2.7/build/tables/utilsextension.so -> tables copying /<>/.pybuild/cpython2_2.7/build/tables/hdf5extension.so -> tables copying /<>/.pybuild/cpython2_2.7/build/tables/tableextension.so -> tables copying /<>/.pybuild/cpython2_2.7/build/tables/_comp_lzo.so -> tables copying /<>/.pybuild/cpython2_2.7/build/tables/_comp_bzip2.so -> tables copying /<>/.pybuild/cpython2_2.7/build/tables/linkextension.so -> tables copying /<>/.pybuild/cpython2_2.7/build/tables/lrucacheextension.so -> tables copying /<>/.pybuild/cpython2_2.7/build/tables/indexesextension.so -> tables Traceback (most recent call last): File "setup.py", line 1063, in **setuptools_kwargs File "/usr/lib/python2.7/dist-packages/setuptools/__init__.py", line 145, in setup return distutils.core.setup(**attrs) File "/usr/lib/python2.7/distutils/core.py", line 151, in setup dist.run_commands() File "/usr/lib/python2.7/distutils/dist.py", line 953, in run_commands self.run_command(cmd) File "/usr/lib/python2.7/distutils/dist.py", line 972, in run_command cmd_obj.run() File "/usr/lib/python2.7/dist-packages/setuptools/command/test.py", line 229, in run self.run_tests() File "/usr/lib/python2.7/dist-packages/setuptools/command/test.py", line 251, in run_tests exit=False, File "/usr/lib/python2.7/unittest/main.py", line 94, in __init__ self.parseArgs(argv) File "/usr/lib/python2.7/unittest/main.py", line 149, in parseArgs self.createTests() File "/usr/lib/python2.7/unittest/main.py", line 158, in createTests self.module) File "/usr/lib/python2.7/unittest/loader.py", line 130, in loadTestsFromNames suites = [self.loadTestsFromName(name, module) for name in names] File "/usr/lib/python2.7/unittest/loader.py", line 91, in loadTestsFromName module = __import__('.'.join(parts_copy)) File "/<>/tables/__init__.py", line 131, in from .file import File, open_file, copy_file File "/<>/tables/file.py", line 35, in from . import hdf5extension ImportError: cannot import name hdf5extension E: pybuild pybuild:341: test: plugin distutils failed with: exit code=1: python2.7 setup.py test dh_auto_test: pybuild --test -i python{version} -p 2.7 returned exit code 13 make: *** [debian/rules:24: build-arch] Error 255 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20191021-1007 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build-Space: 201652 Build-Time: 1246 Distribution: focal-proposed Fail-Stage: build Host Architecture: armhf Install-Time: 194 Job: pytables_3.5.2-3ubuntu1.dsc Machine Architecture: arm64 Package: pytables Package-Time: 1442 Source-Version: 3.5.2-3ubuntu1 Space: 201652 Status: attempted Version: 3.5.2-3ubuntu1 -------------------------------------------------------------------------------- Finished at 20191021-1007 Build needed 00:24:02, 201652k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-17942970 Scanning for processes to kill in build PACKAGEBUILD-17942970