RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux lgw01-27 3.19.0-31-generic #36~14.04.1-Ubuntu SMP Thu Oct 8 10:21:08 UTC 2015 x86_64 Buildd toolchain package versions: launchpad-buildd_134 python-lpbuildd_134 sbuild_0.65.2-1ubuntu2~ubuntu14.04.1~ppa6 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.04.1 bzr_2.6.0+bzr6593-1ubuntu1.1 dpkg-dev_1.17.5ubuntu5.4 python-debian_0.1.27ubuntu1~ubuntu14.04.1~ppa1. Syncing the system clock with the buildd NTP service... 27 Oct 23:13:08 ntpdate[1647]: adjust time server 10.211.37.1 offset 0.002548 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-8198901', '/home/buildd/filecache-default/8204889cda79fca0b488b979ea0c52fb9d6dbd17'] Unpacking chroot for build PACKAGEBUILD-8198901 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-8198901'] Mounting chroot for build PACKAGEBUILD-8198901 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-8198901', 'deb http://ftpmaster.internal/ubuntu xenial main universe', 'deb http://ftpmaster.internal/ubuntu xenial-security main universe', 'deb http://ftpmaster.internal/ubuntu xenial-updates main universe', 'deb http://ftpmaster.internal/ubuntu xenial-proposed main universe'] Overriding sources.list in build-PACKAGEBUILD-8198901 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-8198901', 'amd64'] Updating debian chroot for build PACKAGEBUILD-8198901 Get:1 http://ftpmaster.internal xenial InRelease [218 kB] Get:2 http://ftpmaster.internal xenial-security InRelease [64.4 kB] Get:3 http://ftpmaster.internal xenial-updates InRelease [64.4 kB] Get:4 http://ftpmaster.internal xenial-proposed InRelease [64.4 kB] Get:5 http://ftpmaster.internal xenial/main amd64 Packages [1425 kB] Get:6 http://ftpmaster.internal xenial/universe amd64 Packages [6878 kB] Get:7 http://ftpmaster.internal xenial/main Translation-en [839 kB] Get:8 http://ftpmaster.internal xenial/universe Translation-en [4691 kB] Get:9 http://ftpmaster.internal xenial-security/main amd64 Packages [28 B] Get:10 http://ftpmaster.internal xenial-security/universe amd64 Packages [28 B] Get:11 http://ftpmaster.internal xenial-security/main Translation-en [28 B] Get:12 http://ftpmaster.internal xenial-security/universe Translation-en [28 B] Get:13 http://ftpmaster.internal xenial-updates/main amd64 Packages [28 B] Get:14 http://ftpmaster.internal xenial-updates/universe amd64 Packages [28 B] Get:15 http://ftpmaster.internal xenial-updates/main Translation-en [28 B] Get:16 http://ftpmaster.internal xenial-updates/universe Translation-en [28 B] Get:17 http://ftpmaster.internal xenial-proposed/main amd64 Packages [50.8 kB] Get:18 http://ftpmaster.internal xenial-proposed/universe amd64 Packages [219 kB] Get:19 http://ftpmaster.internal xenial-proposed/main Translation-en [27.3 kB] Get:20 http://ftpmaster.internal xenial-proposed/universe Translation-en [124 kB] Fetched 14.7 MB in 8s (1737 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: advancecomp base-files binutils bsdutils cpp-5 diffutils dpkg dpkg-dev g++-5 gcc-5 gcc-5-base init libasan2 libatomic1 libblkid1 libcap2 libcap2-bin libcc1-0 libcilkrts5 libdpkg-perl libfdisk1 libgcc-5-dev libgcc1 libgomp1 libgpg-error0 libgssapi-krb5-2 libitm1 libk5crypto3 libkrb5-3 libkrb5support0 liblsan0 libmount1 libmpx0 libquadmath0 libsmartcols1 libsqlite3-0 libstdc++-5-dev libstdc++6 libtasn1-6 libtsan0 libubsan0 libuuid1 mount pkg-create-dbgsym util-linux 45 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 103 MB of archives. After this operation, 326 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ xenial/main base-files amd64 9.4ubuntu2 [62.2 kB] Get:2 http://ftpmaster.internal/ubuntu/ xenial/main bsdutils amd64 1:2.27-3ubuntu1 [52.1 kB] Get:3 http://ftpmaster.internal/ubuntu/ xenial/main diffutils amd64 1:3.3-2 [156 kB] Get:4 http://ftpmaster.internal/ubuntu/ xenial-proposed/main dpkg amd64 1.18.3ubuntu1 [2081 kB] Get:5 http://ftpmaster.internal/ubuntu/ xenial/main init amd64 1.24ubuntu1 [4006 B] Get:6 http://ftpmaster.internal/ubuntu/ xenial/main libsmartcols1 amd64 2.27-3ubuntu1 [63.3 kB] Get:7 http://ftpmaster.internal/ubuntu/ xenial/main libuuid1 amd64 2.27-3ubuntu1 [15.8 kB] Get:8 http://ftpmaster.internal/ubuntu/ xenial/main libblkid1 amd64 2.27-3ubuntu1 [107 kB] Get:9 http://ftpmaster.internal/ubuntu/ xenial/main libfdisk1 amd64 2.27-3ubuntu1 [139 kB] Get:10 http://ftpmaster.internal/ubuntu/ xenial/main util-linux amd64 2.27-3ubuntu1 [848 kB] Get:11 http://ftpmaster.internal/ubuntu/ xenial/main mount amd64 2.27-3ubuntu1 [121 kB] Get:12 http://ftpmaster.internal/ubuntu/ xenial/main libgomp1 amd64 5.2.1-22ubuntu5 [55.0 kB] Get:13 http://ftpmaster.internal/ubuntu/ xenial/main libitm1 amd64 5.2.1-22ubuntu5 [27.4 kB] Get:14 http://ftpmaster.internal/ubuntu/ xenial/main libatomic1 amd64 5.2.1-22ubuntu5 [8880 B] Get:15 http://ftpmaster.internal/ubuntu/ xenial/main libasan2 amd64 5.2.1-22ubuntu5 [269 kB] Get:16 http://ftpmaster.internal/ubuntu/ xenial/main liblsan0 amd64 5.2.1-22ubuntu5 [110 kB] Get:17 http://ftpmaster.internal/ubuntu/ xenial/main libtsan0 amd64 5.2.1-22ubuntu5 [249 kB] Get:18 http://ftpmaster.internal/ubuntu/ xenial/main libubsan0 amd64 5.2.1-22ubuntu5 [100 kB] Get:19 http://ftpmaster.internal/ubuntu/ xenial/main libcilkrts5 amd64 5.2.1-22ubuntu5 [40.1 kB] Get:20 http://ftpmaster.internal/ubuntu/ xenial/main libmpx0 amd64 5.2.1-22ubuntu5 [9764 B] Get:21 http://ftpmaster.internal/ubuntu/ xenial/main libquadmath0 amd64 5.2.1-22ubuntu5 [131 kB] Get:22 http://ftpmaster.internal/ubuntu/ xenial/main cpp-5 amd64 5.2.1-22ubuntu5 [26.4 MB] Get:23 http://ftpmaster.internal/ubuntu/ xenial/main libcc1-0 amd64 5.2.1-22ubuntu5 [30.9 kB] Get:24 http://ftpmaster.internal/ubuntu/ xenial/main binutils amd64 2.25.51.20151027-0ubuntu1 [2311 kB] Get:25 http://ftpmaster.internal/ubuntu/ xenial/main g++-5 amd64 5.2.1-22ubuntu5 [37.0 MB] Get:26 http://ftpmaster.internal/ubuntu/ xenial/main gcc-5 amd64 5.2.1-22ubuntu5 [26.6 MB] Get:27 http://ftpmaster.internal/ubuntu/ xenial/main libgcc-5-dev amd64 5.2.1-22ubuntu5 [2248 kB] Get:28 http://ftpmaster.internal/ubuntu/ xenial/main gcc-5-base amd64 5.2.1-22ubuntu5 [16.4 kB] Get:29 http://ftpmaster.internal/ubuntu/ xenial/main libstdc++6 amd64 5.2.1-22ubuntu5 [393 kB] Get:30 http://ftpmaster.internal/ubuntu/ xenial/main libstdc++-5-dev amd64 5.2.1-22ubuntu5 [1422 kB] Get:31 http://ftpmaster.internal/ubuntu/ xenial/main libgcc1 amd64 1:5.2.1-22ubuntu5 [38.7 kB] Get:32 http://ftpmaster.internal/ubuntu/ xenial/main libcap2 amd64 1:2.24-12 [12.9 kB] Get:33 http://ftpmaster.internal/ubuntu/ xenial/main libcap2-bin amd64 1:2.24-12 [20.2 kB] Get:34 http://ftpmaster.internal/ubuntu/ xenial/main libgpg-error0 amd64 1.20-1 [32.8 kB] Get:35 http://ftpmaster.internal/ubuntu/ xenial/main libmount1 amd64 2.27-3ubuntu1 [115 kB] Get:36 http://ftpmaster.internal/ubuntu/ xenial-proposed/main libdpkg-perl all 1.18.3ubuntu1 [195 kB] Get:37 http://ftpmaster.internal/ubuntu/ xenial-proposed/main dpkg-dev all 1.18.3ubuntu1 [583 kB] Get:38 http://ftpmaster.internal/ubuntu/ xenial/main libsqlite3-0 amd64 3.9.1-2 [395 kB] Get:39 http://ftpmaster.internal/ubuntu/ xenial/main libtasn1-6 amd64 4.7-2 [43.1 kB] Get:40 http://ftpmaster.internal/ubuntu/ xenial-proposed/main libgssapi-krb5-2 amd64 1.13.2+dfsg-3 [119 kB] Get:41 http://ftpmaster.internal/ubuntu/ xenial-proposed/main libkrb5-3 amd64 1.13.2+dfsg-3 [273 kB] Get:42 http://ftpmaster.internal/ubuntu/ xenial-proposed/main libkrb5support0 amd64 1.13.2+dfsg-3 [30.2 kB] Get:43 http://ftpmaster.internal/ubuntu/ xenial-proposed/main libk5crypto3 amd64 1.13.2+dfsg-3 [81.3 kB] Get:44 http://ftpmaster.internal/ubuntu/ xenial/main advancecomp amd64 1.20-1 [160 kB] Get:45 http://ftpmaster.internal/ubuntu/ xenial/main pkg-create-dbgsym all 0.70 [9046 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 103 MB in 59s (1743 kB/s) (Reading database ... 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Updating /etc/profile to current default. Updating /etc/nsswitch.conf to current default. Updating /root/.profile to current default. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11692 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.27-3ubuntu1_amd64.deb ... Unpacking bsdutils (1:2.27-3ubuntu1) over (1:2.26.2-6ubuntu3) ... Setting up bsdutils (1:2.27-3ubuntu1) ... (Reading database ... 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Setting up gcc-5-base:amd64 (5.2.1-22ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11719 files and directories currently installed.) Preparing to unpack .../libstdc++6_5.2.1-22ubuntu5_amd64.deb ... Unpacking libstdc++6:amd64 (5.2.1-22ubuntu5) over (5.2.1-22ubuntu2) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... Setting up libstdc++6:amd64 (5.2.1-22ubuntu5) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... (Reading database ... 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Processing triggers for libc-bin (2.21-0ubuntu4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11719 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.24-12_amd64.deb ... Unpacking libcap2:amd64 (1:2.24-12) over (1:2.24-9) ... Setting up libcap2:amd64 (1:2.24-12) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... (Reading database ... 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Setting up libitm1:amd64 (5.2.1-22ubuntu5) ... Setting up libatomic1:amd64 (5.2.1-22ubuntu5) ... Setting up libasan2:amd64 (5.2.1-22ubuntu5) ... Setting up liblsan0:amd64 (5.2.1-22ubuntu5) ... Setting up libtsan0:amd64 (5.2.1-22ubuntu5) ... Setting up libubsan0:amd64 (5.2.1-22ubuntu5) ... Setting up libcilkrts5:amd64 (5.2.1-22ubuntu5) ... Setting up libmpx0:amd64 (5.2.1-22ubuntu5) ... Setting up libquadmath0:amd64 (5.2.1-22ubuntu5) ... Setting up cpp-5 (5.2.1-22ubuntu5) ... Setting up libcc1-0:amd64 (5.2.1-22ubuntu5) ... Setting up binutils (2.25.51.20151027-0ubuntu1) ... Setting up libgcc-5-dev:amd64 (5.2.1-22ubuntu5) ... Setting up gcc-5 (5.2.1-22ubuntu5) ... Setting up libstdc++-5-dev:amd64 (5.2.1-22ubuntu5) ... Setting up g++-5 (5.2.1-22ubuntu5) ... Setting up libdpkg-perl (1.18.3ubuntu1) ... Setting up dpkg-dev (1.18.3ubuntu1) ... Setting up libsqlite3-0:amd64 (3.9.1-2) ... Setting up libtasn1-6:amd64 (4.7-2) ... Setting up libkrb5support0:amd64 (1.13.2+dfsg-3) ... Setting up libk5crypto3:amd64 (1.13.2+dfsg-3) ... Setting up libkrb5-3:amd64 (1.13.2+dfsg-3) ... Setting up libgssapi-krb5-2:amd64 (1.13.2+dfsg-3) ... Setting up advancecomp (1.20-1) ... Setting up pkg-create-dbgsym (0.70) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-8198901', 'amd64', 'xenial-proposed', '-c', 'chroot:autobuild', '--arch=amd64', '--dist=xenial-proposed', '--purge=never', '--nolog', '-A', 'python-biom-format_2.1.4+dfsg-1.dsc'] Initiating build PACKAGEBUILD-8198901 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 3.19.0-31-generic #36~14.04.1-Ubuntu SMP Thu Oct 8 10:21:08 UTC 2015 x86_64 sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on lgw01-27.buildd ╔══════════════════════════════════════════════════════════════════════════════╗ ║ python-biom-format 2.1.4+dfsg-1 (amd64) 27 Oct 2015 23:14 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: python-biom-format Version: 2.1.4+dfsg-1 Source Version: 2.1.4+dfsg-1 Distribution: xenial-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/python-biom-format-hSBXkR/python-biom-format-2.1.4+dfsg' with '«PKGBUILDDIR»' I: NOTICE: Log filtering will replace 'build/python-biom-format-hSBXkR' with '«BUILDDIR»' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-8198901/chroot-autobuild' with '«CHROOT»' ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Local sources ───────────── python-biom-format_2.1.4+dfsg-1.dsc exists in .; copying to chroot Check architectures ─────────────────── Check dependencies ────────────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/«BUILDDIR»/resolver-974zVz/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign file: ./ InRelease Ign file: ./ Release.gpg Get:1 file: ./ Release [2119 B] Ign file: ./ Translation-en Reading package lists... Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/770 B of archives. After this operation, 0 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! sbuild-build-depends-core-dummy debconf: delaying package configuration, since apt-utils is not installed Authentication warning overridden. Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11719 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, init, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:5.2), g++ (>= 4:5.2), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), dh-python, dh-linktree, cython, python-dev, python-numpy, python-scipy, python-h5py, help2man, python-cogent, pyqi, python-future, python-nose, python-tox, python-sphinx, python-setuptools, bash-completion Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, init, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:5.2), g++ (>= 4:5.2), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), dh-python, dh-linktree, cython, python-dev, python-numpy, python-scipy, python-h5py, help2man, python-cogent, pyqi, python-future, python-nose, python-tox, python-sphinx, python-setuptools, bash-completion dpkg-deb: building package 'sbuild-build-depends-python-biom-format-dummy' in '/«BUILDDIR»/resolver-LKpF2T/apt_archive/sbuild-build-depends-python-biom-format-dummy.deb'. Ign file: ./ InRelease Ign file: ./ Release.gpg Get:1 file: ./ Release [2119 B] Ign file: ./ Translation-en Reading package lists... Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install python-biom-format build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bash-completion bsdmainutils cython debhelper dh-linktree dh-python docutils-common file fonts-font-awesome fonts-lato gettext gettext-base groff-base help2man intltool-debian libasprintf0v5 libblas-common libblas3 libcroco3 libexpat1 libexpat1-dev libgfortran3 libglib2.0-0 libhdf5-10 libicu55 libjs-jquery libjs-modernizr libjs-sphinxdoc libjs-underscore liblapack3 liblocale-gettext-perl libmagic1 libmpdec2 libpipeline1 libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib libunistring0 libxml2 man-db mime-support po-debconf pyqi python python-alabaster python-babel python-babel-localedata python-chardet-whl python-cogent python-colorama-whl python-decorator python-dev python-distlib-whl python-docutils python-future python-h5py python-html5lib-whl python-jinja2 python-markupsafe python-minimal python-nose python-numpy python-pip-whl python-pkg-resources python-pygments python-requests-whl python-roman python-scipy python-setuptools python-setuptools-whl python-six python-six-whl python-sphinx python-sphinx-rtd-theme python-tox python-tz python-urllib3-whl python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3-pkg-resources python3-pluggy python3-py python3-setuptools python3-virtualenv python3.5 python3.5-minimal sgml-base sphinx-common sphinx-rtd-theme-common tox virtualenv xml-core Suggested packages: wamerican wordlist whois vacation cython-doc dh-make gettext-doc groff javascript-common less www-browser libmail-box-perl python-doc python-tk python-cogent-doc cd-hit parsinsert texlive-latex-recommended texlive-latex-base texlive-lang-french fonts-linuxlibertine ttf-linux-libertine python-future-doc python-jinja2-doc python-coverage python-nose-doc gfortran python-numpy-dbg python-numpy-doc ttf-bitstream-vera python-scipy-doc python-setuptools-doc libjs-mathjax dvipng texlive-latex-extra texlive-fonts-recommended python2.7-doc binfmt-support python3-doc python3-tk python3-venv subversion python3-pytest python3.5-venv python3.5-doc sgml-base-doc Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info xdg-user-dirs libmail-sendmail-perl python-pil libpaper-utils docutils-doc python-chardet python-imaging sphinx-doc The following NEW packages will be installed: bash-completion bsdmainutils cython debhelper dh-linktree dh-python docutils-common file fonts-font-awesome fonts-lato gettext gettext-base groff-base help2man intltool-debian libasprintf0v5 libblas-common libblas3 libcroco3 libexpat1 libexpat1-dev libgfortran3 libglib2.0-0 libhdf5-10 libicu55 libjs-jquery libjs-modernizr libjs-sphinxdoc libjs-underscore liblapack3 liblocale-gettext-perl libmagic1 libmpdec2 libpipeline1 libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib libunistring0 libxml2 man-db mime-support po-debconf pyqi python python-alabaster python-babel python-babel-localedata python-chardet-whl python-cogent python-colorama-whl python-decorator python-dev python-distlib-whl python-docutils python-future python-h5py python-html5lib-whl python-jinja2 python-markupsafe python-minimal python-nose python-numpy python-pip-whl python-pkg-resources python-pygments python-requests-whl python-roman python-scipy python-setuptools python-setuptools-whl python-six python-six-whl python-sphinx python-sphinx-rtd-theme python-tox python-tz python-urllib3-whl python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3-pkg-resources python3-pluggy python3-py python3-setuptools python3-virtualenv python3.5 python3.5-minimal sbuild-build-depends-python-biom-format-dummy sgml-base sphinx-common sphinx-rtd-theme-common tox virtualenv xml-core 0 upgraded, 102 newly installed, 0 to remove and 0 not upgraded. Need to get 78.2 MB/78.3 MB of archives. After this operation, 257 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! sbuild-build-depends-python-biom-format-dummy Authentication warning overridden. 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xenial/main python3-setuptools all 18.4-2 [89.1 kB] Get:96 http://ftpmaster.internal/ubuntu/ xenial/universe python3-virtualenv all 1.11.6+ds-1 [50.2 kB] Get:97 http://ftpmaster.internal/ubuntu/ xenial/universe virtualenv all 1.11.6+ds-1 [4396 B] Get:98 http://ftpmaster.internal/ubuntu/ xenial/universe tox all 2.1.1-2 [131 kB] Get:99 http://ftpmaster.internal/ubuntu/ xenial/universe python-tox all 2.1.1-2 [5956 B] Get:100 http://ftpmaster.internal/ubuntu/ xenial-proposed/universe python-cogent amd64 1.5.3-3 [938 kB] Get:101 http://ftpmaster.internal/ubuntu/ xenial-proposed/universe python-scipy amd64 0.16.1-1 [8743 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 78.2 MB in 20s (3799 kB/s) Selecting previously unselected package liblocale-gettext-perl. 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Setting up bash-completion (1:2.1-4.1ubuntu2) ... Setting up libasprintf0v5:amd64 (0.19.4-1ubuntu3) ... Setting up groff-base (1.22.3-1) ... Setting up bsdmainutils (9.0.6ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libpipeline1:amd64 (1.4.1-1) ... Setting up man-db (2.7.4-1) ... Not building database; man-db/auto-update is not 'true'. Setting up sgml-base (1.26+nmu4ubuntu1) ... Setting up fonts-lato (2.0-1) ... Setting up libglib2.0-0:amd64 (2.46.1-1) ... No schema files found: doing nothing. Setting up libicu55:amd64 (55.1-4ubuntu1) ... Setting up libxml2:amd64 (2.9.2+zdfsg1-4) ... Setting up libcroco3:amd64 (0.6.8-3) ... Setting up libunistring0:amd64 (0.9.3-5.2ubuntu1) ... Setting up libpython2.7-stdlib:amd64 (2.7.10-4ubuntu1) ... Setting up python2.7 (2.7.10-4ubuntu1) ... Setting up libpython-stdlib:amd64 (2.7.9-1) ... 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Setting up python-docutils (0.12+dfsg-1) ... update-alternatives: using /usr/share/docutils/scripts/python2/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python-alabaster (0.7.6-1) ... Setting up python-sphinx (1.3.1-7ubuntu2) ... Setting up python3 (3.5.0-2) ... Setting up python3-pkg-resources (18.4-2) ... Setting up python-chardet-whl (2.3.0-1build1) ... Setting up python-pip-whl (1.5.6-7ubuntu1) ... Setting up python3-pluggy (0.3.0-1) ... Setting up python3-py (1.4.30-2) ... Setting up python3-setuptools (18.4-2) ... Setting up python3-virtualenv (1.11.6+ds-1) ... Setting up virtualenv (1.11.6+ds-1) ... Setting up tox (2.1.1-2) ... Setting up python-tox (2.1.1-2) ... Setting up dh-python (2.20150826ubuntu1) ... Setting up sbuild-build-depends-python-biom-format-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.21-0ubuntu4) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 3.19.0-31-generic amd64 (x86_64) Toolchain package versions: binutils_2.25.51.20151027-0ubuntu1 dpkg-dev_1.18.3ubuntu1 g++-5_5.2.1-22ubuntu5 gcc-5_5.2.1-22ubuntu5 libc6-dev_2.21-0ubuntu4 libstdc++-5-dev_5.2.1-22ubuntu5 libstdc++6_5.2.1-22ubuntu5 linux-libc-dev_4.2.0-16.19 Package versions: adduser_3.113+nmu3ubuntu4 advancecomp_1.20-1 apt_1.0.10.2ubuntu1 apt-transport-https_1.0.10.2ubuntu1 base-files_9.4ubuntu2 base-passwd_3.5.38 bash_4.3-14ubuntu1 bash-completion_1:2.1-4.1ubuntu2 binutils_2.25.51.20151027-0ubuntu1 bsdmainutils_9.0.6ubuntu1 bsdutils_1:2.27-3ubuntu1 build-essential_12.1ubuntu2 bzip2_1.0.6-8 ca-certificates_20150426ubuntu1 coreutils_8.23-4ubuntu2 cpp_4:5.2.1-3ubuntu1 cpp-5_5.2.1-22ubuntu5 cython_0.23.3-0ubuntu1 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python2.7_2.7.10-4ubuntu1 python2.7-dev_2.7.10-4ubuntu1 python2.7-minimal_2.7.10-4ubuntu1 python3_3.5.0-2 python3-minimal_3.5.0-2 python3-pkg-resources_18.4-2 python3-pluggy_0.3.0-1 python3-py_1.4.30-2 python3-setuptools_18.4-2 python3-virtualenv_1.11.6+ds-1 python3.5_3.5.0-3 python3.5-minimal_3.5.0-3 readline-common_6.3-8ubuntu1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-biom-format-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 sgml-base_1.26+nmu4ubuntu1 sphinx-common_1.3.1-7ubuntu2 sphinx-rtd-theme-common_0.1.9-1 systemd_225-1ubuntu9 systemd-sysv_225-1ubuntu9 sysv-rc_2.88dsf-59.2ubuntu2 sysvinit-utils_2.88dsf-59.2ubuntu2 tar_1.27.1-2 tox_2.1.1-2 tzdata_2015g-1 ubuntu-keyring_2012.05.19 udev_225-1ubuntu9 util-linux_2.27-3ubuntu1 virtualenv_1.11.6+ds-1 xml-core_0.13+nmu2 xz-utils_5.1.1alpha+20120614-2ubuntu2 zlib1g_1:1.2.8.dfsg-2ubuntu4 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: Signature made Tue Oct 27 17:48:18 2015 UTC using RSA key ID D1C646D1 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./python-biom-format_2.1.4+dfsg-1.dsc dpkg-source: info: extracting python-biom-format in python-biom-format-2.1.4+dfsg dpkg-source: info: unpacking python-biom-format_2.1.4+dfsg.orig.tar.xz dpkg-source: info: unpacking python-biom-format_2.1.4+dfsg-1.debian.tar.xz dpkg-source: info: applying ignore_local_dist-packages.patch dpkg-source: info: applying no-web-adds.patch dpkg-source: info: applying fix_future_import.patch dpkg-source: info: applying enable_sloppy_sphinx_build.patch Check disc space ──────────────── Sufficient free space for build User Environment ──────────────── DEB_BUILD_OPTIONS=parallel=4 HOME=/home/buildd LANG=C LOGNAME=buildd MAIL=/var/mail/buildd OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games PWD=/«BUILDDIR»/python-biom-format-2.1.4+dfsg SHELL=/bin/sh SUDO_COMMAND=/usr/sbin/chroot /«CHROOT» su buildd -s /bin/sh -c cd '/«BUILDDIR»/python-biom-format-2.1.4+dfsg' && 'env' SUDO_GID=2501 SUDO_UID=2001 SUDO_USER=buildd TERM=unknown USER=buildd USERNAME=root dpkg-buildpackage ───────────────── dpkg-buildpackage: source package python-biom-format dpkg-buildpackage: source version 2.1.4+dfsg-1 dpkg-buildpackage: source distribution unstable dpkg-source --before-build python-biom-format-2.1.4+dfsg dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean dh clean --with python2 --buildsystem=pybuild --with linktree dh_testdir -O--buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg' rm -rf build/tests dh_auto_clean I: pybuild base:170: python2.7 setup.py clean running clean removing '/«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it find -name "._*" -delete #Remove any Mac metadata files make --directory=doc clean make[2]: Entering directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc' rm -rf _build/* documentation/generated make[2]: Leaving directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc' rm -f debian/bash-completion rm -f python-code/support-code/_*.cpp make[1]: Leaving directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg' dh_clean -O--buildsystem=pybuild debian/rules build dh build --with python2 --buildsystem=pybuild --with linktree dh_testdir -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:170: python2.7 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg' USE_CYTHON=true dh_auto_build I: pybuild base:170: /usr/bin/python setup.py build Compiling biom/_filter.pyx because it changed. Compiling biom/_transform.pyx because it changed. Compiling biom/_subsample.pyx because it changed. [1/3] Cythonizing biom/_filter.pyx [2/3] Cythonizing biom/_subsample.pyx [3/3] Cythonizing biom/_transform.pyx running build running build_py creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom copying biom/util.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom copying biom/err.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom copying biom/exception.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom copying biom/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom copying biom/table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom copying biom/parse.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands copying biom/commands/table_subsetter.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands copying biom/commands/table_validator.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands copying biom/commands/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands copying biom/commands/installation_informer.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands copying biom/commands/table_converter.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands copying biom/commands/metadata_adder.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands copying biom/commands/table_normalizer.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands copying biom/commands/table_summarizer.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces copying biom/interfaces/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse copying biom/interfaces/optparse/input_handler.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse copying biom/interfaces/optparse/output_handler.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse copying biom/interfaces/optparse/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config copying biom/interfaces/optparse/config/add_metadata.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config copying biom/interfaces/optparse/config/summarize_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config copying biom/interfaces/optparse/config/normalize_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config copying biom/interfaces/optparse/config/convert.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config copying biom/interfaces/optparse/config/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config copying biom/interfaces/optparse/config/show_install_info.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config copying biom/interfaces/optparse/config/subset_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config copying biom/interfaces/optparse/config/validate_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html copying biom/interfaces/html/input_handler.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html copying biom/interfaces/html/output_handler.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html copying biom/interfaces/html/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config copying biom/interfaces/html/config/add_metadata.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config copying biom/interfaces/html/config/summarize_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config copying biom/interfaces/html/config/normalize_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config copying biom/interfaces/html/config/convert.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config copying biom/interfaces/html/config/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config copying biom/interfaces/html/config/show_install_info.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config copying biom/interfaces/html/config/validate_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config running build_ext building 'biom._filter' extension creating build creating build/temp.linux-x86_64-2.7 creating build/temp.linux-x86_64-2.7/biom x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_filter.c -o build/temp.linux-x86_64-2.7/biom/_filter.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_filter.c:250: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:26:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_filter.c:250: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^ In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ufuncobject.h:327:0, from biom/_filter.c:251: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: ‘_import_umath’ defined but not used [-Wunused-function] _import_umath(void) ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-2.7/biom/_filter.o -o /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_filter.so building 'biom._transform' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_transform.c -o build/temp.linux-x86_64-2.7/biom/_transform.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_transform.c:250: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:26:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_transform.c:250: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^ In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ufuncobject.h:327:0, from biom/_transform.c:251: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: ‘_import_umath’ defined but not used [-Wunused-function] _import_umath(void) ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-2.7/biom/_transform.o -o /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_transform.so building 'biom._subsample' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_subsample.c -o build/temp.linux-x86_64-2.7/biom/_subsample.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_subsample.c:250: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:26:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_subsample.c:250: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^ In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ufuncobject.h:327:0, from biom/_subsample.c:251: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: ‘_import_umath’ defined but not used [-Wunused-function] _import_umath(void) ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-2.7/biom/_subsample.o -o /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_subsample.so running build_scripts creating build/scripts-2.7 copying scripts/biom -> build/scripts-2.7 copying scripts/serve-biom -> build/scripts-2.7 changing mode of build/scripts-2.7/serve-biom from 644 to 755 DEB_BUILD_OPTIONS= pybuild -s custom -p 2.7 --test --test-args 'make --directory=doc singlehtml' I: pybuild base:170: make --directory=doc singlehtml make[2]: Entering directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc' sphinx-build -b singlehtml -d _build/doctrees . _build/singlehtml Running Sphinx v1.3.1 making output directory... loading pickled environment... not yet created [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst [autosummary] generating autosummary for: /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.load_table.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.rst [autosummary] generating autosummary for: /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.__eq__.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.__format__.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.__getitem__.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.__init__.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.__iter__.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.__ne__.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.__new__.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.__reduce__.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.__reduce_ex__.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.__repr__.rst, ..., /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.sort.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.sort_order.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.subsample.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.sum.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.to_hdf5.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.to_json.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.to_tsv.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.transform.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.transpose.rst, /«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc/documentation/generated/biom.table.Table.update_ids.rst building [mo]: targets for 0 po files that are out of date building [singlehtml]: all documents updating environment: 90 added, 0 changed, 0 removed reading sources... 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The HTML page is in _build/singlehtml. make[2]: Leaving directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc' DEB_BUILD_OPTIONS= pybuild -s custom -p 2.7 --test --test-args 'pyqi make-bash-completion \ --command-config-module biom.interfaces.optparse.config \ --driver-name biom -o debian/bash-completion' I: pybuild base:170: pyqi make-bash-completion \ --command-config-module biom.interfaces.optparse.config \ --driver-name biom -o debian/bash-completion make[1]: Leaving directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg' dh_auto_test -O--buildsystem=pybuild I: pybuild base:170: cd /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build; python2.7 -m nose ---------------------------------------------------------------------- Ran 0 tests in 0.104s OK fakeroot debian/rules binary dh binary --with python2 --buildsystem=pybuild --with linktree dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:170: /usr/bin/python setup.py install --root /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format running install running build running build_py running build_ext running build_scripts running install_lib creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7 creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/util.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/table.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_subsample.so -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/parse.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/input_handler.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/output_handler.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/add_metadata.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/summarize_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/normalize_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/convert.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/show_install_info.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/validate_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/input_handler.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/output_handler.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/add_metadata.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/summarize_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/normalize_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/convert.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/subset_table.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/convert.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/show_install_info.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/add_metadata.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/subset_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/summarize_table.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/show_install_info.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/validate_table.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/validate_table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/normalize_table.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/input_handler.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/output_handler.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_transform.so -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/err.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/exception.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/exception.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/metadata_adder.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_summarizer.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_subsetter.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/installation_informer.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_subsetter.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_validator.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_validator.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_normalizer.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/__init__.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/installation_informer.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_converter.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/metadata_adder.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_converter.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_normalizer.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_summarizer.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/table.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/parse.py -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/util.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/err.pyc -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /«BUILDDIR»/python-biom-format-2.1.4+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_filter.so -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom byte-compiling /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/input_handler.py to input_handler.pyc byte-compiling /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/output_handler.py to output_handler.pyc byte-compiling /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config/add_metadata.py to add_metadata.pyc byte-compiling /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config/summarize_table.py to summarize_table.pyc byte-compiling /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config/normalize_table.py to normalize_table.pyc byte-compiling /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config/convert.py to convert.pyc byte-compiling /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config/show_install_info.py to show_install_info.pyc byte-compiling /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config/validate_table.py to validate_table.pyc running install_egg_info running egg_info creating biom_format.egg-info writing requirements to biom_format.egg-info/requires.txt writing biom_format.egg-info/PKG-INFO writing top-level names to biom_format.egg-info/top_level.txt writing dependency_links to biom_format.egg-info/dependency_links.txt writing manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' Copying biom_format.egg-info to /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom_format-2.1.4.egg-info Skipping SOURCES.txt running install_scripts creating /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/bin copying build/scripts-2.7/serve-biom -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/bin copying build/scripts-2.7/biom -> /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/bin changing mode of /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/bin/serve-biom to 755 changing mode of /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/bin/biom to 755 debian/rules override_dh_install make[1]: Entering directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg' dh_install dh_bash-completion dh_bash-completion: file-list parsing failed, installing as proper snippet # All *.py scripts simply say # "This script no longer exists. ..." rm -f /«BUILDDIR»/python-biom-format-2.1.4+dfsg/debian/python-biom-format/usr/bin/*.py make[1]: Leaving directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installexamples -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg' DEB_BUILD_OPTIONS= pybuild -s custom -p 2.7 --test --test-args 'make --directory=doc man' I: pybuild base:170: make --directory=doc man make[2]: Entering directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc' sphinx-build -b man -d _build/doctrees . _build/man Running Sphinx v1.3.1 making output directory... loading pickled environment... done [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst building [mo]: targets for 0 po files that are out of date building [man]: all manpages updating environment: 0 added, 0 changed, 0 removed looking for now-outdated files... none found writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/format_versions/biom-2.1 documentation/quick_usage_examples documentation/table_objects documentation/generated/biom.table.Table documentation/generated/biom.table.Table.dtype documentation/generated/biom.table.Table.matrix_data documentation/generated/biom.table.Table.nnz documentation/generated/biom.table.Table.shape documentation/generated/biom.table.Table.__getitem__ documentation/generated/biom.table.Table._extract_data_from_tsv documentation/generated/biom.table.Table.add_group_metadata documentation/generated/biom.table.Table.add_metadata documentation/generated/biom.table.Table.collapse documentation/generated/biom.table.Table.copy documentation/generated/biom.table.Table.data documentation/generated/biom.table.Table.delimited_self documentation/generated/biom.table.Table.descriptive_equality documentation/generated/biom.table.Table.exists documentation/generated/biom.table.Table.filter documentation/generated/biom.table.Table.from_hdf5 documentation/generated/biom.table.Table.from_json documentation/generated/biom.table.Table.from_tsv documentation/generated/biom.table.Table.get_table_density documentation/generated/biom.table.Table.get_value_by_ids documentation/generated/biom.table.Table.group_metadata documentation/generated/biom.table.Table.ids documentation/generated/biom.table.Table.index documentation/generated/biom.table.Table.is_empty documentation/generated/biom.table.Table.iter documentation/generated/biom.table.Table.iter_data documentation/generated/biom.table.Table.iter_pairwise documentation/generated/biom.table.Table.length documentation/generated/biom.table.Table.max documentation/generated/biom.table.Table.merge documentation/generated/biom.table.Table.metadata documentation/generated/biom.table.Table.min documentation/generated/biom.table.Table.nonzero documentation/generated/biom.table.Table.nonzero_counts documentation/generated/biom.table.Table.norm documentation/generated/biom.table.Table.pa documentation/generated/biom.table.Table.partition documentation/generated/biom.table.Table.reduce documentation/generated/biom.table.Table.sort documentation/generated/biom.table.Table.sort_order documentation/generated/biom.table.Table.subsample documentation/generated/biom.table.Table.sum documentation/generated/biom.table.Table.to_hdf5 documentation/generated/biom.table.Table.to_json documentation/generated/biom.table.Table.to_tsv documentation/generated/biom.table.Table.transform documentation/generated/biom.table.Table.transpose documentation/generated/biom.table.Table.update_ids documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE } build succeeded. Build finished. The manual pages are in _build/man. make[2]: Leaving directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg/doc' dh_installman make[1]: Leaving directory '/«BUILDDIR»/python-biom-format-2.1.4+dfsg' dh_python2 -O--buildsystem=pybuild I: dh_python2 fs:316: renaming _filter.so to _filter.x86_64-linux-gnu.so I: dh_python2 fs:316: renaming _subsample.so to _subsample.x86_64-linux-gnu.so I: dh_python2 fs:316: renaming _transform.so to _transform.x86_64-linux-gnu.so dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_linktree -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_strip -O--buildsystem=pybuild dh_strip debug symbol extraction: enabling -a due to Build-Debug-Symbols: yes in /CurrentlyBuilding dh_strip debug symbol extraction: all non-arch-all packages for this build platform amd64: python-biom-format dh_strip debug symbol extraction: packages to act on: python-biom-format dh_strip debug symbol extraction: ignored packages: /usr/bin/pkg_create_dbgsym: ignoring python* package: python-biom-format dh_makeshlibs -O--buildsystem=pybuild dh_shlibdeps -O--buildsystem=pybuild dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.x86_64-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.x86_64-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.x86_64-linux-gnu.so were not linked against libpthread.so.0 (they use none of the library's symbols) dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Provides} dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Versions} dh_gencontrol debug symbol wrapper: all non-arch-all packages for this build platform amd64: python-biom-format dh_gencontrol debug symbol wrapper: packages to act on: python-biom-format dh_gencontrol debug symbol wrapper: ignored packages: dh_gencontrol debug symbol wrapper: no debian/python-biom-format-dbgsym, skipping package python-biom-format dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild INFO: pkgstriptranslations version 122 pkgstriptranslations: processing python-biom-format (in debian/python-biom-format); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python-biom-format/DEBIAN/control, package python-biom-format, directory debian/python-biom-format pkgstripfiles: Truncating usr/share/doc/python-biom-format/changelog.Debian.gz to topmost ten records ** Processing: ./usr/share/doc/python-biom-format/html/_static/file.png 16x16 pixels, 8 bits/pixel, 37 colors (5 transparent) in palette Input IDAT size = 108 bytes Input file size = 358 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 116 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 IDAT size = 110 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 IDAT size = 108 zc = 9 zm = 8 zs = 3 f = 5 ./usr/share/doc/python-biom-format/html/_static/file.png is already optimized. 358 307 85% ./usr/share/doc/python-biom-format/html/_static/file.png 358 307 85% ** Processing: ./usr/share/doc/python-biom-format/html/_static/comment.png 16x16 pixels, 4x8 bits/pixel, RGB+alpha Reducing image to 8 bits/pixel, 140 colors (97 transparent) in palette Input IDAT size = 679 bytes Input file size = 3445 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 245 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 244 zc = 1 zm = 8 zs = 2 f = 0 IDAT size = 239 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 238 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 237 zc = 1 zm = 8 zs = 2 f = 5 IDAT size = 235 zc = 9 zm = 8 zs = 3 f = 5 IDAT size = 235 ./usr/share/doc/python-biom-format/html/_static/comment.png is already optimized. 3445 643 18% ./usr/share/doc/python-biom-format/html/_static/comment.png 3445 643 18% ** Processing: ./usr/share/doc/python-biom-format/html/_static/bullet_orange.png 6x6 pixels, 8 bits/pixel, 32 colors in palette Input IDAT size = 47 bytes Input file size = 365 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 47 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 47 zc = 1 zm = 8 zs = 2 f = 0 IDAT size = 47 zc = 9 zm = 8 zs = 3 f = 0 IDAT size = 47 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 ./usr/share/doc/python-biom-format/html/_static/bullet_orange.png is already optimized. 365 211 57% ./usr/share/doc/python-biom-format/html/_static/bullet_orange.png 365 211 57% ** Processing: ./usr/share/doc/python-biom-format/html/_static/comment-bright.png 16x16 pixels, 4x8 bits/pixel, RGB+alpha Reducing image to 8 bits/pixel, 171 colors (103 transparent) in palette Input IDAT size = 734 bytes Input file size = 3500 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 253 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 253 zc = 1 zm = 8 zs = 2 f = 0 IDAT size = 250 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 IDAT size = 250 zc = 9 zm = 8 zs = 3 f = 5 IDAT size = 250 ./usr/share/doc/python-biom-format/html/_static/comment-bright.png is already optimized. 3500 785 22% ./usr/share/doc/python-biom-format/html/_static/comment-bright.png 3500 785 22% ** Processing: ./usr/share/doc/python-biom-format/html/_static/comment-close.png 16x16 pixels, 4x8 bits/pixel, RGB+alpha Reducing image to 8 bits/pixel, 198 colors (112 transparent) in palette Input IDAT size = 812 bytes Input file size = 3578 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 274 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 IDAT size = 267 zc = 9 zm = 8 zs = 1 f = 3 IDAT size = 266 zc = 1 zm = 8 zs = 2 f = 3 IDAT size = 266 zc = 9 zm = 8 zs = 3 f = 3 IDAT size = 266 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 264 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 264 zc = 1 zm = 8 zs = 2 f = 5 IDAT size = 264 zc = 9 zm = 8 zs = 3 f = 5 IDAT size = 263 ./usr/share/doc/python-biom-format/html/_static/comment-close.png is already optimized. 3578 844 23% ./usr/share/doc/python-biom-format/html/_static/comment-close.png 3578 844 23% ** Processing: ./usr/share/doc/python-biom-format/html/_static/down-pressed.png 16x16 pixels, 8 bits/pixel, 26 colors (25 transparent) in palette Input IDAT size = 97 bytes Input file size = 347 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 107 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 107 zc = 1 zm = 8 zs = 2 f = 0 IDAT size = 103 zc = 9 zm = 8 zs = 3 f = 0 IDAT size = 97 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 ./usr/share/doc/python-biom-format/html/_static/down-pressed.png is already optimized. 347 279 80% ./usr/share/doc/python-biom-format/html/_static/down-pressed.png 347 279 80% ** Processing: ./usr/share/doc/python-biom-format/html/_static/up.png 16x16 pixels, 8 bits/pixel, 26 colors (25 transparent) in palette Input IDAT size = 95 bytes Input file size = 345 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 105 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 103 zc = 1 zm = 8 zs = 2 f = 0 IDAT size = 103 zc = 9 zm = 8 zs = 3 f = 0 IDAT size = 95 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 ./usr/share/doc/python-biom-format/html/_static/up.png is already optimized. 345 280 81% ./usr/share/doc/python-biom-format/html/_static/up.png 345 280 81% ** Processing: ./usr/share/doc/python-biom-format/html/_static/up-pressed.png 16x16 pixels, 8 bits/pixel, 26 colors (25 transparent) in palette Input IDAT size = 95 bytes Input file size = 345 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 105 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 103 zc = 1 zm = 8 zs = 2 f = 0 IDAT size = 103 zc = 9 zm = 8 zs = 3 f = 0 IDAT size = 95 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 ./usr/share/doc/python-biom-format/html/_static/up-pressed.png is already optimized. 345 280 81% ./usr/share/doc/python-biom-format/html/_static/up-pressed.png 345 280 81% ** Processing: ./usr/share/doc/python-biom-format/html/_static/alert_info_32.png 32x32 pixels, 4x8 bits/pixel, RGB+alpha Input IDAT size = 1111 bytes Input file size = 1168 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 1111 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 ./usr/share/doc/python-biom-format/html/_static/alert_info_32.png is already optimized. 1168 1129 96% ./usr/share/doc/python-biom-format/html/_static/alert_info_32.png 1168 1129 96% ** Processing: ./usr/share/doc/python-biom-format/html/_static/alert_warning_32.png 32x32 pixels, 4x8 bits/pixel, RGB+alpha Reducing image to 8 bits/pixel, 255 colors (37 transparent) in palette Input IDAT size = 1003 bytes Input file size = 1060 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 482 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 IDAT size = 456 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 IDAT size = 436 zc = 9 zm = 8 zs = 1 f = 4 IDAT size = 436 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 ./usr/share/doc/python-biom-format/html/_static/alert_warning_32.png is already optimized. 1060 1019 96% ./usr/share/doc/python-biom-format/html/_static/alert_warning_32.png 1060 1019 96% ** Processing: ./usr/share/doc/python-biom-format/html/_static/plus.png 11x11 pixels, 2 bits/pixel, 4 colors in palette Input IDAT size = 32 bytes Input file size = 173 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 32 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 ./usr/share/doc/python-biom-format/html/_static/plus.png is already optimized. 173 113 65% ./usr/share/doc/python-biom-format/html/_static/plus.png 173 113 65% ** Processing: ./usr/share/doc/python-biom-format/html/_static/biom-format.png 170x115 pixels, 4x8 bits/pixel, RGB+alpha Input IDAT size = 8393 bytes Input file size = 11166 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7767 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7767 Output IDAT size = 7767 bytes (626 bytes decrease) Output file size = 10540 bytes (626 bytes = 5.61% decrease) 10540 7350 69% ./usr/share/doc/python-biom-format/html/_static/biom-format.png 10540 7350 69% ** Processing: ./usr/share/doc/python-biom-format/html/_static/bg-page.png 12x104 pixels, 1 bit/pixel, 2 colors in palette Input IDAT size = 16 bytes Input file size = 147 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 16 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 ./usr/share/doc/python-biom-format/html/_static/bg-page.png is already optimized. 147 99 67% ./usr/share/doc/python-biom-format/html/_static/bg-page.png 147 99 67% ** Processing: ./usr/share/doc/python-biom-format/html/_static/down.png 16x16 pixels, 8 bits/pixel, 26 colors (25 transparent) in palette Input IDAT size = 97 bytes Input file size = 347 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 107 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 107 zc = 1 zm = 8 zs = 2 f = 0 IDAT size = 103 zc = 9 zm = 8 zs = 3 f = 0 IDAT size = 97 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 ./usr/share/doc/python-biom-format/html/_static/down.png is already optimized. 347 279 80% ./usr/share/doc/python-biom-format/html/_static/down.png 347 279 80% ** Processing: ./usr/share/doc/python-biom-format/html/_static/minus.png 11x11 pixels, 2 bits/pixel, 4 colors in palette Input IDAT size = 32 bytes Input file size = 173 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 32 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 ./usr/share/doc/python-biom-format/html/_static/minus.png is already optimized. 173 113 65% ./usr/share/doc/python-biom-format/html/_static/minus.png 173 113 65% ** Processing: ./usr/share/doc/python-biom-format/html/_images/biom-format.png 170x115 pixels, 4x8 bits/pixel, RGB+alpha Input IDAT size = 8393 bytes Input file size = 11166 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7767 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 1 zc = 9 zm = 8 zs = 1 f = 1 zc = 1 zm = 8 zs = 2 f = 1 zc = 9 zm = 8 zs = 3 f = 1 zc = 9 zm = 8 zs = 0 f = 2 zc = 9 zm = 8 zs = 1 f = 2 zc = 1 zm = 8 zs = 2 f = 2 zc = 9 zm = 8 zs = 3 f = 2 zc = 9 zm = 8 zs = 0 f = 3 zc = 9 zm = 8 zs = 1 f = 3 zc = 1 zm = 8 zs = 2 f = 3 zc = 9 zm = 8 zs = 3 f = 3 zc = 9 zm = 8 zs = 0 f = 4 zc = 9 zm = 8 zs = 1 f = 4 zc = 1 zm = 8 zs = 2 f = 4 zc = 9 zm = 8 zs = 3 f = 4 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7767 Output IDAT size = 7767 bytes (626 bytes decrease) Output file size = 10540 bytes (626 bytes = 5.61% decrease) 10540 7350 69% ./usr/share/doc/python-biom-format/html/_images/biom-format.png 10540 7350 69% pkgstripfiles: PNG optimization for package python-biom-format took 4 s dpkg-deb: building package 'python-biom-format' in '../python-biom-format_2.1.4+dfsg-1_amd64.deb'. dpkg-genchanges -b -mLaunchpad Build Daemon >../python-biom-format_2.1.4+dfsg-1_amd64.changes dpkg-genchanges: binary-only upload (no source code included) dpkg-source --after-build python-biom-format-2.1.4+dfsg dpkg-buildpackage: binary-only upload (no source included) ──────────────────────────────────────────────────────────────────────────────── Build finished at 20151027-2316 Finished ──────── I: Built successfully ┌──────────────────────────────────────────────────────────────────────────────┐ │ Post Build Chroot │ └──────────────────────────────────────────────────────────────────────────────┘ ┌──────────────────────────────────────────────────────────────────────────────┐ │ Changes │ └──────────────────────────────────────────────────────────────────────────────┘ python-biom-format_2.1.4+dfsg-1_amd64.changes: ────────────────────────────────────────────── Format: 1.8 Date: Tue, 27 Oct 2015 18:46:33 +0100 Source: python-biom-format Binary: python-biom-format Architecture: amd64 Version: 2.1.4+dfsg-1 Distribution: xenial-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: python-biom-format - Biological Observation Matrix (BIOM) format Closes: 802867 Changes: python-biom-format (2.1.4+dfsg-1) unstable; urgency=medium . * New upstream version Closes: #802867 * Moved from SVN to Git * cme fix dpkg-control * Fix watch file Checksums-Sha1: 36accecd10f4922b3fc921746ecd0116b70c127e 196476 python-biom-format_2.1.4+dfsg-1_amd64.deb Checksums-Sha256: c5084808d3d91f538ba6bf2eba907312810a56ed54abbf8c3e960707a0461184 196476 python-biom-format_2.1.4+dfsg-1_amd64.deb Files: 254a8cb145d50648b6acefe8b7a7db72 196476 python optional python-biom-format_2.1.4+dfsg-1_amd64.deb ┌──────────────────────────────────────────────────────────────────────────────┐ │ Package contents │ └──────────────────────────────────────────────────────────────────────────────┘ python-biom-format_2.1.4+dfsg-1_amd64.deb ───────────────────────────────────────── new debian package, version 2.0. size 196476 bytes: control archive=3616 bytes. 42 bytes, 1 lines conffiles 1722 bytes, 30 lines control 7650 bytes, 79 lines md5sums 166 bytes, 9 lines * postinst #!/bin/sh 271 bytes, 14 lines * prerm #!/bin/sh Package: python-biom-format Version: 2.1.4+dfsg-1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 894 Depends: pyqi, python (<< 2.8), python (>= 2.7~), python-numpy, python-scipy, python:any (>= 2.7.5-5~), sphinx-common (>= 1.3.1), libc6 (>= 2.4), python-cogent, python-h5py Section: python Priority: optional Homepage: http://biom-format.org/ Description: Biological Observation Matrix (BIOM) format The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. . The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. drwxr-xr-x root/root 0 2015-10-27 23:16 ./ drwxr-xr-x root/root 0 2015-10-27 23:16 ./etc/ drwxr-xr-x root/root 0 2015-10-27 23:16 ./etc/bash_completion.d/ -rw-r--r-- root/root 1726 2015-10-27 23:16 ./etc/bash_completion.d/python-biom-format drwxr-xr-x root/root 0 2015-10-27 23:16 ./usr/ drwxr-xr-x root/root 0 2015-10-27 23:16 ./usr/bin/ -rwxr-xr-x root/root 835 2015-04-23 03:51 ./usr/bin/biom -rwxr-xr-x root/root 440 2015-04-23 03:51 ./usr/bin/serve-biom drwxr-xr-x root/root 0 2015-10-27 23:16 ./usr/lib/ drwxr-xr-x root/root 0 2015-10-27 23:16 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2015-10-27 23:16 ./usr/lib/python2.7/dist-packages/ drwxr-xr-x root/root 0 2015-10-27 23:16 ./usr/lib/python2.7/dist-packages/biom/ 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┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Build Architecture: amd64 Build-Space: 59956 Build-Time: 33 Distribution: xenial-proposed Host Architecture: amd64 Install-Time: 62 Job: python-biom-format_2.1.4+dfsg-1.dsc Machine Architecture: amd64 Package: python-biom-format Package-Time: 97 Source-Version: 2.1.4+dfsg-1 Space: 59956 Status: successful Version: 2.1.4+dfsg-1 ──────────────────────────────────────────────────────────────────────────────── Finished at 20151027-2316 Build needed 00:01:37, 59956k disc space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-8198901'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-8198901/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-8198901'] Unmounting chroot for build PACKAGEBUILD-8198901... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-8198901'] Removing build PACKAGEBUILD-8198901