https://launchpad.net/ubuntu/+source/python-biom-format/2.1.6+dfsg-2ubuntu2/+build/15606670 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lgw01-amd64-012 4.4.0-138-generic #164-Ubuntu SMP Tue Oct 2 17:16:02 UTC 2018 x86_64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.5 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 3 Nov 16:41:07 ntpdate[1816]: adjust time server 10.211.37.1 offset 0.035232 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15606670 /home/buildd/filecache-default/b71572c9405b6ce6ff1d1ad001cf764bb07f52ae Creating target for build PACKAGEBUILD-15606670 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15606670 Starting target for build PACKAGEBUILD-15606670 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15606670 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-15606670 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15606670 Updating target for build PACKAGEBUILD-15606670 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 Packages [1019 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [513 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe amd64 Packages [8788 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5057 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 Packages [102 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [55.7 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 Packages [439 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [254 kB] Fetched 16.7 MB in 8s (2046 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libgdbm6 libperl5.28 perl-modules-5.28 The following packages will be upgraded: base-files binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-8 dmsetup g++ g++-8 gcc gcc-8 gcc-8-base libapparmor1 libasan5 libatomic1 libaudit-common libaudit1 libbinutils libcap-ng0 libcc1-0 libdevmapper1.02.1 libgcc-8-dev libgcc1 libgdbm-compat4 libgomp1 libitm1 libkmod2 liblsan0 libmpx2 libquadmath0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libstdc++-8-dev libstdc++6 libtsan0 libubsan1 linux-libc-dev perl perl-base tzdata 42 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 41.6 MB of archives. After this operation, 48.6 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main amd64 base-files amd64 10.1ubuntu8 [60.1 kB] Get:2 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 perl-modules-5.28 all 5.28.0-3 [2818 kB] Get:3 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgdbm6 amd64 1.18.1-1 [27.8 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgdbm-compat4 amd64 1.18.1-1 [6148 B] Get:5 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libperl5.28 amd64 5.28.0-3 [3804 kB] Get:6 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 perl amd64 5.28.0-3 [204 kB] Get:7 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 perl-base amd64 5.28.0-3 [1510 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main amd64 libquadmath0 amd64 8.2.0-9ubuntu1 [134 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main amd64 libubsan1 amd64 8.2.0-9ubuntu1 [121 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main amd64 libitm1 amd64 8.2.0-9ubuntu1 [28.1 kB] Get:11 http://ftpmaster.internal/ubuntu disco/main amd64 libasan5 amd64 8.2.0-9ubuntu1 [364 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main amd64 gcc-8-base amd64 8.2.0-9ubuntu1 [18.6 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main amd64 libstdc++6 amd64 8.2.0-9ubuntu1 [399 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main amd64 libgomp1 amd64 8.2.0-9ubuntu1 [76.4 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main amd64 libatomic1 amd64 8.2.0-9ubuntu1 [9076 B] Get:16 http://ftpmaster.internal/ubuntu disco/main amd64 liblsan0 amd64 8.2.0-9ubuntu1 [132 kB] Get:17 http://ftpmaster.internal/ubuntu disco/main amd64 libtsan0 amd64 8.2.0-9ubuntu1 [288 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main amd64 libmpx2 amd64 8.2.0-9ubuntu1 [11.7 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main amd64 cpp-8 amd64 8.2.0-9ubuntu1 [7222 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main amd64 libcc1-0 amd64 8.2.0-9ubuntu1 [39.5 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main amd64 gcc-8 amd64 8.2.0-9ubuntu1 [7999 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main amd64 g++-8 amd64 8.2.0-9ubuntu1 [8115 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main amd64 libstdc++-8-dev amd64 8.2.0-9ubuntu1 [1538 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main amd64 libgcc-8-dev amd64 8.2.0-9ubuntu1 [2304 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main amd64 libgcc1 amd64 1:8.2.0-9ubuntu1 [40.7 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main amd64 libbinutils amd64 2.31.1-7ubuntu1 [483 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main amd64 binutils-common amd64 2.31.1-7ubuntu1 [194 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main amd64 binutils amd64 2.31.1-7ubuntu1 [3392 B] Get:29 http://ftpmaster.internal/ubuntu disco/main amd64 binutils-x86-64-linux-gnu amd64 2.31.1-7ubuntu1 [1829 kB] Get:30 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libaudit-common all 1:2.8.3-1ubuntu3 [4068 B] Get:31 http://ftpmaster.internal/ubuntu disco/main amd64 libcap-ng0 amd64 0.7.9-1build1 [10.9 kB] Get:32 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libaudit1 amd64 1:2.8.3-1ubuntu3 [38.8 kB] Get:33 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libselinux1 amd64 2.8-1build2 [68.6 kB] Get:34 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsemanage-common all 2.8-1build2 [6892 B] Get:35 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsemanage1 amd64 2.8-1build2 [85.1 kB] Get:36 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libseccomp2 amd64 2.3.3-3ubuntu2 [38.9 kB] Get:37 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libdevmapper1.02.1 amd64 2:1.02.145-4.1ubuntu4 [127 kB] Get:38 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dmsetup amd64 2:1.02.145-4.1ubuntu4 [74.6 kB] Get:39 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libapparmor1 amd64 2.12-4ubuntu10 [29.9 kB] Get:40 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libkmod2 amd64 25-1ubuntu1.1 [41.8 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main amd64 tzdata all 2018g-1 [188 kB] Get:42 http://ftpmaster.internal/ubuntu disco/main amd64 g++ amd64 4:8.2.0-2ubuntu2 [1608 B] Get:43 http://ftpmaster.internal/ubuntu disco/main amd64 gcc amd64 4:8.2.0-2ubuntu2 [5224 B] Get:44 http://ftpmaster.internal/ubuntu disco/main amd64 cpp amd64 4:8.2.0-2ubuntu2 [27.6 kB] Get:45 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 linux-libc-dev amd64 4.18.0-11.12 [1039 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 41.6 MB in 4s (9565 kB/s) (Reading database ... 12650 files and directories currently installed.) Preparing to unpack .../base-files_10.1ubuntu8_amd64.deb ... Unpacking base-files (10.1ubuntu8) over (10.1ubuntu7) ... Setting up base-files (10.1ubuntu8) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12650 files and directories currently installed.) Preparing to unpack .../0-perl_5.28.0-3_amd64.deb ... Unpacking perl (5.28.0-3) over (5.26.2-7) ... Selecting previously unselected package perl-modules-5.28. Preparing to unpack .../1-perl-modules-5.28_5.28.0-3_all.deb ... Unpacking perl-modules-5.28 (5.28.0-3) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../2-libgdbm6_1.18.1-1_amd64.deb ... Unpacking libgdbm6:amd64 (1.18.1-1) ... Preparing to unpack .../3-libgdbm-compat4_1.18.1-1_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.18.1-1) over (1.14.1-6) ... 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RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-15606670 amd64 disco-proposed -c chroot:build-PACKAGEBUILD-15606670 --arch=amd64 --dist=disco-proposed --nolog -A python-biom-format_2.1.6+dfsg-2ubuntu2.dsc Initiating build PACKAGEBUILD-15606670 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-138-generic #164-Ubuntu SMP Tue Oct 2 17:16:02 UTC 2018 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-012.buildd +==============================================================================+ | python-biom-format 2.1.6+dfsg-2ubuntu2 (amd64) 03 Nov 2018 16:42 | +==============================================================================+ Package: python-biom-format Version: 2.1.6+dfsg-2ubuntu2 Source Version: 2.1.6+dfsg-2ubuntu2 Distribution: disco-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/python-biom-format-2JFtXp/python-biom-format-2.1.6+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/python-biom-format-2JFtXp' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-15606670/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- python-biom-format_2.1.6+dfsg-2ubuntu2.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-0b6spU/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-0b6spU/apt_archive ./ InRelease Get:2 copy:/<>/resolver-0b6spU/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-0b6spU/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-0b6spU/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-0b6spU/apt_archive ./ Packages [528 B] Fetched 2861 B in 0s (60.1 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-0b6spU/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14539 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11~), dh-python, cython, python-dev, python-numpy, python-scipy, python-h5py, help2man, python-click, python-cogent, python-future, python-nose, python-pandas, python-setuptools, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx Filtered Build-Depends: debhelper (>= 11~), dh-python, cython, python-dev, python-numpy, python-scipy, python-h5py, help2man, python-click, python-cogent, python-future, python-nose, python-pandas, python-setuptools, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx dpkg-deb: building package 'sbuild-build-depends-python-biom-format-dummy' in '/<>/resolver-ed34BP/apt_archive/sbuild-build-depends-python-biom-format-dummy.deb'. Ign:1 copy:/<>/resolver-ed34BP/apt_archive ./ InRelease Get:2 copy:/<>/resolver-ed34BP/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-ed34BP/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-ed34BP/apt_archive ./ Sources [333 B] Get:5 copy:/<>/resolver-ed34BP/apt_archive ./ Packages [658 B] Fetched 3110 B in 0s (42.0 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install python-biom-format build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bash-completion bsdmainutils cython cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-lyx gettext gettext-base groff-base help2man intltool-debian libaec0 libarchive-zip-perl libblas3 libbsd0 libcroco3 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfreetype6 libgfortran5 libglib2.0-0 libhdf5-100 libicu60 libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 liblocale-gettext-perl libmagic-mgc libmagic1 libmpdec2 libpipeline1 libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libsz2 libtimedate-perl libtool libxml2 m4 man-db mime-support po-debconf python python-babel-localedata python-backports.functools-lru-cache python-click python-cogent python-colorama python-configparser python-cycler python-dateutil python-decorator python-dev python-future python-h5py python-kiwisolver python-matplotlib python-matplotlib-data python-minimal python-nose python-numpy python-pandas python-pandas-lib python-pkg-resources python-pyparsing python-scipy python-setuptools python-six python-subprocess32 python-tz python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-alabaster python3-all python3-all-dev python3-babel python3-certifi python3-chardet python3-click python3-colorama python3-dateutil python3-decorator python3-dev python3-distutils python3-docutils python3-future python3-h5py python3-idna python3-imagesize python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal python3-nose python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pkg-resources python3-pygments python3-pyparsing python3-requests python3-roman python3-scipy python3-setuptools python3-six python3-sphinx python3-tz python3-urllib3 python3.7 python3.7-dev python3.7-minimal sgml-base sphinx-common ttf-bitstream-vera xml-core Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cython-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libjs-jquery-ui-docs libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python-doc python-tk python-cogent-doc cdbfasta clustalw fasttree infernal mafft mothur parsinsert raxml rdp-classifier rtax python-cycler-doc python-future-doc python-h5py-doc dvipng ffmpeg gir1.2-gtk-3.0 ghostscript inkscape ipython librsvg2-common python-cairocffi python-configobj python-excelerator python-gobject python-matplotlib-doc python-qt4 python-sip python-tornado python-traits python-wxgtk3.0 texlive-extra-utils texlive-latex-extra ttf-staypuft python-coverage python-nose-doc gfortran python-numpy-dbg python-numpy-doc python-pandas-doc python-pyparsing-doc python-scipy-doc python-setuptools-doc python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python-jinja2-doc python3-numpy-dbg python-pygments-doc python3-cryptography python3-openssl python3-socks imagemagick-6.q16 latexmk libjs-mathjax python3-sphinx-rtd-theme python3-stemmer sphinx-doc texlive-fonts-recommended texlive-generic-extra python3.7-venv python3.7-doc sgml-base-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common libltdl-dev libmail-sendmail-perl blast2 bwa cd-hit clearcut dialign muscle python-pil python-tk python-tables python-numexpr python-xlrd python-statsmodels python-openpyxl python-xlwt python-bs4 python-html5lib python-lxml libpaper-utils python3-pil python3-matplotlib python3-numexpr python3-tables python3-bs4 python3-html5lib python3-lxml The following NEW packages will be installed: autoconf automake autopoint autotools-dev bash-completion bsdmainutils cython cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-lyx gettext gettext-base groff-base help2man intltool-debian libaec0 libarchive-zip-perl libblas3 libbsd0 libcroco3 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfreetype6 libgfortran5 libglib2.0-0 libhdf5-100 libicu60 libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 liblocale-gettext-perl libmagic-mgc libmagic1 libmpdec2 libpipeline1 libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libsz2 libtimedate-perl libtool libxml2 m4 man-db mime-support po-debconf python python-babel-localedata python-backports.functools-lru-cache python-click python-cogent python-colorama python-configparser python-cycler python-dateutil python-decorator python-dev python-future python-h5py python-kiwisolver python-matplotlib python-matplotlib-data python-minimal python-nose python-numpy python-pandas python-pandas-lib python-pkg-resources python-pyparsing python-scipy python-setuptools python-six python-subprocess32 python-tz python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-alabaster python3-all python3-all-dev python3-babel python3-certifi python3-chardet python3-click python3-colorama python3-dateutil python3-decorator python3-dev python3-distutils python3-docutils python3-future python3-h5py python3-idna python3-imagesize python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal python3-nose python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pkg-resources python3-pygments python3-pyparsing python3-requests python3-roman python3-scipy python3-setuptools python3-six python3-sphinx python3-tz python3-urllib3 python3.7 python3.7-dev python3.7-minimal sbuild-build-depends-python-biom-format-dummy sgml-base sphinx-common ttf-bitstream-vera xml-core 0 upgraded, 149 newly installed, 0 to remove and 0 not upgraded. Need to get 174 MB of archives. After this operation, 548 MB of additional disk space will be used. Get:1 copy:/<>/resolver-ed34BP/apt_archive ./ sbuild-build-depends-python-biom-format-dummy 0.invalid.0 [984 B] Get:2 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 liblocale-gettext-perl amd64 1.07-3build3 [16.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3.7-minimal amd64 3.7.1-1 [544 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main amd64 libexpat1 amd64 2.2.6-1 [87.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 python3.7-minimal amd64 3.7.1-1 [1684 kB] Get:6 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3-minimal amd64 3.7.1-1ubuntu1 [23.6 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main amd64 mime-support all 3.60ubuntu1 [30.1 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main amd64 libmpdec2 amd64 2.4.2-2 [84.1 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3.7-stdlib amd64 3.7.1-1 [1733 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main amd64 python3.7 amd64 3.7.1-1 [272 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpython3-stdlib amd64 3.7.1-1ubuntu1 [7128 B] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3 amd64 3.7.1-1ubuntu1 [47.2 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main amd64 libbsd0 amd64 0.9.1-1 [44.6 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main amd64 bsdmainutils amd64 11.1.2ubuntu2 [181 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main amd64 groff-base amd64 1.22.3-10 [1153 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main amd64 libpipeline1 amd64 1.5.0-1 [25.3 kB] Get:17 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 man-db amd64 2.8.4-2build1 [1029 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2.7-minimal amd64 2.7.15-4ubuntu4 [335 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main amd64 python2.7-minimal amd64 2.7.15-4ubuntu4 [1308 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main amd64 python2-minimal amd64 2.7.15-3 [28.1 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main amd64 python-minimal amd64 2.7.15-3 [5996 B] Get:22 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2.7-stdlib amd64 2.7.15-4ubuntu4 [1907 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main amd64 python2.7 amd64 2.7.15-4ubuntu4 [239 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2-stdlib amd64 2.7.15-3 [7728 B] Get:25 http://ftpmaster.internal/ubuntu disco/main amd64 libpython-stdlib amd64 2.7.15-3 [5824 B] Get:26 http://ftpmaster.internal/ubuntu disco/main amd64 python2 amd64 2.7.15-3 [26.5 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main amd64 python amd64 2.7.15-3 [7828 B] Get:28 http://ftpmaster.internal/ubuntu disco/main amd64 sgml-base all 1.29 [12.3 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main amd64 libmagic-mgc amd64 1:5.34-2 [197 kB] Get:30 http://ftpmaster.internal/ubuntu disco/main amd64 libmagic1 amd64 1:5.34-2 [72.3 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main amd64 file amd64 1:5.34-2 [22.8 kB] Get:32 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libelf1 amd64 0.170-0.5.0ubuntu1 [43.5 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main amd64 libglib2.0-0 amd64 2.58.1-2 [1176 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main amd64 libicu60 amd64 60.2-6ubuntu1 [8055 kB] Get:35 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libxml2 amd64 2.9.4+dfsg1-7ubuntu2 [625 kB] Get:36 http://ftpmaster.internal/ubuntu disco/main amd64 bash-completion all 1:2.8-1ubuntu1 [168 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main amd64 gettext-base amd64 0.19.8.1-8 [50.1 kB] Get:38 http://ftpmaster.internal/ubuntu disco/main amd64 libsigsegv2 amd64 2.12-2 [13.9 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main amd64 m4 amd64 1.4.18-1ubuntu1 [199 kB] Get:40 http://ftpmaster.internal/ubuntu disco/main amd64 autoconf all 2.69-11 [322 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main amd64 autotools-dev all 20180224.1 [39.6 kB] Get:42 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 automake all 1:1.16.1-3 [522 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main amd64 autopoint all 0.19.8.1-8 [412 kB] Get:44 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 cython amd64 0.28.4-1build1 [2101 kB] Get:45 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 cython3 amd64 0.28.4-1build1 [2166 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main amd64 libtool all 2.4.6-4 [196 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main amd64 dh-autoreconf all 19 [16.1 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main amd64 libarchive-zip-perl all 1.63-1 [84.8 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main amd64 libfile-stripnondeterminism-perl all 0.042-1 [15.2 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main amd64 libtimedate-perl all 2.3000-2 [37.5 kB] Get:51 http://ftpmaster.internal/ubuntu disco/main amd64 dh-strip-nondeterminism all 0.042-1 [5188 B] Get:52 http://ftpmaster.internal/ubuntu disco/main amd64 dwz amd64 0.12-2 [77.7 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main amd64 libcroco3 amd64 0.6.12-2 [81.3 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main amd64 gettext amd64 0.19.8.1-8 [896 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main amd64 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main amd64 po-debconf all 1.0.20 [232 kB] Get:57 http://ftpmaster.internal/ubuntu disco/main amd64 debhelper all 11.3.2ubuntu1 [883 kB] Get:58 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3-lib2to3 all 3.7.1-1ubuntu2 [74.2 kB] Get:59 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3-distutils all 3.7.1-1ubuntu2 [139 kB] Get:60 http://ftpmaster.internal/ubuntu disco/main amd64 dh-python all 3.20180927ubuntu1 [91.0 kB] Get:61 http://ftpmaster.internal/ubuntu disco/main amd64 xml-core all 0.18 [21.3 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main amd64 docutils-common all 0.14+dfsg-3 [156 kB] Get:63 http://ftpmaster.internal/ubuntu disco/universe amd64 fonts-lyx all 2.3.0-2 [154 kB] Get:64 http://ftpmaster.internal/ubuntu disco/universe amd64 help2man amd64 1.47.6 [162 kB] Get:65 http://ftpmaster.internal/ubuntu disco/universe amd64 libaec0 amd64 1.0.2-1 [19.1 kB] Get:66 http://ftpmaster.internal/ubuntu disco/main amd64 libblas3 amd64 3.8.0-1build1 [138 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main amd64 libexpat1-dev amd64 2.2.6-1 [134 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main amd64 libfreetype6 amd64 2.8.1-2ubuntu2 [335 kB] Get:69 http://ftpmaster.internal/ubuntu disco/main amd64 libgfortran5 amd64 8.2.0-9ubuntu1 [586 kB] Get:70 http://ftpmaster.internal/ubuntu disco/universe amd64 libsz2 amd64 1.0.2-1 [5152 B] Get:71 http://ftpmaster.internal/ubuntu disco/universe amd64 libhdf5-100 amd64 1.10.0-patch1+docs-4build2 [1235 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main amd64 libjs-jquery all 3.2.1-1 [152 kB] Get:73 http://ftpmaster.internal/ubuntu disco/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main amd64 libjs-underscore all 1.8.3~dfsg-1 [59.9 kB] Get:75 http://ftpmaster.internal/ubuntu disco/main amd64 libjs-sphinxdoc all 1.7.9-1 [92.3 kB] Get:76 http://ftpmaster.internal/ubuntu disco/main amd64 liblapack3 amd64 3.8.0-1build1 [2099 kB] Get:77 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2.7 amd64 2.7.15-4ubuntu4 [1034 kB] Get:78 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2.7-dev amd64 2.7.15-4ubuntu4 [31.5 MB] Get:79 http://ftpmaster.internal/ubuntu disco/main amd64 libpython2-dev amd64 2.7.15-3 [7788 B] Get:80 http://ftpmaster.internal/ubuntu disco/main amd64 libpython-dev amd64 2.7.15-3 [5884 B] Get:81 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3.7 amd64 3.7.1-1 [1494 kB] Get:82 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3.7-dev amd64 3.7.1-1 [48.3 MB] Get:83 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpython3-dev amd64 3.7.1-1ubuntu1 [7228 B] Get:84 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpython3-all-dev amd64 3.7.1-1ubuntu1 [1112 B] Get:85 http://ftpmaster.internal/ubuntu disco/main amd64 python-babel-localedata all 2.6.0+dfsg.1-1 [4071 kB] Get:86 http://ftpmaster.internal/ubuntu disco/universe amd64 python-backports.functools-lru-cache all 1.5-1 [6172 B] Get:87 http://ftpmaster.internal/ubuntu disco/main amd64 python-colorama all 0.3.7-1 [22.6 kB] Get:88 http://ftpmaster.internal/ubuntu disco/main amd64 python-click all 6.7+git20180829-1 [62.5 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main amd64 python-configparser all 3.5.0b2-1 [59.3 kB] Get:90 http://ftpmaster.internal/ubuntu disco/main amd64 python-six all 1.11.0-2 [11.3 kB] Get:91 http://ftpmaster.internal/ubuntu disco/universe amd64 python-cycler all 0.10.0-1 [7520 B] Get:92 http://ftpmaster.internal/ubuntu disco/main amd64 python-dateutil all 2.6.1-1 [60.6 kB] Get:93 http://ftpmaster.internal/ubuntu disco/main amd64 python-decorator all 4.3.0-1 [9368 B] Get:94 http://ftpmaster.internal/ubuntu disco/main amd64 python2.7-dev amd64 2.7.15-4ubuntu4 [280 kB] Get:95 http://ftpmaster.internal/ubuntu disco/main amd64 python2-dev amd64 2.7.15-3 [1240 B] Get:96 http://ftpmaster.internal/ubuntu disco/main amd64 python-dev amd64 2.7.15-3 [1220 B] Get:97 http://ftpmaster.internal/ubuntu disco/main amd64 python-future all 0.15.2-5 [335 kB] Get:98 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python-numpy amd64 1:1.14.5-1ubuntu7 [2016 kB] Get:99 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python-h5py amd64 2.8.0-1build1 [688 kB] Get:100 http://ftpmaster.internal/ubuntu disco/main amd64 python-pkg-resources all 40.2.0-1 [128 kB] Get:101 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python-kiwisolver amd64 1.0.1-2build2 [61.9 kB] Get:102 http://ftpmaster.internal/ubuntu disco/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] Get:103 http://ftpmaster.internal/ubuntu disco/universe amd64 python-matplotlib-data all 2.2.2-4build1 [3775 kB] Get:104 http://ftpmaster.internal/ubuntu disco/main amd64 python-pyparsing all 2.2.0+dfsg1-2 [52.1 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main amd64 python-tz all 2018.5-1 [31.5 kB] Get:106 http://ftpmaster.internal/ubuntu disco/universe amd64 python-subprocess32 amd64 3.5.2-1 [26.5 kB] Get:107 http://ftpmaster.internal/ubuntu disco/universe amd64 python-matplotlib amd64 2.2.2-4build1 [4219 kB] Get:108 http://ftpmaster.internal/ubuntu disco/universe amd64 python-nose all 1.3.7-4 [116 kB] Get:109 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python-pandas-lib amd64 0.23.3-1fakesync1ubuntu2 [3482 kB] Get:110 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python-pandas all 0.23.3-1fakesync1ubuntu2 [1730 kB] Get:111 http://ftpmaster.internal/ubuntu disco/main amd64 python-setuptools all 40.2.0-1 [331 kB] Get:112 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3-all amd64 3.7.1-1ubuntu1 [1108 B] Get:113 http://ftpmaster.internal/ubuntu disco/main amd64 python3.7-dev amd64 3.7.1-1 [521 kB] Get:114 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3-dev amd64 3.7.1-1ubuntu1 [1308 B] Get:115 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3-all-dev amd64 3.7.1-1ubuntu1 [1112 B] Get:116 http://ftpmaster.internal/ubuntu disco/main amd64 python3-pkg-resources all 40.2.0-1 [99.1 kB] Get:117 http://ftpmaster.internal/ubuntu disco/main amd64 python3-tz all 2018.5-1 [24.9 kB] Get:118 http://ftpmaster.internal/ubuntu disco/main amd64 python3-babel all 2.6.0+dfsg.1-1 [83.4 kB] Get:119 http://ftpmaster.internal/ubuntu disco/main amd64 python3-certifi all 2018.8.24-1 [140 kB] Get:120 http://ftpmaster.internal/ubuntu disco/main amd64 python3-chardet all 3.0.4-1 [80.3 kB] Get:121 http://ftpmaster.internal/ubuntu disco/main amd64 python3-colorama all 0.3.7-1 [14.9 kB] Get:122 http://ftpmaster.internal/ubuntu disco/main amd64 python3-click all 6.7+git20180829-1 [62.6 kB] Get:123 http://ftpmaster.internal/ubuntu disco/main amd64 python3-six all 1.11.0-2 [11.4 kB] Get:124 http://ftpmaster.internal/ubuntu disco/main amd64 python3-dateutil all 2.6.1-1 [52.3 kB] Get:125 http://ftpmaster.internal/ubuntu disco/main amd64 python3-decorator all 4.3.0-1 [9428 B] Get:126 http://ftpmaster.internal/ubuntu disco/main amd64 python3-roman all 2.0.0-3 [8624 B] Get:127 http://ftpmaster.internal/ubuntu disco/main amd64 python3-docutils all 0.14+dfsg-3 [363 kB] Get:128 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-future all 0.15.2-5 [333 kB] Get:129 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3-numpy amd64 1:1.14.5-1ubuntu7 [2027 kB] Get:130 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python3-h5py amd64 2.8.0-1build1 [703 kB] Get:131 http://ftpmaster.internal/ubuntu disco/main amd64 python3-idna all 2.6-1 [32.5 kB] Get:132 http://ftpmaster.internal/ubuntu disco/main amd64 python3-imagesize all 1.0.0-1 [5004 B] Get:133 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3-markupsafe amd64 1.0-1build3 [13.5 kB] Get:134 http://ftpmaster.internal/ubuntu disco/main amd64 python3-jinja2 all 2.10-1 [95.2 kB] Get:135 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-nose all 1.3.7-4 [116 kB] Get:136 http://ftpmaster.internal/ubuntu disco/main amd64 python3-pyparsing all 2.2.0+dfsg1-2 [52.2 kB] Get:137 http://ftpmaster.internal/ubuntu disco/main amd64 python3-packaging all 17.1-1 [18.2 kB] Get:138 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python3-pandas-lib amd64 0.23.3-1fakesync1ubuntu2 [3459 kB] Get:139 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python3-pandas all 0.23.3-1fakesync1ubuntu2 [1729 kB] Get:140 http://ftpmaster.internal/ubuntu disco/main amd64 python3-pygments all 2.2.0+dfsg-2 [574 kB] Get:141 http://ftpmaster.internal/ubuntu disco/main amd64 python3-urllib3 all 1.22-1 [85.2 kB] Get:142 http://ftpmaster.internal/ubuntu disco/main amd64 python3-requests all 2.18.4-2ubuntu0.18.10.1 [58.3 kB] Get:143 http://ftpmaster.internal/ubuntu disco/main amd64 python3-setuptools all 40.2.0-1 [248 kB] Get:144 http://ftpmaster.internal/ubuntu disco/main amd64 sphinx-common all 1.7.9-1 [437 kB] Get:145 http://ftpmaster.internal/ubuntu disco/main amd64 python3-alabaster all 0.7.8-1 [18.5 kB] Get:146 http://ftpmaster.internal/ubuntu disco/main amd64 python3-sphinx all 1.7.9-1 [449 kB] Get:147 http://ftpmaster.internal/ubuntu disco/universe amd64 python-cogent amd64 1.9-12 [2465 kB] Get:148 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python-scipy amd64 1.1.0-1ubuntu2 [10.1 MB] Get:149 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python3-scipy amd64 1.1.0-1ubuntu2 [10.1 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 174 MB in 16s (10.7 MB/s) Selecting previously unselected package liblocale-gettext-perl. 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Setting up gettext-base (0.19.8.1-8) ... Setting up libpipeline1:amd64 (1.5.0-1) ... Setting up m4 (1.4.18-1ubuntu1) ... Setting up sgml-base (1.29) ... Setting up libbsd0:amd64 (0.9.1-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7ubuntu2) ... Setting up libfreetype6:amd64 (2.8.1-2ubuntu2) ... Setting up libmagic-mgc (1:5.34-2) ... Setting up libmagic1:amd64 (1:5.34-2) ... Setting up libcroco3:amd64 (0.6.12-2) ... Setting up libblas3:amd64 (3.8.0-1build1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up dwz (0.12-2) ... Setting up autotools-dev (20180224.1) ... Setting up python-babel-localedata (2.6.0+dfsg.1-1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up sphinx-common (1.7.9-1) ... Setting up liblocale-gettext-perl (1.07-3build3) ... Setting up libexpat1-dev:amd64 (2.2.6-1) ... Setting up ttf-bitstream-vera (1.10-8) ... Setting up xml-core (0.18) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgfortran5:amd64 (8.2.0-9ubuntu1) ... Setting up libpython2.7-stdlib:amd64 (2.7.15-4ubuntu4) ... Setting up autopoint (0.19.8.1-8) ... Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up fonts-lyx (2.3.0-2) ... Setting up libsz2:amd64 (1.0.2-1) ... Setting up libfile-stripnondeterminism-perl (0.042-1) ... Setting up libpython3.7-stdlib:amd64 (3.7.1-1) ... Setting up libhdf5-100:amd64 (1.10.0-patch1+docs-4build2) ... Setting up python-matplotlib-data (2.2.2-4build1) ... Setting up gettext (0.19.8.1-8) ... Setting up liblapack3:amd64 (3.8.0-1build1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up python2.7 (2.7.15-4ubuntu4) ... Setting up python3.7 (3.7.1-1) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.34-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libpython3.7:amd64 (3.7.1-1) ... Setting up libpython2.7:amd64 (2.7.15-4ubuntu4) ... Setting up automake (1:1.16.1-3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up help2man (1.47.6) ... Setting up libpython3.7-dev:amd64 (3.7.1-1) ... Setting up man-db (2.8.4-2build1) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython2-stdlib:amd64 (2.7.15-3) ... Setting up libpython2.7-dev:amd64 (2.7.15-4ubuntu4) ... Setting up python2.7-dev (2.7.15-4ubuntu4) ... Setting up libpython3-dev:amd64 (3.7.1-1ubuntu1) ... Setting up libtool (2.4.6-4) ... Setting up libpython3-stdlib:amd64 (3.7.1-1ubuntu1) ... Setting up po-debconf (1.0.20) ... Setting up python3 (3.7.1-1ubuntu1) ... Setting up python3-numpy (1:1.14.5-1ubuntu7) ... Setting up python3-alabaster (0.7.8-1) ... Setting up python3-idna (2.6-1) ... Setting up python3-six (1.11.0-2) ... Setting up python3-colorama (0.3.7-1) ... Setting up python3-pyparsing (2.2.0+dfsg1-2) ... Setting up python3-certifi (2018.8.24-1) ... Setting up python3-pkg-resources (40.2.0-1) ... Setting up python3.7-dev (3.7.1-1) ... Setting up python2 (2.7.15-3) ... Setting up python3-markupsafe (1.0-1build3) ... Setting up python3-pandas-lib (0.23.3-1fakesync1ubuntu2) ... Setting up libpython2-dev:amd64 (2.7.15-3) ... Setting up libpython-stdlib:amd64 (2.7.15-3) ... Setting up libpython3-all-dev:amd64 (3.7.1-1ubuntu1) ... Setting up python3-nose (1.3.7-4) ... Setting up python3-chardet (3.0.4-1) ... Setting up python3-jinja2 (2.10-1) ... Setting up python2-dev (2.7.15-3) ... Setting up cython3 (0.28.4-1build1) ... Setting up python3-urllib3 (1.22-1) ... Setting up python3-packaging (17.1-1) ... Setting up python3-lib2to3 (3.7.1-1ubuntu2) ... Setting up python3-decorator (4.3.0-1) ... Setting up python3-tz (2018.5-1) ... Setting up python3-distutils (3.7.1-1ubuntu2) ... Setting up python (2.7.15-3) ... Setting up python3-dateutil (2.6.1-1) ... Setting up python3-h5py (2.8.0-1build1) ... Setting up python-pyparsing (2.2.0+dfsg1-2) ... Setting up python3-pygments (2.2.0+dfsg-2) ... Setting up libpython-dev:amd64 (2.7.15-3) ... Setting up python3-roman (2.0.0-3) ... Setting up python3-scipy (1.1.0-1ubuntu2) ... Setting up python3-imagesize (1.0.0-1) ... Setting up python-backports.functools-lru-cache (1.5-1) ... Setting up python-dev (2.7.15-3) ... Setting up python3-click (6.7+git20180829-1) ... Setting up python-tz (2018.5-1) ... Setting up python-colorama (0.3.7-1) ... Setting up python-pkg-resources (40.2.0-1) ... Setting up python-numpy (1:1.14.5-1ubuntu7) ... Setting up cython (0.28.4-1build1) ... Setting up python3-babel (2.6.0+dfsg.1-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python-configparser (3.5.0b2-1) ... Setting up python-six (1.11.0-2) ... Setting up python3-future (0.15.2-5) ... update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python-pandas-lib (0.23.3-1fakesync1ubuntu2) ... Setting up python3-requests (2.18.4-2ubuntu0.18.10.1) ... Setting up python-decorator (4.3.0-1) ... Setting up python3-pandas (0.23.3-1fakesync1ubuntu2) ... Setting up python-subprocess32 (3.5.2-1) ... Setting up python3-setuptools (40.2.0-1) ... Setting up dh-python (3.20180927ubuntu1) ... Setting up python-nose (1.3.7-4) ... Setting up python-future (0.15.2-5) ... Setting up python-setuptools (40.2.0-1) ... Setting up python-h5py (2.8.0-1build1) ... Setting up python-kiwisolver (1.0.1-2build2) ... Setting up python-scipy (1.1.0-1ubuntu2) ... Setting up python-click (6.7+git20180829-1) ... Setting up python3-dev (3.7.1-1ubuntu1) ... Setting up python-cycler (0.10.0-1) ... Setting up python-dateutil (2.6.1-1) ... Setting up python3-all (3.7.1-1ubuntu1) ... Setting up python3-all-dev (3.7.1-1ubuntu1) ... Setting up python-pandas (0.23.3-1fakesync1ubuntu2) ... Setting up python-matplotlib (2.2.2-4build1) ... Setting up python-cogent (1.9-12) ... Processing triggers for sgml-base (1.29) ... Setting up docutils-common (0.14+dfsg-3) ... Processing triggers for sgml-base (1.29) ... Setting up python3-docutils (0.14+dfsg-3) ... update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python3-sphinx (1.7.9-1) ... update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (0.042-1) ... Setting up debhelper (11.3.2ubuntu1) ... Setting up sbuild-build-depends-python-biom-format-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-138-generic amd64 (x86_64) Toolchain package versions: binutils_2.31.1-7ubuntu1 dpkg-dev_1.19.0.5ubuntu5 g++-8_8.2.0-9ubuntu1 gcc-8_8.2.0-9ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-9ubuntu1 libstdc++6_8.2.0-9ubuntu1 linux-libc-dev_4.18.0-11.12 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.7.0 autoconf_2.69-11 automake_1:1.16.1-3 autopoint_0.19.8.1-8 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_4.4.18-2ubuntu3 bash-completion_1:2.8-1ubuntu1 binutils_2.31.1-7ubuntu1 binutils-common_2.31.1-7ubuntu1 binutils-x86-64-linux-gnu_2.31.1-7ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.32-0.1ubuntu2 build-essential_12.5ubuntu2 bzip2_1.0.6-9 ca-certificates_20180409 coreutils_8.28-1ubuntu2 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pinentry-curses_1.1.0-1build2 pkgbinarymangler_143 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu1 python_2.7.15-3 python-babel-localedata_2.6.0+dfsg.1-1 python-backports.functools-lru-cache_1.5-1 python-click_6.7+git20180829-1 python-cogent_1.9-12 python-colorama_0.3.7-1 python-configparser_3.5.0b2-1 python-cycler_0.10.0-1 python-dateutil_2.6.1-1 python-decorator_4.3.0-1 python-dev_2.7.15-3 python-future_0.15.2-5 python-h5py_2.8.0-1build1 python-kiwisolver_1.0.1-2build2 python-matplotlib_2.2.2-4build1 python-matplotlib-data_2.2.2-4build1 python-minimal_2.7.15-3 python-nose_1.3.7-4 python-numpy_1:1.14.5-1ubuntu7 python-pandas_0.23.3-1fakesync1ubuntu2 python-pandas-lib_0.23.3-1fakesync1ubuntu2 python-pkg-resources_40.2.0-1 python-pyparsing_2.2.0+dfsg1-2 python-scipy_1.1.0-1ubuntu2 python-setuptools_40.2.0-1 python-six_1.11.0-2 python-subprocess32_3.5.2-1 python-tz_2018.5-1 python2_2.7.15-3 python2-dev_2.7.15-3 python2-minimal_2.7.15-3 python2.7_2.7.15-4ubuntu4 python2.7-dev_2.7.15-4ubuntu4 python2.7-minimal_2.7.15-4ubuntu4 python3_3.7.1-1ubuntu1 python3-alabaster_0.7.8-1 python3-all_3.7.1-1ubuntu1 python3-all-dev_3.7.1-1ubuntu1 python3-babel_2.6.0+dfsg.1-1 python3-certifi_2018.8.24-1 python3-chardet_3.0.4-1 python3-click_6.7+git20180829-1 python3-colorama_0.3.7-1 python3-dateutil_2.6.1-1 python3-decorator_4.3.0-1 python3-dev_3.7.1-1ubuntu1 python3-distutils_3.7.1-1ubuntu2 python3-docutils_0.14+dfsg-3 python3-future_0.15.2-5 python3-h5py_2.8.0-1build1 python3-idna_2.6-1 python3-imagesize_1.0.0-1 python3-jinja2_2.10-1 python3-lib2to3_3.7.1-1ubuntu2 python3-markupsafe_1.0-1build3 python3-minimal_3.7.1-1ubuntu1 python3-nose_1.3.7-4 python3-numpy_1:1.14.5-1ubuntu7 python3-packaging_17.1-1 python3-pandas_0.23.3-1fakesync1ubuntu2 python3-pandas-lib_0.23.3-1fakesync1ubuntu2 python3-pkg-resources_40.2.0-1 python3-pygments_2.2.0+dfsg-2 python3-pyparsing_2.2.0+dfsg1-2 python3-requests_2.18.4-2ubuntu0.18.10.1 python3-roman_2.0.0-3 python3-scipy_1.1.0-1ubuntu2 python3-setuptools_40.2.0-1 python3-six_1.11.0-2 python3-sphinx_1.7.9-1 python3-tz_2018.5-1 python3-urllib3_1.22-1 python3.7_3.7.1-1 python3.7-dev_3.7.1-1 python3.7-minimal_3.7.1-1 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-biom-format-dummy_0.invalid.0 sed_4.5-1 sensible-utils_0.0.12 sgml-base_1.29 sphinx-common_1.7.9-1 systemd_239-7ubuntu10 systemd-sysv_239-7ubuntu10 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-2 ttf-bitstream-vera_1.10-8 tzdata_2018g-1 ubuntu-keyring_2018.09.18.1 util-linux_2.32-0.1ubuntu2 xml-core_0.18 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sat Nov 3 16:37:32 2018 UTC gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./python-biom-format_2.1.6+dfsg-2ubuntu2.dsc dpkg-source: info: extracting python-biom-format in python-biom-format-2.1.6+dfsg dpkg-source: info: unpacking python-biom-format_2.1.6+dfsg.orig.tar.xz dpkg-source: info: unpacking python-biom-format_2.1.6+dfsg-2ubuntu2.debian.tar.xz dpkg-source: info: applying ignore_local_dist-packages.patch dpkg-source: info: applying no-web-adds.patch dpkg-source: info: applying fix_future_import.patch dpkg-source: info: applying enable_sloppy_sphinx_build.patch dpkg-source: info: applying random_seed_for_test.patch dpkg-source: info: applying sphinx_1.6.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-15606670 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-15606670 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-15606670 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package python-biom-format dpkg-buildpackage: info: source version 2.1.6+dfsg-2ubuntu2 dpkg-buildpackage: info: source distribution disco dpkg-source --before-build python-biom-format-2.1.6+dfsg dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with python2,python3,bash-completion,sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean --test-nose -i python{version} -p 2.7 I: pybuild base:217: python2.7 setup.py clean running clean removing '/<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build' (and everything under it) 'build/bdist.linux-amd64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it pybuild --clean --test-nose -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py clean running clean removing '/<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build' (and everything under it) 'build/bdist.linux-amd64' does not exist -- can't clean it 'build/scripts-3.7' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python-biom-format.substvars debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars debian/biom-format-tools.substvars debian/files rm -fr -- debian/python-biom-format/ debian/tmp/ debian/python3-biom-format/ debian/python-biom-format-doc/ debian/biom-format-tools/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build --with python2,python3,bash-completion,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure --test-nose -i python{version} -p 2.7 I: pybuild base:217: python2.7 setup.py config running config pybuild --configure --test-nose -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/<>/python-biom-format-2.1.6+dfsg' # arch USE_CYTHON=true dh_auto_build pybuild --build --test-nose -i python{version} -p 2.7 I: pybuild base:217: /usr/bin/python setup.py build Compiling biom/_filter.pyx because it changed. Compiling biom/_transform.pyx because it changed. Compiling biom/_subsample.pyx because it changed. [1/3] Cythonizing biom/_filter.pyx [2/3] Cythonizing biom/_subsample.pyx [3/3] Cythonizing biom/_transform.pyx running build running build_py creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/parse.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/exception.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/err.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests copying tests/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests copying tests/test_parse.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests copying tests/test_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests copying tests/test_err.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests copying tests/test_util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_subsetter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_validator.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_head.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/metadata_adder.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_ids.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/installation_informer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_summarizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_subset_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_validate_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_summarize_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_show_install_info.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_add_metadata.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data copying tests/test_data/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data running egg_info creating biom_format.egg-info writing requirements to biom_format.egg-info/requires.txt writing biom_format.egg-info/PKG-INFO writing top-level names to biom_format.egg-info/top_level.txt writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' copying biom/_filter.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_filter.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_subsample.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_subsample.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_transform.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_transform.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets copying biom/assets/exercise_api.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets copying biom/assets/exercise_cli.sh -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets running build_ext building 'biom._filter' extension creating build creating build/temp.linux-amd64-2.7 creating build/temp.linux-amd64-2.7/biom x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_filter.c -o build/temp.linux-amd64-2.7/biom/_filter.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_filter.c:586: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-VlbVAf/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/biom/_filter.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.so building 'biom._transform' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_transform.c -o build/temp.linux-amd64-2.7/biom/_transform.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_transform.c:586: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-VlbVAf/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/biom/_transform.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.so building 'biom._subsample' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_subsample.c -o build/temp.linux-amd64-2.7/biom/_subsample.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_subsample.c:586: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-VlbVAf/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/biom/_subsample.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.so pybuild --build --test-nose -i python{version} -p 3.7 I: pybuild base:217: /usr/bin/python3 setup.py build running build running build_py creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/parse.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/exception.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/err.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests copying tests/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests copying tests/test_parse.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests copying tests/test_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests copying tests/test_err.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests copying tests/test_util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_subsetter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_validator.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_head.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/metadata_adder.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_ids.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/installation_informer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_summarizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_subset_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_validate_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_summarize_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_show_install_info.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_add_metadata.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data copying tests/test_data/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data running egg_info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' copying biom/_filter.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_filter.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_subsample.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_subsample.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_transform.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_transform.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets copying biom/assets/exercise_api.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets copying biom/assets/exercise_cli.sh -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets running build_ext building 'biom._filter' extension creating build/temp.linux-amd64-3.7 creating build/temp.linux-amd64-3.7/biom x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_filter.c -o build/temp.linux-amd64-3.7/biom/_filter.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_filter.c:586: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/biom/_filter.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.cpython-37m-x86_64-linux-gnu.so building 'biom._transform' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_transform.c -o build/temp.linux-amd64-3.7/biom/_transform.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_transform.c:586: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/biom/_transform.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.cpython-37m-x86_64-linux-gnu.so building 'biom._subsample' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_subsample.c -o build/temp.linux-amd64-3.7/biom/_subsample.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_subsample.c:586: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-3.7/biom/_subsample.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.cpython-37m-x86_64-linux-gnu.so # indep: PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b html doc build/html Running Sphinx v1.7.9 WARNING: sphinx.ext.pngmath has been deprecated. Please use sphinx.ext.imgmath instead. making output directory... loading pickled environment... not yet created [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst Failed to import 'biom': no module named biom Failed to import 'biom.table': no module named biom.table building [mo]: targets for 0 po files that are out of date building [html]: targets for 12 source files that are out of date updating environment: 12 added, 0 changed, 0 removed reading sources... [ 8%] BIOM_LICENSE reading sources... [ 16%] documentation/adding_metadata reading sources... [ 25%] documentation/biom_conversion reading sources... [ 33%] documentation/biom_format reading sources... [ 41%] documentation/format_versions/biom-1.0 reading sources... [ 50%] documentation/format_versions/biom-2.0 reading sources... [ 58%] documentation/format_versions/biom-2.1 reading sources... [ 66%] documentation/index reading sources... [ 75%] documentation/quick_usage_examples reading sources... [ 83%] documentation/summarizing_biom_tables reading sources... [ 91%] documentation/table_objects reading sources... [100%] index WARNING: autodoc: failed to import module 'biom'; the following exception was raised: No module named 'biom._filter' WARNING: autodoc: failed to import module 'biom.table'; the following exception was raised: No module named 'biom._filter' looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 8%] BIOM_LICENSE writing output... [ 16%] documentation/adding_metadata writing output... [ 25%] documentation/biom_conversion writing output... [ 33%] documentation/biom_format writing output... [ 41%] documentation/format_versions/biom-1.0 writing output... [ 50%] documentation/format_versions/biom-2.0 writing output... [ 58%] documentation/format_versions/biom-2.1 writing output... [ 66%] documentation/index writing output... [ 75%] documentation/quick_usage_examples writing output... [ 83%] documentation/summarizing_biom_tables writing output... [ 91%] documentation/table_objects writing output... [100%] index /<>/python-biom-format-2.1.6+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated /<>/python-biom-format-2.1.6+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated /<>/python-biom-format-2.1.6+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated /<>/python-biom-format-2.1.6+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated generating indices... writing additional pages... search copying images... [100%] _static/biom-format.png copying static files... done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 7 warnings. The HTML pages are in build/html. PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b man doc build/man Running Sphinx v1.7.9 WARNING: sphinx.ext.pngmath has been deprecated. Please use sphinx.ext.imgmath instead. making output directory... loading pickled environment... not yet created [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst Failed to import 'biom': no module named biom Failed to import 'biom.table': no module named biom.table building [mo]: targets for 0 po files that are out of date building [man]: all manpages updating environment: 12 added, 0 changed, 0 removed reading sources... [ 8%] BIOM_LICENSE reading sources... [ 16%] documentation/adding_metadata reading sources... [ 25%] documentation/biom_conversion reading sources... [ 33%] documentation/biom_format reading sources... [ 41%] documentation/format_versions/biom-1.0 reading sources... [ 50%] documentation/format_versions/biom-2.0 reading sources... [ 58%] documentation/format_versions/biom-2.1 reading sources... [ 66%] documentation/index reading sources... [ 75%] documentation/quick_usage_examples reading sources... [ 83%] documentation/summarizing_biom_tables reading sources... [ 91%] documentation/table_objects reading sources... [100%] index WARNING: autodoc: failed to import module 'biom'; the following exception was raised: No module named 'biom._filter' WARNING: autodoc: failed to import module 'biom.table'; the following exception was raised: No module named 'biom._filter' looking for now-outdated files... none found pickling environment... done checking consistency... done writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/format_versions/biom-2.1 documentation/quick_usage_examples documentation/table_objects documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE } build succeeded, 3 warnings. The manual pages are in build/man. make[1]: Leaving directory '/<>/python-biom-format-2.1.6+dfsg' dh_auto_test -O--buildsystem=pybuild pybuild --test --test-nose -i python{version} -p 2.7 I: pybuild pybuild:269: cp -r /<>/python-biom-format-2.1.6+dfsg/examples /<>/python-biom-format-2.1.6+dfsg/tests /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build I: pybuild base:217: cd /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build; python2.7 -m nose -v tests Correctly adds observation metadata without casting it. ... ok Correctly adds observation metadata with casting. ... ok Correctly adds sample metadata without casting it. ... ok Correctly adds sample metadata with casting. ... ok test_default (tests.test_cli.test_show_install_info.TestShowInstallInfo) ... ok Correctly raises politically correct error upon invalid input. ... ok Correctly subsets observations in a table. ... ok Correctly subsets samples in a hdf5 table ... ok Correctly subsets samples in a table. ... ok Correctly subsets samples in a hdf5 table ... ok TableSummarizer functions as expected ... ok TableSummarizer functions as expected with qualitative=True ... ok Correctly converts biom to classic. ... ok Correctly converts biom to classic with metadata renaming. ... ok Correctly converts classic to biom. ... ok Correctly converts classic to biom with metadata. ... ok Correctly converts json to HDF5 changing the observation metadata ... ok Correctly converts json to HDF5 changing the sample metadata ... ok test_bad_inputs (tests.test_cli.test_table_normalizer.TableNormalizerTests) ... ok test_basic (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_basic_w_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_missing_id (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_no_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc_w_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok Correctly invalidates a table that is... invalid. ... ok Test an invalid HDF5 table ... ok Correctly validates a table that is indeed... valid. ... ok validates table:columns: fields ... ok validates data: fields ... ok Make sure we have a datetime stamp ... ok Takes a dense matrix field and validates ... ok Should match format string ... ok validates format url ... ok Should have some string for generated by ... ok Test a valid HDF5 table ... ok test_valid_hdf5_metadata_v200 (tests.test_cli.test_validate_table.TableValidatorTests) ... ok test_valid_hdf5_metadata_v210 (tests.test_cli.test_validate_table.TableValidatorTests) ... ok Make sure we have a valid matrix type ... ok Make sure we have a valid matrix type ... ok Can be nullable or an object ... ok Should just work. ... ok validates rows: field ... ok validates shape information ... ok Takes a sparse matrix field and validates ... ok Should be valid table type ... ok test_test_empty (tests.test_err.ErrModeTests) ... ok test_test_obsdup (tests.test_err.ErrModeTests) ... ok test_test_obsmdsize (tests.test_err.ErrModeTests) ... ok test_test_obssize (tests.test_err.ErrModeTests) ... ok test_test_sampdup (tests.test_err.ErrModeTests) ... ok test_test_sampmdsize (tests.test_err.ErrModeTests) ... ok test_test_sampsize (tests.test_err.ErrModeTests) ... ok test_contains (tests.test_err.ErrorProfileTests) ... ok test_getcall (tests.test_err.ErrorProfileTests) ... ok test_handle_error (tests.test_err.ErrorProfileTests) ... ok test_register_unregister (tests.test_err.ErrorProfileTests) ... ok test_setcall (tests.test_err.ErrorProfileTests) ... ok test_state (tests.test_err.ErrorProfileTests) ... ok test_test (tests.test_err.ErrorProfileTests) ... ok test_errcheck (tests.test_err.SupportTests) ... ok test_errstate (tests.test_err.SupportTests) ... ok test_geterr (tests.test_err.SupportTests) ... ok test_geterrcall (tests.test_err.SupportTests) ... ok test_seterr (tests.test_err.SupportTests) ... ok test_seterrcall (tests.test_err.SupportTests) ... ok get a generatedby string ... ok MetadataMap functions as expected ... ok MetadataMap functions as expected w user-provided header ... ok MetadataMap functions as expected w process_fns ... ok test the biom otu table parser ... ok tests for parse_biom_table when we do not have h5py ... ok Make sure we can parse a HDF5 table through the same loader ... ok test the biom table parser subsetting ... ok tests for parse_biom_table when we have h5py ... ok empty uc file returns empty Table ... ok invalid query sequence identifier detected ... ok single library seed observed ... ok single new seed observed ... ok new and library seeds observed ... ok multiple new seeds observed ... ok Yield tables binned by observation metadata ... ok Yield tables binned by sample metadata ... ok test_collapse_median (tests.test_table.SparseTableTests) ... ok Collapse observations by arbitrary metadata ... ok Collapse observations by arbitary metadata ... ok Collapse observations by 1-M metadata using divide mode ... ok Collapse observations by arbitary metadata ... ok Collapse samples by arbitrary metadata ... ok Collapse samples by arbitary metadata ... ok Collapse samples by 1-M metadata using divide mode ... ok Collapse samples by arbitary metadata ... ok Should convert other to sparse type ... ok test_copy_data (tests.test_table.SparseTableTests) ... ok test_copy_ids (tests.test_table.SparseTableTests) ... ok test_copy_metadata (tests.test_table.SparseTableTests) ... ok test_data (tests.test_table.SparseTableTests) ... ok check equality between tables ... ok test_data_sparse (tests.test_table.SparseTableTests) ... ok Print out self in a delimited form ... ok sparse equality ... ok Parses a classic table ... ok test_extract_data_from_tsv_badvalue_complaint (tests.test_table.SparseTableTests) ... ok test_filter_general_observation (tests.test_table.SparseTableTests) ... ok test_filter_general_sample (tests.test_table.SparseTableTests) ... ok test_filter_id_state (tests.test_table.SparseTableTests) ... ok test_filter_observations_id (tests.test_table.SparseTableTests) ... ok test_filter_observations_invert (tests.test_table.SparseTableTests) ... ok test_filter_observations_metadata (tests.test_table.SparseTableTests) ... ok test_filter_observations_remove_everything (tests.test_table.SparseTableTests) ... ok test_filter_out_full_table (tests.test_table.SparseTableTests) ... ok test_filter_return_type (tests.test_table.SparseTableTests) ... ok test_filter_sample_id (tests.test_table.SparseTableTests) ... ok test_filter_sample_invert (tests.test_table.SparseTableTests) ... ok test_filter_sample_metadata (tests.test_table.SparseTableTests) ... ok test_filter_sample_remove_everything (tests.test_table.SparseTableTests) ... ok test_filter_table_with_zeros (tests.test_table.SparseTableTests) ... ok test_filter_using_list_of_ids (tests.test_table.SparseTableTests) ... ok test_from_json_issue_697 (tests.test_table.SparseTableTests) ... ok Test correctly computes density of table. ... ok test_identify_bad_value (tests.test_table.SparseTableTests) ... ok Should iterate over samples ... ok test_iter_data_dense (tests.test_table.SparseTableTests) ... ok test_iter_data_sparse (tests.test_table.SparseTableTests) ... ok Iterate over observations of sparse matrix ... ok Iterates data by observations ... ok Iterates data by observations from a single sample. ... ok Iterates observations ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Iterate over samples of sparse matrix ... ok Iterates data by samples ... ok Iterates data by samples with a single observation. ... ok Iterates samples ... ok Merge two tables ... ok Return a list of nonzero positions ... ok Returns nonzero counts over an axis ... ok Returns nonzero counts over an axis ... ok test_nonzero_csc_bug (tests.test_table.SparseTableTests) ... ok normalize observations by sample ... ok normalize sample by observation ... ok test_other_spmatrix_type (tests.test_table.SparseTableTests) ... ok test_pa (tests.test_table.SparseTableTests) ... ok test_pa_with_neg (tests.test_table.SparseTableTests) ... ok test_pa_works_if_something_has_been_zeroed (tests.test_table.SparseTableTests) ... ok rank observations by sample ... ok rank observations by sample with alt method ... ok rank samples by observation ... ok Reduce method ... ok table sorted by a function and provided axis ... ok sorts tables by arbitrary order ... ok test_subsample (tests.test_table.SparseTableTests) ... ok test_subsample_by_id (tests.test_table.SparseTableTests) ... ok subsample would except when if metadata were present ... ok Test of sum! ... ok Should convert a self styled vector to numpy type ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of integers ... ok Get a BIOM format string for a dense table of integers ... ok test_to_json_empty (tests.test_table.SparseTableTests) ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of integers ... ok Get a BIOM format string for a sparse table of integers ... ok Transform axis by arbitrary function ... ok test_transform_return_type (tests.test_table.SparseTableTests) ... ok test_transform_sample (tests.test_table.SparseTableTests) ... ok Should transpose a sparse table ... ok ids are updated as expected ... ok test_update_ids_cache_bug (tests.test_table.SparseTableTests) ... ok ids are updated as expected ... ok test_concat_different_order (tests.test_table.SupportTests) ... ok test_concat_empty (tests.test_table.SupportTests) ... ok test_concat_multiple (tests.test_table.SupportTests) ... ok test_concat_no_metadata_bug (tests.test_table.SupportTests) ... ok test_concat_observations (tests.test_table.SupportTests) ... ok test_concat_pad_on_subset (tests.test_table.SupportTests) ... ok test_concat_raise_overlap (tests.test_table.SupportTests) ... ok test_concat_samples (tests.test_table.SupportTests) ... ok test_concat_table_type (tests.test_table.SupportTests) ... ok test_head (tests.test_table.SupportTests) ... ok test_head_bounded (tests.test_table.SupportTests) ... ok test_head_overstep (tests.test_table.SupportTests) ... ok test_head_zero_or_neg (tests.test_table.SupportTests) ... ok returns a dict for list lookups ... ok prefer x ... ok test_remove_empty_both (tests.test_table.SupportTests) ... ok test_remove_empty_obs (tests.test_table.SupportTests) ... /usr/lib/python2.7/dist-packages/scipy/sparse/compressed.py:746: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient. SparseEfficiencyWarning) ok test_remove_empty_sample (tests.test_table.SupportTests) ... ok Make sure a TableException can be raised ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok convert (values, (row, col)) to scipy ... ok Take a dict and convert to sparse ... ok Take a list of dicts and condense down to a single dict ... ok convert [[row,col,value], ...] to scipy ... ok lists of nparrays to sparse ... ok list of lil_matrix to sparse ... ok Convert nparray to sparse ... ok Convert to expected sparse types ... ok add group metadata works correctly ... ok add group metadata works with existing metadata ... ok add_sample_metadata functions with single md entry ... ok add_sample_metadata functions with existing metadata ... ok add_metadata functions with more than one md entry ... ok add_sample_metadata functions with more than one md entry ... ok test_all_keys_dropped (tests.test_table.TableTests) ... ok Cast metadata objects to defaultdict to support default values ... ok Properly converts ScipySparseMat vectors to dense numpy repr. ... ok test_data_property (tests.test_table.TableTests) ... ok test_del_metadata_badaxis (tests.test_table.TableTests) ... ok test_del_metadata_defaults (tests.test_table.TableTests) ... ok test_del_metadata_empty_list (tests.test_table.TableTests) ... ok test_del_metadata_full (tests.test_table.TableTests) ... ok test_del_metadata_idempotent (tests.test_table.TableTests) ... ok test_del_metadata_jagged (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_observation (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_sample (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_whole (tests.test_table.TableTests) ... ok test_del_metadata_multiple_keys (tests.test_table.TableTests) ... ok test_del_metadata_nomd (tests.test_table.TableTests) ... ok test_del_metadata_partial (tests.test_table.TableTests) ... ok What's your type? ... ok Test whether two matrices are equal. ... ok Verify ValueError raised! ... ok Parse a hdf5 formatted BIOM table ... ok test_from_hdf5_custom_parsers (tests.test_table.TableTests) ... ok Parse a hdf5 formatted BIOM table w/o metadata ... ok HDF5 biom parse successfully loads an empty table ... ok test_from_hdf5_issue_731 (tests.test_table.TableTests) ... ok Parse a observation subset of a hdf5 formatted BIOM table ... ok Parse a observation subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok hdf5 biom table parse throws error with invalid parameters ... ok test_from_tsv (tests.test_table.TableTests) ... ok test_from_tsv_dense (tests.test_table.TableTests) ... ok Test grabbing a column from the matrix. ... ok Test grabbing a row from the matrix. ... ok Return the value located in the matrix by the ids ... ok getitem should work as expeceted ... ok Test getting an element from the matrix. ... ok Handles invalid input ... ok Returns the observation group metadata ... ok Returns the sample group metadata ... ok Index all the ids!!! ... ok Correctly handles invalid input. ... ok returns the observation index ... ok returns the sample index ... ok to_sparse in constructor should be triggered ... ok Combine ids, intersection ... ok returns true if empty ... ok test_length (tests.test_table.TableTests) ... ok test_max_observation (tests.test_table.TableTests) ... ok test_max_sample (tests.test_table.TableTests) ... ok test_max_whole (tests.test_table.TableTests) ... ok Correctly handles invalid input. ... ok returns the observation metadata ... ok returns the observation metadata for a given id ... ok Return the sample metadata ... ok returns the sample metadata for a given id ... ok test_metadata_to_dataframe (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_badaxis (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_nomd (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_uneven_list_metadata (tests.test_table.TableTests) ... ok test_min_observation (tests.test_table.TableTests) ... ok test_min_sample (tests.test_table.TableTests) ... ok test_min_whole (tests.test_table.TableTests) ... ok Test whether two matrices are not equal. ... ok What is your NNZ? ... ok test_nnz_issue_727 (tests.test_table.TableTests) ... ok Verify observation exist! ... ok __repr__ method of biom.table.Table ... ok Verify samples exist! ... ok What kind of shape are you in? ... ok test_to_dataframe (tests.test_table.TableTests) ... ok Write a file ... ok test_to_hdf5_custom_formatters (tests.test_table.TableTests) ... ok Successfully writes an empty OTU table in HDF5 format ... ok test_to_hdf5_general_fallback_to_list (tests.test_table.TableTests) ... ok test_to_hdf5_malformed_taxonomy (tests.test_table.TableTests) ... ok Print out self in a delimited form ... ok Combine unique ids, union ... ok Make sure the metadata is sane (including obs/sample ids) ... ok test_biom_open_empty (tests.test_util.UtilTests) ... ok test_biom_open_hdf5 (tests.test_util.UtilTests) ... ok test_biom_open_hdf5_no_h5py (tests.test_util.UtilTests) ... SKIP: Skipping test: test_biom_open_hdf5_no_h5py: Can only be tested without H5PY test_biom_open_json (tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok test_compute_counts_per_sample_stats_empty (tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok flatten should remove one level of nesting from nested sequences ... ok flatten should not change non-nested sequences (except to list) ... ok test_generate_subsamples (tests.test_util.UtilTests) ... ok Getting the biom project directory functions as expected. ... ok test_is_hdf5_file (tests.test_util.UtilTests) ... ok test_load_classic (tests.test_util.UtilTests) ... ok test_load_table_gzip_unicode (tests.test_util.UtilTests) ... ok test_load_table_unicode (tests.test_util.UtilTests) ... ok natsort should perform numeric comparisons on strings ... ok parse_biom_config_files functions as expected. ... ok Make sure we have the expected md5 with varied input types ... ok unzip(items) should be the inverse of zip(*items) ... ok ---------------------------------------------------------------------- Ran 309 tests in 8.757s OK (SKIP=1) pybuild --test --test-nose -i python{version} -p 3.7 I: pybuild pybuild:269: cp -r /<>/python-biom-format-2.1.6+dfsg/examples /<>/python-biom-format-2.1.6+dfsg/tests /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build I: pybuild base:217: cd /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build; python3.7 -m nose -v tests Correctly adds observation metadata without casting it. ... ok Correctly adds observation metadata with casting. ... ok Correctly adds sample metadata without casting it. ... ok Correctly adds sample metadata with casting. ... ok test_default (tests.test_cli.test_show_install_info.TestShowInstallInfo) ... ok Correctly raises politically correct error upon invalid input. ... ok Correctly subsets observations in a table. ... ok Correctly subsets samples in a hdf5 table ... ok Correctly subsets samples in a table. ... ok Correctly subsets samples in a hdf5 table ... ok TableSummarizer functions as expected ... ok TableSummarizer functions as expected with qualitative=True ... ok Correctly converts biom to classic. ... ok Correctly converts biom to classic with metadata renaming. ... ok Correctly converts classic to biom. ... ok Correctly converts classic to biom with metadata. ... ok Correctly converts json to HDF5 changing the observation metadata ... ok Correctly converts json to HDF5 changing the sample metadata ... ok test_bad_inputs (tests.test_cli.test_table_normalizer.TableNormalizerTests) ... ok test_basic (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_basic_w_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_missing_id (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_no_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc_w_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok Correctly invalidates a table that is... invalid. ... ok Test an invalid HDF5 table ... ok Correctly validates a table that is indeed... valid. ... ok validates table:columns: fields ... ok validates data: fields ... ok Make sure we have a datetime stamp ... ok Takes a dense matrix field and validates ... ok Should match format string ... ok validates format url ... ok Should have some string for generated by ... ok Test a valid HDF5 table ... ok test_valid_hdf5_metadata_v200 (tests.test_cli.test_validate_table.TableValidatorTests) ... ok test_valid_hdf5_metadata_v210 (tests.test_cli.test_validate_table.TableValidatorTests) ... ok Make sure we have a valid matrix type ... ok Make sure we have a valid matrix type ... ok Can be nullable or an object ... ok Should just work. ... ok validates rows: field ... ok validates shape information ... ok Takes a sparse matrix field and validates ... ok Should be valid table type ... ok test_test_empty (tests.test_err.ErrModeTests) ... ok test_test_obsdup (tests.test_err.ErrModeTests) ... ok test_test_obsmdsize (tests.test_err.ErrModeTests) ... ok test_test_obssize (tests.test_err.ErrModeTests) ... ok test_test_sampdup (tests.test_err.ErrModeTests) ... ok test_test_sampmdsize (tests.test_err.ErrModeTests) ... ok test_test_sampsize (tests.test_err.ErrModeTests) ... ok test_contains (tests.test_err.ErrorProfileTests) ... ok test_getcall (tests.test_err.ErrorProfileTests) ... ok test_handle_error (tests.test_err.ErrorProfileTests) ... ok test_register_unregister (tests.test_err.ErrorProfileTests) ... ok test_setcall (tests.test_err.ErrorProfileTests) ... ok test_state (tests.test_err.ErrorProfileTests) ... ok test_test (tests.test_err.ErrorProfileTests) ... ok test_errcheck (tests.test_err.SupportTests) ... ok test_errstate (tests.test_err.SupportTests) ... ok test_geterr (tests.test_err.SupportTests) ... ok test_geterrcall (tests.test_err.SupportTests) ... ok test_seterr (tests.test_err.SupportTests) ... ok test_seterrcall (tests.test_err.SupportTests) ... ok get a generatedby string ... ok MetadataMap functions as expected ... ok MetadataMap functions as expected w user-provided header ... ok MetadataMap functions as expected w process_fns ... ok test the biom otu table parser ... ok tests for parse_biom_table when we do not have h5py ... ok Make sure we can parse a HDF5 table through the same loader ... ok test the biom table parser subsetting ... ok tests for parse_biom_table when we have h5py ... ok empty uc file returns empty Table ... ok invalid query sequence identifier detected ... ok single library seed observed ... ok single new seed observed ... ok new and library seeds observed ... ok multiple new seeds observed ... ok Yield tables binned by observation metadata ... ok Yield tables binned by sample metadata ... ok test_collapse_median (tests.test_table.SparseTableTests) ... ok Collapse observations by arbitrary metadata ... ok Collapse observations by arbitary metadata ... ok Collapse observations by 1-M metadata using divide mode ... ok Collapse observations by arbitary metadata ... ok Collapse samples by arbitrary metadata ... ok Collapse samples by arbitary metadata ... ok Collapse samples by 1-M metadata using divide mode ... ok Collapse samples by arbitary metadata ... ok Should convert other to sparse type ... ok test_copy_data (tests.test_table.SparseTableTests) ... ok test_copy_ids (tests.test_table.SparseTableTests) ... ok test_copy_metadata (tests.test_table.SparseTableTests) ... ok test_data (tests.test_table.SparseTableTests) ... ok check equality between tables ... ok test_data_sparse (tests.test_table.SparseTableTests) ... ok Print out self in a delimited form ... ok sparse equality ... ok Parses a classic table ... ok test_extract_data_from_tsv_badvalue_complaint (tests.test_table.SparseTableTests) ... ok test_filter_general_observation (tests.test_table.SparseTableTests) ... ok test_filter_general_sample (tests.test_table.SparseTableTests) ... ok test_filter_id_state (tests.test_table.SparseTableTests) ... ok test_filter_observations_id (tests.test_table.SparseTableTests) ... ok test_filter_observations_invert (tests.test_table.SparseTableTests) ... ok test_filter_observations_metadata (tests.test_table.SparseTableTests) ... ok test_filter_observations_remove_everything (tests.test_table.SparseTableTests) ... ok test_filter_out_full_table (tests.test_table.SparseTableTests) ... ok test_filter_return_type (tests.test_table.SparseTableTests) ... ok test_filter_sample_id (tests.test_table.SparseTableTests) ... ok test_filter_sample_invert (tests.test_table.SparseTableTests) ... ok test_filter_sample_metadata (tests.test_table.SparseTableTests) ... ok test_filter_sample_remove_everything (tests.test_table.SparseTableTests) ... ok test_filter_table_with_zeros (tests.test_table.SparseTableTests) ... ok test_filter_using_list_of_ids (tests.test_table.SparseTableTests) ... ok test_from_json_issue_697 (tests.test_table.SparseTableTests) ... ok Test correctly computes density of table. ... ok test_identify_bad_value (tests.test_table.SparseTableTests) ... ok Should iterate over samples ... ok test_iter_data_dense (tests.test_table.SparseTableTests) ... ok test_iter_data_sparse (tests.test_table.SparseTableTests) ... ok Iterate over observations of sparse matrix ... ok Iterates data by observations ... ok Iterates data by observations from a single sample. ... ok Iterates observations ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Iterate over samples of sparse matrix ... ok Iterates data by samples ... ok Iterates data by samples with a single observation. ... ok Iterates samples ... ok Merge two tables ... ok Return a list of nonzero positions ... ok Returns nonzero counts over an axis ... ok Returns nonzero counts over an axis ... ok test_nonzero_csc_bug (tests.test_table.SparseTableTests) ... ok normalize observations by sample ... ok normalize sample by observation ... ok test_other_spmatrix_type (tests.test_table.SparseTableTests) ... ok test_pa (tests.test_table.SparseTableTests) ... ok test_pa_with_neg (tests.test_table.SparseTableTests) ... ok test_pa_works_if_something_has_been_zeroed (tests.test_table.SparseTableTests) ... ok rank observations by sample ... ok rank observations by sample with alt method ... ok rank samples by observation ... ok Reduce method ... ok table sorted by a function and provided axis ... ok sorts tables by arbitrary order ... ok test_subsample (tests.test_table.SparseTableTests) ... ok test_subsample_by_id (tests.test_table.SparseTableTests) ... ok subsample would except when if metadata were present ... ok Test of sum! ... ok Should convert a self styled vector to numpy type ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of integers ... ok Get a BIOM format string for a dense table of integers ... ok test_to_json_empty (tests.test_table.SparseTableTests) ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of integers ... ok Get a BIOM format string for a sparse table of integers ... ok Transform axis by arbitrary function ... ok test_transform_return_type (tests.test_table.SparseTableTests) ... ok test_transform_sample (tests.test_table.SparseTableTests) ... ok Should transpose a sparse table ... ok ids are updated as expected ... ok test_update_ids_cache_bug (tests.test_table.SparseTableTests) ... ok ids are updated as expected ... ok test_concat_different_order (tests.test_table.SupportTests) ... ok test_concat_empty (tests.test_table.SupportTests) ... ok test_concat_multiple (tests.test_table.SupportTests) ... ok test_concat_no_metadata_bug (tests.test_table.SupportTests) ... ok test_concat_observations (tests.test_table.SupportTests) ... ok test_concat_pad_on_subset (tests.test_table.SupportTests) ... ok test_concat_raise_overlap (tests.test_table.SupportTests) ... ok test_concat_samples (tests.test_table.SupportTests) ... ok test_concat_table_type (tests.test_table.SupportTests) ... ok test_head (tests.test_table.SupportTests) ... ok test_head_bounded (tests.test_table.SupportTests) ... ok test_head_overstep (tests.test_table.SupportTests) ... ok test_head_zero_or_neg (tests.test_table.SupportTests) ... ok returns a dict for list lookups ... ok prefer x ... ok test_remove_empty_both (tests.test_table.SupportTests) ... ok test_remove_empty_obs (tests.test_table.SupportTests) ... /usr/lib/python3/dist-packages/scipy/sparse/compressed.py:746: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient. SparseEfficiencyWarning) ok test_remove_empty_sample (tests.test_table.SupportTests) ... ok Make sure a TableException can be raised ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok convert (values, (row, col)) to scipy ... ok Take a dict and convert to sparse ... ok Take a list of dicts and condense down to a single dict ... ok convert [[row,col,value], ...] to scipy ... ok lists of nparrays to sparse ... ok list of lil_matrix to sparse ... ok Convert nparray to sparse ... ok Convert to expected sparse types ... ok add group metadata works correctly ... ok add group metadata works with existing metadata ... ok add_sample_metadata functions with single md entry ... ok add_sample_metadata functions with existing metadata ... ok add_metadata functions with more than one md entry ... ok add_sample_metadata functions with more than one md entry ... ok test_all_keys_dropped (tests.test_table.TableTests) ... ok Cast metadata objects to defaultdict to support default values ... ok Properly converts ScipySparseMat vectors to dense numpy repr. ... ok test_data_property (tests.test_table.TableTests) ... ok test_del_metadata_badaxis (tests.test_table.TableTests) ... ok test_del_metadata_defaults (tests.test_table.TableTests) ... ok test_del_metadata_empty_list (tests.test_table.TableTests) ... ok test_del_metadata_full (tests.test_table.TableTests) ... ok test_del_metadata_idempotent (tests.test_table.TableTests) ... ok test_del_metadata_jagged (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_observation (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_sample (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_whole (tests.test_table.TableTests) ... ok test_del_metadata_multiple_keys (tests.test_table.TableTests) ... ok test_del_metadata_nomd (tests.test_table.TableTests) ... ok test_del_metadata_partial (tests.test_table.TableTests) ... ok What's your type? ... ok Test whether two matrices are equal. ... ok Verify ValueError raised! ... ok Parse a hdf5 formatted BIOM table ... ok test_from_hdf5_custom_parsers (tests.test_table.TableTests) ... ok Parse a hdf5 formatted BIOM table w/o metadata ... ok HDF5 biom parse successfully loads an empty table ... ok test_from_hdf5_issue_731 (tests.test_table.TableTests) ... ok Parse a observation subset of a hdf5 formatted BIOM table ... ok Parse a observation subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok hdf5 biom table parse throws error with invalid parameters ... ok test_from_tsv (tests.test_table.TableTests) ... ok test_from_tsv_dense (tests.test_table.TableTests) ... ok Test grabbing a column from the matrix. ... ok Test grabbing a row from the matrix. ... ok Return the value located in the matrix by the ids ... ok getitem should work as expeceted ... ok Test getting an element from the matrix. ... ok Handles invalid input ... ok Returns the observation group metadata ... ok Returns the sample group metadata ... ok Index all the ids!!! ... ok Correctly handles invalid input. ... ok returns the observation index ... ok returns the sample index ... ok to_sparse in constructor should be triggered ... ok Combine ids, intersection ... ok returns true if empty ... ok test_length (tests.test_table.TableTests) ... ok test_max_observation (tests.test_table.TableTests) ... ok test_max_sample (tests.test_table.TableTests) ... ok test_max_whole (tests.test_table.TableTests) ... ok Correctly handles invalid input. ... ok returns the observation metadata ... ok returns the observation metadata for a given id ... ok Return the sample metadata ... ok returns the sample metadata for a given id ... ok test_metadata_to_dataframe (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_badaxis (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_nomd (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_uneven_list_metadata (tests.test_table.TableTests) ... ok test_min_observation (tests.test_table.TableTests) ... ok test_min_sample (tests.test_table.TableTests) ... ok test_min_whole (tests.test_table.TableTests) ... ok Test whether two matrices are not equal. ... ok What is your NNZ? ... ok test_nnz_issue_727 (tests.test_table.TableTests) ... ok Verify observation exist! ... ok __repr__ method of biom.table.Table ... ok Verify samples exist! ... ok What kind of shape are you in? ... ok test_to_dataframe (tests.test_table.TableTests) ... ok Write a file ... ok test_to_hdf5_custom_formatters (tests.test_table.TableTests) ... ok Successfully writes an empty OTU table in HDF5 format ... ok test_to_hdf5_general_fallback_to_list (tests.test_table.TableTests) ... ok test_to_hdf5_malformed_taxonomy (tests.test_table.TableTests) ... ok Print out self in a delimited form ... ok Combine unique ids, union ... ok Make sure the metadata is sane (including obs/sample ids) ... ok test_biom_open_empty (tests.test_util.UtilTests) ... ok test_biom_open_hdf5 (tests.test_util.UtilTests) ... ok test_biom_open_hdf5_no_h5py (tests.test_util.UtilTests) ... SKIP: Skipping test: test_biom_open_hdf5_no_h5py: Can only be tested without H5PY test_biom_open_json (tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok test_compute_counts_per_sample_stats_empty (tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok flatten should remove one level of nesting from nested sequences ... ok flatten should not change non-nested sequences (except to list) ... ok test_generate_subsamples (tests.test_util.UtilTests) ... ok Getting the biom project directory functions as expected. ... ok test_is_hdf5_file (tests.test_util.UtilTests) ... ok test_load_classic (tests.test_util.UtilTests) ... ok test_load_table_gzip_unicode (tests.test_util.UtilTests) ... ok test_load_table_unicode (tests.test_util.UtilTests) ... ok natsort should perform numeric comparisons on strings ... ok parse_biom_config_files functions as expected. ... ok Make sure we have the expected md5 with varied input types ... ok unzip(items) should be the inverse of zip(*items) ... ok ---------------------------------------------------------------------- Ran 309 tests in 7.420s OK (SKIP=1) create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python2,python3,bash-completion,sphinxdoc --buildsystem=pybuild dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python-biom-format.substvars debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars debian/biom-format-tools.substvars rm -fr -- debian/.debhelper/generated/python-biom-format/ debian/python-biom-format/ debian/tmp/ debian/.debhelper/generated/python3-biom-format/ debian/python3-biom-format/ debian/.debhelper/generated/python-biom-format-doc/ debian/python-biom-format-doc/ debian/.debhelper/generated/biom-format-tools/ debian/biom-format-tools/ rm -f debian/biom-format-tools.debhelper.log debian/python-biom-format-doc.debhelper.log debian/python-biom-format.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/<>/python-biom-format-2.1.6+dfsg' dh_auto_install install -d /<>/python-biom-format-2.1.6\+dfsg/debian/tmp pybuild --install --test-nose -i python{version} -p 2.7 --dest-dir /<>/python-biom-format-2.1.6\+dfsg/debian/tmp I: pybuild base:217: /usr/bin/python setup.py install --root /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format running install running build running build_py running egg_info writing requirements to biom_format.egg-info/requires.txt writing biom_format.egg-info/PKG-INFO writing top-level names to biom_format.egg-info/top_level.txt writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' running build_ext running install_lib creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7 creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/parse.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/err.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/exception.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/table.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/parse.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets/exercise_cli.sh -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets/exercise_api.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/exception.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/util.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/__init__.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/err.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_subsetter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_validator.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_validator.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_subsetter.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/uc_processor.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/metadata_adder.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_ids.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_converter.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_head.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/util.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_normalizer.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/__init__.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/metadata_adder.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_ids.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_summarizer.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/installation_informer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/installation_informer.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_head.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_summarizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/sam_md.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/obs_md.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/min_sparse_otu_table.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/rich_sparse_otu_table.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_err.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_table_converter.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_subset_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_uc_processor.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_validate_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_validate_table.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_add_metadata.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_show_install_info.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_data/json_obs_collapsed.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_data/test.json -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_data/test.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_data/json_sample_collapsed.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_summarize_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_show_install_info.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/__init__.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_table_normalizer.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_add_metadata.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_summarize_table.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_subset_table.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_parse.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_parse.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/test.json.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/no-contents.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/bad_table.txt.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/test.json -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/test.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/bad_table.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/__init__.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/empty.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_util.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/__init__.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_err.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_table.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/parse.py to parse.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/__init__.py to __init__.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/util.py to util.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets/exercise_api.py to exercise_api.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/exception.py to exception.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/table.py to table.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/err.py to err.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/__init__.py to __init__.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/util.py to util.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_subsetter.py to table_subsetter.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_validator.py to table_validator.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/uc_processor.py to uc_processor.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_head.py to table_head.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_converter.py to table_converter.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/metadata_adder.py to metadata_adder.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_ids.py to table_ids.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_normalizer.py to table_normalizer.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/installation_informer.py to installation_informer.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_summarizer.py to table_summarizer.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/__init__.py to __init__.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_subset_table.py to test_subset_table.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_validate_table.py to test_validate_table.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/__init__.py to __init__.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_table_normalizer.py to test_table_normalizer.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_summarize_table.py to test_summarize_table.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_uc_processor.py to test_uc_processor.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_show_install_info.py to test_show_install_info.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_table_converter.py to test_table_converter.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_add_metadata.py to test_add_metadata.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_parse.py to test_parse.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data/__init__.py to __init__.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_table.py to test_table.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_err.py to test_err.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_util.py to test_util.pyc running install_egg_info Copying biom_format.egg-info to /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom_format-2.1.6.egg-info Skipping SOURCES.txt running install_scripts Installing biom script to /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/bin I: pybuild pybuild:295: dh_numpy (grep -a -s -v python:Depends debian/python-biom-format.substvars; echo "python:Depends=python-numpy (>= 1:1.14.3), python-numpy-abi9") > debian/python-biom-format.substvars.new mv debian/python-biom-format.substvars.new debian/python-biom-format.substvars (grep -a -s -v python:Depends debian/python3-biom-format.substvars; echo "python:Depends=python-numpy (>= 1:1.14.3), python-numpy-abi9") > debian/python3-biom-format.substvars.new mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars (grep -a -s -v python:Depends debian/python-biom-format-doc.substvars; echo python:Depends=python-numpy) > debian/python-biom-format-doc.substvars.new mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars (grep -a -s -v python:Depends debian/biom-format-tools.substvars; echo "python:Depends=python-numpy (>= 1:1.14.3), python-numpy-abi9") > debian/biom-format-tools.substvars.new mv debian/biom-format-tools.substvars.new debian/biom-format-tools.substvars pybuild --install --test-nose -i python{version} -p 3.7 --dest-dir /<>/python-biom-format-2.1.6\+dfsg/debian/tmp I: pybuild base:217: /usr/bin/python3 setup.py install --root /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format running install running build running build_py running egg_info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' running build_ext running install_lib creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7 creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/parse.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/__init__.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/parse.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/err.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/table.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/util.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/exception.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets/exercise_cli.sh -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets/exercise_api.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/exception.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/err.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.cpython-37m-x86_64-linux-gnu.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_subsetter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_validator.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_subsetter.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/installation_informer.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/__init__.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_summarizer.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/metadata_adder.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_ids.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_validator.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/util.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_converter.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/uc_processor.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_normalizer.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_head.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_head.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/metadata_adder.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_ids.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/installation_informer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_summarizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/sam_md.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/obs_md.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/min_sparse_otu_table.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/rich_sparse_otu_table.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__pycache__/__init__.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__pycache__/test_util.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__pycache__/test_parse.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__pycache__/test_err.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__pycache__/test_table.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_subset_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_validate_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_uc_processor.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_table_converter.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/__init__.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_add_metadata.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_show_install_info.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_validate_table.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_summarize_table.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_table_normalizer.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_subset_table.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_data/json_obs_collapsed.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_data/test.json -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_data/test.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_data/json_sample_collapsed.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_summarize_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_show_install_info.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_add_metadata.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_parse.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/test.json.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/no-contents.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/__pycache__/__init__.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/bad_table.txt.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/test.json -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/test.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/bad_table.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/empty.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_err.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/parse.py to parse.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/util.py to util.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets/exercise_api.py to exercise_api.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/exception.py to exception.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/table.py to table.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/err.py to err.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/util.py to util.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_subsetter.py to table_subsetter.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_validator.py to table_validator.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/uc_processor.py to uc_processor.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_head.py to table_head.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_converter.py to table_converter.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/metadata_adder.py to metadata_adder.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_ids.py to table_ids.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_normalizer.py to table_normalizer.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/installation_informer.py to installation_informer.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_summarizer.py to table_summarizer.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_subset_table.py to test_subset_table.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_validate_table.py to test_validate_table.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_table_normalizer.py to test_table_normalizer.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_summarize_table.py to test_summarize_table.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_uc_processor.py to test_uc_processor.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_show_install_info.py to test_show_install_info.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_table_converter.py to test_table_converter.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_add_metadata.py to test_add_metadata.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_parse.py to test_parse.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_table.py to test_table.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_err.py to test_err.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_util.py to test_util.cpython-37.pyc running install_egg_info Copying biom_format.egg-info to /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom_format-2.1.6.egg-info Skipping SOURCES.txt running install_scripts Installing biom script to /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/bin I: pybuild pybuild:295: dh_numpy3 (grep -a -s -v python3:Depends debian/python-biom-format.substvars; echo "python3:Depends=python3-numpy (>= 1:1.14.3), python3-numpy-abi9") > debian/python-biom-format.substvars.new mv debian/python-biom-format.substvars.new debian/python-biom-format.substvars (grep -a -s -v python3:Depends debian/python3-biom-format.substvars; echo "python3:Depends=python3-numpy (>= 1:1.14.3), python3-numpy-abi9") > debian/python3-biom-format.substvars.new mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars (grep -a -s -v python3:Depends debian/python-biom-format-doc.substvars; echo python3:Depends=python3-numpy) > debian/python-biom-format-doc.substvars.new mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars (grep -a -s -v python3:Depends debian/biom-format-tools.substvars; echo "python3:Depends=python3-numpy (>= 1:1.14.3), python3-numpy-abi9") > debian/biom-format-tools.substvars.new mv debian/biom-format-tools.substvars.new debian/biom-format-tools.substvars # Install command-line scripts in separate tools package. dh_install --sourcedir=debian/python3-biom-format \ --package=biom-format-tools usr/bin install -d debian/.debhelper/generated/python-biom-format install -d debian/.debhelper/generated/python3-biom-format install -d debian/.debhelper/generated/python-biom-format-doc install -d debian/biom-format-tools//usr cp --reflink=auto -a debian/python3-biom-format/usr/bin debian/biom-format-tools//usr/ install -d debian/.debhelper/generated/biom-format-tools rm -rf debian/python-biom-format/usr/bin rm -rf debian/python3-biom-format/usr/bin make[1]: Leaving directory '/<>/python-biom-format-2.1.6+dfsg' rm -f debian/biom-format-tools.debhelper.log debian/python-biom-format-doc.debhelper.log debian/python-biom-format.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_installdocs-indep make[1]: Entering directory '/<>/python-biom-format-2.1.6+dfsg' dh_installdocs --indep install -d debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc install -d debian/python-biom-format-doc/usr/share/doc/python-biom-format cd './build/html/..' && find 'html' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format-doc/usr/share/doc/python-biom-format chown -R 0:0 debian/python-biom-format-doc/usr/share/doc chmod -R u\+rw,go=rX debian/python-biom-format-doc/usr/share/doc install -p -m0644 debian/copyright debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/copyright install -d debian/python-biom-format-doc/usr/share/doc-base/ install -p -m0644 debian/python-biom-format-doc.doc-base debian/python-biom-format-doc/usr/share/doc-base/python-biom-format dh_sphinxdoc --indep ln -sf ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/underscore.js dh_sphinxdoc: ignoring unknown JavaScript code: debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/copybutton.js ln -sf ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/jquery.js ln -sf ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/searchtools.js ln -sf ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/doctools.js rm -rf debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/.doctrees rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/.buildinfo rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/websupport.js (grep -a -s -v sphinxdoc:Depends debian/python-biom-format-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0)") > debian/python-biom-format-doc.substvars.new mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars (grep -a -s -v sphinxdoc:Built-Using debian/python-biom-format-doc.substvars; echo "sphinxdoc:Built-Using=sphinx (= 1.7.9-1)") > debian/python-biom-format-doc.substvars.new mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars make[1]: Leaving directory '/<>/python-biom-format-2.1.6+dfsg' dh_installdocs -O--buildsystem=pybuild -Npython-biom-format-doc install -d debian/python-biom-format/usr/share/doc/python-biom-format install -p -m0644 debian/copyright debian/python-biom-format/usr/share/doc/python-biom-format/copyright install -d debian/python3-biom-format/usr/share/doc/python3-biom-format install -p -m0644 debian/copyright debian/python3-biom-format/usr/share/doc/python3-biom-format/copyright install -d debian/biom-format-tools/usr/share/doc/biom-format-tools install -p -m0644 debian/copyright debian/biom-format-tools/usr/share/doc/biom-format-tools/copyright dh_sphinxdoc -O--buildsystem=pybuild dh_sphinxdoc: ignoring unknown JavaScript code: debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/copybutton.js (grep -a -s -v sphinxdoc:Built-Using debian/python-biom-format-doc.substvars; echo "sphinxdoc:Built-Using=sphinx (= 1.7.9-1)") > debian/python-biom-format-doc.substvars.new mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars dh_installchangelogs -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/python-biom-format/usr/share/doc/python-biom-format/changelog.Debian install -p -m0644 debian/changelog debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/changelog.Debian install -p -m0644 debian/changelog debian/biom-format-tools/usr/share/doc/biom-format-tools/changelog.Debian install -p -m0644 debian/changelog debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog.Debian dh_installexamples -O--buildsystem=pybuild install -d debian/python-biom-format-doc/usr/share/doc/python-biom-format/examples cp --reflink=auto -a ./examples/min_sparse_otu_table.biom debian/python-biom-format-doc/usr/share/doc/python-biom-format/examples cp --reflink=auto -a ./examples/min_sparse_otu_table_hdf5.biom debian/python-biom-format-doc/usr/share/doc/python-biom-format/examples cp --reflink=auto -a ./examples/obs_md.txt debian/python-biom-format-doc/usr/share/doc/python-biom-format/examples cp --reflink=auto -a ./examples/rich_sparse_otu_table.biom debian/python-biom-format-doc/usr/share/doc/python-biom-format/examples cp --reflink=auto -a ./examples/rich_sparse_otu_table_hdf5.biom debian/python-biom-format-doc/usr/share/doc/python-biom-format/examples cp --reflink=auto -a ./examples/sam_md.txt debian/python-biom-format-doc/usr/share/doc/python-biom-format/examples dh_bash-completion -O--buildsystem=pybuild dh_python2 -O--buildsystem=pybuild D: dh_python2 dh_python2:393: version: 3.20180927ubuntu1 D: dh_python2 dh_python2:394: argv: ['/usr/share/dh-python/dh_python2', '-O--buildsystem=pybuild'] D: dh_python2 dh_python2:395: options: {'guess_versions': True, 'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'namespaces': None, 'clean_pycentral': False, 'shebang': None, 'ignore_shebangs': False, 'ignore_namespace': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python2 dh_python2:396: args: [] D: dh_python2 dh_python2:398: supported Python versions: 2.7 (default=2.7) D: dh_python2 debhelper:107: skipping package: python3-biom-format D: dh_python2 debhelper:100: skipping package biom-format-tools (missing ${python:Depends} in Depends) D: dh_python2 debhelper:153: source=python-biom-format, binary packages=['python-biom-format', 'python-biom-format-doc'] D: dh_python2 dh_python2:415: processing package python-biom-format... D: dh_python2 fs:164: removing dist-packages/tests D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/__init__.pyc D: dh_python2 tools:230: invoking: python2.7 -c 'import sysconfig as s;print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' I: dh_python2 fs:329: renaming _filter.so to _filter.x86_64-linux-gnu.so I: dh_python2 fs:329: renaming _subsample.so to _subsample.x86_64-linux-gnu.so I: dh_python2 fs:329: renaming _transform.so to _transform.x86_64-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/err.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/exception.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/parse.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/table.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/util.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets/exercise_api.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/installation_informer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/metadata_adder.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_converter.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_head.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_ids.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_normalizer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_subsetter.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_summarizer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_validator.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/uc_processor.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/util.pyc D: dh_python2 fs:246: package python-biom-format details = {'requires.txt': {'debian/python-biom-format/usr/lib/python2.7/dist-packages/biom_format-2.1.6.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('2.7')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('2.7')}, 'ext_no_version': set()} D: dh_python2 depends:114: generating dependencies for package python-biom-format D: dh_python2 pydist:137: trying to find dependency for click (python=2.7) D: dh_python2 pydist:137: trying to find dependency for future>=0.16.0 (python=2.7) D: dh_python2 pydist:137: trying to find dependency for numpy>=1.3.0 (python=2.7) D: dh_python2 pydist:137: trying to find dependency for pandas>=0.19.2 (python=2.7) D: dh_python2 pydist:137: trying to find dependency for pyqi (python=2.7) D: dh_python2 pydist:137: trying to find dependency for scipy>=0.13.0 (python=2.7) D: dh_python2 pydist:137: trying to find dependency for six>=1.10.0 (python=2.7) D: dh_python2 depends:272: D={'python-click', 'python (<< 2.8)', 'python:any', 'python-future', 'python-six (>= 1.10.0)', 'python:any (>= 2.7~)', 'python (>= 2.7~)', 'pyqi', 'python-scipy', 'python-numpy', 'python-pandas', 'python:any (<< 2.8)'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python2 dh_python2:415: processing package python-biom-format-doc... D: dh_python2 fs:246: package python-biom-format-doc details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': set(), 'private_dirs': {}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python2 depends:114: generating dependencies for package python-biom-format-doc D: dh_python2 depends:272: D=set(); R=[]; S=[]; E=[], B=[]; RT=[] dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 3.20180927ubuntu1 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:166: supported Python versions: 3.7 (default=3.7) D: dh_python3 debhelper:107: skipping package: python-biom-format D: dh_python3 debhelper:107: skipping package: python-biom-format-doc D: dh_python3 debhelper:153: source=python-biom-format, binary packages=['python3-biom-format', 'biom-format-tools'] D: dh_python3 dh_python3:183: processing package python3-biom-format... D: dh_python3 fs:49: moving files from debian/python3-biom-format/usr/lib/python3.7/dist-packages to debian/python3-biom-format/usr/lib/python3/dist-packages/ D: dh_python3 fs:164: removing dist-packages/tests D: dh_python3 fs:246: package python3-biom-format details = {'requires.txt': {'debian/python3-biom-format/usr/lib/python3/dist-packages/biom_format-2.1.6.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.7')}, 'ext_no_version': set()} D: dh_python3 depends:114: generating dependencies for package python3-biom-format D: dh_python3 pydist:137: trying to find dependency for click (python=None) D: dh_python3 pydist:137: trying to find dependency for future>=0.16.0 (python=None) D: dh_python3 pydist:137: trying to find dependency for numpy>=1.3.0 (python=None) D: dh_python3 pydist:137: trying to find dependency for pandas>=0.19.2 (python=None) D: dh_python3 pydist:137: trying to find dependency for scipy>=0.13.0 (python=None) D: dh_python3 pydist:137: trying to find dependency for six>=1.10.0 (python=None) D: dh_python3 depends:272: D={'python3-numpy', 'python3-future', 'python3 (<< 3.8)', 'python3 (>= 3.7~)', 'python3-scipy', 'python3-six (>= 1.10.0)', 'python3-click', 'python3-pandas', 'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python3 dh_python3:183: processing package biom-format-tools... D: dh_python3 fs:246: package biom-format-tools details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': set(), 'private_dirs': {}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:114: generating dependencies for package biom-format-tools D: dh_python3 depends:272: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/doctools.js ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/doctools.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/underscore.js ln -s ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/underscore.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/searchtools.js ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/searchtools.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/jquery.js ln -s ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/jquery.js dh_strip_nondeterminism -O--buildsystem=pybuild Using 1541262901 as canonical time Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/down-pressed.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/file.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/comment-bright.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/up.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/biom-format.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/comment-close.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/bg-page.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/comment.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/up-pressed.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/alert_warning_32.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/down.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/alert_info_32.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/minus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/plus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/bullet_orange.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_images/biom-format.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python-biom-format cd debian/biom-format-tools cd debian/python-biom-format-doc cd debian/python3-biom-format chmod a-x usr/share/doc/python-biom-format/changelog.Debian chmod a-x usr/share/doc/biom-format-tools/changelog.Debian gzip -9nf usr/share/doc/python-biom-format/changelog.Debian gzip -9nf usr/share/doc/biom-format-tools/changelog.Debian cd '/<>/python-biom-format-2.1.6+dfsg' cd '/<>/python-biom-format-2.1.6+dfsg' chmod a-x usr/share/doc/python3-biom-format/changelog.Debian gzip -9nf usr/share/doc/python3-biom-format/changelog.Debian cd '/<>/python-biom-format-2.1.6+dfsg' chmod a-x usr/share/doc/python-biom-format-doc/changelog.Debian usr/share/doc/python-biom-format/examples/min_sparse_otu_table_hdf5.biom usr/share/doc/python-biom-format/examples/rich_sparse_otu_table_hdf5.biom gzip -9nf usr/share/doc/python-biom-format-doc/changelog.Debian usr/share/doc/python-biom-format/examples/min_sparse_otu_table_hdf5.biom usr/share/doc/python-biom-format/examples/rich_sparse_otu_table_hdf5.biom cd '/<>/python-biom-format-2.1.6+dfsg' dh_fixperms -O--buildsystem=pybuild find debian/python3-biom-format -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python-biom-format -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python-biom-format-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/biom-format-tools -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/biom-format-tools ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/biom-format-tools/usr/share/doc -type f -a -true -a ! -regex 'debian/biom-format-tools/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/biom-format-tools/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/biom-format-tools -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/biom-format-tools/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-biom-format-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biom-format-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-biom-format-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 dh_missing -O--buildsystem=pybuild dh_strip -O--buildsystem=pybuild install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/4e objcopy --only-keep-debug --compress-debug-sections debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.x86_64-linux-gnu.so debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/4e/834f2e42915c3ef41705d6ed30c0b70c91559b.debug install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/32 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/32/aa88e44427de8c6758bda1b4f4e8bebeb08ae2.debug chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/4e/834f2e42915c3ef41705d6ed30c0b70c91559b.debug chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/4e/834f2e42915c3ef41705d6ed30c0b70c91559b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.x86_64-linux-gnu.so chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/32/aa88e44427de8c6758bda1b4f4e8bebeb08ae2.debug chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/32/aa88e44427de8c6758bda1b4f4e8bebeb08ae2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/4e/834f2e42915c3ef41705d6ed30c0b70c91559b.debug debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/32/aa88e44427de8c6758bda1b4f4e8bebeb08ae2.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-x86_64-linux-gnu.so install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/45 objcopy --only-keep-debug --compress-debug-sections debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.x86_64-linux-gnu.so debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/45/250716dc2dbe2ec00669a7ee8b9b032c7ed87f.debug install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/17 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/17/c487b92dac2344cd91f7a4c263e6d22103474e.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/17/c487b92dac2344cd91f7a4c263e6d22103474e.debug chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/17/c487b92dac2344cd91f7a4c263e6d22103474e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-x86_64-linux-gnu.so chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/45/250716dc2dbe2ec00669a7ee8b9b032c7ed87f.debug chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/45/250716dc2dbe2ec00669a7ee8b9b032c7ed87f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/17/c487b92dac2344cd91f7a4c263e6d22103474e.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/45/250716dc2dbe2ec00669a7ee8b9b032c7ed87f.debug debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.x86_64-linux-gnu.so install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/a0 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-x86_64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/a0/01627d42d6acaaf08431fa49c0b9b12072deba.debug install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/c2 objcopy --only-keep-debug --compress-debug-sections debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.x86_64-linux-gnu.so debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/c2/b323e65c893996ad7b8b0c7df6e86992ee6c2c.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/a0/01627d42d6acaaf08431fa49c0b9b12072deba.debug chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/a0/01627d42d6acaaf08431fa49c0b9b12072deba.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-x86_64-linux-gnu.so chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/c2/b323e65c893996ad7b8b0c7df6e86992ee6c2c.debug chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/c2/b323e65c893996ad7b8b0c7df6e86992ee6c2c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/c2/b323e65c893996ad7b8b0c7df6e86992ee6c2c.debug debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/a0/01627d42d6acaaf08431fa49c0b9b12072deba.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-x86_64-linux-gnu.so install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/share/doc ln -s python-biom-format debian/.debhelper/python-biom-format/dbgsym-root/usr/share/doc/python-biom-format-dbgsym install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc ln -s python3-biom-format debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc/python3-biom-format-dbgsym dh_makeshlibs -O--buildsystem=pybuild rm -f debian/python-biom-format/DEBIAN/shlibs rm -f debian/python3-biom-format/DEBIAN/shlibs rm -f debian/python-biom-format-doc/DEBIAN/shlibs rm -f debian/biom-format-tools/DEBIAN/shlibs dh_shlibdeps -O--buildsystem=pybuild install -d debian/python3-biom-format/DEBIAN dpkg-shlibdeps -Tdebian/python3-biom-format.substvars debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-x86_64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-x86_64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-x86_64-linux-gnu.so install -d debian/python-biom-format/DEBIAN dpkg-shlibdeps -Tdebian/python-biom-format.substvars debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.x86_64-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.x86_64-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.x86_64-linux-gnu.so dh_installdeb -O--buildsystem=pybuild printf '#!/bin/sh\nset -e\n' > debian/python-biom-format/DEBIAN/postinst cat debian/python-biom-format.postinst.debhelper >> debian/python-biom-format/DEBIAN/postinst chmod 0755 -- debian/python-biom-format/DEBIAN/postinst chown 0:0 -- debian/python-biom-format/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python-biom-format/DEBIAN/prerm cat debian/python-biom-format.prerm.debhelper >> debian/python-biom-format/DEBIAN/prerm chmod 0755 -- debian/python-biom-format/DEBIAN/prerm chown 0:0 -- debian/python-biom-format/DEBIAN/prerm printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/postinst cat debian/python3-biom-format.postinst.debhelper >> debian/python3-biom-format/DEBIAN/postinst chmod 0755 -- debian/python3-biom-format/DEBIAN/postinst chown 0:0 -- debian/python3-biom-format/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/prerm cat debian/python3-biom-format.prerm.debhelper >> debian/python3-biom-format/DEBIAN/prerm chmod 0755 -- debian/python3-biom-format/DEBIAN/prerm chown 0:0 -- debian/python3-biom-format/DEBIAN/prerm install -d debian/python-biom-format-doc/DEBIAN install -d debian/biom-format-tools/DEBIAN dh_gencontrol -O--buildsystem=pybuild echo misc:Depends= >> debian/python-biom-format-doc.substvars echo misc:Pre-Depends= >> debian/python-biom-format-doc.substvars dpkg-gencontrol -ppython-biom-format-doc -ldebian/changelog -Tdebian/python-biom-format-doc.substvars -Pdebian/python-biom-format-doc -UMulti-Arch echo misc:Depends= >> debian/biom-format-tools.substvars echo misc:Pre-Depends= >> debian/biom-format-tools.substvars dpkg-gencontrol -pbiom-format-tools -ldebian/changelog -Tdebian/biom-format-tools.substvars -Pdebian/biom-format-tools -UMulti-Arch echo misc:Depends= >> debian/python-biom-format.substvars echo misc:Pre-Depends= >> debian/python-biom-format.substvars install -d debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN dpkg-gencontrol -ppython-biom-format -ldebian/changelog -Tdebian/python-biom-format.substvars -Pdebian/.debhelper/python-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python-biom-format-dbgsym "-DDepends=python-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python-biom-format" "-DBuild-Ids=45250716dc2dbe2ec00669a7ee8b9b032c7ed87f 4e834f2e42915c3ef41705d6ed30c0b70c91559b c2b323e65c893996ad7b8b0c7df6e86992ee6c2c" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks echo misc:Depends= >> debian/python3-biom-format.substvars echo misc:Pre-Depends= >> debian/python3-biom-format.substvars install -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/.debhelper/python3-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python3-biom-format-dbgsym "-DDepends=python3-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python3-biom-format" "-DBuild-Ids=17c487b92dac2344cd91f7a4c263e6d22103474e 32aa88e44427de8c6758bda1b4f4e8bebeb08ae2 a001627d42d6acaaf08431fa49c0b9b12072deba" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package biom-format-tools: unused substitution variable ${python:Depends} dpkg-gencontrol: warning: package python-biom-format-doc: unused substitution variable ${python3:Depends} dpkg-gencontrol: warning: package python-biom-format-doc: unused substitution variable ${python:Depends} dpkg-gencontrol: warning: package python-biom-format-doc: unused substitution variable ${sphinxdoc:Built-Using} chmod 0644 -- debian/python-biom-format-doc/DEBIAN/control chown 0:0 -- debian/python-biom-format-doc/DEBIAN/control chmod 0644 -- debian/biom-format-tools/DEBIAN/control chown 0:0 -- debian/biom-format-tools/DEBIAN/control dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python3:Depends} dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Provides} dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Versions} chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython-biom-format -ldebian/changelog -Tdebian/python-biom-format.substvars -Pdebian/python-biom-format -UMulti-Arch dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python3:Provides} dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python3:Versions} dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python:Depends} chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/python3-biom-format -UMulti-Arch dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python3:Depends} dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Provides} dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Versions} chmod 0644 -- debian/python-biom-format/DEBIAN/control chown 0:0 -- debian/python-biom-format/DEBIAN/control dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python3:Provides} dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python3:Versions} dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python:Depends} chmod 0644 -- debian/python3-biom-format/DEBIAN/control chown 0:0 -- debian/python3-biom-format/DEBIAN/control dh_md5sums -O--buildsystem=pybuild (cd debian/python-biom-format >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null (cd debian/python3-biom-format >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null (cd debian/python-biom-format-doc >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null (cd debian/biom-format-tools >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/biom-format-tools/DEBIAN/md5sums chown 0:0 -- debian/biom-format-tools/DEBIAN/md5sums chmod 0644 -- debian/python-biom-format/DEBIAN/md5sums chown 0:0 -- debian/python-biom-format/DEBIAN/md5sums (cd debian/.debhelper/python-biom-format/dbgsym-root >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/python-biom-format-doc/DEBIAN/md5sums chown 0:0 -- debian/python-biom-format-doc/DEBIAN/md5sums chmod 0644 -- debian/python3-biom-format/DEBIAN/md5sums chown 0:0 -- debian/python3-biom-format/DEBIAN/md5sums (cd debian/.debhelper/python3-biom-format/dbgsym-root >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --build debian/python-biom-format .. dpkg-deb --build debian/python3-biom-format .. dpkg-deb --build debian/python-biom-format-doc .. INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 pkgstriptranslations: processing python-biom-format-doc (in debian/python-biom-format-doc); do_strip: , oemstrip: pkgstriptranslations: processing python3-biom-format (in debian/python3-biom-format); do_strip: , oemstrip: pkgstriptranslations: processing python-biom-format (in debian/python-biom-format); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python-biom-format/DEBIAN/control, package python-biom-format, directory debian/python-biom-format pkgstripfiles: processing control file: debian/python-biom-format-doc/DEBIAN/control, package python-biom-format-doc, directory debian/python-biom-format-doc INFO: pkgstripfiles: waiting for lock (python-biom-format-doc) ... pkgstripfiles: Truncating usr/share/doc/python-biom-format/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package python-biom-format ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python-biom-format' in '../python-biom-format_2.1.6+dfsg-2ubuntu2_amd64.deb'. INFO: pkgstripfiles: waiting for lock (python-biom-format-doc) ... install -d debian/.debhelper/scratch-space/build-python-biom-format dpkg-deb --build debian/.debhelper/python-biom-format/dbgsym-root debian/.debhelper/scratch-space/build-python-biom-format INFO: pkgstripfiles: waiting for lock (python-biom-format-doc) ... INFO: pkgstripfiles: waiting for lock (python-biom-format-doc) ... INFO: pkgstriptranslations version 143 INFO: pkgstripfiles: waiting for lock (python-biom-format-doc) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstriptranslations: processing python-biom-format-dbgsym (in debian/.debhelper/python-biom-format/dbgsym-root); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (python-biom-format-doc) ... pkgstripfiles: processing control file: debian/python3-biom-format/DEBIAN/control, package python3-biom-format, directory debian/python3-biom-format pkgstripfiles: Truncating usr/share/doc/python3-biom-format/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-biom-format ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-biom-format' in '../python3-biom-format_2.1.6+dfsg-2ubuntu2_amd64.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: Truncating usr/share/doc/python-biom-format-doc/changelog.Debian.gz to topmost ten records pkgstripfiles: Disabled PNG optimization for -doc package python-biom-format-doc (to save build time) dpkg-deb: building package 'python-biom-format-doc' in '../python-biom-format-doc_2.1.6+dfsg-2ubuntu2_all.deb'. pkgstripfiles: processing control file: debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/control, package python-biom-format-dbgsym, directory debian/.debhelper/python-biom-format/dbgsym-root dpkg-deb: building package 'python-biom-format-dbgsym' in 'debian/.debhelper/scratch-space/build-python-biom-format/python-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_amd64.deb'. dpkg-deb --build debian/biom-format-tools .. Renaming python-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_amd64.deb to python-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_amd64.ddeb mv debian/.debhelper/scratch-space/build-python-biom-format/python-biom-format-dbgsym_2.1.6\+dfsg-2ubuntu2_amd64.deb ../python-biom-format-dbgsym_2.1.6\+dfsg-2ubuntu2_amd64.ddeb install -d debian/.debhelper/scratch-space/build-python3-biom-format dpkg-deb --build debian/.debhelper/python3-biom-format/dbgsym-root debian/.debhelper/scratch-space/build-python3-biom-format INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 pkgstriptranslations: processing biom-format-tools (in debian/biom-format-tools); do_strip: , oemstrip: pkgstriptranslations: processing python3-biom-format-dbgsym (in debian/.debhelper/python3-biom-format/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/biom-format-tools/DEBIAN/control, package biom-format-tools, directory debian/biom-format-tools Searching for duplicated docs in dependency python3-biom-format... symlinking changelog.Debian.gz in biom-format-tools to file in python3-biom-format pkgstripfiles: Running PNG optimization (using 4 cpus) for package biom-format-tools ... pkgstripfiles: No PNG files. dpkg-deb: building package 'biom-format-tools' in '../biom-format-tools_2.1.6+dfsg-2ubuntu2_amd64.deb'. pkgstripfiles: processing control file: debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control, package python3-biom-format-dbgsym, directory debian/.debhelper/python3-biom-format/dbgsym-root dpkg-deb: building package 'python3-biom-format-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-biom-format/python3-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_amd64.deb'. Renaming python3-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_amd64.deb to python3-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_amd64.ddeb mv debian/.debhelper/scratch-space/build-python3-biom-format/python3-biom-format-dbgsym_2.1.6\+dfsg-2ubuntu2_amd64.deb ../python3-biom-format-dbgsym_2.1.6\+dfsg-2ubuntu2_amd64.ddeb dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../python-biom-format_2.1.6+dfsg-2ubuntu2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build python-biom-format-2.1.6+dfsg dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20181103-1647 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ python-biom-format_2.1.6+dfsg-2ubuntu2_amd64.changes: ----------------------------------------------------- Format: 1.8 Date: Sat, 03 Nov 2018 16:35:01 +0000 Source: python-biom-format Binary: python-biom-format python3-biom-format python-biom-format-doc biom-format-tools Architecture: amd64 all Version: 2.1.6+dfsg-2ubuntu2 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: biom-format-tools - command-line tools for BIOM format python-biom-format - Biological Observation Matrix (BIOM) format (Python 2) python-biom-format-doc - documentation for BIOM format python3-biom-format - Biological Observation Matrix (BIOM) format (Python 3) Changes: python-biom-format (2.1.6+dfsg-2ubuntu2) disco; urgency=medium . * No-change rebuild to build without python3.6 support. 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BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. . The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. . This package provides the command-line tools for the BIOM format Python package. drwxr-xr-x root/root 0 2018-11-03 16:35 ./ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/bin/ -rwxr-xr-x root/root 388 2018-11-03 16:35 ./usr/bin/biom drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/doc/biom-format-tools/ lrwxrwxrwx root/root 0 2018-11-03 16:35 ./usr/share/doc/biom-format-tools/changelog.Debian.gz -> ../python3-biom-format/changelog.Debian.gz -rw-r--r-- root/root 1612 2018-06-21 03:31 ./usr/share/doc/biom-format-tools/copyright python-biom-format-doc_2.1.6+dfsg-2ubuntu2_all.deb -------------------------------------------------- new debian package, version 2.0. size 62604 bytes: control archive=2660 bytes. 1682 bytes, 33 lines control 5851 bytes, 58 lines md5sums Package: python-biom-format-doc Source: python-biom-format Version: 2.1.6+dfsg-2ubuntu2 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 492 Depends: libjs-sphinxdoc (>= 1.0) Section: doc Priority: optional Homepage: http://biom-format.org/ Description: documentation for BIOM format The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. . The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. . 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lines * prerm #!/bin/sh Package: python-biom-format Version: 2.1.6+dfsg-2ubuntu2 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1795 Depends: python-numpy (>= 1:1.14.3), python-numpy-abi9, pyqi, python (<< 2.8), python (>= 2.7~), python-click, python-future, python-pandas, python-scipy, python-six (>= 1.10.0), python:any (<< 2.8), python:any (>= 2.7~), libc6 (>= 2.4) Suggests: python-biom-format-doc Section: python Priority: optional Homepage: http://biom-format.org/ Description: Biological Observation Matrix (BIOM) format (Python 2) The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. . The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. . 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./usr/lib/python2.7/dist-packages/examples/sam_md.txt drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/doc/python-biom-format/ -rw-r--r-- root/root 1183 2018-11-03 16:35 ./usr/share/doc/python-biom-format/changelog.Debian.gz -rw-r--r-- root/root 1612 2018-06-21 03:31 ./usr/share/doc/python-biom-format/copyright python3-biom-format_2.1.6+dfsg-2ubuntu2_amd64.deb ------------------------------------------------- new debian package, version 2.0. size 173960 bytes: control archive=2720 bytes. 1919 bytes, 34 lines control 3831 bytes, 42 lines md5sums 264 bytes, 12 lines * postinst #!/bin/sh 413 bytes, 12 lines * prerm #!/bin/sh Package: python3-biom-format Source: python-biom-format Version: 2.1.6+dfsg-2ubuntu2 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1751 Depends: python3-numpy (>= 1:1.14.3), python3-numpy-abi9, python3 (<< 3.8), python3 (>= 3.7~), python3-click, python3-future, python3-pandas, python3-scipy, python3-six (>= 1.10.0), python3:any, libc6 (>= 2.4) Suggests: python-biom-format-doc Section: python Priority: optional Homepage: http://biom-format.org/ Description: Biological Observation Matrix (BIOM) format (Python 3) The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. . The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. . 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amd64 Install-Time: 195 Job: python-biom-format_2.1.6+dfsg-2ubuntu2.dsc Machine Architecture: amd64 Package: python-biom-format Package-Time: 331 Source-Version: 2.1.6+dfsg-2ubuntu2 Space: 172400 Status: successful Version: 2.1.6+dfsg-2ubuntu2 -------------------------------------------------------------------------------- Finished at 20181103-1647 Build needed 00:05:31, 172400k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15606670 Scanning for processes to kill in build PACKAGEBUILD-15606670