https://launchpad.net/ubuntu/+source/python-biom-format/2.1.6+dfsg-2ubuntu2/+build/15606673 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lgw01-amd64-015 4.4.0-138-generic #164-Ubuntu SMP Tue Oct 2 17:16:02 UTC 2018 x86_64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.5 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 3 Nov 16:41:07 ntpdate[1819]: adjust time server 10.211.37.1 offset 0.036362 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=i386 PACKAGEBUILD-15606673 /home/buildd/filecache-default/727e394105280e93a16c79dcca0079cc298d61c4 Creating target for build PACKAGEBUILD-15606673 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=i386 PACKAGEBUILD-15606673 Starting target for build PACKAGEBUILD-15606673 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=i386 PACKAGEBUILD-15606673 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-15606673 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=i386 PACKAGEBUILD-15606673 Updating target for build PACKAGEBUILD-15606673 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main i386 Packages [1007 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [513 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe i386 Packages [8732 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5057 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main i386 Packages [94.2 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [55.7 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 Packages [437 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [254 kB] Fetched 16.6 MB in 9s (1782 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libgdbm6 libperl5.28 perl-modules-5.28 The following packages will be upgraded: base-files binutils binutils-common binutils-i686-linux-gnu cpp cpp-8 dmsetup g++ g++-8 gcc gcc-8 gcc-8-base libapparmor1 libasan5 libatomic1 libaudit-common libaudit1 libbinutils libcap-ng0 libcc1-0 libdevmapper1.02.1 libgcc-8-dev libgcc1 libgdbm-compat4 libgomp1 libitm1 libkmod2 libmpx2 libquadmath0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libstdc++-8-dev libstdc++6 libubsan1 linux-libc-dev perl perl-base tzdata 40 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 42.2 MB of archives. After this operation, 42.8 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main i386 base-files i386 10.1ubuntu8 [60.2 kB] Get:2 http://ftpmaster.internal/ubuntu disco-proposed/main i386 perl-modules-5.28 all 5.28.0-3 [2818 kB] Get:3 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libgdbm6 i386 1.18.1-1 [32.1 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libgdbm-compat4 i386 1.18.1-1 [6704 B] Get:5 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libperl5.28 i386 5.28.0-3 [3436 kB] Get:6 http://ftpmaster.internal/ubuntu disco-proposed/main i386 perl i386 5.28.0-3 [204 kB] Get:7 http://ftpmaster.internal/ubuntu disco-proposed/main i386 perl-base i386 5.28.0-3 [1600 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main i386 libquadmath0 i386 8.2.0-9ubuntu1 [208 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main i386 libubsan1 i386 8.2.0-9ubuntu1 [138 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main i386 libitm1 i386 8.2.0-9ubuntu1 [30.8 kB] Get:11 http://ftpmaster.internal/ubuntu disco/main i386 libasan5 i386 8.2.0-9ubuntu1 [375 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main i386 gcc-8-base i386 8.2.0-9ubuntu1 [18.6 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main i386 libstdc++6 i386 8.2.0-9ubuntu1 [430 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main i386 libgomp1 i386 8.2.0-9ubuntu1 [80.7 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main i386 libatomic1 i386 8.2.0-9ubuntu1 [9604 B] Get:16 http://ftpmaster.internal/ubuntu disco/main i386 libmpx2 i386 8.2.0-9ubuntu1 [13.0 kB] Get:17 http://ftpmaster.internal/ubuntu disco/main i386 cpp-8 i386 8.2.0-9ubuntu1 [7537 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main i386 libcc1-0 i386 8.2.0-9ubuntu1 [41.9 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main i386 gcc-8 i386 8.2.0-9ubuntu1 [8330 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main i386 g++-8 i386 8.2.0-9ubuntu1 [8444 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main i386 libstdc++-8-dev i386 8.2.0-9ubuntu1 [1586 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main i386 libgcc-8-dev i386 8.2.0-9ubuntu1 [2299 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main i386 libgcc1 i386 1:8.2.0-9ubuntu1 [48.1 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main i386 libbinutils i386 2.31.1-7ubuntu1 [518 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main i386 binutils-common i386 2.31.1-7ubuntu1 [194 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main i386 binutils i386 2.31.1-7ubuntu1 [3392 B] Get:27 http://ftpmaster.internal/ubuntu disco/main i386 binutils-i686-linux-gnu i386 2.31.1-7ubuntu1 [1985 kB] Get:28 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libaudit-common all 1:2.8.3-1ubuntu3 [4068 B] Get:29 http://ftpmaster.internal/ubuntu disco/main i386 libcap-ng0 i386 0.7.9-1build1 [11.1 kB] Get:30 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libaudit1 i386 1:2.8.3-1ubuntu3 [40.0 kB] Get:31 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libselinux1 i386 2.8-1build2 [73.5 kB] Get:32 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libsemanage-common all 2.8-1build2 [6892 B] Get:33 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libsemanage1 i386 2.8-1build2 [93.8 kB] Get:34 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libseccomp2 i386 2.3.3-3ubuntu2 [35.6 kB] Get:35 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libdevmapper1.02.1 i386 2:1.02.145-4.1ubuntu4 [125 kB] Get:36 http://ftpmaster.internal/ubuntu disco-proposed/main i386 dmsetup i386 2:1.02.145-4.1ubuntu4 [70.4 kB] Get:37 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libapparmor1 i386 2.12-4ubuntu10 [31.3 kB] Get:38 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libkmod2 i386 25-1ubuntu1.1 [47.7 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main i386 tzdata all 2018g-1 [188 kB] Get:40 http://ftpmaster.internal/ubuntu disco/main i386 g++ i386 4:8.2.0-2ubuntu2 [1616 B] Get:41 http://ftpmaster.internal/ubuntu disco/main i386 gcc i386 4:8.2.0-2ubuntu2 [5272 B] Get:42 http://ftpmaster.internal/ubuntu disco/main i386 cpp i386 4:8.2.0-2ubuntu2 [27.6 kB] Get:43 http://ftpmaster.internal/ubuntu disco-proposed/main i386 linux-libc-dev i386 4.18.0-11.12 [1040 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 42.2 MB in 4s (9807 kB/s) (Reading database ... 12644 files and directories currently installed.) Preparing to unpack .../base-files_10.1ubuntu8_i386.deb ... Unpacking base-files (10.1ubuntu8) over (10.1ubuntu7) ... Setting up base-files (10.1ubuntu8) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12644 files and directories currently installed.) Preparing to unpack .../0-perl_5.28.0-3_i386.deb ... Unpacking perl (5.28.0-3) over (5.26.2-7) ... Selecting previously unselected package perl-modules-5.28. Preparing to unpack .../1-perl-modules-5.28_5.28.0-3_all.deb ... Unpacking perl-modules-5.28 (5.28.0-3) ... Selecting previously unselected package libgdbm6:i386. Preparing to unpack .../2-libgdbm6_1.18.1-1_i386.deb ... Unpacking libgdbm6:i386 (1.18.1-1) ... Preparing to unpack .../3-libgdbm-compat4_1.18.1-1_i386.deb ... Unpacking libgdbm-compat4:i386 (1.18.1-1) over (1.14.1-6) ... Selecting previously unselected package libperl5.28:i386. 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Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up linux-libc-dev:i386 (4.18.0-11.12) ... Setting up libdevmapper1.02.1:i386 (2:1.02.145-4.1ubuntu4) ... Setting up libkmod2:i386 (25-1ubuntu1.1) ... Setting up libgdbm6:i386 (1.18.1-1) ... Setting up binutils-common:i386 (2.31.1-7ubuntu1) ... Setting up libmpx2:i386 (8.2.0-9ubuntu1) ... Setting up perl-modules-5.28 (5.28.0-3) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up libapparmor1:i386 (2.12-4ubuntu10) ... Setting up dmsetup (2:1.02.145-4.1ubuntu4) ... Setting up libgdbm-compat4:i386 (1.18.1-1) ... Setting up libasan5:i386 (8.2.0-9ubuntu1) ... Setting up libitm1:i386 (8.2.0-9ubuntu1) ... Setting up libubsan1:i386 (8.2.0-9ubuntu1) ... Setting up libbinutils:i386 (2.31.1-7ubuntu1) ... Setting up libperl5.28:i386 (5.28.0-3) ... Setting up perl (5.28.0-3) ... Setting up binutils-i686-linux-gnu (2.31.1-7ubuntu1) ... Setting up libgcc-8-dev:i386 (8.2.0-9ubuntu1) ... Setting up binutils (2.31.1-7ubuntu1) ... Setting up libstdc++-8-dev:i386 (8.2.0-9ubuntu1) ... Setting up gcc-8 (8.2.0-9ubuntu1) ... Setting up g++-8 (8.2.0-9ubuntu1) ... Setting up gcc (4:8.2.0-2ubuntu2) ... Setting up g++ (4:8.2.0-2ubuntu2) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-15606673 i386 disco-proposed -c chroot:build-PACKAGEBUILD-15606673 --arch=i386 --dist=disco-proposed --nolog python-biom-format_2.1.6+dfsg-2ubuntu2.dsc Initiating build PACKAGEBUILD-15606673 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-138-generic #164-Ubuntu SMP Tue Oct 2 17:16:02 UTC 2018 i686 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-015.buildd +==============================================================================+ | python-biom-format 2.1.6+dfsg-2ubuntu2 (i386) 03 Nov 2018 16:41 | +==============================================================================+ Package: python-biom-format Version: 2.1.6+dfsg-2ubuntu2 Source Version: 2.1.6+dfsg-2ubuntu2 Distribution: disco-proposed Machine Architecture: amd64 Host Architecture: i386 Build Architecture: i386 I: NOTICE: Log filtering will replace 'build/python-biom-format-W9kB7F/python-biom-format-2.1.6+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/python-biom-format-W9kB7F' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-15606673/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- python-biom-format_2.1.6+dfsg-2ubuntu2.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-CpOqLm/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-CpOqLm/apt_archive ./ InRelease Get:2 copy:/<>/resolver-CpOqLm/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-CpOqLm/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-CpOqLm/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-CpOqLm/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (123 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-CpOqLm/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14533 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11~), dh-python, cython, python-dev, python-numpy, python-scipy, python-h5py, help2man, python-click, python-cogent, python-future, python-nose, python-pandas, python-setuptools, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx Filtered Build-Depends: debhelper (>= 11~), dh-python, cython, python-dev, python-numpy, python-scipy, python-h5py, help2man, python-click, python-cogent, python-future, python-nose, python-pandas, python-setuptools, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx dpkg-deb: building package 'sbuild-build-depends-python-biom-format-dummy' in '/<>/resolver-5DHoDF/apt_archive/sbuild-build-depends-python-biom-format-dummy.deb'. Ign:1 copy:/<>/resolver-5DHoDF/apt_archive ./ InRelease Get:2 copy:/<>/resolver-5DHoDF/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-5DHoDF/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-5DHoDF/apt_archive ./ Sources [333 B] Get:5 copy:/<>/resolver-5DHoDF/apt_archive ./ Packages [658 B] Fetched 3110 B in 0s (207 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install python-biom-format build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bash-completion bsdmainutils cython cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-lyx gettext gettext-base groff-base help2man intltool-debian libaec0 libarchive-zip-perl libblas3 libbsd0 libcroco3 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfreetype6 libgfortran5 libglib2.0-0 libhdf5-100 libicu60 libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 liblocale-gettext-perl libmagic-mgc libmagic1 libmpdec2 libpipeline1 libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libsz2 libtimedate-perl libtool libxml2 m4 man-db mime-support po-debconf python python-babel-localedata python-backports.functools-lru-cache python-click python-cogent python-colorama python-configparser python-cycler python-dateutil python-decorator python-dev python-future python-h5py python-kiwisolver python-matplotlib python-matplotlib-data python-minimal python-nose python-numpy python-pandas python-pandas-lib python-pkg-resources python-pyparsing python-scipy python-setuptools python-six python-subprocess32 python-tz python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-alabaster python3-all python3-all-dev python3-babel python3-certifi python3-chardet python3-click python3-colorama python3-dateutil python3-decorator python3-dev python3-distutils python3-docutils python3-future python3-h5py python3-idna python3-imagesize python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal python3-nose python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pkg-resources python3-pygments python3-pyparsing python3-requests python3-roman python3-scipy python3-setuptools python3-six python3-sphinx python3-tz python3-urllib3 python3.7 python3.7-dev python3.7-minimal sgml-base sphinx-common ttf-bitstream-vera xml-core Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cython-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libjs-jquery-ui-docs libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python-doc python-tk python-cogent-doc cdbfasta clustalw fasttree infernal mafft mothur parsinsert raxml rdp-classifier rtax python-cycler-doc python-future-doc python-h5py-doc dvipng ffmpeg gir1.2-gtk-3.0 ghostscript inkscape ipython librsvg2-common python-cairocffi python-configobj python-excelerator python-gobject python-matplotlib-doc python-qt4 python-sip python-tornado python-traits python-wxgtk3.0 texlive-extra-utils texlive-latex-extra ttf-staypuft python-coverage python-nose-doc gfortran python-numpy-dbg python-numpy-doc python-pandas-doc python-pyparsing-doc python-scipy-doc python-setuptools-doc python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python-jinja2-doc python3-numpy-dbg python-pygments-doc python3-cryptography python3-openssl python3-socks imagemagick-6.q16 latexmk libjs-mathjax python3-sphinx-rtd-theme python3-stemmer sphinx-doc texlive-fonts-recommended texlive-generic-extra python3.7-venv python3.7-doc sgml-base-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common libltdl-dev libmail-sendmail-perl blast2 cd-hit clearcut dialign muscle python-pil python-tk python-tables python-numexpr python-xlrd python-statsmodels python-openpyxl python-xlwt python-bs4 python-html5lib python-lxml libpaper-utils python3-pil python3-matplotlib python3-numexpr python3-tables python3-bs4 python3-html5lib python3-lxml The following NEW packages will be installed: autoconf automake autopoint autotools-dev bash-completion bsdmainutils cython cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-lyx gettext gettext-base groff-base help2man intltool-debian libaec0 libarchive-zip-perl libblas3 libbsd0 libcroco3 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfreetype6 libgfortran5 libglib2.0-0 libhdf5-100 libicu60 libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 liblocale-gettext-perl libmagic-mgc libmagic1 libmpdec2 libpipeline1 libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libsz2 libtimedate-perl libtool libxml2 m4 man-db mime-support po-debconf python python-babel-localedata python-backports.functools-lru-cache python-click python-cogent python-colorama python-configparser python-cycler python-dateutil python-decorator python-dev python-future python-h5py python-kiwisolver python-matplotlib python-matplotlib-data python-minimal python-nose python-numpy python-pandas python-pandas-lib python-pkg-resources python-pyparsing python-scipy python-setuptools python-six python-subprocess32 python-tz python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-alabaster python3-all python3-all-dev python3-babel python3-certifi python3-chardet python3-click python3-colorama python3-dateutil python3-decorator python3-dev python3-distutils python3-docutils python3-future python3-h5py python3-idna python3-imagesize python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal python3-nose python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pkg-resources python3-pygments python3-pyparsing python3-requests python3-roman python3-scipy python3-setuptools python3-six python3-sphinx python3-tz python3-urllib3 python3.7 python3.7-dev python3.7-minimal sbuild-build-depends-python-biom-format-dummy sgml-base sphinx-common ttf-bitstream-vera xml-core 0 upgraded, 149 newly installed, 0 to remove and 0 not upgraded. Need to get 171 MB of archives. After this operation, 538 MB of additional disk space will be used. Get:1 copy:/<>/resolver-5DHoDF/apt_archive ./ sbuild-build-depends-python-biom-format-dummy 0.invalid.0 [984 B] Get:2 http://ftpmaster.internal/ubuntu disco-proposed/main i386 liblocale-gettext-perl i386 1.07-3build3 [16.8 kB] Get:3 http://ftpmaster.internal/ubuntu disco/main i386 libpython3.7-minimal i386 3.7.1-1 [546 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main i386 libexpat1 i386 2.2.6-1 [84.8 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main i386 python3.7-minimal i386 3.7.1-1 [1690 kB] Get:6 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3-minimal i386 3.7.1-1ubuntu1 [23.6 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main i386 mime-support all 3.60ubuntu1 [30.1 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main i386 libmpdec2 i386 2.4.2-2 [80.0 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main i386 libpython3.7-stdlib i386 3.7.1-1 [1750 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main i386 python3.7 i386 3.7.1-1 [272 kB] Get:11 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http://ftpmaster.internal/ubuntu disco-proposed/main i386 automake all 1:1.16.1-3 [522 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main i386 autopoint all 0.19.8.1-8 [412 kB] Get:44 http://ftpmaster.internal/ubuntu disco/universe i386 cython i386 0.28.4-1 [1864 kB] Get:45 http://ftpmaster.internal/ubuntu disco/universe i386 cython3 i386 0.28.4-1 [2546 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main i386 libtool all 2.4.6-4 [196 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main i386 dh-autoreconf all 19 [16.1 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main i386 libarchive-zip-perl all 1.63-1 [84.8 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main i386 libfile-stripnondeterminism-perl all 0.042-1 [15.2 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main i386 libtimedate-perl all 2.3000-2 [37.5 kB] Get:51 http://ftpmaster.internal/ubuntu disco/main i386 dh-strip-nondeterminism all 0.042-1 [5188 B] Get:52 http://ftpmaster.internal/ubuntu disco/main i386 dwz i386 0.12-2 [80.4 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main i386 libcroco3 i386 0.6.12-2 [87.7 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main i386 gettext i386 0.19.8.1-8 [904 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main i386 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main i386 po-debconf all 1.0.20 [232 kB] Get:57 http://ftpmaster.internal/ubuntu disco/main i386 debhelper all 11.3.2ubuntu1 [883 kB] Get:58 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3-lib2to3 all 3.7.1-1ubuntu2 [74.2 kB] Get:59 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3-distutils all 3.7.1-1ubuntu2 [139 kB] Get:60 http://ftpmaster.internal/ubuntu disco/main i386 dh-python all 3.20180927ubuntu1 [91.0 kB] Get:61 http://ftpmaster.internal/ubuntu disco/main i386 xml-core all 0.18 [21.3 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main i386 docutils-common all 0.14+dfsg-3 [156 kB] Get:63 http://ftpmaster.internal/ubuntu disco/universe i386 fonts-lyx all 2.3.0-2 [154 kB] Get:64 http://ftpmaster.internal/ubuntu disco/universe i386 help2man i386 1.47.6 [162 kB] Get:65 http://ftpmaster.internal/ubuntu disco/universe i386 libaec0 i386 1.0.2-1 [21.6 kB] Get:66 http://ftpmaster.internal/ubuntu disco/main i386 libblas3 i386 3.8.0-1build1 [131 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main i386 libexpat1-dev i386 2.2.6-1 [137 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main i386 libfreetype6 i386 2.8.1-2ubuntu2 [351 kB] Get:69 http://ftpmaster.internal/ubuntu disco/main i386 libgfortran5 i386 8.2.0-9ubuntu1 [556 kB] Get:70 http://ftpmaster.internal/ubuntu disco/universe i386 libsz2 i386 1.0.2-1 [5196 B] Get:71 http://ftpmaster.internal/ubuntu disco/universe i386 libhdf5-100 i386 1.10.0-patch1+docs-4build2 [1230 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main i386 libjs-jquery all 3.2.1-1 [152 kB] Get:73 http://ftpmaster.internal/ubuntu disco/universe i386 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main i386 libjs-underscore all 1.8.3~dfsg-1 [59.9 kB] Get:75 http://ftpmaster.internal/ubuntu disco/main i386 libjs-sphinxdoc all 1.7.9-1 [92.3 kB] Get:76 http://ftpmaster.internal/ubuntu disco/main i386 liblapack3 i386 3.8.0-1build1 [1961 kB] Get:77 http://ftpmaster.internal/ubuntu disco/main i386 libpython2.7 i386 2.7.15-4ubuntu4 [1056 kB] Get:78 http://ftpmaster.internal/ubuntu disco/main i386 libpython2.7-dev i386 2.7.15-4ubuntu4 [31.3 MB] Get:79 http://ftpmaster.internal/ubuntu disco/main i386 libpython2-dev i386 2.7.15-3 [7800 B] Get:80 http://ftpmaster.internal/ubuntu disco/main i386 libpython-dev i386 2.7.15-3 [5896 B] Get:81 http://ftpmaster.internal/ubuntu disco/main i386 libpython3.7 i386 3.7.1-1 [1504 kB] Get:82 http://ftpmaster.internal/ubuntu disco/main i386 libpython3.7-dev i386 3.7.1-1 [47.6 MB] Get:83 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libpython3-dev i386 3.7.1-1ubuntu1 [7252 B] Get:84 http://ftpmaster.internal/ubuntu disco-proposed/main i386 libpython3-all-dev i386 3.7.1-1ubuntu1 [1112 B] Get:85 http://ftpmaster.internal/ubuntu disco/main i386 python-babel-localedata all 2.6.0+dfsg.1-1 [4071 kB] Get:86 http://ftpmaster.internal/ubuntu disco/universe i386 python-backports.functools-lru-cache all 1.5-1 [6172 B] Get:87 http://ftpmaster.internal/ubuntu disco/main i386 python-colorama all 0.3.7-1 [22.6 kB] Get:88 http://ftpmaster.internal/ubuntu disco/main i386 python-click all 6.7+git20180829-1 [62.5 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main i386 python-configparser all 3.5.0b2-1 [59.3 kB] Get:90 http://ftpmaster.internal/ubuntu disco/main i386 python-six all 1.11.0-2 [11.3 kB] Get:91 http://ftpmaster.internal/ubuntu disco/universe i386 python-cycler all 0.10.0-1 [7520 B] Get:92 http://ftpmaster.internal/ubuntu disco/main i386 python-dateutil all 2.6.1-1 [60.6 kB] Get:93 http://ftpmaster.internal/ubuntu disco/main i386 python-decorator all 4.3.0-1 [9368 B] Get:94 http://ftpmaster.internal/ubuntu disco/main i386 python2.7-dev i386 2.7.15-4ubuntu4 [277 kB] Get:95 http://ftpmaster.internal/ubuntu disco/main i386 python2-dev i386 2.7.15-3 [1236 B] Get:96 http://ftpmaster.internal/ubuntu disco/main i386 python-dev i386 2.7.15-3 [1216 B] Get:97 http://ftpmaster.internal/ubuntu disco/main i386 python-future all 0.15.2-5 [335 kB] Get:98 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python-numpy i386 1:1.14.5-1ubuntu7 [2005 kB] Get:99 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 python-h5py i386 2.8.0-1build1 [598 kB] Get:100 http://ftpmaster.internal/ubuntu disco/main i386 python-pkg-resources all 40.2.0-1 [128 kB] Get:101 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 python-kiwisolver i386 1.0.1-2build2 [70.6 kB] Get:102 http://ftpmaster.internal/ubuntu disco/universe i386 ttf-bitstream-vera all 1.10-8 [352 kB] Get:103 http://ftpmaster.internal/ubuntu disco/universe i386 python-matplotlib-data all 2.2.2-4build1 [3775 kB] Get:104 http://ftpmaster.internal/ubuntu disco/main i386 python-pyparsing all 2.2.0+dfsg1-2 [52.1 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main i386 python-tz all 2018.5-1 [31.5 kB] Get:106 http://ftpmaster.internal/ubuntu disco/universe i386 python-subprocess32 i386 3.5.2-1 [26.8 kB] Get:107 http://ftpmaster.internal/ubuntu disco/universe i386 python-matplotlib i386 2.2.2-4build1 [4237 kB] Get:108 http://ftpmaster.internal/ubuntu disco/universe i386 python-nose all 1.3.7-4 [116 kB] Get:109 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 python-pandas-lib i386 0.23.3-1fakesync1ubuntu2 [2878 kB] Get:110 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 python-pandas all 0.23.3-1fakesync1ubuntu2 [1730 kB] Get:111 http://ftpmaster.internal/ubuntu disco/main i386 python-setuptools all 40.2.0-1 [331 kB] Get:112 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3-all i386 3.7.1-1ubuntu1 [1108 B] Get:113 http://ftpmaster.internal/ubuntu disco/main i386 python3.7-dev i386 3.7.1-1 [521 kB] Get:114 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3-dev i386 3.7.1-1ubuntu1 [1304 B] Get:115 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3-all-dev i386 3.7.1-1ubuntu1 [1112 B] Get:116 http://ftpmaster.internal/ubuntu disco/main i386 python3-pkg-resources all 40.2.0-1 [99.1 kB] Get:117 http://ftpmaster.internal/ubuntu disco/main i386 python3-tz all 2018.5-1 [24.9 kB] Get:118 http://ftpmaster.internal/ubuntu disco/main i386 python3-babel all 2.6.0+dfsg.1-1 [83.4 kB] Get:119 http://ftpmaster.internal/ubuntu disco/main i386 python3-certifi all 2018.8.24-1 [140 kB] Get:120 http://ftpmaster.internal/ubuntu disco/main i386 python3-chardet all 3.0.4-1 [80.3 kB] Get:121 http://ftpmaster.internal/ubuntu disco/main i386 python3-colorama all 0.3.7-1 [14.9 kB] Get:122 http://ftpmaster.internal/ubuntu disco/main i386 python3-click all 6.7+git20180829-1 [62.6 kB] Get:123 http://ftpmaster.internal/ubuntu disco/main i386 python3-six all 1.11.0-2 [11.4 kB] Get:124 http://ftpmaster.internal/ubuntu disco/main i386 python3-dateutil all 2.6.1-1 [52.3 kB] Get:125 http://ftpmaster.internal/ubuntu disco/main i386 python3-decorator all 4.3.0-1 [9428 B] Get:126 http://ftpmaster.internal/ubuntu disco/main i386 python3-roman all 2.0.0-3 [8624 B] Get:127 http://ftpmaster.internal/ubuntu disco/main i386 python3-docutils all 0.14+dfsg-3 [363 kB] Get:128 http://ftpmaster.internal/ubuntu disco/universe i386 python3-future all 0.15.2-5 [333 kB] Get:129 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3-numpy i386 1:1.14.5-1ubuntu7 [2014 kB] Get:130 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 python3-h5py i386 2.8.0-1build1 [614 kB] Get:131 http://ftpmaster.internal/ubuntu disco/main i386 python3-idna all 2.6-1 [32.5 kB] Get:132 http://ftpmaster.internal/ubuntu disco/main i386 python3-imagesize all 1.0.0-1 [5004 B] Get:133 http://ftpmaster.internal/ubuntu disco-proposed/main i386 python3-markupsafe i386 1.0-1build3 [13.7 kB] Get:134 http://ftpmaster.internal/ubuntu disco/main i386 python3-jinja2 all 2.10-1 [95.2 kB] Get:135 http://ftpmaster.internal/ubuntu disco/universe i386 python3-nose all 1.3.7-4 [116 kB] Get:136 http://ftpmaster.internal/ubuntu disco/main i386 python3-pyparsing all 2.2.0+dfsg1-2 [52.2 kB] Get:137 http://ftpmaster.internal/ubuntu disco/main i386 python3-packaging all 17.1-1 [18.2 kB] Get:138 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 python3-pandas-lib i386 0.23.3-1fakesync1ubuntu2 [2877 kB] Get:139 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 python3-pandas all 0.23.3-1fakesync1ubuntu2 [1729 kB] Get:140 http://ftpmaster.internal/ubuntu disco/main i386 python3-pygments all 2.2.0+dfsg-2 [574 kB] Get:141 http://ftpmaster.internal/ubuntu disco/main i386 python3-urllib3 all 1.22-1 [85.2 kB] Get:142 http://ftpmaster.internal/ubuntu disco/main i386 python3-requests all 2.18.4-2ubuntu0.18.10.1 [58.3 kB] Get:143 http://ftpmaster.internal/ubuntu disco/main i386 python3-setuptools all 40.2.0-1 [248 kB] Get:144 http://ftpmaster.internal/ubuntu disco/main i386 sphinx-common all 1.7.9-1 [437 kB] Get:145 http://ftpmaster.internal/ubuntu disco/main i386 python3-alabaster all 0.7.8-1 [18.5 kB] Get:146 http://ftpmaster.internal/ubuntu disco/main i386 python3-sphinx all 1.7.9-1 [449 kB] Get:147 http://ftpmaster.internal/ubuntu disco/universe i386 python-cogent i386 1.9-12 [2440 kB] Get:148 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 python-scipy i386 1.1.0-1ubuntu2 [9340 kB] Get:149 http://ftpmaster.internal/ubuntu disco-proposed/universe i386 python3-scipy i386 1.1.0-1ubuntu2 [9295 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 171 MB in 12s (14.7 MB/s) Selecting previously unselected package liblocale-gettext-perl. 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Preparing to unpack .../123-sbuild-build-depends-python-biom-format-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-python-biom-format-dummy (0.invalid.0) ... Setting up libjs-jquery (3.2.1-1) ... Setting up libaec0:i386 (1.0.2-1) ... Setting up libicu60:i386 (60.2-6ubuntu1) ... Setting up libarchive-zip-perl (1.63-1) ... Setting up libjs-underscore (1.8.3~dfsg-1) ... Setting up mime-support (3.60ubuntu1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsigsegv2:i386 (2.12-2) ... Setting up bash-completion (1:2.8-1ubuntu1) ... Setting up libelf1:i386 (0.170-0.5.0ubuntu1) ... Setting up groff-base (1.22.3-10) ... Setting up libglib2.0-0:i386 (2.58.1-2) ... No schema files found: doing nothing. Setting up libjs-sphinxdoc (1.7.9-1) ... Setting up gettext-base (0.19.8.1-8) ... Setting up libpipeline1:i386 (1.5.0-1) ... Setting up m4 (1.4.18-1ubuntu1) ... Setting up sgml-base (1.29) ... Setting up libbsd0:i386 (0.9.1-1) ... Setting up libxml2:i386 (2.9.4+dfsg1-7ubuntu2) ... Setting up libfreetype6:i386 (2.8.1-2ubuntu2) ... Setting up libmagic-mgc (1:5.34-2) ... Setting up libmagic1:i386 (1:5.34-2) ... Setting up libcroco3:i386 (0.6.12-2) ... Setting up libblas3:i386 (3.8.0-1build1) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up dwz (0.12-2) ... Setting up autotools-dev (20180224.1) ... Setting up python-babel-localedata (2.6.0+dfsg.1-1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up sphinx-common (1.7.9-1) ... Setting up liblocale-gettext-perl (1.07-3build3) ... Setting up libexpat1-dev:i386 (2.2.6-1) ... Setting up ttf-bitstream-vera (1.10-8) ... Setting up xml-core (0.18) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgfortran5:i386 (8.2.0-9ubuntu1) ... Setting up libpython2.7-stdlib:i386 (2.7.15-4ubuntu4) ... Setting up autopoint (0.19.8.1-8) ... Setting up libmpdec2:i386 (2.4.2-2) ... Setting up fonts-lyx (2.3.0-2) ... Setting up libsz2:i386 (1.0.2-1) ... Setting up libfile-stripnondeterminism-perl (0.042-1) ... Setting up libpython3.7-stdlib:i386 (3.7.1-1) ... Setting up libhdf5-100:i386 (1.10.0-patch1+docs-4build2) ... Setting up python-matplotlib-data (2.2.2-4build1) ... Setting up gettext (0.19.8.1-8) ... Setting up liblapack3:i386 (3.8.0-1build1) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up python2.7 (2.7.15-4ubuntu4) ... Setting up python3.7 (3.7.1-1) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.34-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libpython3.7:i386 (3.7.1-1) ... Setting up libpython2.7:i386 (2.7.15-4ubuntu4) ... Setting up automake (1:1.16.1-3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up help2man (1.47.6) ... Setting up libpython3.7-dev:i386 (3.7.1-1) ... Setting up man-db (2.8.4-2build1) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython2-stdlib:i386 (2.7.15-3) ... Setting up libpython2.7-dev:i386 (2.7.15-4ubuntu4) ... Setting up python2.7-dev (2.7.15-4ubuntu4) ... Setting up libpython3-dev:i386 (3.7.1-1ubuntu1) ... Setting up libtool (2.4.6-4) ... Setting up libpython3-stdlib:i386 (3.7.1-1ubuntu1) ... Setting up po-debconf (1.0.20) ... Setting up python3 (3.7.1-1ubuntu1) ... Setting up python3-numpy (1:1.14.5-1ubuntu7) ... Setting up python3-alabaster (0.7.8-1) ... Setting up python3-idna (2.6-1) ... Setting up python3-six (1.11.0-2) ... Setting up python3-colorama (0.3.7-1) ... Setting up python3-pyparsing (2.2.0+dfsg1-2) ... Setting up python3-certifi (2018.8.24-1) ... Setting up python3-pkg-resources (40.2.0-1) ... Setting up python3.7-dev (3.7.1-1) ... Setting up python2 (2.7.15-3) ... Setting up python3-markupsafe (1.0-1build3) ... Setting up python3-pandas-lib (0.23.3-1fakesync1ubuntu2) ... Setting up libpython2-dev:i386 (2.7.15-3) ... Setting up libpython-stdlib:i386 (2.7.15-3) ... Setting up libpython3-all-dev:i386 (3.7.1-1ubuntu1) ... Setting up python3-nose (1.3.7-4) ... Setting up python3-chardet (3.0.4-1) ... Setting up python3-jinja2 (2.10-1) ... Setting up python2-dev (2.7.15-3) ... Setting up cython3 (0.28.4-1) ... Setting up python3-urllib3 (1.22-1) ... Setting up python3-packaging (17.1-1) ... Setting up python3-lib2to3 (3.7.1-1ubuntu2) ... Setting up python3-decorator (4.3.0-1) ... Setting up python3-tz (2018.5-1) ... Setting up python3-distutils (3.7.1-1ubuntu2) ... Setting up python (2.7.15-3) ... Setting up python3-dateutil (2.6.1-1) ... Setting up python3-h5py (2.8.0-1build1) ... Setting up python-pyparsing (2.2.0+dfsg1-2) ... Setting up python3-pygments (2.2.0+dfsg-2) ... Setting up libpython-dev:i386 (2.7.15-3) ... Setting up python3-roman (2.0.0-3) ... Setting up python3-scipy (1.1.0-1ubuntu2) ... Setting up python3-imagesize (1.0.0-1) ... Setting up python-backports.functools-lru-cache (1.5-1) ... Setting up python-dev (2.7.15-3) ... Setting up python3-click (6.7+git20180829-1) ... Setting up python-tz (2018.5-1) ... Setting up python-colorama (0.3.7-1) ... Setting up python-pkg-resources (40.2.0-1) ... Setting up python-numpy (1:1.14.5-1ubuntu7) ... Setting up cython (0.28.4-1) ... Setting up python3-babel (2.6.0+dfsg.1-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python-configparser (3.5.0b2-1) ... Setting up python-six (1.11.0-2) ... Setting up python3-future (0.15.2-5) ... update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python-pandas-lib (0.23.3-1fakesync1ubuntu2) ... Setting up python3-requests (2.18.4-2ubuntu0.18.10.1) ... Setting up python-decorator (4.3.0-1) ... Setting up python3-pandas (0.23.3-1fakesync1ubuntu2) ... Setting up python-subprocess32 (3.5.2-1) ... Setting up python3-setuptools (40.2.0-1) ... Setting up dh-python (3.20180927ubuntu1) ... Setting up python-nose (1.3.7-4) ... Setting up python-future (0.15.2-5) ... Setting up python-setuptools (40.2.0-1) ... Setting up python-h5py (2.8.0-1build1) ... Setting up python-kiwisolver (1.0.1-2build2) ... Setting up python-scipy (1.1.0-1ubuntu2) ... Setting up python-click (6.7+git20180829-1) ... Setting up python3-dev (3.7.1-1ubuntu1) ... Setting up python-cycler (0.10.0-1) ... Setting up python-dateutil (2.6.1-1) ... Setting up python3-all (3.7.1-1ubuntu1) ... Setting up python3-all-dev (3.7.1-1ubuntu1) ... Setting up python-pandas (0.23.3-1fakesync1ubuntu2) ... Setting up python-matplotlib (2.2.2-4build1) ... Setting up python-cogent (1.9-12) ... Processing triggers for sgml-base (1.29) ... Setting up docutils-common (0.14+dfsg-3) ... Processing triggers for sgml-base (1.29) ... Setting up python3-docutils (0.14+dfsg-3) ... update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python3-sphinx (1.7.9-1) ... update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (0.042-1) ... Setting up debhelper (11.3.2ubuntu1) ... Setting up sbuild-build-depends-python-biom-format-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-138-generic amd64 (i686) Toolchain package versions: binutils_2.31.1-7ubuntu1 dpkg-dev_1.19.0.5ubuntu5 g++-8_8.2.0-9ubuntu1 gcc-8_8.2.0-9ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-9ubuntu1 libstdc++6_8.2.0-9ubuntu1 linux-libc-dev_4.18.0-11.12 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.7.0 autoconf_2.69-11 automake_1:1.16.1-3 autopoint_0.19.8.1-8 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_4.4.18-2ubuntu3 bash-completion_1:2.8-1ubuntu1 binutils_2.31.1-7ubuntu1 binutils-common_2.31.1-7ubuntu1 binutils-i686-linux-gnu_2.31.1-7ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.32-0.1ubuntu2 build-essential_12.5ubuntu2 bzip2_1.0.6-9 ca-certificates_20180409 coreutils_8.28-1ubuntu2 cpp_4:8.2.0-2ubuntu2 cpp-8_8.2.0-9ubuntu1 cython_0.28.4-1 cython3_0.28.4-1 dash_0.5.8-2.10 debconf_1.5.69 debhelper_11.3.2ubuntu1 debianutils_4.8.6 dh-autoreconf_19 dh-python_3.20180927ubuntu1 dh-strip-nondeterminism_0.042-1 diffutils_1:3.6-1 dmsetup_2:1.02.145-4.1ubuntu4 docutils-common_0.14+dfsg-3 dpkg_1.19.0.5ubuntu5 dpkg-dev_1.19.0.5ubuntu5 dwz_0.12-2 e2fslibs_1.44.4-2 e2fsprogs_1.44.4-2 fakeroot_1.22-2ubuntu1 fdisk_2.32-0.1ubuntu2 file_1:5.34-2 findutils_4.6.0+git+20180808-2 fonts-lyx_2.3.0-2 g++_4:8.2.0-2ubuntu2 g++-8_8.2.0-9ubuntu1 gcc_4:8.2.0-2ubuntu2 gcc-8_8.2.0-9ubuntu1 gcc-8-base_8.2.0-9ubuntu1 gettext_0.19.8.1-8 gettext-base_0.19.8.1-8 gpg_2.2.8-3ubuntu1 gpg-agent_2.2.8-3ubuntu1 gpgconf_2.2.8-3ubuntu1 gpgv_2.2.8-3ubuntu1 grep_3.1-2ubuntu1 groff-base_1.22.3-10 gzip_1.6-5ubuntu2 help2man_1.47.6 hostname_3.20 init_1.54 init-system-helpers_1.54 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libaec0_1.0.2-1 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libsqlite3-0_3.24.0-1 libss2_1.44.4-2 libssl1.1_1.1.1-1ubuntu2 libstdc++-8-dev_8.2.0-9ubuntu1 libstdc++6_8.2.0-9ubuntu1 libsystemd0_239-7ubuntu10 libsz2_1.0.2-1 libtasn1-6_4.13-3 libtimedate-perl_2.3000-2 libtinfo6_6.1+20180210-4ubuntu1 libtool_2.4.6-4 libubsan1_8.2.0-9ubuntu1 libudev1_239-7ubuntu10 libunistring2_0.9.10-1ubuntu1 libusb-0.1-4_2:0.1.12-32 libuuid1_2.32-0.1ubuntu2 libxml2_2.9.4+dfsg1-7ubuntu2 libzstd1_1.3.5+dfsg-1ubuntu1 linux-libc-dev_4.18.0-11.12 lockfile-progs_0.1.17build1 login_1:4.5-1ubuntu1 lsb-base_9.20170808ubuntu1 m4_1.4.18-1ubuntu1 make_4.2.1-1.2 man-db_2.8.4-2build1 mawk_1.3.3-17ubuntu3 mime-support_3.60ubuntu1 mount_2.32-0.1ubuntu2 multiarch-support_2.28-0ubuntu1 ncurses-base_6.1+20180210-4ubuntu1 ncurses-bin_6.1+20180210-4ubuntu1 openssl_1.1.1-1ubuntu2 optipng_0.7.6-1.1 passwd_1:4.5-1ubuntu1 patch_2.7.6-3 perl_5.28.0-3 perl-base_5.28.0-3 perl-modules-5.26_5.26.2-7 perl-modules-5.28_5.28.0-3 pinentry-curses_1.1.0-1build2 pkgbinarymangler_143 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu1 python_2.7.15-3 python-babel-localedata_2.6.0+dfsg.1-1 python-backports.functools-lru-cache_1.5-1 python-click_6.7+git20180829-1 python-cogent_1.9-12 python-colorama_0.3.7-1 python-configparser_3.5.0b2-1 python-cycler_0.10.0-1 python-dateutil_2.6.1-1 python-decorator_4.3.0-1 python-dev_2.7.15-3 python-future_0.15.2-5 python-h5py_2.8.0-1build1 python-kiwisolver_1.0.1-2build2 python-matplotlib_2.2.2-4build1 python-matplotlib-data_2.2.2-4build1 python-minimal_2.7.15-3 python-nose_1.3.7-4 python-numpy_1:1.14.5-1ubuntu7 python-pandas_0.23.3-1fakesync1ubuntu2 python-pandas-lib_0.23.3-1fakesync1ubuntu2 python-pkg-resources_40.2.0-1 python-pyparsing_2.2.0+dfsg1-2 python-scipy_1.1.0-1ubuntu2 python-setuptools_40.2.0-1 python-six_1.11.0-2 python-subprocess32_3.5.2-1 python-tz_2018.5-1 python2_2.7.15-3 python2-dev_2.7.15-3 python2-minimal_2.7.15-3 python2.7_2.7.15-4ubuntu4 python2.7-dev_2.7.15-4ubuntu4 python2.7-minimal_2.7.15-4ubuntu4 python3_3.7.1-1ubuntu1 python3-alabaster_0.7.8-1 python3-all_3.7.1-1ubuntu1 python3-all-dev_3.7.1-1ubuntu1 python3-babel_2.6.0+dfsg.1-1 python3-certifi_2018.8.24-1 python3-chardet_3.0.4-1 python3-click_6.7+git20180829-1 python3-colorama_0.3.7-1 python3-dateutil_2.6.1-1 python3-decorator_4.3.0-1 python3-dev_3.7.1-1ubuntu1 python3-distutils_3.7.1-1ubuntu2 python3-docutils_0.14+dfsg-3 python3-future_0.15.2-5 python3-h5py_2.8.0-1build1 python3-idna_2.6-1 python3-imagesize_1.0.0-1 python3-jinja2_2.10-1 python3-lib2to3_3.7.1-1ubuntu2 python3-markupsafe_1.0-1build3 python3-minimal_3.7.1-1ubuntu1 python3-nose_1.3.7-4 python3-numpy_1:1.14.5-1ubuntu7 python3-packaging_17.1-1 python3-pandas_0.23.3-1fakesync1ubuntu2 python3-pandas-lib_0.23.3-1fakesync1ubuntu2 python3-pkg-resources_40.2.0-1 python3-pygments_2.2.0+dfsg-2 python3-pyparsing_2.2.0+dfsg1-2 python3-requests_2.18.4-2ubuntu0.18.10.1 python3-roman_2.0.0-3 python3-scipy_1.1.0-1ubuntu2 python3-setuptools_40.2.0-1 python3-six_1.11.0-2 python3-sphinx_1.7.9-1 python3-tz_2018.5-1 python3-urllib3_1.22-1 python3.7_3.7.1-1 python3.7-dev_3.7.1-1 python3.7-minimal_3.7.1-1 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-biom-format-dummy_0.invalid.0 sed_4.5-1 sensible-utils_0.0.12 sgml-base_1.29 sphinx-common_1.7.9-1 systemd_239-7ubuntu10 systemd-sysv_239-7ubuntu10 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-2 ttf-bitstream-vera_1.10-8 tzdata_2018g-1 ubuntu-keyring_2018.09.18.1 util-linux_2.32-0.1ubuntu2 xml-core_0.18 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sat Nov 3 16:37:32 2018 UTC gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./python-biom-format_2.1.6+dfsg-2ubuntu2.dsc dpkg-source: info: extracting python-biom-format in python-biom-format-2.1.6+dfsg dpkg-source: info: unpacking python-biom-format_2.1.6+dfsg.orig.tar.xz dpkg-source: info: unpacking python-biom-format_2.1.6+dfsg-2ubuntu2.debian.tar.xz dpkg-source: info: applying ignore_local_dist-packages.patch dpkg-source: info: applying no-web-adds.patch dpkg-source: info: applying fix_future_import.patch dpkg-source: info: applying enable_sloppy_sphinx_build.patch dpkg-source: info: applying random_seed_for_test.patch dpkg-source: info: applying sphinx_1.6.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-15606673 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-15606673 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-15606673 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package python-biom-format dpkg-buildpackage: info: source version 2.1.6+dfsg-2ubuntu2 dpkg-buildpackage: info: source distribution disco dpkg-source --before-build python-biom-format-2.1.6+dfsg dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --with python2,python3,bash-completion,sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean --test-nose -i python{version} -p 2.7 I: pybuild base:217: python2.7 setup.py clean running clean removing '/<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build' (and everything under it) 'build/bdist.linux-i386' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it pybuild --clean --test-nose -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py clean running clean removing '/<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build' (and everything under it) 'build/bdist.linux-i386' does not exist -- can't clean it 'build/scripts-3.7' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python-biom-format.substvars debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars debian/biom-format-tools.substvars debian/files rm -fr -- debian/python-biom-format/ debian/tmp/ debian/python3-biom-format/ debian/python-biom-format-doc/ debian/biom-format-tools/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch --with python2,python3,bash-completion,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild pybuild --configure --test-nose -i python{version} -p 2.7 I: pybuild base:217: python2.7 setup.py config running config pybuild --configure --test-nose -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/<>/python-biom-format-2.1.6+dfsg' # arch USE_CYTHON=true dh_auto_build pybuild --build --test-nose -i python{version} -p 2.7 I: pybuild base:217: /usr/bin/python setup.py build Compiling biom/_filter.pyx because it changed. Compiling biom/_transform.pyx because it changed. Compiling biom/_subsample.pyx because it changed. [1/3] Cythonizing biom/_filter.pyx [2/3] Cythonizing biom/_subsample.pyx [3/3] Cythonizing biom/_transform.pyx running build running build_py creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/parse.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/exception.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/err.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests copying tests/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests copying tests/test_parse.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests copying tests/test_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests copying tests/test_err.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests copying tests/test_util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_subsetter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_validator.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_head.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/metadata_adder.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_ids.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/installation_informer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_summarizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_subset_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_validate_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_summarize_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_show_install_info.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli copying tests/test_cli/test_add_metadata.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data copying tests/test_data/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data running egg_info creating biom_format.egg-info writing requirements to biom_format.egg-info/requires.txt writing biom_format.egg-info/PKG-INFO writing top-level names to biom_format.egg-info/top_level.txt writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' copying biom/_filter.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_filter.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_subsample.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_subsample.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_transform.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_transform.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets copying biom/assets/exercise_api.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets copying biom/assets/exercise_cli.sh -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets running build_ext building 'biom._filter' extension creating build creating build/temp.linux-i386-2.7 creating build/temp.linux-i386-2.7/biom i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_filter.c -o build/temp.linux-i386-2.7/biom/_filter.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_filter.c:586: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-GfxnPT/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/biom/_filter.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.so building 'biom._transform' extension i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_transform.c -o build/temp.linux-i386-2.7/biom/_transform.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_transform.c:586: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-GfxnPT/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/biom/_transform.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.so building 'biom._subsample' extension i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_subsample.c -o build/temp.linux-i386-2.7/biom/_subsample.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_subsample.c:586: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-GfxnPT/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-2.7/biom/_subsample.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.so pybuild --build --test-nose -i python{version} -p 3.7 I: pybuild base:217: /usr/bin/python3 setup.py build running build running build_py creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/parse.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/exception.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/err.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests copying tests/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests copying tests/test_parse.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests copying tests/test_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests copying tests/test_err.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests copying tests/test_util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/util.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_subsetter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_validator.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_head.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/metadata_adder.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_ids.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/installation_informer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_summarizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_subset_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_validate_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_summarize_table.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_show_install_info.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli copying tests/test_cli/test_add_metadata.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data copying tests/test_data/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data running egg_info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' copying biom/_filter.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_filter.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_subsample.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_subsample.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_transform.c -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_transform.pyx -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom creating /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets copying biom/assets/exercise_api.py -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets copying biom/assets/exercise_cli.sh -> /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets running build_ext building 'biom._filter' extension creating build/temp.linux-i386-3.7 creating build/temp.linux-i386-3.7/biom i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_filter.c -o build/temp.linux-i386-3.7/biom/_filter.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_filter.c:586: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/biom/_filter.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.cpython-37m-i386-linux-gnu.so building 'biom._transform' extension i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_transform.c -o build/temp.linux-i386-3.7/biom/_transform.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_transform.c:586: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/biom/_transform.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.cpython-37m-i386-linux-gnu.so building 'biom._subsample' extension i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_subsample.c -o build/temp.linux-i386-3.7/biom/_subsample.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_subsample.c:586: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/python-biom-format-2.1.6+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.7/biom/_subsample.o -o /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.cpython-37m-i386-linux-gnu.so # indep: PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b html doc build/html Running Sphinx v1.7.9 WARNING: sphinx.ext.pngmath has been deprecated. Please use sphinx.ext.imgmath instead. making output directory... loading pickled environment... not yet created [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst Failed to import 'biom': no module named biom Failed to import 'biom.table': no module named biom.table building [mo]: targets for 0 po files that are out of date building [html]: targets for 12 source files that are out of date updating environment: 12 added, 0 changed, 0 removed reading sources... [ 8%] BIOM_LICENSE reading sources... [ 16%] documentation/adding_metadata reading sources... [ 25%] documentation/biom_conversion reading sources... [ 33%] documentation/biom_format reading sources... [ 41%] documentation/format_versions/biom-1.0 reading sources... [ 50%] documentation/format_versions/biom-2.0 reading sources... [ 58%] documentation/format_versions/biom-2.1 reading sources... [ 66%] documentation/index reading sources... [ 75%] documentation/quick_usage_examples reading sources... [ 83%] documentation/summarizing_biom_tables reading sources... [ 91%] documentation/table_objects reading sources... [100%] index WARNING: autodoc: failed to import module 'biom'; the following exception was raised: No module named 'biom._filter' WARNING: autodoc: failed to import module 'biom.table'; the following exception was raised: No module named 'biom._filter' looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 8%] BIOM_LICENSE writing output... [ 16%] documentation/adding_metadata writing output... [ 25%] documentation/biom_conversion writing output... [ 33%] documentation/biom_format writing output... [ 41%] documentation/format_versions/biom-1.0 writing output... [ 50%] documentation/format_versions/biom-2.0 writing output... [ 58%] documentation/format_versions/biom-2.1 writing output... [ 66%] documentation/index writing output... [ 75%] documentation/quick_usage_examples writing output... [ 83%] documentation/summarizing_biom_tables writing output... [ 91%] documentation/table_objects writing output... [100%] index /<>/python-biom-format-2.1.6+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated /<>/python-biom-format-2.1.6+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated /<>/python-biom-format-2.1.6+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated /<>/python-biom-format-2.1.6+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated generating indices... writing additional pages... search copying images... [100%] _static/biom-format.png copying static files... done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 7 warnings. The HTML pages are in build/html. PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b man doc build/man Running Sphinx v1.7.9 WARNING: sphinx.ext.pngmath has been deprecated. Please use sphinx.ext.imgmath instead. making output directory... loading pickled environment... not yet created [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst Failed to import 'biom': no module named biom Failed to import 'biom.table': no module named biom.table building [mo]: targets for 0 po files that are out of date building [man]: all manpages updating environment: 12 added, 0 changed, 0 removed reading sources... [ 8%] BIOM_LICENSE reading sources... [ 16%] documentation/adding_metadata reading sources... [ 25%] documentation/biom_conversion reading sources... [ 33%] documentation/biom_format reading sources... [ 41%] documentation/format_versions/biom-1.0 reading sources... [ 50%] documentation/format_versions/biom-2.0 reading sources... [ 58%] documentation/format_versions/biom-2.1 reading sources... [ 66%] documentation/index reading sources... [ 75%] documentation/quick_usage_examples reading sources... [ 83%] documentation/summarizing_biom_tables reading sources... [ 91%] documentation/table_objects reading sources... [100%] index WARNING: autodoc: failed to import module 'biom'; the following exception was raised: No module named 'biom._filter' WARNING: autodoc: failed to import module 'biom.table'; the following exception was raised: No module named 'biom._filter' looking for now-outdated files... none found pickling environment... done checking consistency... done writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/format_versions/biom-2.1 documentation/quick_usage_examples documentation/table_objects documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE } build succeeded, 3 warnings. The manual pages are in build/man. make[1]: Leaving directory '/<>/python-biom-format-2.1.6+dfsg' dh_auto_test -a -O--buildsystem=pybuild pybuild --test --test-nose -i python{version} -p 2.7 I: pybuild pybuild:269: cp -r /<>/python-biom-format-2.1.6+dfsg/examples /<>/python-biom-format-2.1.6+dfsg/tests /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build I: pybuild base:217: cd /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build; python2.7 -m nose -v tests Correctly adds observation metadata without casting it. ... ok Correctly adds observation metadata with casting. ... ok Correctly adds sample metadata without casting it. ... ok Correctly adds sample metadata with casting. ... ok test_default (tests.test_cli.test_show_install_info.TestShowInstallInfo) ... ok Correctly raises politically correct error upon invalid input. ... ok Correctly subsets observations in a table. ... ok Correctly subsets samples in a hdf5 table ... ok Correctly subsets samples in a table. ... ok Correctly subsets samples in a hdf5 table ... ok TableSummarizer functions as expected ... ok TableSummarizer functions as expected with qualitative=True ... ok Correctly converts biom to classic. ... ok Correctly converts biom to classic with metadata renaming. ... ok Correctly converts classic to biom. ... ok Correctly converts classic to biom with metadata. ... ok Correctly converts json to HDF5 changing the observation metadata ... ok Correctly converts json to HDF5 changing the sample metadata ... ok test_bad_inputs (tests.test_cli.test_table_normalizer.TableNormalizerTests) ... ok test_basic (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_basic_w_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_missing_id (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_no_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc_w_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok Correctly invalidates a table that is... invalid. ... ok Test an invalid HDF5 table ... ok Correctly validates a table that is indeed... valid. ... ok validates table:columns: fields ... ok validates data: fields ... ok Make sure we have a datetime stamp ... ok Takes a dense matrix field and validates ... ok Should match format string ... ok validates format url ... ok Should have some string for generated by ... ok Test a valid HDF5 table ... ok test_valid_hdf5_metadata_v200 (tests.test_cli.test_validate_table.TableValidatorTests) ... ok test_valid_hdf5_metadata_v210 (tests.test_cli.test_validate_table.TableValidatorTests) ... ok Make sure we have a valid matrix type ... ok Make sure we have a valid matrix type ... ok Can be nullable or an object ... ok Should just work. ... ok validates rows: field ... ok validates shape information ... ok Takes a sparse matrix field and validates ... ok Should be valid table type ... ok test_test_empty (tests.test_err.ErrModeTests) ... ok test_test_obsdup (tests.test_err.ErrModeTests) ... ok test_test_obsmdsize (tests.test_err.ErrModeTests) ... ok test_test_obssize (tests.test_err.ErrModeTests) ... ok test_test_sampdup (tests.test_err.ErrModeTests) ... ok test_test_sampmdsize (tests.test_err.ErrModeTests) ... ok test_test_sampsize (tests.test_err.ErrModeTests) ... ok test_contains (tests.test_err.ErrorProfileTests) ... ok test_getcall (tests.test_err.ErrorProfileTests) ... ok test_handle_error (tests.test_err.ErrorProfileTests) ... ok test_register_unregister (tests.test_err.ErrorProfileTests) ... ok test_setcall (tests.test_err.ErrorProfileTests) ... ok test_state (tests.test_err.ErrorProfileTests) ... ok test_test (tests.test_err.ErrorProfileTests) ... ok test_errcheck (tests.test_err.SupportTests) ... ok test_errstate (tests.test_err.SupportTests) ... ok test_geterr (tests.test_err.SupportTests) ... ok test_geterrcall (tests.test_err.SupportTests) ... ok test_seterr (tests.test_err.SupportTests) ... ok test_seterrcall (tests.test_err.SupportTests) ... ok get a generatedby string ... ok MetadataMap functions as expected ... ok MetadataMap functions as expected w user-provided header ... ok MetadataMap functions as expected w process_fns ... ok test the biom otu table parser ... ok tests for parse_biom_table when we do not have h5py ... ok Make sure we can parse a HDF5 table through the same loader ... ok test the biom table parser subsetting ... ok tests for parse_biom_table when we have h5py ... ok empty uc file returns empty Table ... ok invalid query sequence identifier detected ... ok single library seed observed ... ok single new seed observed ... ok new and library seeds observed ... ok multiple new seeds observed ... ok Yield tables binned by observation metadata ... ok Yield tables binned by sample metadata ... ok test_collapse_median (tests.test_table.SparseTableTests) ... ok Collapse observations by arbitrary metadata ... ok Collapse observations by arbitary metadata ... ok Collapse observations by 1-M metadata using divide mode ... ok Collapse observations by arbitary metadata ... ok Collapse samples by arbitrary metadata ... ok Collapse samples by arbitary metadata ... ok Collapse samples by 1-M metadata using divide mode ... ok Collapse samples by arbitary metadata ... ok Should convert other to sparse type ... ok test_copy_data (tests.test_table.SparseTableTests) ... ok test_copy_ids (tests.test_table.SparseTableTests) ... ok test_copy_metadata (tests.test_table.SparseTableTests) ... ok test_data (tests.test_table.SparseTableTests) ... ok check equality between tables ... ok test_data_sparse (tests.test_table.SparseTableTests) ... ok Print out self in a delimited form ... ok sparse equality ... ok Parses a classic table ... ok test_extract_data_from_tsv_badvalue_complaint (tests.test_table.SparseTableTests) ... ok test_filter_general_observation (tests.test_table.SparseTableTests) ... ok test_filter_general_sample (tests.test_table.SparseTableTests) ... ok test_filter_id_state (tests.test_table.SparseTableTests) ... ok test_filter_observations_id (tests.test_table.SparseTableTests) ... ok test_filter_observations_invert (tests.test_table.SparseTableTests) ... ok test_filter_observations_metadata (tests.test_table.SparseTableTests) ... ok test_filter_observations_remove_everything (tests.test_table.SparseTableTests) ... ok test_filter_out_full_table (tests.test_table.SparseTableTests) ... ok test_filter_return_type (tests.test_table.SparseTableTests) ... ok test_filter_sample_id (tests.test_table.SparseTableTests) ... ok test_filter_sample_invert (tests.test_table.SparseTableTests) ... ok test_filter_sample_metadata (tests.test_table.SparseTableTests) ... ok test_filter_sample_remove_everything (tests.test_table.SparseTableTests) ... ok test_filter_table_with_zeros (tests.test_table.SparseTableTests) ... ok test_filter_using_list_of_ids (tests.test_table.SparseTableTests) ... ok test_from_json_issue_697 (tests.test_table.SparseTableTests) ... ok Test correctly computes density of table. ... ok test_identify_bad_value (tests.test_table.SparseTableTests) ... ok Should iterate over samples ... ok test_iter_data_dense (tests.test_table.SparseTableTests) ... ok test_iter_data_sparse (tests.test_table.SparseTableTests) ... ok Iterate over observations of sparse matrix ... ok Iterates data by observations ... ok Iterates data by observations from a single sample. ... ok Iterates observations ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Iterate over samples of sparse matrix ... ok Iterates data by samples ... ok Iterates data by samples with a single observation. ... ok Iterates samples ... ok Merge two tables ... ok Return a list of nonzero positions ... ok Returns nonzero counts over an axis ... ok Returns nonzero counts over an axis ... ok test_nonzero_csc_bug (tests.test_table.SparseTableTests) ... ok normalize observations by sample ... ok normalize sample by observation ... ok test_other_spmatrix_type (tests.test_table.SparseTableTests) ... ok test_pa (tests.test_table.SparseTableTests) ... ok test_pa_with_neg (tests.test_table.SparseTableTests) ... ok test_pa_works_if_something_has_been_zeroed (tests.test_table.SparseTableTests) ... ok rank observations by sample ... ok rank observations by sample with alt method ... ok rank samples by observation ... ok Reduce method ... ok table sorted by a function and provided axis ... ok sorts tables by arbitrary order ... ok test_subsample (tests.test_table.SparseTableTests) ... ok test_subsample_by_id (tests.test_table.SparseTableTests) ... ok subsample would except when if metadata were present ... ok Test of sum! ... ok Should convert a self styled vector to numpy type ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of integers ... ok Get a BIOM format string for a dense table of integers ... ok test_to_json_empty (tests.test_table.SparseTableTests) ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of integers ... ok Get a BIOM format string for a sparse table of integers ... ok Transform axis by arbitrary function ... ok test_transform_return_type (tests.test_table.SparseTableTests) ... ok test_transform_sample (tests.test_table.SparseTableTests) ... ok Should transpose a sparse table ... ok ids are updated as expected ... ok test_update_ids_cache_bug (tests.test_table.SparseTableTests) ... ok ids are updated as expected ... ok test_concat_different_order (tests.test_table.SupportTests) ... ok test_concat_empty (tests.test_table.SupportTests) ... ok test_concat_multiple (tests.test_table.SupportTests) ... ok test_concat_no_metadata_bug (tests.test_table.SupportTests) ... ok test_concat_observations (tests.test_table.SupportTests) ... ok test_concat_pad_on_subset (tests.test_table.SupportTests) ... ok test_concat_raise_overlap (tests.test_table.SupportTests) ... ok test_concat_samples (tests.test_table.SupportTests) ... ok test_concat_table_type (tests.test_table.SupportTests) ... ok test_head (tests.test_table.SupportTests) ... ok test_head_bounded (tests.test_table.SupportTests) ... ok test_head_overstep (tests.test_table.SupportTests) ... ok test_head_zero_or_neg (tests.test_table.SupportTests) ... ok returns a dict for list lookups ... ok prefer x ... ok test_remove_empty_both (tests.test_table.SupportTests) ... ok test_remove_empty_obs (tests.test_table.SupportTests) ... /usr/lib/python2.7/dist-packages/scipy/sparse/compressed.py:746: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient. SparseEfficiencyWarning) ok test_remove_empty_sample (tests.test_table.SupportTests) ... ok Make sure a TableException can be raised ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok convert (values, (row, col)) to scipy ... ok Take a dict and convert to sparse ... ok Take a list of dicts and condense down to a single dict ... ok convert [[row,col,value], ...] to scipy ... ok lists of nparrays to sparse ... ok list of lil_matrix to sparse ... ok Convert nparray to sparse ... ok Convert to expected sparse types ... ok add group metadata works correctly ... ok add group metadata works with existing metadata ... ok add_sample_metadata functions with single md entry ... ok add_sample_metadata functions with existing metadata ... ok add_metadata functions with more than one md entry ... ok add_sample_metadata functions with more than one md entry ... ok test_all_keys_dropped (tests.test_table.TableTests) ... ok Cast metadata objects to defaultdict to support default values ... ok Properly converts ScipySparseMat vectors to dense numpy repr. ... ok test_data_property (tests.test_table.TableTests) ... ok test_del_metadata_badaxis (tests.test_table.TableTests) ... ok test_del_metadata_defaults (tests.test_table.TableTests) ... ok test_del_metadata_empty_list (tests.test_table.TableTests) ... ok test_del_metadata_full (tests.test_table.TableTests) ... ok test_del_metadata_idempotent (tests.test_table.TableTests) ... ok test_del_metadata_jagged (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_observation (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_sample (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_whole (tests.test_table.TableTests) ... ok test_del_metadata_multiple_keys (tests.test_table.TableTests) ... ok test_del_metadata_nomd (tests.test_table.TableTests) ... ok test_del_metadata_partial (tests.test_table.TableTests) ... ok What's your type? ... ok Test whether two matrices are equal. ... ok Verify ValueError raised! ... ok Parse a hdf5 formatted BIOM table ... ok test_from_hdf5_custom_parsers (tests.test_table.TableTests) ... ok Parse a hdf5 formatted BIOM table w/o metadata ... ok HDF5 biom parse successfully loads an empty table ... ok test_from_hdf5_issue_731 (tests.test_table.TableTests) ... ok Parse a observation subset of a hdf5 formatted BIOM table ... ok Parse a observation subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok hdf5 biom table parse throws error with invalid parameters ... ok test_from_tsv (tests.test_table.TableTests) ... ok test_from_tsv_dense (tests.test_table.TableTests) ... ok Test grabbing a column from the matrix. ... ok Test grabbing a row from the matrix. ... ok Return the value located in the matrix by the ids ... ok getitem should work as expeceted ... ok Test getting an element from the matrix. ... ok Handles invalid input ... ok Returns the observation group metadata ... ok Returns the sample group metadata ... ok Index all the ids!!! ... ok Correctly handles invalid input. ... ok returns the observation index ... ok returns the sample index ... ok to_sparse in constructor should be triggered ... ok Combine ids, intersection ... ok returns true if empty ... ok test_length (tests.test_table.TableTests) ... ok test_max_observation (tests.test_table.TableTests) ... ok test_max_sample (tests.test_table.TableTests) ... ok test_max_whole (tests.test_table.TableTests) ... ok Correctly handles invalid input. ... ok returns the observation metadata ... ok returns the observation metadata for a given id ... ok Return the sample metadata ... ok returns the sample metadata for a given id ... ok test_metadata_to_dataframe (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_badaxis (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_nomd (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_uneven_list_metadata (tests.test_table.TableTests) ... ok test_min_observation (tests.test_table.TableTests) ... ok test_min_sample (tests.test_table.TableTests) ... ok test_min_whole (tests.test_table.TableTests) ... ok Test whether two matrices are not equal. ... ok What is your NNZ? ... ok test_nnz_issue_727 (tests.test_table.TableTests) ... ok Verify observation exist! ... ok __repr__ method of biom.table.Table ... ok Verify samples exist! ... ok What kind of shape are you in? ... ok test_to_dataframe (tests.test_table.TableTests) ... ok Write a file ... ok test_to_hdf5_custom_formatters (tests.test_table.TableTests) ... ok Successfully writes an empty OTU table in HDF5 format ... ok test_to_hdf5_general_fallback_to_list (tests.test_table.TableTests) ... ok test_to_hdf5_malformed_taxonomy (tests.test_table.TableTests) ... ok Print out self in a delimited form ... ok Combine unique ids, union ... ok Make sure the metadata is sane (including obs/sample ids) ... ok test_biom_open_empty (tests.test_util.UtilTests) ... ok test_biom_open_hdf5 (tests.test_util.UtilTests) ... ok test_biom_open_hdf5_no_h5py (tests.test_util.UtilTests) ... SKIP: Skipping test: test_biom_open_hdf5_no_h5py: Can only be tested without H5PY test_biom_open_json (tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok test_compute_counts_per_sample_stats_empty (tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok flatten should remove one level of nesting from nested sequences ... ok flatten should not change non-nested sequences (except to list) ... ok test_generate_subsamples (tests.test_util.UtilTests) ... ok Getting the biom project directory functions as expected. ... ok test_is_hdf5_file (tests.test_util.UtilTests) ... ok test_load_classic (tests.test_util.UtilTests) ... ok test_load_table_gzip_unicode (tests.test_util.UtilTests) ... ok test_load_table_unicode (tests.test_util.UtilTests) ... ok natsort should perform numeric comparisons on strings ... ok parse_biom_config_files functions as expected. ... ok Make sure we have the expected md5 with varied input types ... ok unzip(items) should be the inverse of zip(*items) ... ok ---------------------------------------------------------------------- Ran 309 tests in 3.473s OK (SKIP=1) pybuild --test --test-nose -i python{version} -p 3.7 I: pybuild pybuild:269: cp -r /<>/python-biom-format-2.1.6+dfsg/examples /<>/python-biom-format-2.1.6+dfsg/tests /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build I: pybuild base:217: cd /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build; python3.7 -m nose -v tests Correctly adds observation metadata without casting it. ... ok Correctly adds observation metadata with casting. ... ok Correctly adds sample metadata without casting it. ... ok Correctly adds sample metadata with casting. ... ok test_default (tests.test_cli.test_show_install_info.TestShowInstallInfo) ... ok Correctly raises politically correct error upon invalid input. ... ok Correctly subsets observations in a table. ... ok Correctly subsets samples in a hdf5 table ... ok Correctly subsets samples in a table. ... ok Correctly subsets samples in a hdf5 table ... ok TableSummarizer functions as expected ... ok TableSummarizer functions as expected with qualitative=True ... ok Correctly converts biom to classic. ... ok Correctly converts biom to classic with metadata renaming. ... ok Correctly converts classic to biom. ... ok Correctly converts classic to biom with metadata. ... ok Correctly converts json to HDF5 changing the observation metadata ... ok Correctly converts json to HDF5 changing the sample metadata ... ok test_bad_inputs (tests.test_cli.test_table_normalizer.TableNormalizerTests) ... ok test_basic (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_basic_w_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_missing_id (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_no_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc_w_mapping (tests.test_cli.test_uc_processor.TestUcProcessor) ... ok Correctly invalidates a table that is... invalid. ... ok Test an invalid HDF5 table ... ok Correctly validates a table that is indeed... valid. ... ok validates table:columns: fields ... ok validates data: fields ... ok Make sure we have a datetime stamp ... ok Takes a dense matrix field and validates ... ok Should match format string ... ok validates format url ... ok Should have some string for generated by ... ok Test a valid HDF5 table ... ok test_valid_hdf5_metadata_v200 (tests.test_cli.test_validate_table.TableValidatorTests) ... ok test_valid_hdf5_metadata_v210 (tests.test_cli.test_validate_table.TableValidatorTests) ... ok Make sure we have a valid matrix type ... ok Make sure we have a valid matrix type ... ok Can be nullable or an object ... ok Should just work. ... ok validates rows: field ... ok validates shape information ... ok Takes a sparse matrix field and validates ... ok Should be valid table type ... ok test_test_empty (tests.test_err.ErrModeTests) ... ok test_test_obsdup (tests.test_err.ErrModeTests) ... ok test_test_obsmdsize (tests.test_err.ErrModeTests) ... ok test_test_obssize (tests.test_err.ErrModeTests) ... ok test_test_sampdup (tests.test_err.ErrModeTests) ... ok test_test_sampmdsize (tests.test_err.ErrModeTests) ... ok test_test_sampsize (tests.test_err.ErrModeTests) ... ok test_contains (tests.test_err.ErrorProfileTests) ... ok test_getcall (tests.test_err.ErrorProfileTests) ... ok test_handle_error (tests.test_err.ErrorProfileTests) ... ok test_register_unregister (tests.test_err.ErrorProfileTests) ... ok test_setcall (tests.test_err.ErrorProfileTests) ... ok test_state (tests.test_err.ErrorProfileTests) ... ok test_test (tests.test_err.ErrorProfileTests) ... ok test_errcheck (tests.test_err.SupportTests) ... ok test_errstate (tests.test_err.SupportTests) ... ok test_geterr (tests.test_err.SupportTests) ... ok test_geterrcall (tests.test_err.SupportTests) ... ok test_seterr (tests.test_err.SupportTests) ... ok test_seterrcall (tests.test_err.SupportTests) ... ok get a generatedby string ... ok MetadataMap functions as expected ... ok MetadataMap functions as expected w user-provided header ... ok MetadataMap functions as expected w process_fns ... ok test the biom otu table parser ... ok tests for parse_biom_table when we do not have h5py ... ok Make sure we can parse a HDF5 table through the same loader ... ok test the biom table parser subsetting ... ok tests for parse_biom_table when we have h5py ... ok empty uc file returns empty Table ... ok invalid query sequence identifier detected ... ok single library seed observed ... ok single new seed observed ... ok new and library seeds observed ... ok multiple new seeds observed ... ok Yield tables binned by observation metadata ... ok Yield tables binned by sample metadata ... ok test_collapse_median (tests.test_table.SparseTableTests) ... ok Collapse observations by arbitrary metadata ... ok Collapse observations by arbitary metadata ... ok Collapse observations by 1-M metadata using divide mode ... ok Collapse observations by arbitary metadata ... ok Collapse samples by arbitrary metadata ... ok Collapse samples by arbitary metadata ... ok Collapse samples by 1-M metadata using divide mode ... ok Collapse samples by arbitary metadata ... ok Should convert other to sparse type ... ok test_copy_data (tests.test_table.SparseTableTests) ... ok test_copy_ids (tests.test_table.SparseTableTests) ... ok test_copy_metadata (tests.test_table.SparseTableTests) ... ok test_data (tests.test_table.SparseTableTests) ... ok check equality between tables ... ok test_data_sparse (tests.test_table.SparseTableTests) ... ok Print out self in a delimited form ... ok sparse equality ... ok Parses a classic table ... ok test_extract_data_from_tsv_badvalue_complaint (tests.test_table.SparseTableTests) ... ok test_filter_general_observation (tests.test_table.SparseTableTests) ... ok test_filter_general_sample (tests.test_table.SparseTableTests) ... ok test_filter_id_state (tests.test_table.SparseTableTests) ... ok test_filter_observations_id (tests.test_table.SparseTableTests) ... ok test_filter_observations_invert (tests.test_table.SparseTableTests) ... ok test_filter_observations_metadata (tests.test_table.SparseTableTests) ... ok test_filter_observations_remove_everything (tests.test_table.SparseTableTests) ... ok test_filter_out_full_table (tests.test_table.SparseTableTests) ... ok test_filter_return_type (tests.test_table.SparseTableTests) ... ok test_filter_sample_id (tests.test_table.SparseTableTests) ... ok test_filter_sample_invert (tests.test_table.SparseTableTests) ... ok test_filter_sample_metadata (tests.test_table.SparseTableTests) ... ok test_filter_sample_remove_everything (tests.test_table.SparseTableTests) ... ok test_filter_table_with_zeros (tests.test_table.SparseTableTests) ... ok test_filter_using_list_of_ids (tests.test_table.SparseTableTests) ... ok test_from_json_issue_697 (tests.test_table.SparseTableTests) ... ok Test correctly computes density of table. ... ok test_identify_bad_value (tests.test_table.SparseTableTests) ... ok Should iterate over samples ... ok test_iter_data_dense (tests.test_table.SparseTableTests) ... ok test_iter_data_sparse (tests.test_table.SparseTableTests) ... ok Iterate over observations of sparse matrix ... ok Iterates data by observations ... ok Iterates data by observations from a single sample. ... ok Iterates observations ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Iterate over samples of sparse matrix ... ok Iterates data by samples ... ok Iterates data by samples with a single observation. ... ok Iterates samples ... ok Merge two tables ... ok Return a list of nonzero positions ... ok Returns nonzero counts over an axis ... ok Returns nonzero counts over an axis ... ok test_nonzero_csc_bug (tests.test_table.SparseTableTests) ... ok normalize observations by sample ... ok normalize sample by observation ... ok test_other_spmatrix_type (tests.test_table.SparseTableTests) ... ok test_pa (tests.test_table.SparseTableTests) ... ok test_pa_with_neg (tests.test_table.SparseTableTests) ... ok test_pa_works_if_something_has_been_zeroed (tests.test_table.SparseTableTests) ... ok rank observations by sample ... ok rank observations by sample with alt method ... ok rank samples by observation ... ok Reduce method ... ok table sorted by a function and provided axis ... ok sorts tables by arbitrary order ... ok test_subsample (tests.test_table.SparseTableTests) ... ok test_subsample_by_id (tests.test_table.SparseTableTests) ... ok subsample would except when if metadata were present ... ok Test of sum! ... ok Should convert a self styled vector to numpy type ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of integers ... ok Get a BIOM format string for a dense table of integers ... ok test_to_json_empty (tests.test_table.SparseTableTests) ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of integers ... ok Get a BIOM format string for a sparse table of integers ... ok Transform axis by arbitrary function ... ok test_transform_return_type (tests.test_table.SparseTableTests) ... ok test_transform_sample (tests.test_table.SparseTableTests) ... ok Should transpose a sparse table ... ok ids are updated as expected ... ok test_update_ids_cache_bug (tests.test_table.SparseTableTests) ... ok ids are updated as expected ... ok test_concat_different_order (tests.test_table.SupportTests) ... ok test_concat_empty (tests.test_table.SupportTests) ... ok test_concat_multiple (tests.test_table.SupportTests) ... ok test_concat_no_metadata_bug (tests.test_table.SupportTests) ... ok test_concat_observations (tests.test_table.SupportTests) ... ok test_concat_pad_on_subset (tests.test_table.SupportTests) ... ok test_concat_raise_overlap (tests.test_table.SupportTests) ... ok test_concat_samples (tests.test_table.SupportTests) ... ok test_concat_table_type (tests.test_table.SupportTests) ... ok test_head (tests.test_table.SupportTests) ... ok test_head_bounded (tests.test_table.SupportTests) ... ok test_head_overstep (tests.test_table.SupportTests) ... ok test_head_zero_or_neg (tests.test_table.SupportTests) ... ok returns a dict for list lookups ... ok prefer x ... ok test_remove_empty_both (tests.test_table.SupportTests) ... ok test_remove_empty_obs (tests.test_table.SupportTests) ... /usr/lib/python3/dist-packages/scipy/sparse/compressed.py:746: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient. SparseEfficiencyWarning) ok test_remove_empty_sample (tests.test_table.SupportTests) ... ok Make sure a TableException can be raised ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok convert (values, (row, col)) to scipy ... ok Take a dict and convert to sparse ... ok Take a list of dicts and condense down to a single dict ... ok convert [[row,col,value], ...] to scipy ... ok lists of nparrays to sparse ... ok list of lil_matrix to sparse ... ok Convert nparray to sparse ... ok Convert to expected sparse types ... ok add group metadata works correctly ... ok add group metadata works with existing metadata ... ok add_sample_metadata functions with single md entry ... ok add_sample_metadata functions with existing metadata ... ok add_metadata functions with more than one md entry ... ok add_sample_metadata functions with more than one md entry ... ok test_all_keys_dropped (tests.test_table.TableTests) ... ok Cast metadata objects to defaultdict to support default values ... ok Properly converts ScipySparseMat vectors to dense numpy repr. ... ok test_data_property (tests.test_table.TableTests) ... ok test_del_metadata_badaxis (tests.test_table.TableTests) ... ok test_del_metadata_defaults (tests.test_table.TableTests) ... ok test_del_metadata_empty_list (tests.test_table.TableTests) ... ok test_del_metadata_full (tests.test_table.TableTests) ... ok test_del_metadata_idempotent (tests.test_table.TableTests) ... ok test_del_metadata_jagged (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_observation (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_sample (tests.test_table.TableTests) ... ok test_del_metadata_keys_none_whole (tests.test_table.TableTests) ... ok test_del_metadata_multiple_keys (tests.test_table.TableTests) ... ok test_del_metadata_nomd (tests.test_table.TableTests) ... ok test_del_metadata_partial (tests.test_table.TableTests) ... ok What's your type? ... ok Test whether two matrices are equal. ... ok Verify ValueError raised! ... ok Parse a hdf5 formatted BIOM table ... ok test_from_hdf5_custom_parsers (tests.test_table.TableTests) ... ok Parse a hdf5 formatted BIOM table w/o metadata ... ok HDF5 biom parse successfully loads an empty table ... ok test_from_hdf5_issue_731 (tests.test_table.TableTests) ... ok Parse a observation subset of a hdf5 formatted BIOM table ... ok Parse a observation subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok hdf5 biom table parse throws error with invalid parameters ... ok test_from_tsv (tests.test_table.TableTests) ... ok test_from_tsv_dense (tests.test_table.TableTests) ... ok Test grabbing a column from the matrix. ... ok Test grabbing a row from the matrix. ... ok Return the value located in the matrix by the ids ... ok getitem should work as expeceted ... ok Test getting an element from the matrix. ... ok Handles invalid input ... ok Returns the observation group metadata ... ok Returns the sample group metadata ... ok Index all the ids!!! ... ok Correctly handles invalid input. ... ok returns the observation index ... ok returns the sample index ... ok to_sparse in constructor should be triggered ... ok Combine ids, intersection ... ok returns true if empty ... ok test_length (tests.test_table.TableTests) ... ok test_max_observation (tests.test_table.TableTests) ... ok test_max_sample (tests.test_table.TableTests) ... ok test_max_whole (tests.test_table.TableTests) ... ok Correctly handles invalid input. ... ok returns the observation metadata ... ok returns the observation metadata for a given id ... ok Return the sample metadata ... ok returns the sample metadata for a given id ... ok test_metadata_to_dataframe (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_badaxis (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_nomd (tests.test_table.TableTests) ... ok test_metadata_to_dataframe_uneven_list_metadata (tests.test_table.TableTests) ... ok test_min_observation (tests.test_table.TableTests) ... ok test_min_sample (tests.test_table.TableTests) ... ok test_min_whole (tests.test_table.TableTests) ... ok Test whether two matrices are not equal. ... ok What is your NNZ? ... ok test_nnz_issue_727 (tests.test_table.TableTests) ... ok Verify observation exist! ... ok __repr__ method of biom.table.Table ... ok Verify samples exist! ... ok What kind of shape are you in? ... ok test_to_dataframe (tests.test_table.TableTests) ... ok Write a file ... ok test_to_hdf5_custom_formatters (tests.test_table.TableTests) ... ok Successfully writes an empty OTU table in HDF5 format ... ok test_to_hdf5_general_fallback_to_list (tests.test_table.TableTests) ... ok test_to_hdf5_malformed_taxonomy (tests.test_table.TableTests) ... ok Print out self in a delimited form ... ok Combine unique ids, union ... ok Make sure the metadata is sane (including obs/sample ids) ... ok test_biom_open_empty (tests.test_util.UtilTests) ... ok test_biom_open_hdf5 (tests.test_util.UtilTests) ... ok test_biom_open_hdf5_no_h5py (tests.test_util.UtilTests) ... SKIP: Skipping test: test_biom_open_hdf5_no_h5py: Can only be tested without H5PY test_biom_open_json (tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok test_compute_counts_per_sample_stats_empty (tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok flatten should remove one level of nesting from nested sequences ... ok flatten should not change non-nested sequences (except to list) ... ok test_generate_subsamples (tests.test_util.UtilTests) ... ok Getting the biom project directory functions as expected. ... ok test_is_hdf5_file (tests.test_util.UtilTests) ... ok test_load_classic (tests.test_util.UtilTests) ... ok test_load_table_gzip_unicode (tests.test_util.UtilTests) ... ok test_load_table_unicode (tests.test_util.UtilTests) ... ok natsort should perform numeric comparisons on strings ... ok parse_biom_config_files functions as expected. ... ok Make sure we have the expected md5 with varied input types ... ok unzip(items) should be the inverse of zip(*items) ... ok ---------------------------------------------------------------------- Ran 309 tests in 2.912s OK (SKIP=1) create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with python2,python3,bash-completion,sphinxdoc --buildsystem=pybuild dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild rm -f -- debian/python-biom-format.substvars debian/python3-biom-format.substvars debian/biom-format-tools.substvars rm -fr -- debian/.debhelper/generated/python-biom-format/ debian/python-biom-format/ debian/tmp/ debian/.debhelper/generated/python3-biom-format/ debian/python3-biom-format/ debian/.debhelper/generated/biom-format-tools/ debian/biom-format-tools/ rm -f debian/biom-format-tools.debhelper.log debian/python-biom-format.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/<>/python-biom-format-2.1.6+dfsg' dh_auto_install install -d /<>/python-biom-format-2.1.6\+dfsg/debian/tmp pybuild --install --test-nose -i python{version} -p 2.7 --dest-dir /<>/python-biom-format-2.1.6\+dfsg/debian/tmp I: pybuild base:217: /usr/bin/python setup.py install --root /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format running install running build running build_py running egg_info writing requirements to biom_format.egg-info/requires.txt writing biom_format.egg-info/PKG-INFO writing top-level names to biom_format.egg-info/top_level.txt writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' running build_ext running install_lib creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7 creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/parse.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/err.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/exception.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/table.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/parse.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets/exercise_cli.sh -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets/exercise_api.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/exception.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/util.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/__init__.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/err.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_subsetter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_validator.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_validator.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_subsetter.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/uc_processor.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/metadata_adder.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_ids.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_converter.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_head.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/util.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_normalizer.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/__init__.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/metadata_adder.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_ids.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_summarizer.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/installation_informer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/installation_informer.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_head.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_summarizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/sam_md.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/obs_md.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/min_sparse_otu_table.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/rich_sparse_otu_table.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_err.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/bench_tables creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_table_converter.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_subset_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_uc_processor.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_validate_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_validate_table.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_add_metadata.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_show_install_info.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_data/json_obs_collapsed.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_data/test.json -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_data/test.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_data/json_sample_collapsed.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_summarize_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_show_install_info.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/__init__.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_table_normalizer.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_add_metadata.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_summarize_table.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_cli/test_subset_table.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_parse.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_parse.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests creating /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/test.json.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/no-contents.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/bad_table.txt.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/test.json -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/test.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/bad_table.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/__init__.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_data/empty.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_util.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/__init__.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_err.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython2_2.7_biom-format/build/tests/test_table.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/parse.py to parse.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/__init__.py to __init__.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/util.py to util.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets/exercise_api.py to exercise_api.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/exception.py to exception.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/table.py to table.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/err.py to err.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/__init__.py to __init__.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/util.py to util.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_subsetter.py to table_subsetter.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_validator.py to table_validator.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/uc_processor.py to uc_processor.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_head.py to table_head.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_converter.py to table_converter.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/metadata_adder.py to metadata_adder.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_ids.py to table_ids.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_normalizer.py to table_normalizer.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/installation_informer.py to installation_informer.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_summarizer.py to table_summarizer.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/__init__.py to __init__.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_subset_table.py to test_subset_table.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_validate_table.py to test_validate_table.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/__init__.py to __init__.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_table_normalizer.py to test_table_normalizer.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_summarize_table.py to test_summarize_table.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_uc_processor.py to test_uc_processor.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_show_install_info.py to test_show_install_info.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_table_converter.py to test_table_converter.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_cli/test_add_metadata.py to test_add_metadata.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_parse.py to test_parse.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_data/__init__.py to __init__.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_table.py to test_table.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_err.py to test_err.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/tests/test_util.py to test_util.pyc running install_egg_info Copying biom_format.egg-info to /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom_format-2.1.6.egg-info Skipping SOURCES.txt running install_scripts Installing biom script to /<>/python-biom-format-2.1.6+dfsg/debian/python-biom-format/usr/bin I: pybuild pybuild:295: dh_numpy (grep -a -s -v python:Depends debian/python-biom-format.substvars; echo "python:Depends=python-numpy (>= 1:1.14.3), python-numpy-abi9") > debian/python-biom-format.substvars.new mv debian/python-biom-format.substvars.new debian/python-biom-format.substvars (grep -a -s -v python:Depends debian/python3-biom-format.substvars; echo "python:Depends=python-numpy (>= 1:1.14.3), python-numpy-abi9") > debian/python3-biom-format.substvars.new mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars (grep -a -s -v python:Depends debian/biom-format-tools.substvars; echo "python:Depends=python-numpy (>= 1:1.14.3), python-numpy-abi9") > debian/biom-format-tools.substvars.new mv debian/biom-format-tools.substvars.new debian/biom-format-tools.substvars pybuild --install --test-nose -i python{version} -p 3.7 --dest-dir /<>/python-biom-format-2.1.6\+dfsg/debian/tmp I: pybuild base:217: /usr/bin/python3 setup.py install --root /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format running install running build running build_py running egg_info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' running build_ext running install_lib creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7 creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/parse.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/__init__.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/parse.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/err.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/table.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/util.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/exception.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.cpython-37m-i386-linux-gnu.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.pyx -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets/exercise_cli.sh -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets/exercise_api.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/exception.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.cpython-37m-i386-linux-gnu.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.c -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/err.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.cpython-37m-i386-linux-gnu.so -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_subsetter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_validator.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_subsetter.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/installation_informer.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/__init__.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_summarizer.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/metadata_adder.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_ids.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_validator.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/util.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_converter.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/uc_processor.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_normalizer.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_head.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_head.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/metadata_adder.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_ids.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/installation_informer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_summarizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/sam_md.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/obs_md.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/min_sparse_otu_table.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/rich_sparse_otu_table.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/bench_tables creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__pycache__/__init__.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__pycache__/test_util.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__pycache__/test_parse.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__pycache__/test_err.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/__pycache__/test_table.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__pycache__ creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_subset_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_validate_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_uc_processor.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_table_converter.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/__init__.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_add_metadata.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_show_install_info.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_validate_table.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_summarize_table.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_table_normalizer.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/__pycache__/test_subset_table.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__pycache__ creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_data/json_obs_collapsed.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_data/test.json -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_data/test.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_data/json_sample_collapsed.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_table_normalizer.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_summarize_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_uc_processor.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_show_install_info.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_table_converter.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_cli/test_add_metadata.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_parse.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/test.json.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/__init__.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/no-contents.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data creating /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/__pycache__/__init__.cpython-37.pyc -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data/__pycache__ copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/bad_table.txt.gz -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/test.json -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/test.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/bad_table.txt -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_data/empty.biom -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_table.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_err.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests copying /<>/python-biom-format-2.1.6+dfsg/.pybuild/cpython3_3.7_biom-format/build/tests/test_util.py -> /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/parse.py to parse.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/util.py to util.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets/exercise_api.py to exercise_api.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/exception.py to exception.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/table.py to table.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/err.py to err.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/util.py to util.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_subsetter.py to table_subsetter.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_validator.py to table_validator.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/uc_processor.py to uc_processor.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_head.py to table_head.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_converter.py to table_converter.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/metadata_adder.py to metadata_adder.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_ids.py to table_ids.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_normalizer.py to table_normalizer.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/installation_informer.py to installation_informer.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_summarizer.py to table_summarizer.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_subset_table.py to test_subset_table.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_validate_table.py to test_validate_table.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_table_normalizer.py to test_table_normalizer.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_summarize_table.py to test_summarize_table.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_uc_processor.py to test_uc_processor.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_show_install_info.py to test_show_install_info.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_table_converter.py to test_table_converter.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_cli/test_add_metadata.py to test_add_metadata.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_parse.py to test_parse.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_data/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_table.py to test_table.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_err.py to test_err.cpython-37.pyc byte-compiling /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/tests/test_util.py to test_util.cpython-37.pyc running install_egg_info Copying biom_format.egg-info to /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom_format-2.1.6.egg-info Skipping SOURCES.txt running install_scripts Installing biom script to /<>/python-biom-format-2.1.6+dfsg/debian/python3-biom-format/usr/bin I: pybuild pybuild:295: dh_numpy3 (grep -a -s -v python3:Depends debian/python-biom-format.substvars; echo "python3:Depends=python3-numpy (>= 1:1.14.3), python3-numpy-abi9") > debian/python-biom-format.substvars.new mv debian/python-biom-format.substvars.new debian/python-biom-format.substvars (grep -a -s -v python3:Depends debian/python3-biom-format.substvars; echo "python3:Depends=python3-numpy (>= 1:1.14.3), python3-numpy-abi9") > debian/python3-biom-format.substvars.new mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars (grep -a -s -v python3:Depends debian/biom-format-tools.substvars; echo "python3:Depends=python3-numpy (>= 1:1.14.3), python3-numpy-abi9") > debian/biom-format-tools.substvars.new mv debian/biom-format-tools.substvars.new debian/biom-format-tools.substvars # Install command-line scripts in separate tools package. dh_install --sourcedir=debian/python3-biom-format \ --package=biom-format-tools usr/bin install -d debian/.debhelper/generated/python-biom-format install -d debian/.debhelper/generated/python3-biom-format install -d debian/.debhelper/generated/python-biom-format-doc install -d debian/biom-format-tools//usr cp --reflink=auto -a debian/python3-biom-format/usr/bin debian/biom-format-tools//usr/ install -d debian/.debhelper/generated/biom-format-tools rm -rf debian/python-biom-format/usr/bin rm -rf debian/python3-biom-format/usr/bin make[1]: Leaving directory '/<>/python-biom-format-2.1.6+dfsg' dh_installdocs -a -O--buildsystem=pybuild install -d debian/python-biom-format/usr/share/doc/python-biom-format install -p -m0644 debian/copyright debian/python-biom-format/usr/share/doc/python-biom-format/copyright install -d debian/python3-biom-format/usr/share/doc/python3-biom-format install -p -m0644 debian/copyright debian/python3-biom-format/usr/share/doc/python3-biom-format/copyright install -d debian/biom-format-tools/usr/share/doc/biom-format-tools install -p -m0644 debian/copyright debian/biom-format-tools/usr/share/doc/biom-format-tools/copyright dh_sphinxdoc -a -O--buildsystem=pybuild dh_sphinxdoc: Sphinx documentation not found dh_installchangelogs -a -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/python-biom-format/usr/share/doc/python-biom-format/changelog.Debian install -p -m0644 debian/changelog debian/biom-format-tools/usr/share/doc/biom-format-tools/changelog.Debian install -p -m0644 debian/changelog debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog.Debian dh_installexamples -a -O--buildsystem=pybuild dh_bash-completion -a -O--buildsystem=pybuild dh_python2 -a -O--buildsystem=pybuild D: dh_python2 dh_python2:393: version: 3.20180927ubuntu1 D: dh_python2 dh_python2:394: argv: ['/usr/share/dh-python/dh_python2', '-a', '-O--buildsystem=pybuild'] D: dh_python2 dh_python2:395: options: {'guess_versions': True, 'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': True, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'namespaces': None, 'clean_pycentral': False, 'shebang': None, 'ignore_shebangs': False, 'ignore_namespace': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python2 dh_python2:396: args: [] D: dh_python2 dh_python2:398: supported Python versions: 2.7 (default=2.7) D: dh_python2 debhelper:107: skipping package: python3-biom-format D: dh_python2 debhelper:100: skipping package biom-format-tools (missing ${python:Depends} in Depends) D: dh_python2 debhelper:153: source=python-biom-format, binary packages=['python-biom-format'] D: dh_python2 dh_python2:415: processing package python-biom-format... D: dh_python2 fs:164: removing dist-packages/tests D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/__init__.pyc D: dh_python2 tools:230: invoking: python2.7 -c 'import sysconfig as s;print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' I: dh_python2 fs:329: renaming _filter.so to _filter.i386-linux-gnu.so I: dh_python2 fs:329: renaming _subsample.so to _subsample.i386-linux-gnu.so I: dh_python2 fs:329: renaming _transform.so to _transform.i386-linux-gnu.so D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/err.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/exception.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/parse.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/table.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/util.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets/exercise_api.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/__init__.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/installation_informer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/metadata_adder.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_converter.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_head.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_ids.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_normalizer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_subsetter.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_summarizer.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_validator.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/uc_processor.pyc D: dh_python2 fs:195: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/util.pyc D: dh_python2 fs:246: package python-biom-format details = {'requires.txt': {'debian/python-biom-format/usr/lib/python2.7/dist-packages/biom_format-2.1.6.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('2.7')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('2.7')}, 'ext_no_version': set()} D: dh_python2 depends:114: generating dependencies for package python-biom-format D: dh_python2 pydist:137: trying to find dependency for click (python=2.7) D: dh_python2 pydist:137: trying to find dependency for future>=0.16.0 (python=2.7) D: dh_python2 pydist:137: trying to find dependency for numpy>=1.3.0 (python=2.7) D: dh_python2 pydist:137: trying to find dependency for pandas>=0.19.2 (python=2.7) D: dh_python2 pydist:137: trying to find dependency for pyqi (python=2.7) D: dh_python2 pydist:137: trying to find dependency for scipy>=0.13.0 (python=2.7) D: dh_python2 pydist:137: trying to find dependency for six>=1.10.0 (python=2.7) D: dh_python2 depends:272: D={'python:any (<< 2.8)', 'python-six (>= 1.10.0)', 'python-click', 'python-pandas', 'python-numpy', 'python (>= 2.7~)', 'pyqi', 'python (<< 2.8)', 'python:any', 'python:any (>= 2.7~)', 'python-scipy', 'python-future'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_python3 -a -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 3.20180927ubuntu1 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': True, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:166: supported Python versions: 3.7 (default=3.7) D: dh_python3 debhelper:107: skipping package: python-biom-format D: dh_python3 debhelper:107: skipping package: python-biom-format-doc D: dh_python3 debhelper:153: source=python-biom-format, binary packages=['python3-biom-format', 'biom-format-tools'] D: dh_python3 dh_python3:183: processing package python3-biom-format... D: dh_python3 fs:49: moving files from debian/python3-biom-format/usr/lib/python3.7/dist-packages to debian/python3-biom-format/usr/lib/python3/dist-packages/ D: dh_python3 fs:164: removing dist-packages/tests D: dh_python3 fs:246: package python3-biom-format details = {'requires.txt': {'debian/python3-biom-format/usr/lib/python3/dist-packages/biom_format-2.1.6.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.7')}, 'ext_no_version': set()} D: dh_python3 depends:114: generating dependencies for package python3-biom-format D: dh_python3 pydist:137: trying to find dependency for click (python=None) D: dh_python3 pydist:137: trying to find dependency for future>=0.16.0 (python=None) D: dh_python3 pydist:137: trying to find dependency for numpy>=1.3.0 (python=None) D: dh_python3 pydist:137: trying to find dependency for pandas>=0.19.2 (python=None) D: dh_python3 pydist:137: trying to find dependency for scipy>=0.13.0 (python=None) D: dh_python3 pydist:137: trying to find dependency for six>=1.10.0 (python=None) D: dh_python3 depends:272: D={'python3-future', 'python3-click', 'python3:any', 'python3 (<< 3.8)', 'python3-pandas', 'python3-scipy', 'python3 (>= 3.7~)', 'python3-six (>= 1.10.0)', 'python3-numpy'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python3 dh_python3:183: processing package biom-format-tools... D: dh_python3 fs:246: package biom-format-tools details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': set(), 'private_dirs': {}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:114: generating dependencies for package biom-format-tools D: dh_python3 depends:272: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild cd debian/python-biom-format cd debian/python3-biom-format cd debian/biom-format-tools chmod a-x usr/share/doc/biom-format-tools/changelog.Debian chmod a-x usr/share/doc/python-biom-format/changelog.Debian gzip -9nf usr/share/doc/biom-format-tools/changelog.Debian chmod a-x usr/share/doc/python3-biom-format/changelog.Debian gzip -9nf usr/share/doc/python-biom-format/changelog.Debian cd '/<>/python-biom-format-2.1.6+dfsg' gzip -9nf usr/share/doc/python3-biom-format/changelog.Debian cd '/<>/python-biom-format-2.1.6+dfsg' cd '/<>/python-biom-format-2.1.6+dfsg' dh_fixperms -a -O--buildsystem=pybuild find debian/python-biom-format -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-biom-format -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/biom-format-tools -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/biom-format-tools ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/biom-format-tools/usr/share/doc -type f -a -true -a ! -regex 'debian/biom-format-tools/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/biom-format-tools/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/biom-format-tools -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/biom-format-tools/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/13 objcopy --only-keep-debug --compress-debug-sections debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.i386-linux-gnu.so debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/13/f141dcab7455ea604d4e1b50e3ab30ae1e733a.debug install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/99 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/99/d753838054a0b912f45c2871113df11fd448a1.debug chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/13/f141dcab7455ea604d4e1b50e3ab30ae1e733a.debug chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/13/f141dcab7455ea604d4e1b50e3ab30ae1e733a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.i386-linux-gnu.so chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/99/d753838054a0b912f45c2871113df11fd448a1.debug chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/99/d753838054a0b912f45c2871113df11fd448a1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/99/d753838054a0b912f45c2871113df11fd448a1.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-i386-linux-gnu.so install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/51 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/51/d13926955f2a1c2825f9a3226c36f39c2e573d.debug objcopy --add-gnu-debuglink debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/13/f141dcab7455ea604d4e1b50e3ab30ae1e733a.debug debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.i386-linux-gnu.so install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/9e objcopy --only-keep-debug --compress-debug-sections debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.i386-linux-gnu.so debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/9e/4788afea0968d1c58b4c7cc2df938e8282ce83.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/51/d13926955f2a1c2825f9a3226c36f39c2e573d.debug chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/51/d13926955f2a1c2825f9a3226c36f39c2e573d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/51/d13926955f2a1c2825f9a3226c36f39c2e573d.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-i386-linux-gnu.so chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/9e/4788afea0968d1c58b4c7cc2df938e8282ce83.debug chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/9e/4788afea0968d1c58b4c7cc2df938e8282ce83.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/9e/4788afea0968d1c58b4c7cc2df938e8282ce83.debug debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.i386-linux-gnu.so install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/66 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-i386-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/66/2c2e4323812b7927fe67c191c807d383e1a29a.debug install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/2d objcopy --only-keep-debug --compress-debug-sections debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.i386-linux-gnu.so debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/2d/8825151a0326023cb54c38dba5f50431bdea69.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/66/2c2e4323812b7927fe67c191c807d383e1a29a.debug chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/66/2c2e4323812b7927fe67c191c807d383e1a29a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/66/2c2e4323812b7927fe67c191c807d383e1a29a.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-i386-linux-gnu.so chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/2d/8825151a0326023cb54c38dba5f50431bdea69.debug chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/2d/8825151a0326023cb54c38dba5f50431bdea69.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.i386-linux-gnu.so install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc ln -s python3-biom-format debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc/python3-biom-format-dbgsym objcopy --add-gnu-debuglink debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/2d/8825151a0326023cb54c38dba5f50431bdea69.debug debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.i386-linux-gnu.so install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/share/doc ln -s python-biom-format debian/.debhelper/python-biom-format/dbgsym-root/usr/share/doc/python-biom-format-dbgsym dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/python-biom-format/DEBIAN/shlibs rm -f debian/python3-biom-format/DEBIAN/shlibs rm -f debian/biom-format-tools/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -d debian/python-biom-format/DEBIAN dpkg-shlibdeps -Tdebian/python-biom-format.substvars debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.i386-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.i386-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.i386-linux-gnu.so install -d debian/python3-biom-format/DEBIAN dpkg-shlibdeps -Tdebian/python3-biom-format.substvars debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-i386-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-i386-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-i386-linux-gnu.so dh_installdeb -a -O--buildsystem=pybuild printf '#!/bin/sh\nset -e\n' > debian/python-biom-format/DEBIAN/postinst cat debian/python-biom-format.postinst.debhelper >> debian/python-biom-format/DEBIAN/postinst chmod 0755 -- debian/python-biom-format/DEBIAN/postinst chown 0:0 -- debian/python-biom-format/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python-biom-format/DEBIAN/prerm cat debian/python-biom-format.prerm.debhelper >> debian/python-biom-format/DEBIAN/prerm chmod 0755 -- debian/python-biom-format/DEBIAN/prerm chown 0:0 -- debian/python-biom-format/DEBIAN/prerm printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/postinst cat debian/python3-biom-format.postinst.debhelper >> debian/python3-biom-format/DEBIAN/postinst chmod 0755 -- debian/python3-biom-format/DEBIAN/postinst chown 0:0 -- debian/python3-biom-format/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/prerm cat debian/python3-biom-format.prerm.debhelper >> debian/python3-biom-format/DEBIAN/prerm chmod 0755 -- debian/python3-biom-format/DEBIAN/prerm chown 0:0 -- debian/python3-biom-format/DEBIAN/prerm install -d debian/biom-format-tools/DEBIAN dh_gencontrol -a -O--buildsystem=pybuild echo misc:Depends= >> debian/biom-format-tools.substvars echo misc:Pre-Depends= >> debian/biom-format-tools.substvars dpkg-gencontrol -pbiom-format-tools -ldebian/changelog -Tdebian/biom-format-tools.substvars -Pdebian/biom-format-tools -UMulti-Arch echo misc:Depends= >> debian/python-biom-format.substvars echo misc:Pre-Depends= >> debian/python-biom-format.substvars install -d debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN dpkg-gencontrol -ppython-biom-format -ldebian/changelog -Tdebian/python-biom-format.substvars -Pdebian/.debhelper/python-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python-biom-format-dbgsym "-DDepends=python-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python-biom-format" "-DBuild-Ids=13f141dcab7455ea604d4e1b50e3ab30ae1e733a 2d8825151a0326023cb54c38dba5f50431bdea69 9e4788afea0968d1c58b4c7cc2df938e8282ce83" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks echo misc:Depends= >> debian/python3-biom-format.substvars echo misc:Pre-Depends= >> debian/python3-biom-format.substvars install -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/.debhelper/python3-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python3-biom-format-dbgsym "-DDepends=python3-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python3-biom-format" "-DBuild-Ids=51d13926955f2a1c2825f9a3226c36f39c2e573d 662c2e4323812b7927fe67c191c807d383e1a29a 99d753838054a0b912f45c2871113df11fd448a1" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python3:Depends} dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Provides} dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Versions} chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython-biom-format -ldebian/changelog -Tdebian/python-biom-format.substvars -Pdebian/python-biom-format -UMulti-Arch dpkg-gencontrol: warning: package biom-format-tools: unused substitution variable ${python:Depends} chmod 0644 -- debian/biom-format-tools/DEBIAN/control chown 0:0 -- debian/biom-format-tools/DEBIAN/control dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python3:Provides} dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python3:Versions} dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python:Depends} chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/python3-biom-format -UMulti-Arch dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python3:Depends} dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Provides} dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Versions} chmod 0644 -- debian/python-biom-format/DEBIAN/control chown 0:0 -- debian/python-biom-format/DEBIAN/control dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python3:Provides} dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python3:Versions} dpkg-gencontrol: warning: package python3-biom-format: unused substitution variable ${python:Depends} chmod 0644 -- debian/python3-biom-format/DEBIAN/control chown 0:0 -- debian/python3-biom-format/DEBIAN/control dh_md5sums -a -O--buildsystem=pybuild (cd debian/python-biom-format >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null (cd debian/python3-biom-format >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null (cd debian/biom-format-tools >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/biom-format-tools/DEBIAN/md5sums chown 0:0 -- debian/biom-format-tools/DEBIAN/md5sums chmod 0644 -- debian/python3-biom-format/DEBIAN/md5sums chown 0:0 -- debian/python3-biom-format/DEBIAN/md5sums (cd debian/.debhelper/python3-biom-format/dbgsym-root >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/python-biom-format/DEBIAN/md5sums chown 0:0 -- debian/python-biom-format/DEBIAN/md5sums (cd debian/.debhelper/python-biom-format/dbgsym-root >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/md5sums dh_builddeb -a -O--buildsystem=pybuild dpkg-deb --build debian/python-biom-format .. dpkg-deb --build debian/biom-format-tools .. dpkg-deb --build debian/python3-biom-format .. INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 pkgstriptranslations: processing biom-format-tools (in debian/biom-format-tools); do_strip: , oemstrip: pkgstriptranslations: processing python-biom-format (in debian/python-biom-format); do_strip: , oemstrip: pkgstriptranslations: processing python3-biom-format (in debian/python3-biom-format); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python-biom-format/DEBIAN/control, package python-biom-format, directory debian/python-biom-format pkgstripfiles: Truncating usr/share/doc/python-biom-format/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package python-biom-format ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python-biom-format' in '../python-biom-format_2.1.6+dfsg-2ubuntu2_i386.deb'. install -d debian/.debhelper/scratch-space/build-python-biom-format dpkg-deb --build debian/.debhelper/python-biom-format/dbgsym-root debian/.debhelper/scratch-space/build-python-biom-format INFO: pkgstriptranslations version 143 pkgstriptranslations: processing python-biom-format-dbgsym (in debian/.debhelper/python-biom-format/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/control, package python-biom-format-dbgsym, directory debian/.debhelper/python-biom-format/dbgsym-root dpkg-deb: building package 'python-biom-format-dbgsym' in 'debian/.debhelper/scratch-space/build-python-biom-format/python-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.deb'. Renaming python-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.deb to python-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.ddeb mv debian/.debhelper/scratch-space/build-python-biom-format/python-biom-format-dbgsym_2.1.6\+dfsg-2ubuntu2_i386.deb ../python-biom-format-dbgsym_2.1.6\+dfsg-2ubuntu2_i386.ddeb pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/biom-format-tools/DEBIAN/control, package biom-format-tools, directory debian/biom-format-tools INFO: pkgstripfiles: waiting for lock (biom-format-tools) ... INFO: pkgstripfiles: waiting for lock (biom-format-tools) ... INFO: pkgstripfiles: waiting for lock (biom-format-tools) ... INFO: pkgstripfiles: waiting for lock (biom-format-tools) ... INFO: pkgstripfiles: waiting for lock (biom-format-tools) ... INFO: pkgstripfiles: waiting for lock (biom-format-tools) ... INFO: pkgstripfiles: waiting for lock (biom-format-tools) ... INFO: pkgstripfiles: waiting for lock (biom-format-tools) ... INFO: pkgstripfiles: waiting for lock (biom-format-tools) ... INFO: pkgstripfiles: waiting for lock (biom-format-tools) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python3-biom-format/DEBIAN/control, package python3-biom-format, directory debian/python3-biom-format pkgstripfiles: Truncating usr/share/doc/python3-biom-format/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-biom-format ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-biom-format' in '../python3-biom-format_2.1.6+dfsg-2ubuntu2_i386.deb'. Searching for duplicated docs in dependency python3-biom-format... symlinking changelog.Debian.gz in biom-format-tools to file in python3-biom-format pkgstripfiles: Running PNG optimization (using 4 cpus) for package biom-format-tools ... pkgstripfiles: No PNG files. dpkg-deb: building package 'biom-format-tools' in '../biom-format-tools_2.1.6+dfsg-2ubuntu2_i386.deb'. install -d debian/.debhelper/scratch-space/build-python3-biom-format dpkg-deb --build debian/.debhelper/python3-biom-format/dbgsym-root debian/.debhelper/scratch-space/build-python3-biom-format INFO: pkgstriptranslations version 143 pkgstriptranslations: processing python3-biom-format-dbgsym (in debian/.debhelper/python3-biom-format/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control, package python3-biom-format-dbgsym, directory debian/.debhelper/python3-biom-format/dbgsym-root dpkg-deb: building package 'python3-biom-format-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-biom-format/python3-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.deb'. Renaming python3-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.deb to python3-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.ddeb mv debian/.debhelper/scratch-space/build-python3-biom-format/python3-biom-format-dbgsym_2.1.6\+dfsg-2ubuntu2_i386.deb ../python3-biom-format-dbgsym_2.1.6\+dfsg-2ubuntu2_i386.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../python-biom-format_2.1.6+dfsg-2ubuntu2_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build python-biom-format-2.1.6+dfsg dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20181103-1644 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ python-biom-format_2.1.6+dfsg-2ubuntu2_i386.changes: ---------------------------------------------------- Format: 1.8 Date: Sat, 03 Nov 2018 16:35:01 +0000 Source: python-biom-format Binary: python-biom-format python3-biom-format python-biom-format-doc biom-format-tools Architecture: i386 Version: 2.1.6+dfsg-2ubuntu2 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: biom-format-tools - command-line tools for BIOM format python-biom-format - Biological Observation Matrix (BIOM) format (Python 2) python-biom-format-doc - documentation for BIOM format python3-biom-format - Biological Observation Matrix (BIOM) format (Python 3) Changes: python-biom-format (2.1.6+dfsg-2ubuntu2) disco; urgency=medium . * No-change rebuild to build without python3.6 support. Checksums-Sha1: 1d751c2bbf89c1524446a0e3f3569fa70719357e 2732 biom-format-tools_2.1.6+dfsg-2ubuntu2_i386.deb ed5f8f2f2c408e5cfcb8e986dbdb4f85b564632e 263952 python-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.ddeb 33dee5d34a324319a167e309b3c47c9a4dd84b04 10064 python-biom-format_2.1.6+dfsg-2ubuntu2_i386.buildinfo 1ebdca024890d3982109c83d1009cccbeadb77c6 178092 python-biom-format_2.1.6+dfsg-2ubuntu2_i386.deb 752882db4e3993aa069854f67a3182136b4db4ae 245768 python3-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.ddeb f0ddfcb488ea3c0723ef4156eabe815fb8b55be6 169908 python3-biom-format_2.1.6+dfsg-2ubuntu2_i386.deb Checksums-Sha256: 08e59befa49be13f6af98879c4eb108ffa6dfe19d666e10e9fe444321b2097e0 2732 biom-format-tools_2.1.6+dfsg-2ubuntu2_i386.deb db8bd082e3a0b9a1241860cb31b3302110fe48736099916cefab2252652686ae 263952 python-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.ddeb 89f9dde8eba1d6ecfb08bb41f4f3432f0eb63645b46a1b5306fe3a00a8ce2d1f 10064 python-biom-format_2.1.6+dfsg-2ubuntu2_i386.buildinfo 1549f9cec3941d5c8128912c2684406a0d32523adf990717ef35388c8280dc89 178092 python-biom-format_2.1.6+dfsg-2ubuntu2_i386.deb 5b30fc6cb9fe48e1eadaeded35b966ab1d70fa3aefbfc12a3c9977db78ad92e2 245768 python3-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.ddeb a0f322711b159bd56a3377fd6d5d3e9028ee8b78f048cf7c7919651ea8147a38 169908 python3-biom-format_2.1.6+dfsg-2ubuntu2_i386.deb Files: cf28958e12f301f4a0407bf059ed241c 2732 misc optional biom-format-tools_2.1.6+dfsg-2ubuntu2_i386.deb 49e035e6a15886d441d6266fed9d10b6 263952 debug optional python-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.ddeb df11cd728f114ff24c1af19b795ed50b 10064 python optional python-biom-format_2.1.6+dfsg-2ubuntu2_i386.buildinfo ea6c7ff193f38b171c65de632fee2437 178092 python optional python-biom-format_2.1.6+dfsg-2ubuntu2_i386.deb ecf48ff5b17dd233b288d7c6a0fd2dc5 245768 debug optional python3-biom-format-dbgsym_2.1.6+dfsg-2ubuntu2_i386.ddeb 32b7bebf2bc9d30456e053a9a0d5dc1f 169908 python optional python3-biom-format_2.1.6+dfsg-2ubuntu2_i386.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ biom-format-tools_2.1.6+dfsg-2ubuntu2_i386.deb ---------------------------------------------- new debian package, version 2.0. size 2732 bytes: control archive=1132 bytes. 1770 bytes, 34 lines control 123 bytes, 2 lines md5sums Package: biom-format-tools Source: python-biom-format Version: 2.1.6+dfsg-2ubuntu2 Architecture: i386 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 13 Depends: python3-numpy (>= 1:1.14.3), python3-numpy-abi9, python3:any, python3-biom-format (= 2.1.6+dfsg-2ubuntu2) Section: misc Priority: optional Homepage: http://biom-format.org/ Description: command-line tools for BIOM format The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. . The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. . This package provides the command-line tools for the BIOM format Python package. drwxr-xr-x root/root 0 2018-11-03 16:35 ./ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/bin/ -rwxr-xr-x root/root 388 2018-11-03 16:35 ./usr/bin/biom drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/doc/biom-format-tools/ lrwxrwxrwx root/root 0 2018-11-03 16:35 ./usr/share/doc/biom-format-tools/changelog.Debian.gz -> ../python3-biom-format/changelog.Debian.gz -rw-r--r-- root/root 1612 2018-06-21 03:31 ./usr/share/doc/biom-format-tools/copyright python-biom-format_2.1.6+dfsg-2ubuntu2_i386.deb ----------------------------------------------- new debian package, version 2.0. size 178092 bytes: control archive=2616 bytes. 1917 bytes, 33 lines control 3867 bytes, 42 lines md5sums 168 bytes, 9 lines * postinst #!/bin/sh 275 bytes, 14 lines * prerm #!/bin/sh Package: python-biom-format Version: 2.1.6+dfsg-2ubuntu2 Architecture: i386 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1785 Depends: python-numpy (>= 1:1.14.3), python-numpy-abi9, pyqi, python (<< 2.8), python (>= 2.7~), python-click, python-future, python-pandas, python-scipy, python-six (>= 1.10.0), python:any (<< 2.8), python:any (>= 2.7~), libc6 (>= 2.4) Suggests: python-biom-format-doc Section: python Priority: optional Homepage: http://biom-format.org/ Description: Biological Observation Matrix (BIOM) format (Python 2) The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. . The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. . This package provides the BIOM format library for the Python 2 interpreter. drwxr-xr-x root/root 0 2018-11-03 16:35 ./ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/lib/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/lib/python2.7/dist-packages/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/lib/python2.7/dist-packages/biom/ -rw-r--r-- root/root 2520 2018-11-03 16:35 ./usr/lib/python2.7/dist-packages/biom/__init__.py -rw-r--r-- root/root 437441 2018-11-03 16:35 ./usr/lib/python2.7/dist-packages/biom/_filter.c -rw-r--r-- root/root 97424 2018-11-03 16:35 ./usr/lib/python2.7/dist-packages/biom/_filter.i386-linux-gnu.so -rw-r--r-- root/root 5039 2017-04-28 15:32 ./usr/lib/python2.7/dist-packages/biom/_filter.pyx -rw-r--r-- root/root 378584 2018-11-03 16:35 ./usr/lib/python2.7/dist-packages/biom/_subsample.c -rw-r--r-- root/root 84816 2018-11-03 16:35 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./usr/lib/python2.7/dist-packages/examples/sam_md.txt drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/doc/python-biom-format/ -rw-r--r-- root/root 1183 2018-11-03 16:35 ./usr/share/doc/python-biom-format/changelog.Debian.gz -rw-r--r-- root/root 1612 2018-06-21 03:31 ./usr/share/doc/python-biom-format/copyright python3-biom-format_2.1.6+dfsg-2ubuntu2_i386.deb ------------------------------------------------ new debian package, version 2.0. size 169908 bytes: control archive=2716 bytes. 1918 bytes, 34 lines control 3825 bytes, 42 lines md5sums 264 bytes, 12 lines * postinst #!/bin/sh 413 bytes, 12 lines * prerm #!/bin/sh Package: python3-biom-format Source: python-biom-format Version: 2.1.6+dfsg-2ubuntu2 Architecture: i386 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1746 Depends: python3-numpy (>= 1:1.14.3), python3-numpy-abi9, python3 (<< 3.8), python3 (>= 3.7~), python3-click, python3-future, python3-pandas, python3-scipy, python3-six (>= 1.10.0), python3:any, libc6 (>= 2.4) Suggests: python-biom-format-doc Section: python Priority: optional Homepage: http://biom-format.org/ Description: Biological Observation Matrix (BIOM) format (Python 3) The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. . The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. . This package provides the BIOM format library for the Python 3 interpreter. drwxr-xr-x root/root 0 2018-11-03 16:35 ./ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/lib/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/lib/python3/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/lib/python3/dist-packages/biom/ -rw-r--r-- root/root 2520 2018-11-03 16:35 ./usr/lib/python3/dist-packages/biom/__init__.py -rw-r--r-- root/root 437441 2018-11-03 16:35 ./usr/lib/python3/dist-packages/biom/_filter.c -rw-r--r-- root/root 89328 2018-11-03 16:35 ./usr/lib/python3/dist-packages/biom/_filter.cpython-37m-i386-linux-gnu.so -rw-r--r-- root/root 5039 2017-04-28 15:32 ./usr/lib/python3/dist-packages/biom/_filter.pyx -rw-r--r-- root/root 378584 2018-11-03 16:35 ./usr/lib/python3/dist-packages/biom/_subsample.c -rw-r--r-- root/root 68528 2018-11-03 16:35 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root/root 0 2018-11-03 16:35 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-11-03 16:35 ./usr/share/doc/python3-biom-format/ -rw-r--r-- root/root 1185 2018-11-03 16:35 ./usr/share/doc/python3-biom-format/changelog.Debian.gz -rw-r--r-- root/root 1612 2018-06-21 03:31 ./usr/share/doc/python3-biom-format/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: i386 Build-Space: 169940 Build-Time: 79 Distribution: disco-proposed Host Architecture: i386 Install-Time: 101 Job: python-biom-format_2.1.6+dfsg-2ubuntu2.dsc Machine Architecture: amd64 Package: python-biom-format Package-Time: 183 Source-Version: 2.1.6+dfsg-2ubuntu2 Space: 169940 Status: successful Version: 2.1.6+dfsg-2ubuntu2 -------------------------------------------------------------------------------- Finished at 20181103-1644 Build needed 00:03:03, 169940k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=i386 PACKAGEBUILD-15606673 Scanning for processes to kill in build PACKAGEBUILD-15606673