RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '847080-1962195', '/home/buildd/filecache-default/209fa22792d6e34a562fc3cbdbd1a6b59fbffc00'] Synching the system clock with the buildd NTP service... 25 Jan 02:22:03 ntpdate[1213]: adjust time server 10.122.37.1 offset -0.000110 sec Unpacking chroot for build 847080-1962195 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '847080-1962195'] Mounting chroot for build 847080-1962195 RUN: /usr/share/launchpad-buildd/slavebin/apply-ogre-model ['apply-ogre-model', '847080-1962195', 'universe'] Attempting OGRE for universe in build-847080-1962195 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '847080-1962195', 'deb http://ftpmaster.internal/ubuntu jaunty main universe'] Overriding sources.list in build-847080-1962195 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '847080-1962195'] Updating debian chroot for build 847080-1962195 Get:1 http://ftpmaster.internal jaunty Release.gpg [189B] Get:2 http://ftpmaster.internal jaunty Release [74.6kB] Get:3 http://ftpmaster.internal jaunty/main Packages [1280kB] Get:4 http://ftpmaster.internal jaunty/universe Packages [4617kB] Fetched 5971kB in 7s (816kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libvolume-id1 The following packages will be upgraded: base-files bash-completion binutils bsdutils cpp-4.3 debconf debconf-english dmsetup dpkg dpkg-dev e2fslibs e2fsprogs fakeroot g++-4.3 gcc-4.3 gcc-4.3-base initscripts lib64gcc1 libblkid1 libc6 libc6-dev libc6-dev-sparc64 libc6-sparc64 libcomerr2 libdb4.7 libdevmapper1.02.1 libgcc1 libgomp1 libncurses5 libpam-foreground libpam-modules libpam-runtime libpam0g libss2 libstdc++6 libstdc++6-4.3-dev libuuid1 login lsb-base mount ncurses-base ncurses-bin passwd perl perl-base perl-doc perl-modules pkgbinarymangler python2.5-minimal sysv-rc sysvinit-utils sysvutils util-linux 53 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0B/51.9MB of archives. After unpacking 250kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libpam-modules base-files dpkg libc6-dev-sparc64 libc6-dev libc6-sparc64 lib64gcc1 libgomp1 cpp-4.3 gcc-4.3-base libgcc1 gcc-4.3 g++-4.3 libstdc++6-4.3-dev libstdc++6 binutils libc6 libcomerr2 e2fslibs e2fsprogs login libvolume-id1 mount ncurses-bin perl-modules perl perl-base lsb-base util-linux bsdutils libncurses5 ncurses-base sysvinit-utils debconf-english debconf libpam-runtime libpam0g passwd libuuid1 libblkid1 libss2 python2.5-minimal libdevmapper1.02.1 dmsetup initscripts libdb4.7 sysv-rc bash-completion dpkg-dev fakeroot libpam-foreground perl-doc sysvutils pkgbinarymangler Authentication warning overridden. (Reading database ... 10962 files and directories currently installed.) Preparing to replace libpam-modules 1.0.1-4ubuntu5.4 (using .../libpam-modules_1.0.1-5ubuntu1_sparc.deb) ... Unpacking replacement libpam-modules ... Setting up libpam-modules (1.0.1-5ubuntu1) ... Installing new version of config file /etc/security/limits.conf ... (Reading database ... 10962 files and directories currently installed.) Preparing to replace base-files 4.0.6ubuntu1 (using .../base-files_5ubuntu1_sparc.deb) ... Unpacking replacement base-files ... Setting up base-files (5ubuntu1) ... Installing new version of config file /etc/debian_version ... (Reading database ... 10962 files and directories currently installed.) Preparing to replace dpkg 1.14.22ubuntu1 (using .../dpkg_1.14.24ubuntu1_sparc.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.14.24ubuntu1) ... (Reading database ... 10962 files and directories currently installed.) Preparing to replace libc6-dev-sparc64 2.9-0ubuntu4 (using .../libc6-dev-sparc64_2.9-0ubuntu7_sparc.deb) ... Unpacking replacement libc6-dev-sparc64 ... Preparing to replace libc6-dev 2.9-0ubuntu4 (using .../libc6-dev_2.9-0ubuntu7_sparc.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc6-sparc64 2.9-0ubuntu4 (using .../libc6-sparc64_2.9-0ubuntu7_sparc.deb) ... Unpacking replacement libc6-sparc64 ... Preparing to replace lib64gcc1 1:4.3.2-2ubuntu8 (using .../lib64gcc1_1%3a4.3.2-2ubuntu14_sparc.deb) ... Unpacking replacement lib64gcc1 ... Preparing to replace libgomp1 4.3.2-2ubuntu8 (using .../libgomp1_4.3.2-2ubuntu14_sparc.deb) ... Unpacking replacement libgomp1 ... Preparing to replace cpp-4.3 4.3.2-2ubuntu8 (using .../cpp-4.3_4.3.2-2ubuntu14_sparc.deb) ... Unpacking replacement cpp-4.3 ... Preparing to replace gcc-4.3-base 4.3.2-2ubuntu8 (using .../gcc-4.3-base_4.3.2-2ubuntu14_sparc.deb) ... Unpacking replacement gcc-4.3-base ... Preparing to replace libgcc1 1:4.3.2-2ubuntu8 (using .../libgcc1_1%3a4.3.2-2ubuntu14_sparc.deb) ... Unpacking replacement libgcc1 ... Setting up gcc-4.3-base (4.3.2-2ubuntu14) ... Setting up libgcc1 (4.3.2-2ubuntu14) ... (Reading database ... 10962 files and directories currently installed.) Preparing to replace gcc-4.3 4.3.2-2ubuntu8 (using .../gcc-4.3_4.3.2-2ubuntu14_sparc.deb) ... Unpacking replacement gcc-4.3 ... Preparing to replace g++-4.3 4.3.2-2ubuntu8 (using .../g++-4.3_4.3.2-2ubuntu14_sparc.deb) ... Unpacking replacement g++-4.3 ... Preparing to replace libstdc++6-4.3-dev 4.3.2-2ubuntu8 (using .../libstdc++6-4.3-dev_4.3.2-2ubuntu14_sparc.deb) ... Unpacking replacement libstdc++6-4.3-dev ... Preparing to replace libstdc++6 4.3.2-2ubuntu8 (using .../libstdc++6_4.3.2-2ubuntu14_sparc.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.3.2-2ubuntu14) ... (Reading database ... 10962 files and directories currently installed.) Preparing to replace binutils 2.19-0ubuntu3 (using .../binutils_2.19.0.20090110-0ubuntu1_sparc.deb) ... Unpacking replacement binutils ... Preparing to replace libc6 2.9-0ubuntu4 (using .../libc6_2.9-0ubuntu7_sparc.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.9-0ubuntu7) ... Installing new version of config file /etc/init.d/glibc.sh ... (Reading database ... 10962 files and directories currently installed.) Preparing to replace libcomerr2 1.41.3-1ubuntu1 (using .../libcomerr2_1.41.3-1ubuntu2_sparc.deb) ... Unpacking replacement libcomerr2 ... Setting up libcomerr2 (1.41.3-1ubuntu2) ... (Reading database ... 10962 files and directories currently installed.) Preparing to replace e2fslibs 1.41.3-1ubuntu1 (using .../e2fslibs_1.41.3-1ubuntu2_sparc.deb) ... Unpacking replacement e2fslibs ... Setting up e2fslibs (1.41.3-1ubuntu2) ... (Reading database ... 10962 files and directories currently installed.) Preparing to replace e2fsprogs 1.41.3-1ubuntu1 (using .../e2fsprogs_1.41.3-1ubuntu2_sparc.deb) ... Unpacking replacement e2fsprogs ... Setting up e2fsprogs (1.41.3-1ubuntu2) ... (Reading database ... 10962 files and directories currently installed.) Preparing to replace login 1:4.1.1-6ubuntu1 (using .../login_1%3a4.1.1-6ubuntu2_sparc.deb) ... Unpacking replacement login ... Setting up login (4.1.1-6ubuntu2) ... Installing new version of config file /etc/securetty ... Selecting previously deselected package libvolume-id1. (Reading database ... 10962 files and directories currently installed.) Unpacking libvolume-id1 (from .../libvolume-id1_137-1_sparc.deb) ... Setting up libvolume-id1 (137-1) ... (Reading database ... 10969 files and directories currently installed.) Preparing to replace mount 2.14-1ubuntu2 (using .../mount_2.14-1ubuntu4_sparc.deb) ... Unpacking replacement mount ... Setting up mount (2.14-1ubuntu4) ... (Reading database ... 10969 files and directories currently installed.) Preparing to replace ncurses-bin 5.7-2ubuntu1 (using .../ncurses-bin_5.7+20081220-1ubuntu1_sparc.deb) ... Unpacking replacement ncurses-bin ... Setting up ncurses-bin (5.7+20081220-1ubuntu1) ... (Reading database ... 10971 files and directories currently installed.) Preparing to replace perl-modules 5.10.0-17ubuntu2 (using .../perl-modules_5.10.0-19ubuntu1_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace perl 5.10.0-17ubuntu2 (using .../perl_5.10.0-19ubuntu1_sparc.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.10.0-17ubuntu2 (using .../perl-base_5.10.0-19ubuntu1_sparc.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.10.0-19ubuntu1) ... (Reading database ... 10971 files and directories currently installed.) Preparing to replace lsb-base 3.2-20ubuntu1 (using .../lsb-base_3.2-20ubuntu2_all.deb) ... Unpacking replacement lsb-base ... Setting up lsb-base (3.2-20ubuntu2) ... (Reading database ... 10971 files and directories currently installed.) Preparing to replace util-linux 2.14-1ubuntu2 (using .../util-linux_2.14-1ubuntu4_sparc.deb) ... Unpacking replacement util-linux ... Setting up util-linux (2.14-1ubuntu4) ... (Reading database ... 10972 files and directories currently installed.) Preparing to replace bsdutils 1:2.14-1ubuntu2 (using .../bsdutils_1%3a2.14-1ubuntu4_sparc.deb) ... Unpacking replacement bsdutils ... Setting up bsdutils (2.14-1ubuntu4) ... (Reading database ... 10972 files and directories currently installed.) Preparing to replace libncurses5 5.7-2ubuntu1 (using .../libncurses5_5.7+20081220-1ubuntu1_sparc.deb) ... Unpacking replacement libncurses5 ... Setting up libncurses5 (5.7+20081220-1ubuntu1) ... (Reading database ... 10972 files and directories currently installed.) Preparing to replace ncurses-base 5.7-2ubuntu1 (using .../ncurses-base_5.7+20081220-1ubuntu1_all.deb) ... Unpacking replacement ncurses-base ... Setting up ncurses-base (5.7+20081220-1ubuntu1) ... (Reading database ... 10972 files and directories currently installed.) Preparing to replace sysvinit-utils 2.86.ds1-61ubuntu1 (using .../sysvinit-utils_2.86.ds1-61ubuntu2_sparc.deb) ... Unpacking replacement sysvinit-utils ... Setting up sysvinit-utils (2.86.ds1-61ubuntu2) ... (Reading database ... 10972 files and directories currently installed.) Preparing to replace debconf-english 1.5.24ubuntu1 (using .../debconf-english_1.5.24ubuntu2_all.deb) ... Unpacking replacement debconf-english ... Preparing to replace debconf 1.5.24ubuntu1 (using .../debconf_1.5.24ubuntu2_all.deb) ... Unpacking replacement debconf ... Preparing to replace libpam-runtime 1.0.1-4ubuntu5.4 (using .../libpam-runtime_1.0.1-5ubuntu1_all.deb) ... Unpacking replacement libpam-runtime ... Setting up debconf-english (1.5.24ubuntu2) ... Setting up debconf (1.5.24ubuntu2) ... Setting up libpam-runtime (1.0.1-5ubuntu1) ... (Reading database ... 10972 files and directories currently installed.) Preparing to replace libpam0g 1.0.1-4ubuntu5.4 (using .../libpam0g_1.0.1-5ubuntu1_sparc.deb) ... Unpacking replacement libpam0g ... Setting up libpam0g (1.0.1-5ubuntu1) ... (Reading database ... 10972 files and directories currently installed.) Preparing to replace passwd 1:4.1.1-6ubuntu1 (using .../passwd_1%3a4.1.1-6ubuntu2_sparc.deb) ... Unpacking replacement passwd ... Preparing to replace libuuid1 1.41.3-1ubuntu1 (using .../libuuid1_1.41.3-1ubuntu2_sparc.deb) ... Unpacking replacement libuuid1 ... Setting up passwd (4.1.1-6ubuntu2) ... Setting up libuuid1 (1.41.3-1ubuntu2) ... (Reading database ... 10972 files and directories currently installed.) Preparing to replace libblkid1 1.41.3-1ubuntu1 (using .../libblkid1_1.41.3-1ubuntu2_sparc.deb) ... Unpacking replacement libblkid1 ... Setting up libblkid1 (1.41.3-1ubuntu2) ... (Reading database ... 10972 files and directories currently installed.) Preparing to replace libss2 1.41.3-1ubuntu1 (using .../libss2_1.41.3-1ubuntu2_sparc.deb) ... Unpacking replacement libss2 ... Setting up libss2 (1.41.3-1ubuntu2) ... (Reading database ... 10972 files and directories currently installed.) Preparing to replace python2.5-minimal 2.5.2-14ubuntu1 (using .../python2.5-minimal_2.5.4-0ubuntu1_sparc.deb) ... Unpacking replacement python2.5-minimal ... Setting up python2.5-minimal (2.5.4-0ubuntu1) ... (Reading database ... 10972 files and directories currently installed.) Preparing to replace libdevmapper1.02.1 2:1.02.27-4ubuntu1 (using .../libdevmapper1.02.1_2%3a1.02.27-4ubuntu3_sparc.deb) ... Unpacking replacement libdevmapper1.02.1 ... Preparing to replace dmsetup 2:1.02.27-4ubuntu1 (using .../dmsetup_2%3a1.02.27-4ubuntu3_sparc.deb) ... Unpacking replacement dmsetup ... Preparing to replace initscripts 2.86.ds1-61ubuntu1 (using .../initscripts_2.86.ds1-61ubuntu2_sparc.deb) ... Unpacking replacement initscripts ... Preparing to replace libdb4.7 4.7.25-5ubuntu1 (using .../libdb4.7_4.7.25-6ubuntu1_sparc.deb) ... Unpacking replacement libdb4.7 ... Preparing to replace sysv-rc 2.86.ds1-61ubuntu1 (using .../sysv-rc_2.86.ds1-61ubuntu2_all.deb) ... Unpacking replacement sysv-rc ... Preparing to replace bash-completion 20060301-4ubuntu2 (using .../bash-completion_20080705ubuntu2_all.deb) ... Unpacking replacement bash-completion ... Preparing to replace dpkg-dev 1.14.22ubuntu1 (using .../dpkg-dev_1.14.24ubuntu1_all.deb) ... Unpacking replacement dpkg-dev ... Preparing to replace fakeroot 1.11ubuntu1 (using .../fakeroot_1.12.1ubuntu1_sparc.deb) ... Unpacking replacement fakeroot ... Preparing to replace libpam-foreground 0.4-1 (using .../libpam-foreground_0.5_sparc.deb) ... Unpacking replacement libpam-foreground ... Preparing to replace perl-doc 5.10.0-17ubuntu2 (using .../perl-doc_5.10.0-19ubuntu1_all.deb) ... Leaving `diversion of /usr/bin/perldoc to /usr/bin/perldoc.stub by perl-doc' Unpacking replacement perl-doc ... Preparing to replace sysvutils 2.86.ds1-61ubuntu1 (using .../sysvutils_2.86.ds1-61ubuntu2_all.deb) ... Unpacking replacement sysvutils ... Preparing to replace pkgbinarymangler 50 (using .../pkgbinarymangler_51_all.deb) ... Unpacking replacement pkgbinarymangler ... Setting up libc6-sparc64 (2.9-0ubuntu7) ... Setting up libc6-dev (2.9-0ubuntu7) ... Setting up libc6-dev-sparc64 (2.9-0ubuntu7) ... Setting up lib64gcc1 (4.3.2-2ubuntu14) ... Setting up libgomp1 (4.3.2-2ubuntu14) ... Setting up cpp-4.3 (4.3.2-2ubuntu14) ... Setting up binutils (2.19.0.20090110-0ubuntu1) ... Setting up gcc-4.3 (4.3.2-2ubuntu14) ... Setting up libdevmapper1.02.1 (1.02.27-4ubuntu3) ... Setting up dmsetup (1.02.27-4ubuntu3) ... Setting up initscripts (2.86.ds1-61ubuntu2) ... Setting up libdb4.7 (4.7.25-6ubuntu1) ... Setting up sysv-rc (2.86.ds1-61ubuntu2) ... Setting up bash-completion (20080705ubuntu2) ... Installing new version of config file /etc/bash_completion ... Setting up fakeroot (1.12.1ubuntu1) ... Setting up libpam-foreground (0.5) ... Setting up sysvutils (2.86.ds1-61ubuntu2) ... Setting up pkgbinarymangler (51) ... Setting up g++-4.3 (4.3.2-2ubuntu14) ... Setting up perl-modules (5.10.0-19ubuntu1) ... Setting up libstdc++6-4.3-dev (4.3.2-2ubuntu14) ... Setting up perl (5.10.0-19ubuntu1) ... Setting up dpkg-dev (1.14.24ubuntu1) ... Setting up perl-doc (5.10.0-19ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '847080-1962195', '--nolog', '--batch', '--archive=ubuntu', '--purpose=PRIMARY', '--dist=jaunty', '--comp=universe', 'python-biopython_1.49-1.dsc'] Initiating build Automatic build of python-biopython_1.49-1 on artigas by sbuild/sparc 1.170.5 Build started at 20090125-0223 ****************************************************************************** python-biopython_1.49-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 7), quilt, python-all-dev, flex, python-support, python-reportlab, python-numpy, python-egenix-mxtexttools, python-mysqldb, wise Checking for already installed source dependencies... debhelper: missing quilt: missing python-all-dev: missing flex: missing python-support: missing python-reportlab: missing python-numpy: missing python-egenix-mxtexttools: missing python-mysqldb: missing wise: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper quilt python-all-dev flex python-support python-reportlab python-numpy python-egenix-mxtexttools python-mysqldb wise Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: dmsetup libdevmapper1.02.1 upstart-compat-sysv startup-tasks system-services ucf sysvutils upstart perl-doc Use 'apt-get autoremove' to remove them. The following extra packages will be installed: bsdmainutils diffstat file gettext gettext-base groff-base html2text intltool-debian libcroco3 libdb4.2 libglib1.2ldbl libglib2.0-0 libmagic1 libmysqlclient15off libncursesw5 libreadline5 libsqlite3-0 libssl0.9.8 libxml2 m4 man-db mime-support mysql-common po-debconf python python-all python-central python-dev python-egenix-mxtools python2.4 python2.4-dev python2.4-minimal python2.5 python2.5-dev readline-common Suggested packages: wamerican wordlist whois vacation dh-make bison cvs gettext-doc groff less www-browser libmail-box-perl python-doc python-tk python-profiler python-egenix-mxtexttools-dbg python-egenix-mxtools-dbg python-egenix-mxdatetime mysql-server-5.0 mysql-server python-mysqldb-dbg python-numpy-doc python-numpy-dbg pdf-viewer python-reportlab-doc python2.4-doc binfmt-support python2.5-doc procmail graphviz Recommended packages: curl wget lynx libglib2.0-data libgpm2 xml-core libmail-sendmail-perl libcompress-zlib-perl python-reportlab-accel python-renderpm python-imaging wise-doc The following NEW packages will be installed: bsdmainutils debhelper diffstat file flex gettext gettext-base groff-base html2text intltool-debian libcroco3 libdb4.2 libglib1.2ldbl libglib2.0-0 libmagic1 libmysqlclient15off libncursesw5 libreadline5 libsqlite3-0 libssl0.9.8 libxml2 m4 man-db mime-support mysql-common po-debconf python python-all python-all-dev python-central python-dev python-egenix-mxtexttools python-egenix-mxtools python-mysqldb python-numpy python-reportlab python-support python2.4 python2.4-dev python2.4-minimal python2.5 python2.5-dev quilt readline-common wise 0 upgraded, 45 newly installed, 0 to remove and 0 not upgraded. Need to get 5739kB/31.7MB of archives. After unpacking 101MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! m4 flex libmagic1 file libncursesw5 readline-common libreadline5 libsqlite3-0 libssl0.9.8 mime-support libdb4.2 python2.5 python bsdmainutils gettext-base groff-base libxml2 man-db python-central python-support html2text libglib2.0-0 libcroco3 gettext intltool-debian po-debconf debhelper diffstat libglib1.2ldbl mysql-common libmysqlclient15off python2.4-minimal python2.4 python-all python2.5-dev python-dev python2.4-dev python-all-dev python-egenix-mxtools python-egenix-mxtexttools python-mysqldb python-numpy python-reportlab quilt wise Authentication warning overridden. Get:1 http://ftpmaster.internal jaunty/universe libglib1.2ldbl 1.2.10-19build1 [124kB] Get:2 http://ftpmaster.internal jaunty/main python-egenix-mxtools 3.1.1-1 [511kB] Get:3 http://ftpmaster.internal jaunty/main python-egenix-mxtexttools 3.1.1-1 [600kB] Get:4 http://ftpmaster.internal jaunty/main python-mysqldb 1.2.2-7 [94.9kB] Get:5 http://ftpmaster.internal jaunty/main python-reportlab 2.2-2 [507kB] Get:6 http://ftpmaster.internal jaunty/universe wise 2.4.1-5 [3902kB] Fetched 5739kB in 0s (10.5MB/s) Selecting previously deselected package m4. (Reading database ... 10974 files and directories currently installed.) Unpacking m4 (from .../archives/m4_1.4.11-1_sparc.deb) ... Selecting previously deselected package flex. Unpacking flex (from .../flex_2.5.35-6ubuntu1_sparc.deb) ... Selecting previously deselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_4.26-2_sparc.deb) ... Selecting previously deselected package file. Unpacking file (from .../archives/file_4.26-2_sparc.deb) ... Selecting previously deselected package libncursesw5. Unpacking libncursesw5 (from .../libncursesw5_5.7+20081220-1ubuntu1_sparc.deb) ... Selecting previously deselected package readline-common. Unpacking readline-common (from .../readline-common_5.2-3build1_all.deb) ... Selecting previously deselected package libreadline5. Unpacking libreadline5 (from .../libreadline5_5.2-3build1_sparc.deb) ... Selecting previously deselected package libsqlite3-0. Unpacking libsqlite3-0 (from .../libsqlite3-0_3.5.9-6_sparc.deb) ... Selecting previously deselected package libssl0.9.8. Unpacking libssl0.9.8 (from .../libssl0.9.8_0.9.8g-15ubuntu1_sparc.deb) ... Selecting previously deselected package mime-support. Unpacking mime-support (from .../mime-support_3.44-1_all.deb) ... Selecting previously deselected package libdb4.2. Unpacking libdb4.2 (from .../libdb4.2_4.2.52+dfsg-5_sparc.deb) ... Selecting previously deselected package python2.5. Unpacking python2.5 (from .../python2.5_2.5.4-0ubuntu1_sparc.deb) ... Selecting previously deselected package python. Unpacking python (from .../python_2.5.2-3ubuntu1_all.deb) ... Selecting previously deselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_6.1.10ubuntu3_sparc.deb) ... Selecting previously deselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.17-6ubuntu1_sparc.deb) ... Selecting previously deselected package groff-base. Unpacking groff-base (from .../groff-base_1.18.1.1-21_sparc.deb) ... Selecting previously deselected package libxml2. Unpacking libxml2 (from .../libxml2_2.6.32.dfsg-5ubuntu1_sparc.deb) ... Selecting previously deselected package man-db. Unpacking man-db (from .../man-db_2.5.3-2_sparc.deb) ... Selecting previously deselected package python-central. Unpacking python-central (from .../python-central_0.6.7ubuntu1_all.deb) ... Selecting previously deselected package python-support. Unpacking python-support (from .../python-support_0.8.7_all.deb) ... Selecting previously deselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-5_sparc.deb) ... Selecting previously deselected package libglib2.0-0. Unpacking libglib2.0-0 (from .../libglib2.0-0_2.19.5-0ubuntu1_sparc.deb) ... Selecting previously deselected package libcroco3. Unpacking libcroco3 (from .../libcroco3_0.6.1-2_sparc.deb) ... Selecting previously deselected package gettext. Unpacking gettext (from .../gettext_0.17-6ubuntu1_sparc.deb) ... Selecting previously deselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously deselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.15ubuntu1_all.deb) ... Selecting previously deselected package debhelper. Unpacking debhelper (from .../debhelper_7.0.17ubuntu2_all.deb) ... Selecting previously deselected package diffstat. 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Setting up gettext-base (0.17-6ubuntu1) ... Setting up groff-base (1.18.1.1-21) ... Setting up libxml2 (2.6.32.dfsg-5ubuntu1) ... Setting up man-db (2.5.3-2) ... Building database of manual pages ... ... skipping, since this is a buildd Setting up python-central (0.6.7ubuntu1) ... Setting up python-support (0.8.7) ... Setting up html2text (1.3.2a-5) ... Setting up libglib2.0-0 (2.19.5-0ubuntu1) ... Setting up libcroco3 (0.6.1-2) ... Setting up gettext (0.17-6ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.15ubuntu1) ... Setting up debhelper (7.0.17ubuntu2) ... Setting up diffstat (1.46-1) ... Setting up libglib1.2ldbl (1.2.10-19build1) ... Setting up mysql-common (5.1.30really5.0.75-0ubuntu3) ... Setting up libmysqlclient15off (5.1.30really5.0.75-0ubuntu3) ... Setting up python2.4-minimal (2.4.6-1ubuntu1) ... Setting up python2.4 (2.4.6-1ubuntu1) ... Setting up python-all (2.5.2-3ubuntu1) ... Setting up python2.5-dev (2.5.4-0ubuntu1) ... Setting up python-dev (2.5.2-3ubuntu1) ... Setting up python2.4-dev (2.4.6-1ubuntu1) ... Setting up python-all-dev (2.5.2-3ubuntu1) ... Setting up python-egenix-mxtools (3.1.1-1) ... Setting up python-egenix-mxtexttools (3.1.1-1) ... Setting up python-mysqldb (1.2.2-7) ... Setting up python-numpy (1.1.1-2ubuntu1) ... Setting up python-reportlab (2.2-2) ... Setting up quilt (0.46-6) ... Setting up wise (2.4.1-5) ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.9-0ubuntu7 make_3.81-5 dpkg-dev_1.14.24ubuntu1 g++-4.3_4.3.2-2ubuntu14 gcc-4.3_4.3.2-2ubuntu14 binutils_2.19.0.20090110-0ubuntu1 libstdc++6_4.3.2-2ubuntu14 libstdc++6-4.3-dev_4.3.2-2ubuntu14 ------------------------------------------------------------------------------ dpkg-source: extracting python-biopython in python-biopython-1.49 dpkg-source: unpacking python-biopython_1.49.orig.tar.gz dpkg-source: applying /home/buildd/build-847080-1962195/python-biopython_1.49-1.diff.gz dpkg-buildpackage: set CFLAGS to default value: -g -O2 dpkg-buildpackage: set CPPFLAGS to default value: dpkg-buildpackage: set LDFLAGS to default value: -Wl,-Bsymbolic-functions dpkg-buildpackage: set FFLAGS to default value: -g -O2 dpkg-buildpackage: set CXXFLAGS to default value: -g -O2 dpkg-buildpackage: source package python-biopython dpkg-buildpackage: source version 1.49-1 dpkg-buildpackage: host architecture sparc /usr/bin/fakeroot debian/rules clean QUILT_PATCHES=debian/patches quilt --quiltrc /dev/null pop -a -R || test $? = 2 No patch removed rm -rf .pc debian/stamp-patched dh_testdir dh_testroot python2.5 setup.py clean running clean rm -f -r debian/python2.5-tmp dh_testdir dh_testroot python2.4 setup.py clean running clean rm -f -r debian/python2.4-tmp dh_testdir dh_testroot dh_clean rm -f build-stamp rm -f Martel/*.pyc rm -f Tests/*.pyc rm -f Tests/Graphics/*.eps rm -f Tests/Graphics/*.pdf rm -f Tests/dump rm -f Tests/NeuralNetwork/patternio.txt rm -f -r Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa.idx rm -f -r build debian/rules build # quilt exits with 2 as return when there was nothing to do. # That's not an error here (but it's useful to break loops in crude scripts) QUILT_PATCHES=debian/patches quilt --quiltrc /dev/null push -a || test $? = 2 Applying patch 01-enable-mmCIF.patch patching file setup.py Applying patch 02-fix-wise-test.patch patching file Tests/test_Wise.py patching file Tests/output/test_Wise Now at patch 02-fix-wise-test.patch touch debian/stamp-patched echo sparc sparc yes | python2.5 setup.py build running build running build_py creating build creating build/lib.linux-sparc-2.5 creating build/lib.linux-sparc-2.5/Bio copying Bio/Transcribe.py -> build/lib.linux-sparc-2.5/Bio copying Bio/pairwise2.py -> build/lib.linux-sparc-2.5/Bio copying Bio/MarkovModel.py -> build/lib.linux-sparc-2.5/Bio copying Bio/Search.py -> build/lib.linux-sparc-2.5/Bio copying Bio/EZRetrieve.py -> build/lib.linux-sparc-2.5/Bio copying Bio/DocSQL.py -> build/lib.linux-sparc-2.5/Bio copying Bio/mathfns.py -> build/lib.linux-sparc-2.5/Bio copying Bio/utils.py -> build/lib.linux-sparc-2.5/Bio copying Bio/StdHandler.py -> build/lib.linux-sparc-2.5/Bio copying Bio/SeqFeature.py -> build/lib.linux-sparc-2.5/Bio copying Bio/Translate.py -> build/lib.linux-sparc-2.5/Bio copying Bio/HotRand.py -> build/lib.linux-sparc-2.5/Bio copying Bio/MaxEntropy.py -> build/lib.linux-sparc-2.5/Bio copying Bio/File.py -> build/lib.linux-sparc-2.5/Bio copying Bio/Seq.py -> build/lib.linux-sparc-2.5/Bio copying Bio/Std.py -> build/lib.linux-sparc-2.5/Bio copying Bio/DBXRef.py -> build/lib.linux-sparc-2.5/Bio copying Bio/distance.py -> build/lib.linux-sparc-2.5/Bio copying Bio/FilteredReader.py -> build/lib.linux-sparc-2.5/Bio copying Bio/stringfns.py -> build/lib.linux-sparc-2.5/Bio copying Bio/__init__.py -> build/lib.linux-sparc-2.5/Bio copying Bio/ParserSupport.py -> build/lib.linux-sparc-2.5/Bio copying Bio/Index.py -> build/lib.linux-sparc-2.5/Bio copying Bio/NetCatch.py -> build/lib.linux-sparc-2.5/Bio copying Bio/SeqRecord.py -> build/lib.linux-sparc-2.5/Bio copying Bio/PubMed.py -> build/lib.linux-sparc-2.5/Bio copying Bio/NaiveBayes.py -> build/lib.linux-sparc-2.5/Bio copying Bio/ExPASy.py -> build/lib.linux-sparc-2.5/Bio copying Bio/listfns.py -> build/lib.linux-sparc-2.5/Bio copying Bio/Writer.py -> build/lib.linux-sparc-2.5/Bio copying Bio/triefind.py -> build/lib.linux-sparc-2.5/Bio copying Bio/Decode.py -> build/lib.linux-sparc-2.5/Bio copying Bio/LogisticRegression.py -> build/lib.linux-sparc-2.5/Bio copying Bio/kNN.py -> build/lib.linux-sparc-2.5/Bio copying Bio/PropertyManager.py -> build/lib.linux-sparc-2.5/Bio creating build/lib.linux-sparc-2.5/Bio/Align copying Bio/Align/AlignInfo.py -> build/lib.linux-sparc-2.5/Bio/Align copying Bio/Align/FormatConvert.py -> build/lib.linux-sparc-2.5/Bio/Align copying Bio/Align/__init__.py -> build/lib.linux-sparc-2.5/Bio/Align copying Bio/Align/Generic.py -> build/lib.linux-sparc-2.5/Bio/Align creating build/lib.linux-sparc-2.5/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-sparc-2.5/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-sparc-2.5/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-sparc-2.5/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-sparc-2.5/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-sparc-2.5/Bio/AlignIO copying Bio/AlignIO/__init__.py -> build/lib.linux-sparc-2.5/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-sparc-2.5/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-sparc-2.5/Bio/AlignIO creating build/lib.linux-sparc-2.5/Bio/AlignAce copying Bio/AlignAce/Motif.py -> build/lib.linux-sparc-2.5/Bio/AlignAce copying Bio/AlignAce/__init__.py -> build/lib.linux-sparc-2.5/Bio/AlignAce copying Bio/AlignAce/Parser.py -> build/lib.linux-sparc-2.5/Bio/AlignAce copying Bio/AlignAce/CompareAceStandalone.py -> build/lib.linux-sparc-2.5/Bio/AlignAce copying Bio/AlignAce/AlignAceStandalone.py -> build/lib.linux-sparc-2.5/Bio/AlignAce copying Bio/AlignAce/Applications.py -> build/lib.linux-sparc-2.5/Bio/AlignAce copying Bio/AlignAce/Scanner.py -> build/lib.linux-sparc-2.5/Bio/AlignAce creating build/lib.linux-sparc-2.5/Bio/Alphabet copying Bio/Alphabet/__init__.py -> build/lib.linux-sparc-2.5/Bio/Alphabet copying Bio/Alphabet/IUPAC.py -> build/lib.linux-sparc-2.5/Bio/Alphabet copying Bio/Alphabet/Reduced.py -> build/lib.linux-sparc-2.5/Bio/Alphabet creating build/lib.linux-sparc-2.5/Bio/Application copying Bio/Application/__init__.py -> build/lib.linux-sparc-2.5/Bio/Application creating build/lib.linux-sparc-2.5/Bio/Blast copying Bio/Blast/NCBIStandalone.py -> build/lib.linux-sparc-2.5/Bio/Blast copying Bio/Blast/__init__.py -> build/lib.linux-sparc-2.5/Bio/Blast copying Bio/Blast/NCBIWWW.py -> build/lib.linux-sparc-2.5/Bio/Blast copying Bio/Blast/NCBIXML.py -> build/lib.linux-sparc-2.5/Bio/Blast copying Bio/Blast/Applications.py -> build/lib.linux-sparc-2.5/Bio/Blast copying Bio/Blast/ParseBlastTable.py -> build/lib.linux-sparc-2.5/Bio/Blast copying Bio/Blast/Record.py -> build/lib.linux-sparc-2.5/Bio/Blast creating build/lib.linux-sparc-2.5/Bio/CAPS copying Bio/CAPS/__init__.py -> build/lib.linux-sparc-2.5/Bio/CAPS creating build/lib.linux-sparc-2.5/Bio/Compass copying Bio/Compass/__init__.py -> build/lib.linux-sparc-2.5/Bio/Compass creating build/lib.linux-sparc-2.5/Bio/Clustalw copying Bio/Clustalw/__init__.py -> build/lib.linux-sparc-2.5/Bio/Clustalw creating build/lib.linux-sparc-2.5/Bio/Crystal copying Bio/Crystal/__init__.py -> build/lib.linux-sparc-2.5/Bio/Crystal creating build/lib.linux-sparc-2.5/Bio/Data copying Bio/Data/IUPACData.py -> build/lib.linux-sparc-2.5/Bio/Data copying Bio/Data/CodonTable.py -> build/lib.linux-sparc-2.5/Bio/Data copying Bio/Data/__init__.py -> build/lib.linux-sparc-2.5/Bio/Data creating build/lib.linux-sparc-2.5/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-sparc-2.5/Bio/Emboss copying Bio/Emboss/Primer.py -> build/lib.linux-sparc-2.5/Bio/Emboss copying Bio/Emboss/__init__.py -> build/lib.linux-sparc-2.5/Bio/Emboss copying Bio/Emboss/primer3_format.py -> build/lib.linux-sparc-2.5/Bio/Emboss copying Bio/Emboss/Primer3.py -> build/lib.linux-sparc-2.5/Bio/Emboss copying Bio/Emboss/Applications.py -> build/lib.linux-sparc-2.5/Bio/Emboss copying Bio/Emboss/primersearch_format.py -> build/lib.linux-sparc-2.5/Bio/Emboss creating build/lib.linux-sparc-2.5/Bio/Encodings copying Bio/Encodings/IUPACEncoding.py -> build/lib.linux-sparc-2.5/Bio/Encodings copying Bio/Encodings/__init__.py -> build/lib.linux-sparc-2.5/Bio/Encodings creating build/lib.linux-sparc-2.5/Bio/Entrez copying Bio/Entrez/__init__.py -> build/lib.linux-sparc-2.5/Bio/Entrez copying Bio/Entrez/Parser.py -> build/lib.linux-sparc-2.5/Bio/Entrez copying Bio/Entrez/SerialSet.py -> build/lib.linux-sparc-2.5/Bio/Entrez creating build/lib.linux-sparc-2.5/Bio/Enzyme copying Bio/Enzyme/__init__.py -> build/lib.linux-sparc-2.5/Bio/Enzyme creating build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/ThinClient.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/ReseekFile.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/Datatypes.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/POM.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/parse.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/Mixins.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/__init__.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/HistoryClient.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/DBIdsClient.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/setup.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/Config.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/dtd2py.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/sourcegen.py -> build/lib.linux-sparc-2.5/Bio/EUtils copying Bio/EUtils/MultiDict.py -> build/lib.linux-sparc-2.5/Bio/EUtils creating build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eSearch_020511.py -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eSummary_020511.py -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eLink_020511.py -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/__init__.py -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eInfo_020511.py -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/ePost_020511.py -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/LinkOut.py -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs creating build/lib.linux-sparc-2.5/Bio/Fasta copying Bio/Fasta/FastaAlign.py -> build/lib.linux-sparc-2.5/Bio/Fasta copying Bio/Fasta/__init__.py -> build/lib.linux-sparc-2.5/Bio/Fasta creating build/lib.linux-sparc-2.5/Bio/FSSP copying Bio/FSSP/fssp_rec.py -> build/lib.linux-sparc-2.5/Bio/FSSP copying Bio/FSSP/FSSPTools.py -> build/lib.linux-sparc-2.5/Bio/FSSP copying Bio/FSSP/__init__.py -> build/lib.linux-sparc-2.5/Bio/FSSP creating build/lib.linux-sparc-2.5/Bio/GA copying Bio/GA/Evolver.py -> build/lib.linux-sparc-2.5/Bio/GA copying Bio/GA/__init__.py -> build/lib.linux-sparc-2.5/Bio/GA copying Bio/GA/Organism.py -> build/lib.linux-sparc-2.5/Bio/GA creating build/lib.linux-sparc-2.5/Bio/GA/Crossover copying Bio/GA/Crossover/GeneralPoint.py -> build/lib.linux-sparc-2.5/Bio/GA/Crossover copying Bio/GA/Crossover/Point.py -> build/lib.linux-sparc-2.5/Bio/GA/Crossover copying Bio/GA/Crossover/__init__.py -> build/lib.linux-sparc-2.5/Bio/GA/Crossover copying Bio/GA/Crossover/TwoPoint.py -> build/lib.linux-sparc-2.5/Bio/GA/Crossover copying Bio/GA/Crossover/General.py -> build/lib.linux-sparc-2.5/Bio/GA/Crossover copying Bio/GA/Crossover/Uniform.py -> build/lib.linux-sparc-2.5/Bio/GA/Crossover creating build/lib.linux-sparc-2.5/Bio/GA/Mutation copying Bio/GA/Mutation/Simple.py -> build/lib.linux-sparc-2.5/Bio/GA/Mutation copying Bio/GA/Mutation/__init__.py -> build/lib.linux-sparc-2.5/Bio/GA/Mutation copying Bio/GA/Mutation/General.py -> build/lib.linux-sparc-2.5/Bio/GA/Mutation creating build/lib.linux-sparc-2.5/Bio/GA/Repair copying Bio/GA/Repair/__init__.py -> build/lib.linux-sparc-2.5/Bio/GA/Repair copying Bio/GA/Repair/Stabilizing.py -> build/lib.linux-sparc-2.5/Bio/GA/Repair creating build/lib.linux-sparc-2.5/Bio/GA/Selection copying Bio/GA/Selection/Diversity.py -> build/lib.linux-sparc-2.5/Bio/GA/Selection copying Bio/GA/Selection/RouletteWheel.py -> build/lib.linux-sparc-2.5/Bio/GA/Selection copying Bio/GA/Selection/Abstract.py -> build/lib.linux-sparc-2.5/Bio/GA/Selection copying Bio/GA/Selection/__init__.py -> build/lib.linux-sparc-2.5/Bio/GA/Selection copying Bio/GA/Selection/Tournament.py -> build/lib.linux-sparc-2.5/Bio/GA/Selection creating build/lib.linux-sparc-2.5/Bio/GenBank copying Bio/GenBank/utils.py -> build/lib.linux-sparc-2.5/Bio/GenBank copying Bio/GenBank/LocationParser.py -> build/lib.linux-sparc-2.5/Bio/GenBank copying Bio/GenBank/__init__.py -> build/lib.linux-sparc-2.5/Bio/GenBank copying Bio/GenBank/Scanner.py -> build/lib.linux-sparc-2.5/Bio/GenBank copying Bio/GenBank/Record.py -> build/lib.linux-sparc-2.5/Bio/GenBank creating build/lib.linux-sparc-2.5/Bio/Geo copying Bio/Geo/__init__.py -> build/lib.linux-sparc-2.5/Bio/Geo copying Bio/Geo/Record.py -> build/lib.linux-sparc-2.5/Bio/Geo creating build/lib.linux-sparc-2.5/Bio/GFF copying Bio/GFF/easy.py -> build/lib.linux-sparc-2.5/Bio/GFF copying Bio/GFF/GenericTools.py -> build/lib.linux-sparc-2.5/Bio/GFF copying Bio/GFF/__init__.py -> build/lib.linux-sparc-2.5/Bio/GFF copying Bio/GFF/binning.py -> build/lib.linux-sparc-2.5/Bio/GFF creating build/lib.linux-sparc-2.5/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-sparc-2.5/Bio/Graphics copying Bio/Graphics/__init__.py -> build/lib.linux-sparc-2.5/Bio/Graphics copying Bio/Graphics/Distribution.py -> build/lib.linux-sparc-2.5/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-sparc-2.5/Bio/Graphics copying Bio/Graphics/Comparative.py -> build/lib.linux-sparc-2.5/Bio/Graphics creating build/lib.linux-sparc-2.5/Bio/HMM copying Bio/HMM/MarkovModel.py -> build/lib.linux-sparc-2.5/Bio/HMM copying Bio/HMM/Utilities.py -> build/lib.linux-sparc-2.5/Bio/HMM copying Bio/HMM/__init__.py -> build/lib.linux-sparc-2.5/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-sparc-2.5/Bio/HMM copying Bio/HMM/Trainer.py -> build/lib.linux-sparc-2.5/Bio/HMM creating build/lib.linux-sparc-2.5/Bio/IntelliGenetics copying Bio/IntelliGenetics/__init__.py -> build/lib.linux-sparc-2.5/Bio/IntelliGenetics copying Bio/IntelliGenetics/Record.py -> build/lib.linux-sparc-2.5/Bio/IntelliGenetics copying Bio/IntelliGenetics/intelligenetics_format.py -> build/lib.linux-sparc-2.5/Bio/IntelliGenetics creating build/lib.linux-sparc-2.5/Bio/InterPro copying Bio/InterPro/__init__.py -> build/lib.linux-sparc-2.5/Bio/InterPro creating build/lib.linux-sparc-2.5/Bio/KEGG copying Bio/KEGG/__init__.py -> build/lib.linux-sparc-2.5/Bio/KEGG creating build/lib.linux-sparc-2.5/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-sparc-2.5/Bio/KEGG/Compound creating build/lib.linux-sparc-2.5/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-sparc-2.5/Bio/KEGG/Enzyme creating build/lib.linux-sparc-2.5/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> build/lib.linux-sparc-2.5/Bio/KEGG/Map creating build/lib.linux-sparc-2.5/Bio/Medline copying Bio/Medline/__init__.py -> build/lib.linux-sparc-2.5/Bio/Medline creating build/lib.linux-sparc-2.5/Bio/MEME copying Bio/MEME/Motif.py -> build/lib.linux-sparc-2.5/Bio/MEME copying Bio/MEME/__init__.py -> build/lib.linux-sparc-2.5/Bio/MEME copying Bio/MEME/Parser.py -> build/lib.linux-sparc-2.5/Bio/MEME creating build/lib.linux-sparc-2.5/Bio/MetaTool copying Bio/MetaTool/Input.py -> build/lib.linux-sparc-2.5/Bio/MetaTool copying Bio/MetaTool/__init__.py -> build/lib.linux-sparc-2.5/Bio/MetaTool copying Bio/MetaTool/metatool_format.py -> build/lib.linux-sparc-2.5/Bio/MetaTool copying Bio/MetaTool/Record.py -> build/lib.linux-sparc-2.5/Bio/MetaTool creating build/lib.linux-sparc-2.5/Bio/Mindy copying Bio/Mindy/compression.py -> build/lib.linux-sparc-2.5/Bio/Mindy copying Bio/Mindy/Location.py -> build/lib.linux-sparc-2.5/Bio/Mindy copying Bio/Mindy/BaseDB.py -> build/lib.linux-sparc-2.5/Bio/Mindy copying Bio/Mindy/SimpleSeqRecord.py -> build/lib.linux-sparc-2.5/Bio/Mindy copying Bio/Mindy/__init__.py -> build/lib.linux-sparc-2.5/Bio/Mindy copying Bio/Mindy/FlatDB.py -> build/lib.linux-sparc-2.5/Bio/Mindy copying Bio/Mindy/BerkeleyDB.py -> build/lib.linux-sparc-2.5/Bio/Mindy copying Bio/Mindy/XPath.py -> build/lib.linux-sparc-2.5/Bio/Mindy creating build/lib.linux-sparc-2.5/Bio/NBRF copying Bio/NBRF/nbrf_format.py -> build/lib.linux-sparc-2.5/Bio/NBRF copying Bio/NBRF/ValSeq.py -> build/lib.linux-sparc-2.5/Bio/NBRF copying Bio/NBRF/__init__.py -> build/lib.linux-sparc-2.5/Bio/NBRF copying Bio/NBRF/Record.py -> build/lib.linux-sparc-2.5/Bio/NBRF creating build/lib.linux-sparc-2.5/Bio/Ndb copying Bio/Ndb/__init__.py -> build/lib.linux-sparc-2.5/Bio/Ndb creating build/lib.linux-sparc-2.5/Bio/NeuralNetwork copying Bio/NeuralNetwork/__init__.py -> build/lib.linux-sparc-2.5/Bio/NeuralNetwork copying Bio/NeuralNetwork/Training.py -> build/lib.linux-sparc-2.5/Bio/NeuralNetwork copying Bio/NeuralNetwork/StopTraining.py -> build/lib.linux-sparc-2.5/Bio/NeuralNetwork creating build/lib.linux-sparc-2.5/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/__init__.py -> build/lib.linux-sparc-2.5/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/Layer.py -> build/lib.linux-sparc-2.5/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/Network.py -> build/lib.linux-sparc-2.5/Bio/NeuralNetwork/BackPropagation creating build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Motif.py -> build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Schema.py -> build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/__init__.py -> build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Pattern.py -> build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Signature.py -> build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Gene creating build/lib.linux-sparc-2.5/Bio/Nexus copying Bio/Nexus/Nexus.py -> build/lib.linux-sparc-2.5/Bio/Nexus copying Bio/Nexus/__init__.py -> build/lib.linux-sparc-2.5/Bio/Nexus copying Bio/Nexus/Trees.py -> build/lib.linux-sparc-2.5/Bio/Nexus copying Bio/Nexus/Nodes.py -> build/lib.linux-sparc-2.5/Bio/Nexus creating build/lib.linux-sparc-2.5/Bio/NMR copying Bio/NMR/NOEtools.py -> build/lib.linux-sparc-2.5/Bio/NMR copying Bio/NMR/xpktools.py -> build/lib.linux-sparc-2.5/Bio/NMR copying Bio/NMR/__init__.py -> build/lib.linux-sparc-2.5/Bio/NMR creating build/lib.linux-sparc-2.5/Bio/Parsers copying Bio/Parsers/__init__.py -> build/lib.linux-sparc-2.5/Bio/Parsers copying Bio/Parsers/spark.py -> build/lib.linux-sparc-2.5/Bio/Parsers creating build/lib.linux-sparc-2.5/Bio/Pathway copying Bio/Pathway/__init__.py -> build/lib.linux-sparc-2.5/Bio/Pathway creating build/lib.linux-sparc-2.5/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-sparc-2.5/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-sparc-2.5/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-sparc-2.5/Bio/Pathway/Rep copying Bio/Pathway/Rep/HashSet.py -> build/lib.linux-sparc-2.5/Bio/Pathway/Rep creating build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/PDBParser.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/Selection.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/Polypeptide.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/StructureBuilder.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/MMCIFParser.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/Dice.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/Residue.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/StructureAlignment.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/Chain.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/PDBExceptions.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/NeighborSearch.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/PDBList.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/NACCESS.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/__init__.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/FragmentMapper.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/PSEA.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/ResidueDepth.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/DSSP.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/Model.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/Entity.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/Atom.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/Vector.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/Superimposer.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/HSExposure.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/PDBIO.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-sparc-2.5/Bio/PDB copying Bio/PDB/Structure.py -> build/lib.linux-sparc-2.5/Bio/PDB creating build/lib.linux-sparc-2.5/Bio/PDB/mmCIF copying Bio/PDB/mmCIF/__init__.py -> build/lib.linux-sparc-2.5/Bio/PDB/mmCIF creating build/lib.linux-sparc-2.5/Bio/PopGen copying Bio/PopGen/__init__.py -> build/lib.linux-sparc-2.5/Bio/PopGen creating build/lib.linux-sparc-2.5/Bio/PopGen/Async copying Bio/PopGen/Async/Local.py -> build/lib.linux-sparc-2.5/Bio/PopGen/Async copying Bio/PopGen/Async/__init__.py -> build/lib.linux-sparc-2.5/Bio/PopGen/Async creating build/lib.linux-sparc-2.5/Bio/PopGen/FDist copying Bio/PopGen/FDist/Async.py -> build/lib.linux-sparc-2.5/Bio/PopGen/FDist copying Bio/PopGen/FDist/__init__.py -> build/lib.linux-sparc-2.5/Bio/PopGen/FDist copying Bio/PopGen/FDist/Controller.py -> build/lib.linux-sparc-2.5/Bio/PopGen/FDist copying Bio/PopGen/FDist/Utils.py -> build/lib.linux-sparc-2.5/Bio/PopGen/FDist creating build/lib.linux-sparc-2.5/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-sparc-2.5/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Utils.py -> build/lib.linux-sparc-2.5/Bio/PopGen/GenePop creating build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Async.py -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Template.py -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/__init__.py -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Controller.py -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Cache.py -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal creating build/lib.linux-sparc-2.5/Bio/Prosite copying Bio/Prosite/Prodoc.py -> build/lib.linux-sparc-2.5/Bio/Prosite copying Bio/Prosite/__init__.py -> build/lib.linux-sparc-2.5/Bio/Prosite copying Bio/Prosite/Pattern.py -> build/lib.linux-sparc-2.5/Bio/Prosite creating build/lib.linux-sparc-2.5/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-sparc-2.5/Bio/Restriction copying Bio/Restriction/Restriction.py -> build/lib.linux-sparc-2.5/Bio/Restriction copying Bio/Restriction/__init__.py -> build/lib.linux-sparc-2.5/Bio/Restriction copying Bio/Restriction/RanaConfig.py -> build/lib.linux-sparc-2.5/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> build/lib.linux-sparc-2.5/Bio/Restriction creating build/lib.linux-sparc-2.5/Bio/Restriction/_Update copying Bio/Restriction/_Update/__init__.py -> build/lib.linux-sparc-2.5/Bio/Restriction/_Update copying Bio/Restriction/_Update/RestrictionCompiler.py -> build/lib.linux-sparc-2.5/Bio/Restriction/_Update copying Bio/Restriction/_Update/Update.py -> build/lib.linux-sparc-2.5/Bio/Restriction/_Update creating build/lib.linux-sparc-2.5/Bio/Saf copying Bio/Saf/saf_format.py -> build/lib.linux-sparc-2.5/Bio/Saf copying Bio/Saf/__init__.py -> build/lib.linux-sparc-2.5/Bio/Saf copying Bio/Saf/Record.py -> build/lib.linux-sparc-2.5/Bio/Saf creating build/lib.linux-sparc-2.5/Bio/SCOP copying Bio/SCOP/Des.py -> build/lib.linux-sparc-2.5/Bio/SCOP copying Bio/SCOP/Dom.py -> build/lib.linux-sparc-2.5/Bio/SCOP copying Bio/SCOP/__init__.py -> build/lib.linux-sparc-2.5/Bio/SCOP copying Bio/SCOP/FileIndex.py -> build/lib.linux-sparc-2.5/Bio/SCOP copying Bio/SCOP/Cla.py -> build/lib.linux-sparc-2.5/Bio/SCOP copying Bio/SCOP/Hie.py -> build/lib.linux-sparc-2.5/Bio/SCOP copying Bio/SCOP/Raf.py -> build/lib.linux-sparc-2.5/Bio/SCOP copying Bio/SCOP/Residues.py -> build/lib.linux-sparc-2.5/Bio/SCOP creating build/lib.linux-sparc-2.5/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> build/lib.linux-sparc-2.5/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-sparc-2.5/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> build/lib.linux-sparc-2.5/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-sparc-2.5/Bio/SeqIO copying Bio/SeqIO/__init__.py -> build/lib.linux-sparc-2.5/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-sparc-2.5/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-sparc-2.5/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> build/lib.linux-sparc-2.5/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> build/lib.linux-sparc-2.5/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-sparc-2.5/Bio/SeqIO creating build/lib.linux-sparc-2.5/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-sparc-2.5/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-sparc-2.5/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-sparc-2.5/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-sparc-2.5/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> build/lib.linux-sparc-2.5/Bio/SeqUtils copying Bio/SeqUtils/CodonUsage.py -> build/lib.linux-sparc-2.5/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> build/lib.linux-sparc-2.5/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-sparc-2.5/Bio/SeqUtils copying Bio/SeqUtils/CodonUsageIndices.py -> build/lib.linux-sparc-2.5/Bio/SeqUtils creating build/lib.linux-sparc-2.5/Bio/Sequencing copying Bio/Sequencing/Phd.py -> build/lib.linux-sparc-2.5/Bio/Sequencing copying Bio/Sequencing/Ace.py -> build/lib.linux-sparc-2.5/Bio/Sequencing copying Bio/Sequencing/__init__.py -> build/lib.linux-sparc-2.5/Bio/Sequencing creating build/lib.linux-sparc-2.5/Bio/Statistics copying Bio/Statistics/__init__.py -> build/lib.linux-sparc-2.5/Bio/Statistics copying Bio/Statistics/lowess.py -> build/lib.linux-sparc-2.5/Bio/Statistics creating build/lib.linux-sparc-2.5/Bio/SubsMat copying Bio/SubsMat/FreqTable.py -> build/lib.linux-sparc-2.5/Bio/SubsMat copying Bio/SubsMat/__init__.py -> build/lib.linux-sparc-2.5/Bio/SubsMat copying Bio/SubsMat/MatrixInfo.py -> build/lib.linux-sparc-2.5/Bio/SubsMat creating build/lib.linux-sparc-2.5/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/SVDSuperimposer.py -> build/lib.linux-sparc-2.5/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-sparc-2.5/Bio/SVDSuperimposer creating build/lib.linux-sparc-2.5/Bio/SwissProt copying Bio/SwissProt/SProt.py -> build/lib.linux-sparc-2.5/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> build/lib.linux-sparc-2.5/Bio/SwissProt copying Bio/SwissProt/__init__.py -> build/lib.linux-sparc-2.5/Bio/SwissProt creating build/lib.linux-sparc-2.5/Bio/UniGene copying Bio/UniGene/__init__.py -> build/lib.linux-sparc-2.5/Bio/UniGene creating build/lib.linux-sparc-2.5/Bio/writers copying Bio/writers/__init__.py -> build/lib.linux-sparc-2.5/Bio/writers creating build/lib.linux-sparc-2.5/Bio/writers/SeqRecord copying Bio/writers/SeqRecord/fasta.py -> build/lib.linux-sparc-2.5/Bio/writers/SeqRecord copying Bio/writers/SeqRecord/__init__.py -> build/lib.linux-sparc-2.5/Bio/writers/SeqRecord copying Bio/writers/SeqRecord/embl.py -> build/lib.linux-sparc-2.5/Bio/writers/SeqRecord copying Bio/writers/SeqRecord/empty.py -> build/lib.linux-sparc-2.5/Bio/writers/SeqRecord creating build/lib.linux-sparc-2.5/Bio/Wise copying Bio/Wise/dnal.py -> build/lib.linux-sparc-2.5/Bio/Wise copying Bio/Wise/__init__.py -> build/lib.linux-sparc-2.5/Bio/Wise copying Bio/Wise/psw.py -> build/lib.linux-sparc-2.5/Bio/Wise creating build/lib.linux-sparc-2.5/Bio/WWW copying Bio/WWW/__init__.py -> build/lib.linux-sparc-2.5/Bio/WWW creating build/lib.linux-sparc-2.5/BioSQL copying BioSQL/__init__.py -> build/lib.linux-sparc-2.5/BioSQL copying BioSQL/DBUtils.py -> build/lib.linux-sparc-2.5/BioSQL copying BioSQL/Loader.py -> build/lib.linux-sparc-2.5/BioSQL copying BioSQL/BioSeq.py -> build/lib.linux-sparc-2.5/BioSQL copying BioSQL/BioSeqDatabase.py -> build/lib.linux-sparc-2.5/BioSQL creating build/lib.linux-sparc-2.5/Martel copying Martel/LAX.py -> build/lib.linux-sparc-2.5/Martel copying Martel/IterParser.py -> build/lib.linux-sparc-2.5/Martel copying Martel/convert_re.py -> build/lib.linux-sparc-2.5/Martel copying Martel/msre_parse.py -> build/lib.linux-sparc-2.5/Martel copying Martel/optimize.py -> build/lib.linux-sparc-2.5/Martel copying Martel/Dispatch.py -> build/lib.linux-sparc-2.5/Martel copying Martel/RecordReader.py -> build/lib.linux-sparc-2.5/Martel copying Martel/msre_constants.py -> build/lib.linux-sparc-2.5/Martel copying Martel/__init__.py -> build/lib.linux-sparc-2.5/Martel copying Martel/Parser.py -> build/lib.linux-sparc-2.5/Martel copying Martel/Generate.py -> build/lib.linux-sparc-2.5/Martel copying Martel/setup.py -> build/lib.linux-sparc-2.5/Martel copying Martel/Expression.py -> build/lib.linux-sparc-2.5/Martel copying Martel/Time.py -> build/lib.linux-sparc-2.5/Martel copying Martel/Iterator.py -> build/lib.linux-sparc-2.5/Martel creating build/lib.linux-sparc-2.5/Bio/Affy copying Bio/Affy/__init__.py -> build/lib.linux-sparc-2.5/Bio/Affy copying Bio/Affy/CelFile.py -> build/lib.linux-sparc-2.5/Bio/Affy creating build/lib.linux-sparc-2.5/Bio/Cluster copying Bio/Cluster/__init__.py -> build/lib.linux-sparc-2.5/Bio/Cluster creating build/lib.linux-sparc-2.5/Bio/KDTree copying Bio/KDTree/__init__.py -> build/lib.linux-sparc-2.5/Bio/KDTree copying Bio/KDTree/KDTree.py -> build/lib.linux-sparc-2.5/Bio/KDTree creating build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_020511.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.linux-sparc-2.5/Bio/Entrez/DTDs copying Bio/EUtils/DTDs/LinkOut.dtd -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eSearch_020511.dtd -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/ePost_020511.dtd -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eSummary_020511.dtd -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eInfo_020511.dtd -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eLink_020511.dtd -> build/lib.linux-sparc-2.5/Bio/EUtils/DTDs creating build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/island.par -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/ssm_1d.par -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_ssm_1d.par -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/simple.par -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/ssm_2d.par -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/decline_lambda.par -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_island.par -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/bottle.par -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_ssm_2d.par -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/decline_split.par -> build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data running build_ext building 'Bio.clistfns' extension creating build/temp.linux-sparc-2.5 creating build/temp.linux-sparc-2.5/Bio gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/include/python2.5 -c Bio/clistfnsmodule.c -o build/temp.linux-sparc-2.5/Bio/clistfnsmodule.o gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.5/Bio/clistfnsmodule.o -o build/lib.linux-sparc-2.5/Bio/clistfns.so building 'Bio.cmathfns' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.5 -c Bio/cmathfnsmodule.c -o build/temp.linux-sparc-2.5/Bio/cmathfnsmodule.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.5 -c Bio/csupport.c -o build/temp.linux-sparc-2.5/Bio/csupport.o gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.5/Bio/cmathfnsmodule.o build/temp.linux-sparc-2.5/Bio/csupport.o -o build/lib.linux-sparc-2.5/Bio/cmathfns.so building 'Bio.cstringfns' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/include/python2.5 -c Bio/cstringfnsmodule.c -o build/temp.linux-sparc-2.5/Bio/cstringfnsmodule.o Bio/cstringfnsmodule.c: In function 'cstringfns_splitany': Bio/cstringfnsmodule.c:34: warning: pointer targets in initialization differ in signedness Bio/cstringfnsmodule.c:71: warning: pointer targets in passing argument 1 of 'PyString_FromStringAndSize' differ in signedness Bio/cstringfnsmodule.c:85: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/cstringfnsmodule.c:87: warning: pointer targets in passing argument 1 of 'PyString_FromStringAndSize' differ in signedness gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.5/Bio/cstringfnsmodule.o -o build/lib.linux-sparc-2.5/Bio/cstringfns.so building 'Bio.cpairwise2' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.5 -c Bio/cpairwise2module.c -o build/temp.linux-sparc-2.5/Bio/cpairwise2module.o gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.5/Bio/cpairwise2module.o build/temp.linux-sparc-2.5/Bio/csupport.o -o build/lib.linux-sparc-2.5/Bio/cpairwise2.so building 'Bio.trie' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.5 -c Bio/triemodule.c -o build/temp.linux-sparc-2.5/Bio/triemodule.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.5 -c Bio/trie.c -o build/temp.linux-sparc-2.5/Bio/trie.o Bio/trie.c: In function 'Trie_set': Bio/trie.c:103: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:103: warning: pointer targets in passing argument 1 of '__strdup' differ in signedness Bio/trie.c:156: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:162: warning: pointer targets in passing argument 1 of 'strncpy' differ in signedness Bio/trie.c:162: warning: pointer targets in passing argument 2 of 'strncpy' differ in signedness Bio/trie.c:164: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:164: warning: pointer targets in passing argument 1 of '__strdup' differ in signedness Bio/trie.c: In function 'Trie_get': Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strncmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 2 of 'strncmp' differ in signedness Bio/trie.c:235: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c: In function '_get_approximate_transition': Bio/trie.c:268: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:272: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:272: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:284: warning: pointer targets in passing argument 1 of 'strncat' differ in signedness Bio/trie.c:284: warning: pointer targets in passing argument 2 of 'strncat' differ in signedness Bio/trie.c: In function '_get_approximate_trie': Bio/trie.c:353: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:355: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:356: warning: pointer targets in passing argument 1 of 'strcat' differ in signedness Bio/trie.c:356: warning: pointer targets in passing argument 2 of 'strcat' differ in signedness Bio/trie.c:367: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:369: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c: In function 'Trie_has_prefix': Bio/trie.c:440: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:441: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strncmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 2 of 'strncmp' differ in signedness Bio/trie.c: In function '_iterate_helper': Bio/trie.c:468: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:470: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:475: warning: pointer targets in passing argument 1 of 'strcat' differ in signedness Bio/trie.c:475: warning: pointer targets in passing argument 2 of 'strcat' differ in signedness Bio/trie.c: In function '_with_prefix_helper': Bio/trie.c:521: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:522: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strncmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 2 of 'strncmp' differ in signedness Bio/trie.c:530: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:536: warning: pointer targets in passing argument 1 of 'strncat' differ in signedness Bio/trie.c:536: warning: pointer targets in passing argument 2 of 'strncat' differ in signedness Bio/trie.c: In function '_serialize_transition': Bio/trie.c:621: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c: In function '_deserialize_transition': Bio/trie.c:708: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:708: warning: pointer targets in passing argument 1 of '__strdup' differ in signedness Bio/trie.c: In function 'test': Bio/trie.c:752: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:753: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:754: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:755: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:757: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:758: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:759: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:760: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:762: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:763: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:765: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:768: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:769: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.5/Bio/triemodule.o build/temp.linux-sparc-2.5/Bio/trie.o -o build/lib.linux-sparc-2.5/Bio/trie.so building 'Bio.cMarkovModel' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.5 -c Bio/cMarkovModelmodule.c -o build/temp.linux-sparc-2.5/Bio/cMarkovModelmodule.o gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.5/Bio/cMarkovModelmodule.o build/temp.linux-sparc-2.5/Bio/csupport.o -o build/lib.linux-sparc-2.5/Bio/cMarkovModel.so building 'Bio.PDB.mmCIF.MMCIFlex' extension creating build/temp.linux-sparc-2.5/Bio/PDB creating build/temp.linux-sparc-2.5/Bio/PDB/mmCIF gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.5 -c Bio/PDB/mmCIF/lex.yy.c -o build/temp.linux-sparc-2.5/Bio/PDB/mmCIF/lex.yy.o lex.yy.c: In function 'yylex': mmcif.lex:43: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result mmcif.lex: At top level: mmcif.lex:52: warning: function declaration isn't a prototype lex.yy.c:1046: warning: 'yyunput' defined but not used lex.yy.c:1088: warning: 'input' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.5 -c Bio/PDB/mmCIF/MMCIFlexmodule.c -o build/temp.linux-sparc-2.5/Bio/PDB/mmCIF/MMCIFlexmodule.o Bio/PDB/mmCIF/MMCIFlexmodule.c: In function 'MMCIFlex_open_file': Bio/PDB/mmCIF/MMCIFlexmodule.c:16: warning: implicit declaration of function 'mmcif_set_file' Bio/PDB/mmCIF/MMCIFlexmodule.c: In function 'MMCIFlex_get_token': Bio/PDB/mmCIF/MMCIFlexmodule.c:44: warning: implicit declaration of function 'mmcif_get_token' Bio/PDB/mmCIF/MMCIFlexmodule.c: At top level: Bio/PDB/mmCIF/MMCIFlexmodule.c:67: warning: function declaration isn't a prototype gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.5/Bio/PDB/mmCIF/lex.yy.o build/temp.linux-sparc-2.5/Bio/PDB/mmCIF/MMCIFlexmodule.o -lfl -o build/lib.linux-sparc-2.5/Bio/PDB/mmCIF/MMCIFlex.so building 'Bio.Nexus.cnexus' extension creating build/temp.linux-sparc-2.5/Bio/Nexus gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/include/python2.5 -c Bio/Nexus/cnexus.c -o build/temp.linux-sparc-2.5/Bio/Nexus/cnexus.o gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.5/Bio/Nexus/cnexus.o -o build/lib.linux-sparc-2.5/Bio/Nexus/cnexus.so building 'Bio.Restriction.DNAUtils' extension creating build/temp.linux-sparc-2.5/Bio/Restriction gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/include/python2.5 -c Bio/Restriction/DNAUtils.c -o build/temp.linux-sparc-2.5/Bio/Restriction/DNAUtils.o gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.5/Bio/Restriction/DNAUtils.o -o build/lib.linux-sparc-2.5/Bio/Restriction/DNAUtils.so building 'Bio.Cluster.cluster' extension creating build/temp.linux-sparc-2.5/Bio/Cluster gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c Bio/Cluster/clustermodule.c -o build/temp.linux-sparc-2.5/Bio/Cluster/clustermodule.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c Bio/Cluster/cluster.c -o build/temp.linux-sparc-2.5/Bio/Cluster/cluster.o gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.5/Bio/Cluster/clustermodule.o build/temp.linux-sparc-2.5/Bio/Cluster/cluster.o -o build/lib.linux-sparc-2.5/Bio/Cluster/cluster.so building 'Bio.KDTree._CKDTree' extension creating build/temp.linux-sparc-2.5/Bio/KDTree gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c Bio/KDTree/KDTree.c -o build/temp.linux-sparc-2.5/Bio/KDTree/KDTree.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/lib/python2.5/site-packages/numpy/core/include -I/usr/include/python2.5 -c Bio/KDTree/KDTreemodule.c -o build/temp.linux-sparc-2.5/Bio/KDTree/KDTreemodule.o gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.5/Bio/KDTree/KDTree.o build/temp.linux-sparc-2.5/Bio/KDTree/KDTreemodule.o -o build/lib.linux-sparc-2.5/Bio/KDTree/_CKDTree.so echo sparc sparc yes | python2.4 setup.py build running build running build_py creating build/lib.linux-sparc-2.4 creating build/lib.linux-sparc-2.4/Bio copying Bio/Transcribe.py -> build/lib.linux-sparc-2.4/Bio copying Bio/pairwise2.py -> build/lib.linux-sparc-2.4/Bio copying Bio/MarkovModel.py -> build/lib.linux-sparc-2.4/Bio copying Bio/Search.py -> build/lib.linux-sparc-2.4/Bio copying Bio/EZRetrieve.py -> build/lib.linux-sparc-2.4/Bio copying Bio/DocSQL.py -> build/lib.linux-sparc-2.4/Bio copying Bio/mathfns.py -> build/lib.linux-sparc-2.4/Bio copying Bio/utils.py -> build/lib.linux-sparc-2.4/Bio copying Bio/StdHandler.py -> build/lib.linux-sparc-2.4/Bio copying Bio/SeqFeature.py -> build/lib.linux-sparc-2.4/Bio copying Bio/Translate.py -> build/lib.linux-sparc-2.4/Bio copying Bio/HotRand.py -> build/lib.linux-sparc-2.4/Bio copying Bio/MaxEntropy.py -> build/lib.linux-sparc-2.4/Bio copying Bio/File.py -> build/lib.linux-sparc-2.4/Bio copying Bio/Seq.py -> build/lib.linux-sparc-2.4/Bio copying Bio/Std.py -> build/lib.linux-sparc-2.4/Bio copying Bio/DBXRef.py -> build/lib.linux-sparc-2.4/Bio copying Bio/distance.py -> build/lib.linux-sparc-2.4/Bio copying Bio/FilteredReader.py -> build/lib.linux-sparc-2.4/Bio copying Bio/stringfns.py -> build/lib.linux-sparc-2.4/Bio copying Bio/__init__.py -> build/lib.linux-sparc-2.4/Bio copying Bio/ParserSupport.py -> build/lib.linux-sparc-2.4/Bio copying Bio/Index.py -> build/lib.linux-sparc-2.4/Bio copying Bio/NetCatch.py -> build/lib.linux-sparc-2.4/Bio copying Bio/SeqRecord.py -> build/lib.linux-sparc-2.4/Bio copying Bio/PubMed.py -> build/lib.linux-sparc-2.4/Bio copying Bio/NaiveBayes.py -> build/lib.linux-sparc-2.4/Bio copying Bio/ExPASy.py -> build/lib.linux-sparc-2.4/Bio copying Bio/listfns.py -> build/lib.linux-sparc-2.4/Bio copying Bio/Writer.py -> build/lib.linux-sparc-2.4/Bio copying Bio/triefind.py -> build/lib.linux-sparc-2.4/Bio copying Bio/Decode.py -> build/lib.linux-sparc-2.4/Bio copying Bio/LogisticRegression.py -> build/lib.linux-sparc-2.4/Bio copying Bio/kNN.py -> build/lib.linux-sparc-2.4/Bio copying Bio/PropertyManager.py -> build/lib.linux-sparc-2.4/Bio creating build/lib.linux-sparc-2.4/Bio/Align copying Bio/Align/AlignInfo.py -> build/lib.linux-sparc-2.4/Bio/Align copying Bio/Align/FormatConvert.py -> build/lib.linux-sparc-2.4/Bio/Align copying Bio/Align/__init__.py -> build/lib.linux-sparc-2.4/Bio/Align copying Bio/Align/Generic.py -> build/lib.linux-sparc-2.4/Bio/Align creating build/lib.linux-sparc-2.4/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-sparc-2.4/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-sparc-2.4/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-sparc-2.4/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-sparc-2.4/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-sparc-2.4/Bio/AlignIO copying Bio/AlignIO/__init__.py -> build/lib.linux-sparc-2.4/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-sparc-2.4/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-sparc-2.4/Bio/AlignIO creating build/lib.linux-sparc-2.4/Bio/AlignAce copying Bio/AlignAce/Motif.py -> build/lib.linux-sparc-2.4/Bio/AlignAce copying Bio/AlignAce/__init__.py -> build/lib.linux-sparc-2.4/Bio/AlignAce copying Bio/AlignAce/Parser.py -> build/lib.linux-sparc-2.4/Bio/AlignAce copying Bio/AlignAce/CompareAceStandalone.py -> build/lib.linux-sparc-2.4/Bio/AlignAce copying Bio/AlignAce/AlignAceStandalone.py -> build/lib.linux-sparc-2.4/Bio/AlignAce copying Bio/AlignAce/Applications.py -> build/lib.linux-sparc-2.4/Bio/AlignAce copying Bio/AlignAce/Scanner.py -> build/lib.linux-sparc-2.4/Bio/AlignAce creating build/lib.linux-sparc-2.4/Bio/Alphabet copying Bio/Alphabet/__init__.py -> build/lib.linux-sparc-2.4/Bio/Alphabet copying Bio/Alphabet/IUPAC.py -> build/lib.linux-sparc-2.4/Bio/Alphabet copying Bio/Alphabet/Reduced.py -> build/lib.linux-sparc-2.4/Bio/Alphabet creating build/lib.linux-sparc-2.4/Bio/Application copying Bio/Application/__init__.py -> build/lib.linux-sparc-2.4/Bio/Application creating build/lib.linux-sparc-2.4/Bio/Blast copying Bio/Blast/NCBIStandalone.py -> build/lib.linux-sparc-2.4/Bio/Blast copying Bio/Blast/__init__.py -> build/lib.linux-sparc-2.4/Bio/Blast copying Bio/Blast/NCBIWWW.py -> build/lib.linux-sparc-2.4/Bio/Blast copying Bio/Blast/NCBIXML.py -> build/lib.linux-sparc-2.4/Bio/Blast copying Bio/Blast/Applications.py -> build/lib.linux-sparc-2.4/Bio/Blast copying Bio/Blast/ParseBlastTable.py -> build/lib.linux-sparc-2.4/Bio/Blast copying Bio/Blast/Record.py -> build/lib.linux-sparc-2.4/Bio/Blast creating build/lib.linux-sparc-2.4/Bio/CAPS copying Bio/CAPS/__init__.py -> build/lib.linux-sparc-2.4/Bio/CAPS creating build/lib.linux-sparc-2.4/Bio/Compass copying Bio/Compass/__init__.py -> build/lib.linux-sparc-2.4/Bio/Compass creating build/lib.linux-sparc-2.4/Bio/Clustalw copying Bio/Clustalw/__init__.py -> build/lib.linux-sparc-2.4/Bio/Clustalw creating build/lib.linux-sparc-2.4/Bio/Crystal copying Bio/Crystal/__init__.py -> build/lib.linux-sparc-2.4/Bio/Crystal creating build/lib.linux-sparc-2.4/Bio/Data copying Bio/Data/IUPACData.py -> build/lib.linux-sparc-2.4/Bio/Data copying Bio/Data/CodonTable.py -> build/lib.linux-sparc-2.4/Bio/Data copying Bio/Data/__init__.py -> build/lib.linux-sparc-2.4/Bio/Data creating build/lib.linux-sparc-2.4/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-sparc-2.4/Bio/Emboss copying Bio/Emboss/Primer.py -> build/lib.linux-sparc-2.4/Bio/Emboss copying Bio/Emboss/__init__.py -> build/lib.linux-sparc-2.4/Bio/Emboss copying Bio/Emboss/primer3_format.py -> build/lib.linux-sparc-2.4/Bio/Emboss copying Bio/Emboss/Primer3.py -> build/lib.linux-sparc-2.4/Bio/Emboss copying Bio/Emboss/Applications.py -> build/lib.linux-sparc-2.4/Bio/Emboss copying Bio/Emboss/primersearch_format.py -> build/lib.linux-sparc-2.4/Bio/Emboss creating build/lib.linux-sparc-2.4/Bio/Encodings copying Bio/Encodings/IUPACEncoding.py -> build/lib.linux-sparc-2.4/Bio/Encodings copying Bio/Encodings/__init__.py -> build/lib.linux-sparc-2.4/Bio/Encodings creating build/lib.linux-sparc-2.4/Bio/Entrez copying Bio/Entrez/__init__.py -> build/lib.linux-sparc-2.4/Bio/Entrez copying Bio/Entrez/Parser.py -> build/lib.linux-sparc-2.4/Bio/Entrez copying Bio/Entrez/SerialSet.py -> build/lib.linux-sparc-2.4/Bio/Entrez creating build/lib.linux-sparc-2.4/Bio/Enzyme copying Bio/Enzyme/__init__.py -> build/lib.linux-sparc-2.4/Bio/Enzyme creating build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/ThinClient.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/ReseekFile.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/Datatypes.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/POM.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/parse.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/Mixins.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/__init__.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/HistoryClient.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/DBIdsClient.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/setup.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/Config.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/dtd2py.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/sourcegen.py -> build/lib.linux-sparc-2.4/Bio/EUtils copying Bio/EUtils/MultiDict.py -> build/lib.linux-sparc-2.4/Bio/EUtils creating build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eSearch_020511.py -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eSummary_020511.py -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eLink_020511.py -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/__init__.py -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eInfo_020511.py -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/ePost_020511.py -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/LinkOut.py -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs creating build/lib.linux-sparc-2.4/Bio/Fasta copying Bio/Fasta/FastaAlign.py -> build/lib.linux-sparc-2.4/Bio/Fasta copying Bio/Fasta/__init__.py -> build/lib.linux-sparc-2.4/Bio/Fasta creating build/lib.linux-sparc-2.4/Bio/FSSP copying Bio/FSSP/fssp_rec.py -> build/lib.linux-sparc-2.4/Bio/FSSP copying Bio/FSSP/FSSPTools.py -> build/lib.linux-sparc-2.4/Bio/FSSP copying Bio/FSSP/__init__.py -> build/lib.linux-sparc-2.4/Bio/FSSP creating build/lib.linux-sparc-2.4/Bio/GA copying Bio/GA/Evolver.py -> build/lib.linux-sparc-2.4/Bio/GA copying Bio/GA/__init__.py -> build/lib.linux-sparc-2.4/Bio/GA copying Bio/GA/Organism.py -> build/lib.linux-sparc-2.4/Bio/GA creating build/lib.linux-sparc-2.4/Bio/GA/Crossover copying Bio/GA/Crossover/GeneralPoint.py -> build/lib.linux-sparc-2.4/Bio/GA/Crossover copying Bio/GA/Crossover/Point.py -> build/lib.linux-sparc-2.4/Bio/GA/Crossover copying Bio/GA/Crossover/__init__.py -> build/lib.linux-sparc-2.4/Bio/GA/Crossover copying Bio/GA/Crossover/TwoPoint.py -> build/lib.linux-sparc-2.4/Bio/GA/Crossover copying Bio/GA/Crossover/General.py -> build/lib.linux-sparc-2.4/Bio/GA/Crossover copying Bio/GA/Crossover/Uniform.py -> build/lib.linux-sparc-2.4/Bio/GA/Crossover creating build/lib.linux-sparc-2.4/Bio/GA/Mutation copying Bio/GA/Mutation/Simple.py -> build/lib.linux-sparc-2.4/Bio/GA/Mutation copying Bio/GA/Mutation/__init__.py -> build/lib.linux-sparc-2.4/Bio/GA/Mutation copying Bio/GA/Mutation/General.py -> build/lib.linux-sparc-2.4/Bio/GA/Mutation creating build/lib.linux-sparc-2.4/Bio/GA/Repair copying Bio/GA/Repair/__init__.py -> build/lib.linux-sparc-2.4/Bio/GA/Repair copying Bio/GA/Repair/Stabilizing.py -> build/lib.linux-sparc-2.4/Bio/GA/Repair creating build/lib.linux-sparc-2.4/Bio/GA/Selection copying Bio/GA/Selection/Diversity.py -> build/lib.linux-sparc-2.4/Bio/GA/Selection copying Bio/GA/Selection/RouletteWheel.py -> build/lib.linux-sparc-2.4/Bio/GA/Selection copying Bio/GA/Selection/Abstract.py -> build/lib.linux-sparc-2.4/Bio/GA/Selection copying Bio/GA/Selection/__init__.py -> build/lib.linux-sparc-2.4/Bio/GA/Selection copying Bio/GA/Selection/Tournament.py -> build/lib.linux-sparc-2.4/Bio/GA/Selection creating build/lib.linux-sparc-2.4/Bio/GenBank copying Bio/GenBank/utils.py -> build/lib.linux-sparc-2.4/Bio/GenBank copying Bio/GenBank/LocationParser.py -> build/lib.linux-sparc-2.4/Bio/GenBank copying Bio/GenBank/__init__.py -> build/lib.linux-sparc-2.4/Bio/GenBank copying Bio/GenBank/Scanner.py -> build/lib.linux-sparc-2.4/Bio/GenBank copying Bio/GenBank/Record.py -> build/lib.linux-sparc-2.4/Bio/GenBank creating build/lib.linux-sparc-2.4/Bio/Geo copying Bio/Geo/__init__.py -> build/lib.linux-sparc-2.4/Bio/Geo copying Bio/Geo/Record.py -> build/lib.linux-sparc-2.4/Bio/Geo creating build/lib.linux-sparc-2.4/Bio/GFF copying Bio/GFF/easy.py -> build/lib.linux-sparc-2.4/Bio/GFF copying Bio/GFF/GenericTools.py -> build/lib.linux-sparc-2.4/Bio/GFF copying Bio/GFF/__init__.py -> build/lib.linux-sparc-2.4/Bio/GFF copying Bio/GFF/binning.py -> build/lib.linux-sparc-2.4/Bio/GFF creating build/lib.linux-sparc-2.4/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-sparc-2.4/Bio/Graphics copying Bio/Graphics/__init__.py -> build/lib.linux-sparc-2.4/Bio/Graphics copying Bio/Graphics/Distribution.py -> build/lib.linux-sparc-2.4/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-sparc-2.4/Bio/Graphics copying Bio/Graphics/Comparative.py -> build/lib.linux-sparc-2.4/Bio/Graphics creating build/lib.linux-sparc-2.4/Bio/HMM copying Bio/HMM/MarkovModel.py -> build/lib.linux-sparc-2.4/Bio/HMM copying Bio/HMM/Utilities.py -> build/lib.linux-sparc-2.4/Bio/HMM copying Bio/HMM/__init__.py -> build/lib.linux-sparc-2.4/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-sparc-2.4/Bio/HMM copying Bio/HMM/Trainer.py -> build/lib.linux-sparc-2.4/Bio/HMM creating build/lib.linux-sparc-2.4/Bio/IntelliGenetics copying Bio/IntelliGenetics/__init__.py -> build/lib.linux-sparc-2.4/Bio/IntelliGenetics copying Bio/IntelliGenetics/Record.py -> build/lib.linux-sparc-2.4/Bio/IntelliGenetics copying Bio/IntelliGenetics/intelligenetics_format.py -> build/lib.linux-sparc-2.4/Bio/IntelliGenetics creating build/lib.linux-sparc-2.4/Bio/InterPro copying Bio/InterPro/__init__.py -> build/lib.linux-sparc-2.4/Bio/InterPro creating build/lib.linux-sparc-2.4/Bio/KEGG copying Bio/KEGG/__init__.py -> build/lib.linux-sparc-2.4/Bio/KEGG creating build/lib.linux-sparc-2.4/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-sparc-2.4/Bio/KEGG/Compound creating build/lib.linux-sparc-2.4/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-sparc-2.4/Bio/KEGG/Enzyme creating build/lib.linux-sparc-2.4/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> build/lib.linux-sparc-2.4/Bio/KEGG/Map creating build/lib.linux-sparc-2.4/Bio/Medline copying Bio/Medline/__init__.py -> build/lib.linux-sparc-2.4/Bio/Medline creating build/lib.linux-sparc-2.4/Bio/MEME copying Bio/MEME/Motif.py -> build/lib.linux-sparc-2.4/Bio/MEME copying Bio/MEME/__init__.py -> build/lib.linux-sparc-2.4/Bio/MEME copying Bio/MEME/Parser.py -> build/lib.linux-sparc-2.4/Bio/MEME creating build/lib.linux-sparc-2.4/Bio/MetaTool copying Bio/MetaTool/Input.py -> build/lib.linux-sparc-2.4/Bio/MetaTool copying Bio/MetaTool/__init__.py -> build/lib.linux-sparc-2.4/Bio/MetaTool copying Bio/MetaTool/metatool_format.py -> build/lib.linux-sparc-2.4/Bio/MetaTool copying Bio/MetaTool/Record.py -> build/lib.linux-sparc-2.4/Bio/MetaTool creating build/lib.linux-sparc-2.4/Bio/Mindy copying Bio/Mindy/compression.py -> build/lib.linux-sparc-2.4/Bio/Mindy copying Bio/Mindy/Location.py -> build/lib.linux-sparc-2.4/Bio/Mindy copying Bio/Mindy/BaseDB.py -> build/lib.linux-sparc-2.4/Bio/Mindy copying Bio/Mindy/SimpleSeqRecord.py -> build/lib.linux-sparc-2.4/Bio/Mindy copying Bio/Mindy/__init__.py -> build/lib.linux-sparc-2.4/Bio/Mindy copying Bio/Mindy/FlatDB.py -> build/lib.linux-sparc-2.4/Bio/Mindy copying Bio/Mindy/BerkeleyDB.py -> build/lib.linux-sparc-2.4/Bio/Mindy copying Bio/Mindy/XPath.py -> build/lib.linux-sparc-2.4/Bio/Mindy creating build/lib.linux-sparc-2.4/Bio/NBRF copying Bio/NBRF/nbrf_format.py -> build/lib.linux-sparc-2.4/Bio/NBRF copying Bio/NBRF/ValSeq.py -> build/lib.linux-sparc-2.4/Bio/NBRF copying Bio/NBRF/__init__.py -> build/lib.linux-sparc-2.4/Bio/NBRF copying Bio/NBRF/Record.py -> build/lib.linux-sparc-2.4/Bio/NBRF creating build/lib.linux-sparc-2.4/Bio/Ndb copying Bio/Ndb/__init__.py -> build/lib.linux-sparc-2.4/Bio/Ndb creating build/lib.linux-sparc-2.4/Bio/NeuralNetwork copying Bio/NeuralNetwork/__init__.py -> build/lib.linux-sparc-2.4/Bio/NeuralNetwork copying Bio/NeuralNetwork/Training.py -> build/lib.linux-sparc-2.4/Bio/NeuralNetwork copying Bio/NeuralNetwork/StopTraining.py -> build/lib.linux-sparc-2.4/Bio/NeuralNetwork creating build/lib.linux-sparc-2.4/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/__init__.py -> build/lib.linux-sparc-2.4/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/Layer.py -> build/lib.linux-sparc-2.4/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/Network.py -> build/lib.linux-sparc-2.4/Bio/NeuralNetwork/BackPropagation creating build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Motif.py -> build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Schema.py -> build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/__init__.py -> build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Pattern.py -> build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Signature.py -> build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Gene creating build/lib.linux-sparc-2.4/Bio/Nexus copying Bio/Nexus/Nexus.py -> build/lib.linux-sparc-2.4/Bio/Nexus copying Bio/Nexus/__init__.py -> build/lib.linux-sparc-2.4/Bio/Nexus copying Bio/Nexus/Trees.py -> build/lib.linux-sparc-2.4/Bio/Nexus copying Bio/Nexus/Nodes.py -> build/lib.linux-sparc-2.4/Bio/Nexus creating build/lib.linux-sparc-2.4/Bio/NMR copying Bio/NMR/NOEtools.py -> build/lib.linux-sparc-2.4/Bio/NMR copying Bio/NMR/xpktools.py -> build/lib.linux-sparc-2.4/Bio/NMR copying Bio/NMR/__init__.py -> build/lib.linux-sparc-2.4/Bio/NMR creating build/lib.linux-sparc-2.4/Bio/Parsers copying Bio/Parsers/__init__.py -> build/lib.linux-sparc-2.4/Bio/Parsers copying Bio/Parsers/spark.py -> build/lib.linux-sparc-2.4/Bio/Parsers creating build/lib.linux-sparc-2.4/Bio/Pathway copying Bio/Pathway/__init__.py -> build/lib.linux-sparc-2.4/Bio/Pathway creating build/lib.linux-sparc-2.4/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-sparc-2.4/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-sparc-2.4/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-sparc-2.4/Bio/Pathway/Rep copying Bio/Pathway/Rep/HashSet.py -> build/lib.linux-sparc-2.4/Bio/Pathway/Rep creating build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/PDBParser.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/Selection.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/Polypeptide.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/StructureBuilder.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/MMCIFParser.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/Dice.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/Residue.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/StructureAlignment.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/Chain.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/PDBExceptions.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/NeighborSearch.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/PDBList.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/NACCESS.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/__init__.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/FragmentMapper.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/PSEA.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/ResidueDepth.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/DSSP.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/Model.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/Entity.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/Atom.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/Vector.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/Superimposer.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/HSExposure.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/PDBIO.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-sparc-2.4/Bio/PDB copying Bio/PDB/Structure.py -> build/lib.linux-sparc-2.4/Bio/PDB creating build/lib.linux-sparc-2.4/Bio/PDB/mmCIF copying Bio/PDB/mmCIF/__init__.py -> build/lib.linux-sparc-2.4/Bio/PDB/mmCIF creating build/lib.linux-sparc-2.4/Bio/PopGen copying Bio/PopGen/__init__.py -> build/lib.linux-sparc-2.4/Bio/PopGen creating build/lib.linux-sparc-2.4/Bio/PopGen/Async copying Bio/PopGen/Async/Local.py -> build/lib.linux-sparc-2.4/Bio/PopGen/Async copying Bio/PopGen/Async/__init__.py -> build/lib.linux-sparc-2.4/Bio/PopGen/Async creating build/lib.linux-sparc-2.4/Bio/PopGen/FDist copying Bio/PopGen/FDist/Async.py -> build/lib.linux-sparc-2.4/Bio/PopGen/FDist copying Bio/PopGen/FDist/__init__.py -> build/lib.linux-sparc-2.4/Bio/PopGen/FDist copying Bio/PopGen/FDist/Controller.py -> build/lib.linux-sparc-2.4/Bio/PopGen/FDist copying Bio/PopGen/FDist/Utils.py -> build/lib.linux-sparc-2.4/Bio/PopGen/FDist creating build/lib.linux-sparc-2.4/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-sparc-2.4/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Utils.py -> build/lib.linux-sparc-2.4/Bio/PopGen/GenePop creating build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Async.py -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Template.py -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/__init__.py -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Controller.py -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Cache.py -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal creating build/lib.linux-sparc-2.4/Bio/Prosite copying Bio/Prosite/Prodoc.py -> build/lib.linux-sparc-2.4/Bio/Prosite copying Bio/Prosite/__init__.py -> build/lib.linux-sparc-2.4/Bio/Prosite copying Bio/Prosite/Pattern.py -> build/lib.linux-sparc-2.4/Bio/Prosite creating build/lib.linux-sparc-2.4/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-sparc-2.4/Bio/Restriction copying Bio/Restriction/Restriction.py -> build/lib.linux-sparc-2.4/Bio/Restriction copying Bio/Restriction/__init__.py -> build/lib.linux-sparc-2.4/Bio/Restriction copying Bio/Restriction/RanaConfig.py -> build/lib.linux-sparc-2.4/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> build/lib.linux-sparc-2.4/Bio/Restriction creating build/lib.linux-sparc-2.4/Bio/Restriction/_Update copying Bio/Restriction/_Update/__init__.py -> build/lib.linux-sparc-2.4/Bio/Restriction/_Update copying Bio/Restriction/_Update/RestrictionCompiler.py -> build/lib.linux-sparc-2.4/Bio/Restriction/_Update copying Bio/Restriction/_Update/Update.py -> build/lib.linux-sparc-2.4/Bio/Restriction/_Update creating build/lib.linux-sparc-2.4/Bio/Saf copying Bio/Saf/saf_format.py -> build/lib.linux-sparc-2.4/Bio/Saf copying Bio/Saf/__init__.py -> build/lib.linux-sparc-2.4/Bio/Saf copying Bio/Saf/Record.py -> build/lib.linux-sparc-2.4/Bio/Saf creating build/lib.linux-sparc-2.4/Bio/SCOP copying Bio/SCOP/Des.py -> build/lib.linux-sparc-2.4/Bio/SCOP copying Bio/SCOP/Dom.py -> build/lib.linux-sparc-2.4/Bio/SCOP copying Bio/SCOP/__init__.py -> build/lib.linux-sparc-2.4/Bio/SCOP copying Bio/SCOP/FileIndex.py -> build/lib.linux-sparc-2.4/Bio/SCOP copying Bio/SCOP/Cla.py -> build/lib.linux-sparc-2.4/Bio/SCOP copying Bio/SCOP/Hie.py -> build/lib.linux-sparc-2.4/Bio/SCOP copying Bio/SCOP/Raf.py -> build/lib.linux-sparc-2.4/Bio/SCOP copying Bio/SCOP/Residues.py -> build/lib.linux-sparc-2.4/Bio/SCOP creating build/lib.linux-sparc-2.4/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> build/lib.linux-sparc-2.4/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-sparc-2.4/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> build/lib.linux-sparc-2.4/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-sparc-2.4/Bio/SeqIO copying Bio/SeqIO/__init__.py -> build/lib.linux-sparc-2.4/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-sparc-2.4/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-sparc-2.4/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> build/lib.linux-sparc-2.4/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> build/lib.linux-sparc-2.4/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-sparc-2.4/Bio/SeqIO creating build/lib.linux-sparc-2.4/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-sparc-2.4/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-sparc-2.4/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-sparc-2.4/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-sparc-2.4/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> build/lib.linux-sparc-2.4/Bio/SeqUtils copying Bio/SeqUtils/CodonUsage.py -> build/lib.linux-sparc-2.4/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> build/lib.linux-sparc-2.4/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-sparc-2.4/Bio/SeqUtils copying Bio/SeqUtils/CodonUsageIndices.py -> build/lib.linux-sparc-2.4/Bio/SeqUtils creating build/lib.linux-sparc-2.4/Bio/Sequencing copying Bio/Sequencing/Phd.py -> build/lib.linux-sparc-2.4/Bio/Sequencing copying Bio/Sequencing/Ace.py -> build/lib.linux-sparc-2.4/Bio/Sequencing copying Bio/Sequencing/__init__.py -> build/lib.linux-sparc-2.4/Bio/Sequencing creating build/lib.linux-sparc-2.4/Bio/Statistics copying Bio/Statistics/__init__.py -> build/lib.linux-sparc-2.4/Bio/Statistics copying Bio/Statistics/lowess.py -> build/lib.linux-sparc-2.4/Bio/Statistics creating build/lib.linux-sparc-2.4/Bio/SubsMat copying Bio/SubsMat/FreqTable.py -> build/lib.linux-sparc-2.4/Bio/SubsMat copying Bio/SubsMat/__init__.py -> build/lib.linux-sparc-2.4/Bio/SubsMat copying Bio/SubsMat/MatrixInfo.py -> build/lib.linux-sparc-2.4/Bio/SubsMat creating build/lib.linux-sparc-2.4/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/SVDSuperimposer.py -> build/lib.linux-sparc-2.4/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-sparc-2.4/Bio/SVDSuperimposer creating build/lib.linux-sparc-2.4/Bio/SwissProt copying Bio/SwissProt/SProt.py -> build/lib.linux-sparc-2.4/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> build/lib.linux-sparc-2.4/Bio/SwissProt copying Bio/SwissProt/__init__.py -> build/lib.linux-sparc-2.4/Bio/SwissProt creating build/lib.linux-sparc-2.4/Bio/UniGene copying Bio/UniGene/__init__.py -> build/lib.linux-sparc-2.4/Bio/UniGene creating build/lib.linux-sparc-2.4/Bio/writers copying Bio/writers/__init__.py -> build/lib.linux-sparc-2.4/Bio/writers creating build/lib.linux-sparc-2.4/Bio/writers/SeqRecord copying Bio/writers/SeqRecord/fasta.py -> build/lib.linux-sparc-2.4/Bio/writers/SeqRecord copying Bio/writers/SeqRecord/__init__.py -> build/lib.linux-sparc-2.4/Bio/writers/SeqRecord copying Bio/writers/SeqRecord/embl.py -> build/lib.linux-sparc-2.4/Bio/writers/SeqRecord copying Bio/writers/SeqRecord/empty.py -> build/lib.linux-sparc-2.4/Bio/writers/SeqRecord creating build/lib.linux-sparc-2.4/Bio/Wise copying Bio/Wise/dnal.py -> build/lib.linux-sparc-2.4/Bio/Wise copying Bio/Wise/__init__.py -> build/lib.linux-sparc-2.4/Bio/Wise copying Bio/Wise/psw.py -> build/lib.linux-sparc-2.4/Bio/Wise creating build/lib.linux-sparc-2.4/Bio/WWW copying Bio/WWW/__init__.py -> build/lib.linux-sparc-2.4/Bio/WWW creating build/lib.linux-sparc-2.4/BioSQL copying BioSQL/__init__.py -> build/lib.linux-sparc-2.4/BioSQL copying BioSQL/DBUtils.py -> build/lib.linux-sparc-2.4/BioSQL copying BioSQL/Loader.py -> build/lib.linux-sparc-2.4/BioSQL copying BioSQL/BioSeq.py -> build/lib.linux-sparc-2.4/BioSQL copying BioSQL/BioSeqDatabase.py -> build/lib.linux-sparc-2.4/BioSQL creating build/lib.linux-sparc-2.4/Martel copying Martel/LAX.py -> build/lib.linux-sparc-2.4/Martel copying Martel/IterParser.py -> build/lib.linux-sparc-2.4/Martel copying Martel/convert_re.py -> build/lib.linux-sparc-2.4/Martel copying Martel/msre_parse.py -> build/lib.linux-sparc-2.4/Martel copying Martel/optimize.py -> build/lib.linux-sparc-2.4/Martel copying Martel/Dispatch.py -> build/lib.linux-sparc-2.4/Martel copying Martel/RecordReader.py -> build/lib.linux-sparc-2.4/Martel copying Martel/msre_constants.py -> build/lib.linux-sparc-2.4/Martel copying Martel/__init__.py -> build/lib.linux-sparc-2.4/Martel copying Martel/Parser.py -> build/lib.linux-sparc-2.4/Martel copying Martel/Generate.py -> build/lib.linux-sparc-2.4/Martel copying Martel/setup.py -> build/lib.linux-sparc-2.4/Martel copying Martel/Expression.py -> build/lib.linux-sparc-2.4/Martel copying Martel/Time.py -> build/lib.linux-sparc-2.4/Martel copying Martel/Iterator.py -> build/lib.linux-sparc-2.4/Martel creating build/lib.linux-sparc-2.4/Bio/Affy copying Bio/Affy/__init__.py -> build/lib.linux-sparc-2.4/Bio/Affy copying Bio/Affy/CelFile.py -> build/lib.linux-sparc-2.4/Bio/Affy creating build/lib.linux-sparc-2.4/Bio/Cluster copying Bio/Cluster/__init__.py -> build/lib.linux-sparc-2.4/Bio/Cluster creating build/lib.linux-sparc-2.4/Bio/KDTree copying Bio/KDTree/__init__.py -> build/lib.linux-sparc-2.4/Bio/KDTree copying Bio/KDTree/KDTree.py -> build/lib.linux-sparc-2.4/Bio/KDTree creating build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_020511.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.linux-sparc-2.4/Bio/Entrez/DTDs copying Bio/EUtils/DTDs/LinkOut.dtd -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eSearch_020511.dtd -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/ePost_020511.dtd -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eSummary_020511.dtd -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eInfo_020511.dtd -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs copying Bio/EUtils/DTDs/eLink_020511.dtd -> build/lib.linux-sparc-2.4/Bio/EUtils/DTDs creating build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/island.par -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/ssm_1d.par -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_ssm_1d.par -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/simple.par -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/ssm_2d.par -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/decline_lambda.par -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_island.par -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/bottle.par -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_ssm_2d.par -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/decline_split.par -> build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data running build_ext building 'Bio.clistfns' extension creating build/temp.linux-sparc-2.4 creating build/temp.linux-sparc-2.4/Bio gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/include/python2.4 -c Bio/clistfnsmodule.c -o build/temp.linux-sparc-2.4/Bio/clistfnsmodule.o gcc -pthread -shared -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.4/Bio/clistfnsmodule.o -o build/lib.linux-sparc-2.4/Bio/clistfns.so building 'Bio.cmathfns' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.4 -c Bio/cmathfnsmodule.c -o build/temp.linux-sparc-2.4/Bio/cmathfnsmodule.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.4 -c Bio/csupport.c -o build/temp.linux-sparc-2.4/Bio/csupport.o gcc -pthread -shared -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.4/Bio/cmathfnsmodule.o build/temp.linux-sparc-2.4/Bio/csupport.o -o build/lib.linux-sparc-2.4/Bio/cmathfns.so building 'Bio.cstringfns' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/include/python2.4 -c Bio/cstringfnsmodule.c -o build/temp.linux-sparc-2.4/Bio/cstringfnsmodule.o Bio/cstringfnsmodule.c: In function 'cstringfns_splitany': Bio/cstringfnsmodule.c:34: warning: pointer targets in initialization differ in signedness Bio/cstringfnsmodule.c:71: warning: pointer targets in passing argument 1 of 'PyString_FromStringAndSize' differ in signedness Bio/cstringfnsmodule.c:85: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/cstringfnsmodule.c:87: warning: pointer targets in passing argument 1 of 'PyString_FromStringAndSize' differ in signedness gcc -pthread -shared -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.4/Bio/cstringfnsmodule.o -o build/lib.linux-sparc-2.4/Bio/cstringfns.so building 'Bio.cpairwise2' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.4 -c Bio/cpairwise2module.c -o build/temp.linux-sparc-2.4/Bio/cpairwise2module.o gcc -pthread -shared -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.4/Bio/cpairwise2module.o build/temp.linux-sparc-2.4/Bio/csupport.o -o build/lib.linux-sparc-2.4/Bio/cpairwise2.so building 'Bio.trie' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.4 -c Bio/triemodule.c -o build/temp.linux-sparc-2.4/Bio/triemodule.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.4 -c Bio/trie.c -o build/temp.linux-sparc-2.4/Bio/trie.o Bio/trie.c: In function 'Trie_set': Bio/trie.c:103: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:103: warning: pointer targets in passing argument 1 of '__strdup' differ in signedness Bio/trie.c:156: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:162: warning: pointer targets in passing argument 1 of 'strncpy' differ in signedness Bio/trie.c:162: warning: pointer targets in passing argument 2 of 'strncpy' differ in signedness Bio/trie.c:164: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:164: warning: pointer targets in passing argument 1 of '__strdup' differ in signedness Bio/trie.c: In function 'Trie_get': Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 1 of 'strncmp' differ in signedness Bio/trie.c:229: warning: pointer targets in passing argument 2 of 'strncmp' differ in signedness Bio/trie.c:235: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c: In function '_get_approximate_transition': Bio/trie.c:268: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:272: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:272: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:284: warning: pointer targets in passing argument 1 of 'strncat' differ in signedness Bio/trie.c:284: warning: pointer targets in passing argument 2 of 'strncat' differ in signedness Bio/trie.c: In function '_get_approximate_trie': Bio/trie.c:353: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:355: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:356: warning: pointer targets in passing argument 1 of 'strcat' differ in signedness Bio/trie.c:356: warning: pointer targets in passing argument 2 of 'strcat' differ in signedness Bio/trie.c:367: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:369: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c: In function 'Trie_has_prefix': Bio/trie.c:440: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:441: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 1 of 'strncmp' differ in signedness Bio/trie.c:443: warning: pointer targets in passing argument 2 of 'strncmp' differ in signedness Bio/trie.c: In function '_iterate_helper': Bio/trie.c:468: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:470: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:475: warning: pointer targets in passing argument 1 of 'strcat' differ in signedness Bio/trie.c:475: warning: pointer targets in passing argument 2 of 'strcat' differ in signedness Bio/trie.c: In function '_with_prefix_helper': Bio/trie.c:521: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:522: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 2 of '__builtin_strcmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 1 of 'strncmp' differ in signedness Bio/trie.c:524: warning: pointer targets in passing argument 2 of 'strncmp' differ in signedness Bio/trie.c:530: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:536: warning: pointer targets in passing argument 1 of 'strncat' differ in signedness Bio/trie.c:536: warning: pointer targets in passing argument 2 of 'strncat' differ in signedness Bio/trie.c: In function '_serialize_transition': Bio/trie.c:621: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c: In function '_deserialize_transition': Bio/trie.c:708: warning: pointer targets in passing argument 1 of 'strlen' differ in signedness Bio/trie.c:708: warning: pointer targets in passing argument 1 of '__strdup' differ in signedness Bio/trie.c: In function 'test': Bio/trie.c:752: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:753: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:754: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:755: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:757: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:758: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:759: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:760: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:762: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:763: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:765: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness Bio/trie.c:768: warning: pointer targets in passing argument 2 of 'Trie_set' differ in signedness Bio/trie.c:769: warning: pointer targets in passing argument 2 of 'Trie_get' differ in signedness gcc -pthread -shared -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.4/Bio/triemodule.o build/temp.linux-sparc-2.4/Bio/trie.o -o build/lib.linux-sparc-2.4/Bio/trie.so building 'Bio.cMarkovModel' extension gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.4 -c Bio/cMarkovModelmodule.c -o build/temp.linux-sparc-2.4/Bio/cMarkovModelmodule.o gcc -pthread -shared -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.4/Bio/cMarkovModelmodule.o build/temp.linux-sparc-2.4/Bio/csupport.o -o build/lib.linux-sparc-2.4/Bio/cMarkovModel.so building 'Bio.PDB.mmCIF.MMCIFlex' extension creating build/temp.linux-sparc-2.4/Bio/PDB creating build/temp.linux-sparc-2.4/Bio/PDB/mmCIF gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.4 -c Bio/PDB/mmCIF/lex.yy.c -o build/temp.linux-sparc-2.4/Bio/PDB/mmCIF/lex.yy.o lex.yy.c: In function 'yylex': mmcif.lex:43: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result mmcif.lex: At top level: mmcif.lex:52: warning: function declaration isn't a prototype lex.yy.c:1046: warning: 'yyunput' defined but not used lex.yy.c:1088: warning: 'input' defined but not used gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -IBio -I/usr/include/python2.4 -c Bio/PDB/mmCIF/MMCIFlexmodule.c -o build/temp.linux-sparc-2.4/Bio/PDB/mmCIF/MMCIFlexmodule.o Bio/PDB/mmCIF/MMCIFlexmodule.c: In function 'MMCIFlex_open_file': Bio/PDB/mmCIF/MMCIFlexmodule.c:16: warning: implicit declaration of function 'mmcif_set_file' Bio/PDB/mmCIF/MMCIFlexmodule.c: In function 'MMCIFlex_get_token': Bio/PDB/mmCIF/MMCIFlexmodule.c:44: warning: implicit declaration of function 'mmcif_get_token' Bio/PDB/mmCIF/MMCIFlexmodule.c: At top level: Bio/PDB/mmCIF/MMCIFlexmodule.c:67: warning: function declaration isn't a prototype gcc -pthread -shared -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.4/Bio/PDB/mmCIF/lex.yy.o build/temp.linux-sparc-2.4/Bio/PDB/mmCIF/MMCIFlexmodule.o -lfl -o build/lib.linux-sparc-2.4/Bio/PDB/mmCIF/MMCIFlex.so building 'Bio.Nexus.cnexus' extension creating build/temp.linux-sparc-2.4/Bio/Nexus gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/include/python2.4 -c Bio/Nexus/cnexus.c -o build/temp.linux-sparc-2.4/Bio/Nexus/cnexus.o gcc -pthread -shared -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.4/Bio/Nexus/cnexus.o -o build/lib.linux-sparc-2.4/Bio/Nexus/cnexus.so building 'Bio.Restriction.DNAUtils' extension creating build/temp.linux-sparc-2.4/Bio/Restriction gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/include/python2.4 -c Bio/Restriction/DNAUtils.c -o build/temp.linux-sparc-2.4/Bio/Restriction/DNAUtils.o gcc -pthread -shared -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.4/Bio/Restriction/DNAUtils.o -o build/lib.linux-sparc-2.4/Bio/Restriction/DNAUtils.so building 'Bio.Cluster.cluster' extension creating build/temp.linux-sparc-2.4/Bio/Cluster gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/lib/python2.4/site-packages/numpy/core/include -I/usr/include/python2.4 -c Bio/Cluster/clustermodule.c -o build/temp.linux-sparc-2.4/Bio/Cluster/clustermodule.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/lib/python2.4/site-packages/numpy/core/include -I/usr/include/python2.4 -c Bio/Cluster/cluster.c -o build/temp.linux-sparc-2.4/Bio/Cluster/cluster.o gcc -pthread -shared -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.4/Bio/Cluster/clustermodule.o build/temp.linux-sparc-2.4/Bio/Cluster/cluster.o -o build/lib.linux-sparc-2.4/Bio/Cluster/cluster.so building 'Bio.KDTree._CKDTree' extension creating build/temp.linux-sparc-2.4/Bio/KDTree gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/lib/python2.4/site-packages/numpy/core/include -I/usr/include/python2.4 -c Bio/KDTree/KDTree.c -o build/temp.linux-sparc-2.4/Bio/KDTree/KDTree.o gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fPIC -I/usr/lib/python2.4/site-packages/numpy/core/include -I/usr/include/python2.4 -c Bio/KDTree/KDTreemodule.c -o build/temp.linux-sparc-2.4/Bio/KDTree/KDTreemodule.o gcc -pthread -shared -Wl,-Bsymbolic-functions -g -O2 build/temp.linux-sparc-2.4/Bio/KDTree/KDTree.o build/temp.linux-sparc-2.4/Bio/KDTree/KDTreemodule.o -o build/lib.linux-sparc-2.4/Bio/KDTree/_CKDTree.so touch build-stamp /usr/bin/fakeroot debian/rules binary-arch echo sparc sparc yes | python2.5 setup.py build running build running build_py running build_ext echo sparc sparc yes | python2.4 setup.py build running build running build_py running build_ext touch build-stamp dh_testdir dh_testroot yes | python2.5 setup.py install --root /build/buildd/python-biopython-1.49/debian/python2.5-tmp running install running build running build_py running build_ext running install_lib creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5 creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/Transcribe.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/pairwise2.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/MarkovModel.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/Search.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/EZRetrieve.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/DocSQL.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/mathfns.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/utils.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/StdHandler.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/SeqFeature.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/Translate.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/HotRand.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/MaxEntropy.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/File.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/Seq.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/Std.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/DBXRef.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/distance.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/FilteredReader.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/stringfns.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/ParserSupport.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/Index.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/NetCatch.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/SeqRecord.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/PubMed.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/NaiveBayes.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/ExPASy.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/listfns.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/Writer.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/triefind.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/Decode.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/LogisticRegression.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/kNN.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/PropertyManager.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Align copying build/lib.linux-sparc-2.5/Bio/Align/AlignInfo.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Align copying build/lib.linux-sparc-2.5/Bio/Align/FormatConvert.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Align copying build/lib.linux-sparc-2.5/Bio/Align/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Align copying build/lib.linux-sparc-2.5/Bio/Align/Generic.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Align creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.5/Bio/AlignIO/NexusIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.5/Bio/AlignIO/EmbossIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.5/Bio/AlignIO/ClustalIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.5/Bio/AlignIO/StockholmIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.5/Bio/AlignIO/FastaIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.5/Bio/AlignIO/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.5/Bio/AlignIO/Interfaces.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.5/Bio/AlignIO/PhylipIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.5/Bio/AlignAce/Motif.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.5/Bio/AlignAce/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.5/Bio/AlignAce/Parser.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.5/Bio/AlignAce/CompareAceStandalone.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.5/Bio/AlignAce/AlignAceStandalone.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.5/Bio/AlignAce/Applications.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.5/Bio/AlignAce/Scanner.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Alphabet copying build/lib.linux-sparc-2.5/Bio/Alphabet/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Alphabet copying build/lib.linux-sparc-2.5/Bio/Alphabet/IUPAC.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Alphabet copying build/lib.linux-sparc-2.5/Bio/Alphabet/Reduced.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Alphabet creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Application copying build/lib.linux-sparc-2.5/Bio/Application/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Application creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast copying build/lib.linux-sparc-2.5/Bio/Blast/NCBIStandalone.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast copying build/lib.linux-sparc-2.5/Bio/Blast/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast copying build/lib.linux-sparc-2.5/Bio/Blast/NCBIWWW.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast copying build/lib.linux-sparc-2.5/Bio/Blast/NCBIXML.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast copying build/lib.linux-sparc-2.5/Bio/Blast/Applications.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast copying build/lib.linux-sparc-2.5/Bio/Blast/ParseBlastTable.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast copying build/lib.linux-sparc-2.5/Bio/Blast/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/CAPS copying build/lib.linux-sparc-2.5/Bio/CAPS/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/CAPS creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Compass copying build/lib.linux-sparc-2.5/Bio/Compass/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Compass creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Clustalw copying build/lib.linux-sparc-2.5/Bio/Clustalw/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Clustalw creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Crystal copying build/lib.linux-sparc-2.5/Bio/Crystal/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Crystal creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Data copying build/lib.linux-sparc-2.5/Bio/Data/IUPACData.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Data copying build/lib.linux-sparc-2.5/Bio/Data/CodonTable.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Data copying build/lib.linux-sparc-2.5/Bio/Data/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Data creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.5/Bio/Emboss/PrimerSearch.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.5/Bio/Emboss/Primer.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.5/Bio/Emboss/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.5/Bio/Emboss/primer3_format.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.5/Bio/Emboss/Primer3.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.5/Bio/Emboss/Applications.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.5/Bio/Emboss/primersearch_format.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Encodings copying build/lib.linux-sparc-2.5/Bio/Encodings/IUPACEncoding.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Encodings copying build/lib.linux-sparc-2.5/Bio/Encodings/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Encodings creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez copying build/lib.linux-sparc-2.5/Bio/Entrez/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez copying build/lib.linux-sparc-2.5/Bio/Entrez/Parser.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez copying build/lib.linux-sparc-2.5/Bio/Entrez/SerialSet.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/eSearch_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/ePost_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/taxon.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/pubmed_080101.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/SP_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/eSummary_041029.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/egquery.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/eInfo_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/eSpell.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/eLink_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.5/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Enzyme copying build/lib.linux-sparc-2.5/Bio/Enzyme/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Enzyme creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/ThinClient.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/ReseekFile.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/Datatypes.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/POM.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/parse.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/Mixins.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/HistoryClient.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/DBIdsClient.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/setup.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/Config.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/dtd2py.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/sourcegen.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.5/Bio/EUtils/MultiDict.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/eSearch_020511.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/eSummary_020511.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/eLink_020511.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/eInfo_020511.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/ePost_020511.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/LinkOut.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/LinkOut.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/eSearch_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/ePost_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/eSummary_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/eInfo_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.5/Bio/EUtils/DTDs/eLink_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Fasta copying build/lib.linux-sparc-2.5/Bio/Fasta/FastaAlign.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Fasta copying build/lib.linux-sparc-2.5/Bio/Fasta/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Fasta creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/FSSP copying build/lib.linux-sparc-2.5/Bio/FSSP/fssp_rec.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/FSSP copying build/lib.linux-sparc-2.5/Bio/FSSP/FSSPTools.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/FSSP copying build/lib.linux-sparc-2.5/Bio/FSSP/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/FSSP creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA copying build/lib.linux-sparc-2.5/Bio/GA/Evolver.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA copying build/lib.linux-sparc-2.5/Bio/GA/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA copying build/lib.linux-sparc-2.5/Bio/GA/Organism.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.5/Bio/GA/Crossover/GeneralPoint.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.5/Bio/GA/Crossover/Point.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.5/Bio/GA/Crossover/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.5/Bio/GA/Crossover/TwoPoint.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.5/Bio/GA/Crossover/General.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.5/Bio/GA/Crossover/Uniform.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Mutation copying build/lib.linux-sparc-2.5/Bio/GA/Mutation/Simple.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Mutation copying build/lib.linux-sparc-2.5/Bio/GA/Mutation/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Mutation copying build/lib.linux-sparc-2.5/Bio/GA/Mutation/General.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Mutation creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Repair copying build/lib.linux-sparc-2.5/Bio/GA/Repair/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Repair copying build/lib.linux-sparc-2.5/Bio/GA/Repair/Stabilizing.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Repair creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Selection copying build/lib.linux-sparc-2.5/Bio/GA/Selection/Diversity.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Selection copying build/lib.linux-sparc-2.5/Bio/GA/Selection/RouletteWheel.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Selection copying build/lib.linux-sparc-2.5/Bio/GA/Selection/Abstract.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Selection copying build/lib.linux-sparc-2.5/Bio/GA/Selection/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Selection copying build/lib.linux-sparc-2.5/Bio/GA/Selection/Tournament.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Selection creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GenBank copying build/lib.linux-sparc-2.5/Bio/GenBank/utils.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GenBank copying build/lib.linux-sparc-2.5/Bio/GenBank/LocationParser.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GenBank copying build/lib.linux-sparc-2.5/Bio/GenBank/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GenBank copying build/lib.linux-sparc-2.5/Bio/GenBank/Scanner.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GenBank copying build/lib.linux-sparc-2.5/Bio/GenBank/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GenBank creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Geo copying build/lib.linux-sparc-2.5/Bio/Geo/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Geo copying build/lib.linux-sparc-2.5/Bio/Geo/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Geo creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GFF copying build/lib.linux-sparc-2.5/Bio/GFF/easy.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GFF copying build/lib.linux-sparc-2.5/Bio/GFF/GenericTools.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GFF copying build/lib.linux-sparc-2.5/Bio/GFF/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GFF copying build/lib.linux-sparc-2.5/Bio/GFF/binning.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GFF creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Graphics copying build/lib.linux-sparc-2.5/Bio/Graphics/DisplayRepresentation.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Graphics copying build/lib.linux-sparc-2.5/Bio/Graphics/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Graphics copying build/lib.linux-sparc-2.5/Bio/Graphics/Distribution.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Graphics copying build/lib.linux-sparc-2.5/Bio/Graphics/BasicChromosome.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Graphics copying build/lib.linux-sparc-2.5/Bio/Graphics/Comparative.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Graphics creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HMM copying build/lib.linux-sparc-2.5/Bio/HMM/MarkovModel.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HMM copying build/lib.linux-sparc-2.5/Bio/HMM/Utilities.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HMM copying build/lib.linux-sparc-2.5/Bio/HMM/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HMM copying build/lib.linux-sparc-2.5/Bio/HMM/DynamicProgramming.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HMM copying build/lib.linux-sparc-2.5/Bio/HMM/Trainer.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HMM creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/IntelliGenetics copying build/lib.linux-sparc-2.5/Bio/IntelliGenetics/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/IntelliGenetics copying build/lib.linux-sparc-2.5/Bio/IntelliGenetics/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/IntelliGenetics copying build/lib.linux-sparc-2.5/Bio/IntelliGenetics/intelligenetics_format.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/IntelliGenetics creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/InterPro copying build/lib.linux-sparc-2.5/Bio/InterPro/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/InterPro creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG copying build/lib.linux-sparc-2.5/Bio/KEGG/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG/Compound copying build/lib.linux-sparc-2.5/Bio/KEGG/Compound/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG/Compound creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG/Enzyme copying build/lib.linux-sparc-2.5/Bio/KEGG/Enzyme/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG/Enzyme creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG/Map copying build/lib.linux-sparc-2.5/Bio/KEGG/Map/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG/Map creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Medline copying build/lib.linux-sparc-2.5/Bio/Medline/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Medline creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MEME copying build/lib.linux-sparc-2.5/Bio/MEME/Motif.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MEME copying build/lib.linux-sparc-2.5/Bio/MEME/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MEME copying build/lib.linux-sparc-2.5/Bio/MEME/Parser.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MEME creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MetaTool copying build/lib.linux-sparc-2.5/Bio/MetaTool/Input.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MetaTool copying build/lib.linux-sparc-2.5/Bio/MetaTool/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MetaTool copying build/lib.linux-sparc-2.5/Bio/MetaTool/metatool_format.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MetaTool copying build/lib.linux-sparc-2.5/Bio/MetaTool/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MetaTool creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.5/Bio/Mindy/compression.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.5/Bio/Mindy/Location.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.5/Bio/Mindy/BaseDB.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.5/Bio/Mindy/SimpleSeqRecord.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.5/Bio/Mindy/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.5/Bio/Mindy/FlatDB.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.5/Bio/Mindy/BerkeleyDB.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.5/Bio/Mindy/XPath.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NBRF copying build/lib.linux-sparc-2.5/Bio/NBRF/nbrf_format.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NBRF copying build/lib.linux-sparc-2.5/Bio/NBRF/ValSeq.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NBRF copying build/lib.linux-sparc-2.5/Bio/NBRF/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NBRF copying build/lib.linux-sparc-2.5/Bio/NBRF/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NBRF creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Ndb copying build/lib.linux-sparc-2.5/Bio/Ndb/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Ndb creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork copying build/lib.linux-sparc-2.5/Bio/NeuralNetwork/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork copying build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Training.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork copying build/lib.linux-sparc-2.5/Bio/NeuralNetwork/StopTraining.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-sparc-2.5/Bio/NeuralNetwork/BackPropagation/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-sparc-2.5/Bio/NeuralNetwork/BackPropagation/Layer.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-sparc-2.5/Bio/NeuralNetwork/BackPropagation/Network.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/BackPropagation creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Gene/Motif.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Gene/Schema.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Gene/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Gene/Pattern.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-sparc-2.5/Bio/NeuralNetwork/Gene/Signature.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Gene creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Nexus copying build/lib.linux-sparc-2.5/Bio/Nexus/Nexus.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Nexus copying build/lib.linux-sparc-2.5/Bio/Nexus/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Nexus copying build/lib.linux-sparc-2.5/Bio/Nexus/Trees.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Nexus copying build/lib.linux-sparc-2.5/Bio/Nexus/Nodes.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Nexus copying build/lib.linux-sparc-2.5/Bio/Nexus/cnexus.so -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Nexus creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NMR copying build/lib.linux-sparc-2.5/Bio/NMR/NOEtools.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NMR copying build/lib.linux-sparc-2.5/Bio/NMR/xpktools.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NMR copying build/lib.linux-sparc-2.5/Bio/NMR/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NMR creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Parsers copying build/lib.linux-sparc-2.5/Bio/Parsers/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Parsers copying build/lib.linux-sparc-2.5/Bio/Parsers/spark.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Parsers creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway copying build/lib.linux-sparc-2.5/Bio/Pathway/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway/Rep copying build/lib.linux-sparc-2.5/Bio/Pathway/Rep/Graph.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway/Rep copying build/lib.linux-sparc-2.5/Bio/Pathway/Rep/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway/Rep copying build/lib.linux-sparc-2.5/Bio/Pathway/Rep/MultiGraph.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway/Rep copying build/lib.linux-sparc-2.5/Bio/Pathway/Rep/HashSet.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway/Rep creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/PDBParser.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/Selection.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/Polypeptide.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/StructureBuilder.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/MMCIFParser.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/Dice.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/Residue.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/StructureAlignment.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/Chain.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/PDBExceptions.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/AbstractPropertyMap.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/NeighborSearch.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/PDBList.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/NACCESS.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/FragmentMapper.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/PSEA.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/ResidueDepth.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/DSSP.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/Model.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/Entity.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/Atom.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/Vector.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/Superimposer.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/parse_pdb_header.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/HSExposure.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/PDBIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/MMCIF2Dict.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB copying build/lib.linux-sparc-2.5/Bio/PDB/Structure.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/mmCIF copying build/lib.linux-sparc-2.5/Bio/PDB/mmCIF/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/mmCIF copying build/lib.linux-sparc-2.5/Bio/PDB/mmCIF/MMCIFlex.so -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/mmCIF creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen copying build/lib.linux-sparc-2.5/Bio/PopGen/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/Async copying build/lib.linux-sparc-2.5/Bio/PopGen/Async/Local.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/Async copying build/lib.linux-sparc-2.5/Bio/PopGen/Async/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/Async creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/FDist copying build/lib.linux-sparc-2.5/Bio/PopGen/FDist/Async.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/FDist copying build/lib.linux-sparc-2.5/Bio/PopGen/FDist/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/FDist copying build/lib.linux-sparc-2.5/Bio/PopGen/FDist/Controller.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/FDist copying build/lib.linux-sparc-2.5/Bio/PopGen/FDist/Utils.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/FDist creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/GenePop copying build/lib.linux-sparc-2.5/Bio/PopGen/GenePop/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/GenePop copying build/lib.linux-sparc-2.5/Bio/PopGen/GenePop/Utils.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/GenePop creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/Async.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/Template.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/Controller.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/Cache.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data/island.par -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data/ssm_1d.par -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data/split_ssm_1d.par -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data/simple.par -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data/ssm_2d.par -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data/decline_lambda.par -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data/split_island.par -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data/bottle.par -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data/split_ssm_2d.par -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.5/Bio/PopGen/SimCoal/data/decline_split.par -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/data creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Prosite copying build/lib.linux-sparc-2.5/Bio/Prosite/Prodoc.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Prosite copying build/lib.linux-sparc-2.5/Bio/Prosite/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Prosite copying build/lib.linux-sparc-2.5/Bio/Prosite/Pattern.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Prosite creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction copying build/lib.linux-sparc-2.5/Bio/Restriction/Restriction_Dictionary.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction copying build/lib.linux-sparc-2.5/Bio/Restriction/Restriction.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction copying build/lib.linux-sparc-2.5/Bio/Restriction/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction copying build/lib.linux-sparc-2.5/Bio/Restriction/RanaConfig.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction copying build/lib.linux-sparc-2.5/Bio/Restriction/PrintFormat.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/_Update copying build/lib.linux-sparc-2.5/Bio/Restriction/_Update/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/_Update copying build/lib.linux-sparc-2.5/Bio/Restriction/_Update/RestrictionCompiler.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/_Update copying build/lib.linux-sparc-2.5/Bio/Restriction/_Update/Update.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/_Update copying build/lib.linux-sparc-2.5/Bio/Restriction/DNAUtils.so -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Saf copying build/lib.linux-sparc-2.5/Bio/Saf/saf_format.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Saf copying build/lib.linux-sparc-2.5/Bio/Saf/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Saf copying build/lib.linux-sparc-2.5/Bio/Saf/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Saf creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.5/Bio/SCOP/Des.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.5/Bio/SCOP/Dom.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.5/Bio/SCOP/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.5/Bio/SCOP/FileIndex.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.5/Bio/SCOP/Cla.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.5/Bio/SCOP/Hie.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.5/Bio/SCOP/Raf.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.5/Bio/SCOP/Residues.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.5/Bio/SeqIO/IgIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.5/Bio/SeqIO/SwissIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.5/Bio/SeqIO/PirIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.5/Bio/SeqIO/FastaIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.5/Bio/SeqIO/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.5/Bio/SeqIO/InsdcIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.5/Bio/SeqIO/Interfaces.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.5/Bio/SeqIO/AceIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.5/Bio/SeqIO/TabIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.5/Bio/SeqIO/PhdIO.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.5/Bio/SeqUtils/CheckSum.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.5/Bio/SeqUtils/ProtParamData.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.5/Bio/SeqUtils/MeltingTemp.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.5/Bio/SeqUtils/IsoelectricPoint.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.5/Bio/SeqUtils/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.5/Bio/SeqUtils/CodonUsage.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.5/Bio/SeqUtils/lcc.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.5/Bio/SeqUtils/ProtParam.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.5/Bio/SeqUtils/CodonUsageIndices.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Sequencing copying build/lib.linux-sparc-2.5/Bio/Sequencing/Phd.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Sequencing copying build/lib.linux-sparc-2.5/Bio/Sequencing/Ace.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Sequencing copying build/lib.linux-sparc-2.5/Bio/Sequencing/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Sequencing creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Statistics copying build/lib.linux-sparc-2.5/Bio/Statistics/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Statistics copying build/lib.linux-sparc-2.5/Bio/Statistics/lowess.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Statistics creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SubsMat copying build/lib.linux-sparc-2.5/Bio/SubsMat/FreqTable.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SubsMat copying build/lib.linux-sparc-2.5/Bio/SubsMat/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SubsMat copying build/lib.linux-sparc-2.5/Bio/SubsMat/MatrixInfo.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SubsMat creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SVDSuperimposer copying build/lib.linux-sparc-2.5/Bio/SVDSuperimposer/SVDSuperimposer.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SVDSuperimposer copying build/lib.linux-sparc-2.5/Bio/SVDSuperimposer/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SVDSuperimposer creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SwissProt copying build/lib.linux-sparc-2.5/Bio/SwissProt/SProt.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SwissProt copying build/lib.linux-sparc-2.5/Bio/SwissProt/KeyWList.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SwissProt copying build/lib.linux-sparc-2.5/Bio/SwissProt/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SwissProt creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/UniGene copying build/lib.linux-sparc-2.5/Bio/UniGene/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/UniGene creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers copying build/lib.linux-sparc-2.5/Bio/writers/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers/SeqRecord copying build/lib.linux-sparc-2.5/Bio/writers/SeqRecord/fasta.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers/SeqRecord copying build/lib.linux-sparc-2.5/Bio/writers/SeqRecord/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers/SeqRecord copying build/lib.linux-sparc-2.5/Bio/writers/SeqRecord/embl.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers/SeqRecord copying build/lib.linux-sparc-2.5/Bio/writers/SeqRecord/empty.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers/SeqRecord creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Wise copying build/lib.linux-sparc-2.5/Bio/Wise/dnal.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Wise copying build/lib.linux-sparc-2.5/Bio/Wise/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Wise copying build/lib.linux-sparc-2.5/Bio/Wise/psw.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Wise creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/WWW copying build/lib.linux-sparc-2.5/Bio/WWW/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/WWW creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Affy copying build/lib.linux-sparc-2.5/Bio/Affy/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Affy copying build/lib.linux-sparc-2.5/Bio/Affy/CelFile.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Affy creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Cluster copying build/lib.linux-sparc-2.5/Bio/Cluster/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Cluster copying build/lib.linux-sparc-2.5/Bio/Cluster/cluster.so -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Cluster creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KDTree copying build/lib.linux-sparc-2.5/Bio/KDTree/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KDTree copying build/lib.linux-sparc-2.5/Bio/KDTree/KDTree.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KDTree copying build/lib.linux-sparc-2.5/Bio/KDTree/_CKDTree.so -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KDTree copying build/lib.linux-sparc-2.5/Bio/clistfns.so -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/cmathfns.so -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/cstringfns.so -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/cpairwise2.so -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/trie.so -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio copying build/lib.linux-sparc-2.5/Bio/cMarkovModel.so -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/BioSQL copying build/lib.linux-sparc-2.5/BioSQL/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/BioSQL copying build/lib.linux-sparc-2.5/BioSQL/DBUtils.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/BioSQL copying build/lib.linux-sparc-2.5/BioSQL/Loader.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/BioSQL copying build/lib.linux-sparc-2.5/BioSQL/BioSeq.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/BioSQL copying build/lib.linux-sparc-2.5/BioSQL/BioSeqDatabase.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/BioSQL creating /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/LAX.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/IterParser.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/convert_re.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/msre_parse.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/optimize.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/Dispatch.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/RecordReader.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/msre_constants.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/Parser.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/Generate.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/setup.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/Expression.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/Time.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel copying build/lib.linux-sparc-2.5/Martel/Iterator.py -> /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Transcribe.py to Transcribe.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/pairwise2.py to pairwise2.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MarkovModel.py to MarkovModel.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Search.py to Search.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EZRetrieve.py to EZRetrieve.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/DocSQL.py to DocSQL.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/mathfns.py to mathfns.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/utils.py to utils.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/StdHandler.py to StdHandler.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqFeature.py to SeqFeature.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Translate.py to Translate.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HotRand.py to HotRand.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MaxEntropy.py to MaxEntropy.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/File.py to File.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Seq.py to Seq.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Std.py to Std.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/DBXRef.py to DBXRef.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/distance.py to distance.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/FilteredReader.py to FilteredReader.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/stringfns.py to stringfns.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/ParserSupport.py to ParserSupport.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Index.py to Index.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NetCatch.py to NetCatch.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqRecord.py to SeqRecord.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PubMed.py to PubMed.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NaiveBayes.py to NaiveBayes.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/ExPASy.py to ExPASy.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/listfns.py to listfns.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Writer.py to Writer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/triefind.py to triefind.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Decode.py to Decode.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/LogisticRegression.py to LogisticRegression.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/kNN.py to kNN.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PropertyManager.py to PropertyManager.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Align/AlignInfo.py to AlignInfo.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Align/FormatConvert.py to FormatConvert.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Align/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Align/Generic.py to Generic.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO/NexusIO.py to NexusIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO/EmbossIO.py to EmbossIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO/ClustalIO.py to ClustalIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO/StockholmIO.py to StockholmIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO/FastaIO.py to FastaIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO/Interfaces.py to Interfaces.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignIO/PhylipIO.py to PhylipIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce/Motif.py to Motif.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce/Parser.py to Parser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce/CompareAceStandalone.py to CompareAceStandalone.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce/AlignAceStandalone.py to AlignAceStandalone.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce/Applications.py to Applications.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/AlignAce/Scanner.py to Scanner.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Alphabet/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Alphabet/IUPAC.py to IUPAC.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Alphabet/Reduced.py to Reduced.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Application/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast/NCBIStandalone.py to NCBIStandalone.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast/NCBIWWW.py to NCBIWWW.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast/NCBIXML.py to NCBIXML.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast/Applications.py to Applications.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast/ParseBlastTable.py to ParseBlastTable.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Blast/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/CAPS/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Compass/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Clustalw/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Crystal/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Data/IUPACData.py to IUPACData.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Data/CodonTable.py to CodonTable.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Data/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss/Primer.py to Primer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss/primer3_format.py to primer3_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss/Primer3.py to Primer3.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss/Applications.py to Applications.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Emboss/primersearch_format.py to primersearch_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Encodings/IUPACEncoding.py to IUPACEncoding.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Encodings/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/Parser.py to Parser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/SerialSet.py to SerialSet.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Enzyme/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/ThinClient.py to ThinClient.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/ReseekFile.py to ReseekFile.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/Datatypes.py to Datatypes.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/POM.py to POM.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/parse.py to parse.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/Mixins.py to Mixins.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/HistoryClient.py to HistoryClient.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DBIdsClient.py to DBIdsClient.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/setup.py to setup.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/Config.py to Config.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/dtd2py.py to dtd2py.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/sourcegen.py to sourcegen.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/MultiDict.py to MultiDict.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs/eSearch_020511.py to eSearch_020511.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs/eSummary_020511.py to eSummary_020511.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs/eLink_020511.py to eLink_020511.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs/eInfo_020511.py to eInfo_020511.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs/ePost_020511.py to ePost_020511.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs/LinkOut.py to LinkOut.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Fasta/FastaAlign.py to FastaAlign.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Fasta/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/FSSP/fssp_rec.py to fssp_rec.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/FSSP/FSSPTools.py to FSSPTools.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/FSSP/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Evolver.py to Evolver.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Organism.py to Organism.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover/GeneralPoint.py to GeneralPoint.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover/Point.py to Point.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover/TwoPoint.py to TwoPoint.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover/General.py to General.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Crossover/Uniform.py to Uniform.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Mutation/Simple.py to Simple.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Mutation/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Mutation/General.py to General.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Repair/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Repair/Stabilizing.py to Stabilizing.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Selection/Diversity.py to Diversity.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Selection/RouletteWheel.py to RouletteWheel.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Selection/Abstract.py to Abstract.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Selection/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GA/Selection/Tournament.py to Tournament.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GenBank/utils.py to utils.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GenBank/LocationParser.py to LocationParser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GenBank/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GenBank/Scanner.py to Scanner.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GenBank/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Geo/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Geo/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GFF/easy.py to easy.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GFF/GenericTools.py to GenericTools.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GFF/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/GFF/binning.py to binning.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Graphics/DisplayRepresentation.py to DisplayRepresentation.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Graphics/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Graphics/Distribution.py to Distribution.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Graphics/BasicChromosome.py to BasicChromosome.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Graphics/Comparative.py to Comparative.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HMM/MarkovModel.py to MarkovModel.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HMM/Utilities.py to Utilities.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HMM/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/HMM/Trainer.py to Trainer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/IntelliGenetics/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/IntelliGenetics/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/IntelliGenetics/intelligenetics_format.py to intelligenetics_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/InterPro/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG/Compound/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG/Enzyme/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KEGG/Map/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Medline/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MEME/Motif.py to Motif.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MEME/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MEME/Parser.py to Parser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MetaTool/Input.py to Input.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MetaTool/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MetaTool/metatool_format.py to metatool_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/MetaTool/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy/compression.py to compression.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy/Location.py to Location.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy/BaseDB.py to BaseDB.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy/SimpleSeqRecord.py to SimpleSeqRecord.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy/FlatDB.py to FlatDB.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy/BerkeleyDB.py to BerkeleyDB.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Mindy/XPath.py to XPath.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NBRF/nbrf_format.py to nbrf_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NBRF/ValSeq.py to ValSeq.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NBRF/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NBRF/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Ndb/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Training.py to Training.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/StopTraining.py to StopTraining.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/BackPropagation/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/BackPropagation/Layer.py to Layer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/BackPropagation/Network.py to Network.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Gene/Motif.py to Motif.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Gene/Schema.py to Schema.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Gene/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Gene/Pattern.py to Pattern.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NeuralNetwork/Gene/Signature.py to Signature.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Nexus/Nexus.py to Nexus.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Nexus/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Nexus/Trees.py to Trees.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Nexus/Nodes.py to Nodes.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NMR/NOEtools.py to NOEtools.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NMR/xpktools.py to xpktools.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/NMR/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Parsers/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Parsers/spark.py to spark.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway/Rep/Graph.py to Graph.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway/Rep/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway/Rep/MultiGraph.py to MultiGraph.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Pathway/Rep/HashSet.py to HashSet.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/PDBParser.py to PDBParser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/Selection.py to Selection.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/Polypeptide.py to Polypeptide.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/Dice.py to Dice.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/Residue.py to Residue.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/Chain.py to Chain.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/PDBList.py to PDBList.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/NACCESS.py to NACCESS.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/PSEA.py to PSEA.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/DSSP.py to DSSP.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/Model.py to Model.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/Entity.py to Entity.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/Atom.py to Atom.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/Vector.py to Vector.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/Superimposer.py to Superimposer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/HSExposure.py to HSExposure.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/PDBIO.py to PDBIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/Structure.py to Structure.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PDB/mmCIF/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/Async/Local.py to Local.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/Async/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/FDist/Async.py to Async.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/FDist/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/FDist/Controller.py to Controller.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/FDist/Utils.py to Utils.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/GenePop/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/GenePop/Utils.py to Utils.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/Async.py to Async.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/Template.py to Template.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/Controller.py to Controller.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/PopGen/SimCoal/Cache.py to Cache.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Prosite/Prodoc.py to Prodoc.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Prosite/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Prosite/Pattern.py to Pattern.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/Restriction_Dictionary.py to Restriction_Dictionary.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/Restriction.py to Restriction.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/RanaConfig.py to RanaConfig.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/PrintFormat.py to PrintFormat.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/_Update/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/_Update/RestrictionCompiler.py to RestrictionCompiler.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Restriction/_Update/Update.py to Update.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Saf/saf_format.py to saf_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Saf/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Saf/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP/Des.py to Des.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP/Dom.py to Dom.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP/FileIndex.py to FileIndex.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP/Cla.py to Cla.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP/Hie.py to Hie.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP/Raf.py to Raf.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SCOP/Residues.py to Residues.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO/IgIO.py to IgIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO/SwissIO.py to SwissIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO/PirIO.py to PirIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO/FastaIO.py to FastaIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO/InsdcIO.py to InsdcIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO/Interfaces.py to Interfaces.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO/AceIO.py to AceIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO/TabIO.py to TabIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqIO/PhdIO.py to PhdIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils/CheckSum.py to CheckSum.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils/ProtParamData.py to ProtParamData.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils/MeltingTemp.py to MeltingTemp.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils/IsoelectricPoint.py to IsoelectricPoint.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils/CodonUsage.py to CodonUsage.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils/lcc.py to lcc.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils/ProtParam.py to ProtParam.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SeqUtils/CodonUsageIndices.py to CodonUsageIndices.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Sequencing/Phd.py to Phd.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Sequencing/Ace.py to Ace.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Sequencing/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Statistics/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Statistics/lowess.py to lowess.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SubsMat/FreqTable.py to FreqTable.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SubsMat/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SubsMat/MatrixInfo.py to MatrixInfo.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SVDSuperimposer/SVDSuperimposer.py to SVDSuperimposer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SVDSuperimposer/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SwissProt/SProt.py to SProt.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SwissProt/KeyWList.py to KeyWList.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/SwissProt/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/UniGene/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers/SeqRecord/fasta.py to fasta.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers/SeqRecord/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers/SeqRecord/embl.py to embl.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/writers/SeqRecord/empty.py to empty.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Wise/dnal.py to dnal.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Wise/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Wise/psw.py to psw.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/WWW/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Affy/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Affy/CelFile.py to CelFile.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Cluster/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KDTree/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/KDTree/KDTree.py to KDTree.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/BioSQL/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/BioSQL/DBUtils.py to DBUtils.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/BioSQL/Loader.py to Loader.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/BioSQL/BioSeq.py to BioSeq.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/BioSQL/BioSeqDatabase.py to BioSeqDatabase.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/LAX.py to LAX.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/IterParser.py to IterParser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/convert_re.py to convert_re.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/msre_parse.py to msre_parse.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/optimize.py to optimize.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/Dispatch.py to Dispatch.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/RecordReader.py to RecordReader.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/msre_constants.py to msre_constants.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/Parser.py to Parser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/Generate.py to Generate.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/setup.py to setup.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/Expression.py to Expression.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/Time.py to Time.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/Martel/Iterator.py to Iterator.pyc running install_data running install_egg_info Writing /build/buildd/python-biopython-1.49/debian/python2.5-tmp/usr/lib/python2.5/site-packages/biopython-1.49.egg-info chmod 644 debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/EUtils/DTDs/*dtd chmod 644 debian/python2.5-tmp/usr/lib/python2.5/site-packages/Bio/Entrez/DTDs/*dtd for i in `find ./debian/python2.5-tmp/usr/lib/python2.5/site-packages -name "*.py"`; do \ sed -ir "s/^#\!\/usr\/bin\/env python\(2\.[234]\)\?$//" $i; \ sed -ir "s/^#\![ ]*\/usr\/bin\/python[ ]*\(-OO\)\?\(-i\)\?$//" $i; \ rm -f $i\r; \ done dh_movefiles -ppython-biopython \ -ppython-biopython-sql \ -ppython-biopython-martel \ --sourcedir=debian/python2.5-tmp dh_testdir dh_testroot yes | python2.4 setup.py install --root /build/buildd/python-biopython-1.49/debian/python2.4-tmp running install running build running build_py running build_ext running install_lib creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4 creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/Transcribe.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/pairwise2.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/MarkovModel.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/Search.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/EZRetrieve.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/DocSQL.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/mathfns.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/utils.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/StdHandler.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/SeqFeature.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/Translate.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/HotRand.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/MaxEntropy.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/File.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/Seq.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/Std.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/DBXRef.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/distance.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/FilteredReader.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/stringfns.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/ParserSupport.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/Index.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/NetCatch.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/SeqRecord.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/PubMed.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/NaiveBayes.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/ExPASy.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/listfns.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/Writer.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/triefind.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/Decode.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/LogisticRegression.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/kNN.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/PropertyManager.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Align copying build/lib.linux-sparc-2.4/Bio/Align/AlignInfo.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Align copying build/lib.linux-sparc-2.4/Bio/Align/FormatConvert.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Align copying build/lib.linux-sparc-2.4/Bio/Align/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Align copying build/lib.linux-sparc-2.4/Bio/Align/Generic.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Align creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.4/Bio/AlignIO/NexusIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.4/Bio/AlignIO/EmbossIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.4/Bio/AlignIO/ClustalIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.4/Bio/AlignIO/StockholmIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.4/Bio/AlignIO/FastaIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.4/Bio/AlignIO/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.4/Bio/AlignIO/Interfaces.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO copying build/lib.linux-sparc-2.4/Bio/AlignIO/PhylipIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.4/Bio/AlignAce/Motif.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.4/Bio/AlignAce/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.4/Bio/AlignAce/Parser.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.4/Bio/AlignAce/CompareAceStandalone.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.4/Bio/AlignAce/AlignAceStandalone.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.4/Bio/AlignAce/Applications.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce copying build/lib.linux-sparc-2.4/Bio/AlignAce/Scanner.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Alphabet copying build/lib.linux-sparc-2.4/Bio/Alphabet/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Alphabet copying build/lib.linux-sparc-2.4/Bio/Alphabet/IUPAC.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Alphabet copying build/lib.linux-sparc-2.4/Bio/Alphabet/Reduced.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Alphabet creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Application copying build/lib.linux-sparc-2.4/Bio/Application/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Application creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast copying build/lib.linux-sparc-2.4/Bio/Blast/NCBIStandalone.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast copying build/lib.linux-sparc-2.4/Bio/Blast/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast copying build/lib.linux-sparc-2.4/Bio/Blast/NCBIWWW.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast copying build/lib.linux-sparc-2.4/Bio/Blast/NCBIXML.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast copying build/lib.linux-sparc-2.4/Bio/Blast/Applications.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast copying build/lib.linux-sparc-2.4/Bio/Blast/ParseBlastTable.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast copying build/lib.linux-sparc-2.4/Bio/Blast/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/CAPS copying build/lib.linux-sparc-2.4/Bio/CAPS/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/CAPS creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Compass copying build/lib.linux-sparc-2.4/Bio/Compass/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Compass creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Clustalw copying build/lib.linux-sparc-2.4/Bio/Clustalw/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Clustalw creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Crystal copying build/lib.linux-sparc-2.4/Bio/Crystal/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Crystal creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Data copying build/lib.linux-sparc-2.4/Bio/Data/IUPACData.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Data copying build/lib.linux-sparc-2.4/Bio/Data/CodonTable.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Data copying build/lib.linux-sparc-2.4/Bio/Data/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Data creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.4/Bio/Emboss/PrimerSearch.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.4/Bio/Emboss/Primer.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.4/Bio/Emboss/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.4/Bio/Emboss/primer3_format.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.4/Bio/Emboss/Primer3.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.4/Bio/Emboss/Applications.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss copying build/lib.linux-sparc-2.4/Bio/Emboss/primersearch_format.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Encodings copying build/lib.linux-sparc-2.4/Bio/Encodings/IUPACEncoding.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Encodings copying build/lib.linux-sparc-2.4/Bio/Encodings/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Encodings creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez copying build/lib.linux-sparc-2.4/Bio/Entrez/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez copying build/lib.linux-sparc-2.4/Bio/Entrez/Parser.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez copying build/lib.linux-sparc-2.4/Bio/Entrez/SerialSet.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/eSearch_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/ePost_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/taxon.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/pubmed_080101.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/SP_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/eSummary_041029.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/egquery.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/eInfo_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/eSpell.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/eLink_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs copying build/lib.linux-sparc-2.4/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Enzyme copying build/lib.linux-sparc-2.4/Bio/Enzyme/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Enzyme creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/ThinClient.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/ReseekFile.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/Datatypes.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/POM.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/parse.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/Mixins.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/HistoryClient.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/DBIdsClient.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/setup.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/Config.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/dtd2py.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/sourcegen.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils copying build/lib.linux-sparc-2.4/Bio/EUtils/MultiDict.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/eSearch_020511.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/eSummary_020511.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/eLink_020511.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/eInfo_020511.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/ePost_020511.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/LinkOut.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/LinkOut.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/eSearch_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/ePost_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/eSummary_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/eInfo_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs copying build/lib.linux-sparc-2.4/Bio/EUtils/DTDs/eLink_020511.dtd -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Fasta copying build/lib.linux-sparc-2.4/Bio/Fasta/FastaAlign.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Fasta copying build/lib.linux-sparc-2.4/Bio/Fasta/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Fasta creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/FSSP copying build/lib.linux-sparc-2.4/Bio/FSSP/fssp_rec.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/FSSP copying build/lib.linux-sparc-2.4/Bio/FSSP/FSSPTools.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/FSSP copying build/lib.linux-sparc-2.4/Bio/FSSP/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/FSSP creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA copying build/lib.linux-sparc-2.4/Bio/GA/Evolver.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA copying build/lib.linux-sparc-2.4/Bio/GA/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA copying build/lib.linux-sparc-2.4/Bio/GA/Organism.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.4/Bio/GA/Crossover/GeneralPoint.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.4/Bio/GA/Crossover/Point.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.4/Bio/GA/Crossover/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.4/Bio/GA/Crossover/TwoPoint.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.4/Bio/GA/Crossover/General.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover copying build/lib.linux-sparc-2.4/Bio/GA/Crossover/Uniform.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Mutation copying build/lib.linux-sparc-2.4/Bio/GA/Mutation/Simple.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Mutation copying build/lib.linux-sparc-2.4/Bio/GA/Mutation/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Mutation copying build/lib.linux-sparc-2.4/Bio/GA/Mutation/General.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Mutation creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Repair copying build/lib.linux-sparc-2.4/Bio/GA/Repair/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Repair copying build/lib.linux-sparc-2.4/Bio/GA/Repair/Stabilizing.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Repair creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Selection copying build/lib.linux-sparc-2.4/Bio/GA/Selection/Diversity.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Selection copying build/lib.linux-sparc-2.4/Bio/GA/Selection/RouletteWheel.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Selection copying build/lib.linux-sparc-2.4/Bio/GA/Selection/Abstract.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Selection copying build/lib.linux-sparc-2.4/Bio/GA/Selection/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Selection copying build/lib.linux-sparc-2.4/Bio/GA/Selection/Tournament.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Selection creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GenBank copying build/lib.linux-sparc-2.4/Bio/GenBank/utils.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GenBank copying build/lib.linux-sparc-2.4/Bio/GenBank/LocationParser.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GenBank copying build/lib.linux-sparc-2.4/Bio/GenBank/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GenBank copying build/lib.linux-sparc-2.4/Bio/GenBank/Scanner.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GenBank copying build/lib.linux-sparc-2.4/Bio/GenBank/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GenBank creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Geo copying build/lib.linux-sparc-2.4/Bio/Geo/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Geo copying build/lib.linux-sparc-2.4/Bio/Geo/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Geo creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GFF copying build/lib.linux-sparc-2.4/Bio/GFF/easy.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GFF copying build/lib.linux-sparc-2.4/Bio/GFF/GenericTools.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GFF copying build/lib.linux-sparc-2.4/Bio/GFF/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GFF copying build/lib.linux-sparc-2.4/Bio/GFF/binning.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GFF creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Graphics copying build/lib.linux-sparc-2.4/Bio/Graphics/DisplayRepresentation.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Graphics copying build/lib.linux-sparc-2.4/Bio/Graphics/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Graphics copying build/lib.linux-sparc-2.4/Bio/Graphics/Distribution.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Graphics copying build/lib.linux-sparc-2.4/Bio/Graphics/BasicChromosome.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Graphics copying build/lib.linux-sparc-2.4/Bio/Graphics/Comparative.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Graphics creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HMM copying build/lib.linux-sparc-2.4/Bio/HMM/MarkovModel.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HMM copying build/lib.linux-sparc-2.4/Bio/HMM/Utilities.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HMM copying build/lib.linux-sparc-2.4/Bio/HMM/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HMM copying build/lib.linux-sparc-2.4/Bio/HMM/DynamicProgramming.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HMM copying build/lib.linux-sparc-2.4/Bio/HMM/Trainer.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HMM creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/IntelliGenetics copying build/lib.linux-sparc-2.4/Bio/IntelliGenetics/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/IntelliGenetics copying build/lib.linux-sparc-2.4/Bio/IntelliGenetics/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/IntelliGenetics copying build/lib.linux-sparc-2.4/Bio/IntelliGenetics/intelligenetics_format.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/IntelliGenetics creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/InterPro copying build/lib.linux-sparc-2.4/Bio/InterPro/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/InterPro creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG copying build/lib.linux-sparc-2.4/Bio/KEGG/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG/Compound copying build/lib.linux-sparc-2.4/Bio/KEGG/Compound/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG/Compound creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG/Enzyme copying build/lib.linux-sparc-2.4/Bio/KEGG/Enzyme/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG/Enzyme creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG/Map copying build/lib.linux-sparc-2.4/Bio/KEGG/Map/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG/Map creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Medline copying build/lib.linux-sparc-2.4/Bio/Medline/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Medline creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MEME copying build/lib.linux-sparc-2.4/Bio/MEME/Motif.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MEME copying build/lib.linux-sparc-2.4/Bio/MEME/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MEME copying build/lib.linux-sparc-2.4/Bio/MEME/Parser.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MEME creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MetaTool copying build/lib.linux-sparc-2.4/Bio/MetaTool/Input.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MetaTool copying build/lib.linux-sparc-2.4/Bio/MetaTool/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MetaTool copying build/lib.linux-sparc-2.4/Bio/MetaTool/metatool_format.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MetaTool copying build/lib.linux-sparc-2.4/Bio/MetaTool/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MetaTool creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.4/Bio/Mindy/compression.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.4/Bio/Mindy/Location.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.4/Bio/Mindy/BaseDB.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.4/Bio/Mindy/SimpleSeqRecord.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.4/Bio/Mindy/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.4/Bio/Mindy/FlatDB.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.4/Bio/Mindy/BerkeleyDB.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy copying build/lib.linux-sparc-2.4/Bio/Mindy/XPath.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NBRF copying build/lib.linux-sparc-2.4/Bio/NBRF/nbrf_format.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NBRF copying build/lib.linux-sparc-2.4/Bio/NBRF/ValSeq.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NBRF copying build/lib.linux-sparc-2.4/Bio/NBRF/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NBRF copying build/lib.linux-sparc-2.4/Bio/NBRF/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NBRF creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Ndb copying build/lib.linux-sparc-2.4/Bio/Ndb/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Ndb creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork copying build/lib.linux-sparc-2.4/Bio/NeuralNetwork/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork copying build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Training.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork copying build/lib.linux-sparc-2.4/Bio/NeuralNetwork/StopTraining.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-sparc-2.4/Bio/NeuralNetwork/BackPropagation/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-sparc-2.4/Bio/NeuralNetwork/BackPropagation/Layer.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-sparc-2.4/Bio/NeuralNetwork/BackPropagation/Network.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/BackPropagation creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Gene/Motif.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Gene/Schema.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Gene/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Gene/Pattern.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-sparc-2.4/Bio/NeuralNetwork/Gene/Signature.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Gene creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Nexus copying build/lib.linux-sparc-2.4/Bio/Nexus/Nexus.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Nexus copying build/lib.linux-sparc-2.4/Bio/Nexus/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Nexus copying build/lib.linux-sparc-2.4/Bio/Nexus/Trees.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Nexus copying build/lib.linux-sparc-2.4/Bio/Nexus/Nodes.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Nexus copying build/lib.linux-sparc-2.4/Bio/Nexus/cnexus.so -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Nexus creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NMR copying build/lib.linux-sparc-2.4/Bio/NMR/NOEtools.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NMR copying build/lib.linux-sparc-2.4/Bio/NMR/xpktools.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NMR copying build/lib.linux-sparc-2.4/Bio/NMR/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NMR creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Parsers copying build/lib.linux-sparc-2.4/Bio/Parsers/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Parsers copying build/lib.linux-sparc-2.4/Bio/Parsers/spark.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Parsers creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway copying build/lib.linux-sparc-2.4/Bio/Pathway/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway/Rep copying build/lib.linux-sparc-2.4/Bio/Pathway/Rep/Graph.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway/Rep copying build/lib.linux-sparc-2.4/Bio/Pathway/Rep/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway/Rep copying build/lib.linux-sparc-2.4/Bio/Pathway/Rep/MultiGraph.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway/Rep copying build/lib.linux-sparc-2.4/Bio/Pathway/Rep/HashSet.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway/Rep creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/PDBParser.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/Selection.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/Polypeptide.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/StructureBuilder.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/MMCIFParser.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/Dice.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/Residue.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/StructureAlignment.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/Chain.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/PDBExceptions.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/AbstractPropertyMap.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/NeighborSearch.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/PDBList.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/NACCESS.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/FragmentMapper.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/PSEA.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/ResidueDepth.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/DSSP.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/Model.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/Entity.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/Atom.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/Vector.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/Superimposer.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/parse_pdb_header.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/HSExposure.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/PDBIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/MMCIF2Dict.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB copying build/lib.linux-sparc-2.4/Bio/PDB/Structure.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/mmCIF copying build/lib.linux-sparc-2.4/Bio/PDB/mmCIF/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/mmCIF copying build/lib.linux-sparc-2.4/Bio/PDB/mmCIF/MMCIFlex.so -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/mmCIF creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen copying build/lib.linux-sparc-2.4/Bio/PopGen/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/Async copying build/lib.linux-sparc-2.4/Bio/PopGen/Async/Local.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/Async copying build/lib.linux-sparc-2.4/Bio/PopGen/Async/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/Async creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/FDist copying build/lib.linux-sparc-2.4/Bio/PopGen/FDist/Async.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/FDist copying build/lib.linux-sparc-2.4/Bio/PopGen/FDist/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/FDist copying build/lib.linux-sparc-2.4/Bio/PopGen/FDist/Controller.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/FDist copying build/lib.linux-sparc-2.4/Bio/PopGen/FDist/Utils.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/FDist creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/GenePop copying build/lib.linux-sparc-2.4/Bio/PopGen/GenePop/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/GenePop copying build/lib.linux-sparc-2.4/Bio/PopGen/GenePop/Utils.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/GenePop creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/Async.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/Template.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/Controller.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/Cache.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data/island.par -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data/ssm_1d.par -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data/split_ssm_1d.par -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data/simple.par -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data/ssm_2d.par -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data/decline_lambda.par -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data/split_island.par -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data/bottle.par -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data/split_ssm_2d.par -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-sparc-2.4/Bio/PopGen/SimCoal/data/decline_split.par -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/data creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Prosite copying build/lib.linux-sparc-2.4/Bio/Prosite/Prodoc.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Prosite copying build/lib.linux-sparc-2.4/Bio/Prosite/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Prosite copying build/lib.linux-sparc-2.4/Bio/Prosite/Pattern.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Prosite creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction copying build/lib.linux-sparc-2.4/Bio/Restriction/Restriction_Dictionary.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction copying build/lib.linux-sparc-2.4/Bio/Restriction/Restriction.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction copying build/lib.linux-sparc-2.4/Bio/Restriction/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction copying build/lib.linux-sparc-2.4/Bio/Restriction/RanaConfig.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction copying build/lib.linux-sparc-2.4/Bio/Restriction/PrintFormat.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/_Update copying build/lib.linux-sparc-2.4/Bio/Restriction/_Update/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/_Update copying build/lib.linux-sparc-2.4/Bio/Restriction/_Update/RestrictionCompiler.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/_Update copying build/lib.linux-sparc-2.4/Bio/Restriction/_Update/Update.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/_Update copying build/lib.linux-sparc-2.4/Bio/Restriction/DNAUtils.so -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Saf copying build/lib.linux-sparc-2.4/Bio/Saf/saf_format.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Saf copying build/lib.linux-sparc-2.4/Bio/Saf/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Saf copying build/lib.linux-sparc-2.4/Bio/Saf/Record.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Saf creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.4/Bio/SCOP/Des.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.4/Bio/SCOP/Dom.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.4/Bio/SCOP/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.4/Bio/SCOP/FileIndex.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.4/Bio/SCOP/Cla.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.4/Bio/SCOP/Hie.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.4/Bio/SCOP/Raf.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP copying build/lib.linux-sparc-2.4/Bio/SCOP/Residues.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.4/Bio/SeqIO/IgIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.4/Bio/SeqIO/SwissIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.4/Bio/SeqIO/PirIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.4/Bio/SeqIO/FastaIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.4/Bio/SeqIO/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.4/Bio/SeqIO/InsdcIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.4/Bio/SeqIO/Interfaces.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.4/Bio/SeqIO/AceIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.4/Bio/SeqIO/TabIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO copying build/lib.linux-sparc-2.4/Bio/SeqIO/PhdIO.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.4/Bio/SeqUtils/CheckSum.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.4/Bio/SeqUtils/ProtParamData.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.4/Bio/SeqUtils/MeltingTemp.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.4/Bio/SeqUtils/IsoelectricPoint.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.4/Bio/SeqUtils/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.4/Bio/SeqUtils/CodonUsage.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.4/Bio/SeqUtils/lcc.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.4/Bio/SeqUtils/ProtParam.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils copying build/lib.linux-sparc-2.4/Bio/SeqUtils/CodonUsageIndices.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Sequencing copying build/lib.linux-sparc-2.4/Bio/Sequencing/Phd.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Sequencing copying build/lib.linux-sparc-2.4/Bio/Sequencing/Ace.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Sequencing copying build/lib.linux-sparc-2.4/Bio/Sequencing/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Sequencing creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Statistics copying build/lib.linux-sparc-2.4/Bio/Statistics/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Statistics copying build/lib.linux-sparc-2.4/Bio/Statistics/lowess.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Statistics creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SubsMat copying build/lib.linux-sparc-2.4/Bio/SubsMat/FreqTable.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SubsMat copying build/lib.linux-sparc-2.4/Bio/SubsMat/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SubsMat copying build/lib.linux-sparc-2.4/Bio/SubsMat/MatrixInfo.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SubsMat creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SVDSuperimposer copying build/lib.linux-sparc-2.4/Bio/SVDSuperimposer/SVDSuperimposer.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SVDSuperimposer copying build/lib.linux-sparc-2.4/Bio/SVDSuperimposer/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SVDSuperimposer creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SwissProt copying build/lib.linux-sparc-2.4/Bio/SwissProt/SProt.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SwissProt copying build/lib.linux-sparc-2.4/Bio/SwissProt/KeyWList.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SwissProt copying build/lib.linux-sparc-2.4/Bio/SwissProt/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SwissProt creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/UniGene copying build/lib.linux-sparc-2.4/Bio/UniGene/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/UniGene creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers copying build/lib.linux-sparc-2.4/Bio/writers/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers/SeqRecord copying build/lib.linux-sparc-2.4/Bio/writers/SeqRecord/fasta.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers/SeqRecord copying build/lib.linux-sparc-2.4/Bio/writers/SeqRecord/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers/SeqRecord copying build/lib.linux-sparc-2.4/Bio/writers/SeqRecord/embl.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers/SeqRecord copying build/lib.linux-sparc-2.4/Bio/writers/SeqRecord/empty.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers/SeqRecord creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Wise copying build/lib.linux-sparc-2.4/Bio/Wise/dnal.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Wise copying build/lib.linux-sparc-2.4/Bio/Wise/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Wise copying build/lib.linux-sparc-2.4/Bio/Wise/psw.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Wise creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/WWW copying build/lib.linux-sparc-2.4/Bio/WWW/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/WWW creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Affy copying build/lib.linux-sparc-2.4/Bio/Affy/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Affy copying build/lib.linux-sparc-2.4/Bio/Affy/CelFile.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Affy creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Cluster copying build/lib.linux-sparc-2.4/Bio/Cluster/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Cluster copying build/lib.linux-sparc-2.4/Bio/Cluster/cluster.so -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Cluster creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KDTree copying build/lib.linux-sparc-2.4/Bio/KDTree/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KDTree copying build/lib.linux-sparc-2.4/Bio/KDTree/KDTree.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KDTree copying build/lib.linux-sparc-2.4/Bio/KDTree/_CKDTree.so -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KDTree copying build/lib.linux-sparc-2.4/Bio/clistfns.so -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/cmathfns.so -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/cstringfns.so -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/cpairwise2.so -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/trie.so -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio copying build/lib.linux-sparc-2.4/Bio/cMarkovModel.so -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/BioSQL copying build/lib.linux-sparc-2.4/BioSQL/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/BioSQL copying build/lib.linux-sparc-2.4/BioSQL/DBUtils.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/BioSQL copying build/lib.linux-sparc-2.4/BioSQL/Loader.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/BioSQL copying build/lib.linux-sparc-2.4/BioSQL/BioSeq.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/BioSQL copying build/lib.linux-sparc-2.4/BioSQL/BioSeqDatabase.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/BioSQL creating /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/LAX.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/IterParser.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/convert_re.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/msre_parse.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/optimize.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/Dispatch.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/RecordReader.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/msre_constants.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/__init__.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/Parser.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/Generate.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/setup.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/Expression.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/Time.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel copying build/lib.linux-sparc-2.4/Martel/Iterator.py -> /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Transcribe.py to Transcribe.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/pairwise2.py to pairwise2.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MarkovModel.py to MarkovModel.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Search.py to Search.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EZRetrieve.py to EZRetrieve.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/DocSQL.py to DocSQL.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/mathfns.py to mathfns.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/utils.py to utils.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/StdHandler.py to StdHandler.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqFeature.py to SeqFeature.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Translate.py to Translate.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HotRand.py to HotRand.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MaxEntropy.py to MaxEntropy.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/File.py to File.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Seq.py to Seq.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Std.py to Std.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/DBXRef.py to DBXRef.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/distance.py to distance.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/FilteredReader.py to FilteredReader.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/stringfns.py to stringfns.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/ParserSupport.py to ParserSupport.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Index.py to Index.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NetCatch.py to NetCatch.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqRecord.py to SeqRecord.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PubMed.py to PubMed.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NaiveBayes.py to NaiveBayes.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/ExPASy.py to ExPASy.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/listfns.py to listfns.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Writer.py to Writer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/triefind.py to triefind.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Decode.py to Decode.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/LogisticRegression.py to LogisticRegression.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/kNN.py to kNN.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PropertyManager.py to PropertyManager.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Align/AlignInfo.py to AlignInfo.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Align/FormatConvert.py to FormatConvert.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Align/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Align/Generic.py to Generic.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO/NexusIO.py to NexusIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO/EmbossIO.py to EmbossIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO/ClustalIO.py to ClustalIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO/StockholmIO.py to StockholmIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO/FastaIO.py to FastaIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO/Interfaces.py to Interfaces.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignIO/PhylipIO.py to PhylipIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce/Motif.py to Motif.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce/Parser.py to Parser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce/CompareAceStandalone.py to CompareAceStandalone.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce/AlignAceStandalone.py to AlignAceStandalone.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce/Applications.py to Applications.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/AlignAce/Scanner.py to Scanner.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Alphabet/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Alphabet/IUPAC.py to IUPAC.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Alphabet/Reduced.py to Reduced.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Application/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast/NCBIStandalone.py to NCBIStandalone.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast/NCBIWWW.py to NCBIWWW.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast/NCBIXML.py to NCBIXML.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast/Applications.py to Applications.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast/ParseBlastTable.py to ParseBlastTable.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Blast/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/CAPS/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Compass/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Clustalw/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Crystal/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Data/IUPACData.py to IUPACData.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Data/CodonTable.py to CodonTable.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Data/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss/Primer.py to Primer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss/primer3_format.py to primer3_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss/Primer3.py to Primer3.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss/Applications.py to Applications.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Emboss/primersearch_format.py to primersearch_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Encodings/IUPACEncoding.py to IUPACEncoding.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Encodings/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/Parser.py to Parser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/SerialSet.py to SerialSet.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Enzyme/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/ThinClient.py to ThinClient.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/ReseekFile.py to ReseekFile.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/Datatypes.py to Datatypes.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/POM.py to POM.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/parse.py to parse.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/Mixins.py to Mixins.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/HistoryClient.py to HistoryClient.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DBIdsClient.py to DBIdsClient.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/setup.py to setup.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/Config.py to Config.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/dtd2py.py to dtd2py.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/sourcegen.py to sourcegen.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/MultiDict.py to MultiDict.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs/eSearch_020511.py to eSearch_020511.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs/eSummary_020511.py to eSummary_020511.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs/eLink_020511.py to eLink_020511.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs/eInfo_020511.py to eInfo_020511.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs/ePost_020511.py to ePost_020511.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs/LinkOut.py to LinkOut.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Fasta/FastaAlign.py to FastaAlign.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Fasta/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/FSSP/fssp_rec.py to fssp_rec.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/FSSP/FSSPTools.py to FSSPTools.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/FSSP/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Evolver.py to Evolver.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Organism.py to Organism.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover/GeneralPoint.py to GeneralPoint.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover/Point.py to Point.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover/TwoPoint.py to TwoPoint.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover/General.py to General.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Crossover/Uniform.py to Uniform.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Mutation/Simple.py to Simple.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Mutation/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Mutation/General.py to General.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Repair/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Repair/Stabilizing.py to Stabilizing.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Selection/Diversity.py to Diversity.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Selection/RouletteWheel.py to RouletteWheel.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Selection/Abstract.py to Abstract.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Selection/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GA/Selection/Tournament.py to Tournament.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GenBank/utils.py to utils.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GenBank/LocationParser.py to LocationParser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GenBank/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GenBank/Scanner.py to Scanner.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GenBank/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Geo/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Geo/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GFF/easy.py to easy.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GFF/GenericTools.py to GenericTools.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GFF/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/GFF/binning.py to binning.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Graphics/DisplayRepresentation.py to DisplayRepresentation.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Graphics/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Graphics/Distribution.py to Distribution.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Graphics/BasicChromosome.py to BasicChromosome.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Graphics/Comparative.py to Comparative.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HMM/MarkovModel.py to MarkovModel.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HMM/Utilities.py to Utilities.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HMM/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/HMM/Trainer.py to Trainer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/IntelliGenetics/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/IntelliGenetics/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/IntelliGenetics/intelligenetics_format.py to intelligenetics_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/InterPro/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG/Compound/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG/Enzyme/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KEGG/Map/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Medline/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MEME/Motif.py to Motif.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MEME/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MEME/Parser.py to Parser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MetaTool/Input.py to Input.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MetaTool/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MetaTool/metatool_format.py to metatool_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/MetaTool/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy/compression.py to compression.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy/Location.py to Location.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy/BaseDB.py to BaseDB.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy/SimpleSeqRecord.py to SimpleSeqRecord.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy/FlatDB.py to FlatDB.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy/BerkeleyDB.py to BerkeleyDB.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Mindy/XPath.py to XPath.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NBRF/nbrf_format.py to nbrf_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NBRF/ValSeq.py to ValSeq.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NBRF/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NBRF/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Ndb/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Training.py to Training.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/StopTraining.py to StopTraining.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/BackPropagation/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/BackPropagation/Layer.py to Layer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/BackPropagation/Network.py to Network.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Gene/Motif.py to Motif.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Gene/Schema.py to Schema.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Gene/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Gene/Pattern.py to Pattern.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NeuralNetwork/Gene/Signature.py to Signature.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Nexus/Nexus.py to Nexus.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Nexus/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Nexus/Trees.py to Trees.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Nexus/Nodes.py to Nodes.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NMR/NOEtools.py to NOEtools.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NMR/xpktools.py to xpktools.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/NMR/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Parsers/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Parsers/spark.py to spark.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway/Rep/Graph.py to Graph.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway/Rep/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway/Rep/MultiGraph.py to MultiGraph.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Pathway/Rep/HashSet.py to HashSet.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/PDBParser.py to PDBParser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/Selection.py to Selection.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/Polypeptide.py to Polypeptide.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/Dice.py to Dice.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/Residue.py to Residue.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/Chain.py to Chain.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/PDBList.py to PDBList.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/NACCESS.py to NACCESS.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/PSEA.py to PSEA.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/DSSP.py to DSSP.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/Model.py to Model.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/Entity.py to Entity.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/Atom.py to Atom.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/Vector.py to Vector.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/Superimposer.py to Superimposer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/HSExposure.py to HSExposure.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/PDBIO.py to PDBIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/Structure.py to Structure.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PDB/mmCIF/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/Async/Local.py to Local.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/Async/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/FDist/Async.py to Async.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/FDist/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/FDist/Controller.py to Controller.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/FDist/Utils.py to Utils.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/GenePop/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/GenePop/Utils.py to Utils.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/Async.py to Async.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/Template.py to Template.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/Controller.py to Controller.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/PopGen/SimCoal/Cache.py to Cache.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Prosite/Prodoc.py to Prodoc.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Prosite/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Prosite/Pattern.py to Pattern.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/Restriction_Dictionary.py to Restriction_Dictionary.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/Restriction.py to Restriction.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/RanaConfig.py to RanaConfig.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/PrintFormat.py to PrintFormat.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/_Update/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/_Update/RestrictionCompiler.py to RestrictionCompiler.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Restriction/_Update/Update.py to Update.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Saf/saf_format.py to saf_format.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Saf/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Saf/Record.py to Record.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP/Des.py to Des.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP/Dom.py to Dom.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP/FileIndex.py to FileIndex.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP/Cla.py to Cla.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP/Hie.py to Hie.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP/Raf.py to Raf.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SCOP/Residues.py to Residues.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO/IgIO.py to IgIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO/SwissIO.py to SwissIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO/PirIO.py to PirIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO/FastaIO.py to FastaIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO/InsdcIO.py to InsdcIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO/Interfaces.py to Interfaces.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO/AceIO.py to AceIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO/TabIO.py to TabIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqIO/PhdIO.py to PhdIO.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils/CheckSum.py to CheckSum.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils/ProtParamData.py to ProtParamData.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils/MeltingTemp.py to MeltingTemp.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils/IsoelectricPoint.py to IsoelectricPoint.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils/CodonUsage.py to CodonUsage.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils/lcc.py to lcc.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils/ProtParam.py to ProtParam.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SeqUtils/CodonUsageIndices.py to CodonUsageIndices.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Sequencing/Phd.py to Phd.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Sequencing/Ace.py to Ace.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Sequencing/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Statistics/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Statistics/lowess.py to lowess.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SubsMat/FreqTable.py to FreqTable.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SubsMat/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SubsMat/MatrixInfo.py to MatrixInfo.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SVDSuperimposer/SVDSuperimposer.py to SVDSuperimposer.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SVDSuperimposer/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SwissProt/SProt.py to SProt.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SwissProt/KeyWList.py to KeyWList.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/SwissProt/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/UniGene/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers/SeqRecord/fasta.py to fasta.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers/SeqRecord/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers/SeqRecord/embl.py to embl.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/writers/SeqRecord/empty.py to empty.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Wise/dnal.py to dnal.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Wise/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Wise/psw.py to psw.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/WWW/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Affy/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Affy/CelFile.py to CelFile.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Cluster/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KDTree/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/KDTree/KDTree.py to KDTree.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/BioSQL/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/BioSQL/DBUtils.py to DBUtils.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/BioSQL/Loader.py to Loader.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/BioSQL/BioSeq.py to BioSeq.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/BioSQL/BioSeqDatabase.py to BioSeqDatabase.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/LAX.py to LAX.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/IterParser.py to IterParser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/convert_re.py to convert_re.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/msre_parse.py to msre_parse.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/optimize.py to optimize.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/Dispatch.py to Dispatch.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/RecordReader.py to RecordReader.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/msre_constants.py to msre_constants.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/__init__.py to __init__.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/Parser.py to Parser.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/Generate.py to Generate.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/setup.py to setup.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/Expression.py to Expression.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/Time.py to Time.pyc byte-compiling /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/Martel/Iterator.py to Iterator.pyc running install_data running install_egg_info Writing /build/buildd/python-biopython-1.49/debian/python2.4-tmp/usr/lib/python2.4/site-packages/biopython-1.49.egg-info chmod 644 debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/EUtils/DTDs/*dtd chmod 644 debian/python2.4-tmp/usr/lib/python2.4/site-packages/Bio/Entrez/DTDs/*dtd for i in `find ./debian/python2.4-tmp/usr/lib/python2.4/site-packages -name "*.py"`; do \ sed -ir "s/^#\!\/usr\/bin\/env python\(2\.[234]\)\?$//" $i; \ sed -ir "s/^#\![ ]*\/usr\/bin\/python[ ]*\(-OO\)\?\(-i\)\?$//" $i; \ rm -f $i\r; \ done dh_movefiles -ppython-biopython \ -ppython-biopython-sql \ -ppython-biopython-martel \ --sourcedir=debian/python2.4-tmp dh_testdir dh_testroot dh_installdocs -a dh_installchangelogs -a dh_fixperms -a dh_compress -a dh_strip -a dh_strip debug symbol extraction: all non-arch-all packages for this build platform sparc: python-biopython dh_strip debug symbol extraction: packages to act on: python-biopython dh_strip debug symbol extraction: ignored packages: dpkg-gencontrol: warning: unknown substitution variable ${python:Versions} pkgstriptranslations: processing control file: ./debian/python-biopython-dbgsym/DEBIAN/control, package python-biopython-dbgsym, directory ./debian/python-biopython-dbgsym pkgstriptranslations: python-biopython-dbgsym does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `/build/buildd/python-biopython-1.49/debian/python-biopython-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `python-biopython-dbgsym' in `../python-biopython-dbgsym_1.49-1_sparc.ddeb'. dh_pysupport -a dh_shlibdeps -a dpkg-shlibdeps: warning: dependency on libpthread.so.0 could be avoided if "debian/python-biopython/usr/lib/python-support/python-biopython/python2.5/Bio/trie.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.4/Bio/trie.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.5/Bio/Nexus/cnexus.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.5/Bio/Cluster/cluster.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.5/Bio/cpairwise2.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.5/Bio/PDB/mmCIF/MMCIFlex.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.4/Bio/KDTree/_CKDTree.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.5/Bio/cstringfns.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.4/Bio/clistfns.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.4/Bio/Cluster/cluster.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.5/Bio/clistfns.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.5/Bio/KDTree/_CKDTree.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.4/Bio/cMarkovModel.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.4/Bio/cmathfns.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.4/Bio/Restriction/DNAUtils.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.5/Bio/cMarkovModel.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.4/Bio/cpairwise2.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.5/Bio/Restriction/DNAUtils.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.4/Bio/Nexus/cnexus.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.5/Bio/cmathfns.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.4/Bio/cstringfns.so debian/python-biopython/usr/lib/python-support/python-biopython/python2.4/Bio/PDB/mmCIF/MMCIFlex.so" were not uselessly linked against it (they use none of its symbols). dh_gencontrol -a dh_md5sums -a dh_installdeb -a dh_builddeb -a pkgstriptranslations: processing control file: ./debian/python-biopython/DEBIAN/control, package python-biopython, directory ./debian/python-biopython pkgstriptranslations: python-biopython does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `debian/python-biopython/DEBIAN/control' contains user-defined field `Original-Maintainer' warning, `debian/python-biopython/DEBIAN/control' contains user-defined field `Python-Version' dpkg-deb: ignoring 2 warnings about the control file(s) dpkg-deb: building package `python-biopython' in `../python-biopython_1.49-1_sparc.deb'. dpkg-genchanges -B -mUbuntu/sparc Build Daemon >../python-biopython_1.49-1_sparc.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20090125-0226 Publishing debug debs. chroot-autobuild/build/buildd/python-biopython_1.49-1_sparc.deb: new debian package, version 2.0. size 947844 bytes: control archive= 12885 bytes. 1399 bytes, 29 lines control 41598 bytes, 409 lines md5sums 186 bytes, 7 lines * postinst #!/bin/sh 189 bytes, 7 lines * prerm #!/bin/sh Package: python-biopython Version: 1.49-1 Architecture: sparc Maintainer: Ubuntu MOTU Developers Original-Maintainer: Debian-Med Packaging Team Installed-Size: 5364 Depends: python (<< 2.6), python (>= 2.4), python-support (>= 0.7.1), libc6 (>= 2.6), python-numpy, python-biopython-martel (= 1.49-1), python-reportlab, python-egenix-mxtexttools Recommends: python-biopython-doc (= 1.49-1) Suggests: python-tk, wise Conflicts: python2.3-biopython (<< 1.42-1), python2.4-biopython (<< 1.42-1) Replaces: python2.3-biopython (<< 1.42-1), python2.4-biopython (<< 1.42-1) Provides: python2.4-biopython, python2.5-biopython Section: python Priority: optional Homepage: http://biopython.org Description: Python library for bioinformatics The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. . It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. We work along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project. 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Daemon Changed-By: Charles Plessy Description: python-biopython - Python library for bioinformatics python-biopython-doc - Documentation for the Biopython library python-biopython-martel - Flat file parser for the Biopython library python-biopython-sql - SQL support for the Biopython library Closes: 478457 Changes: python-biopython (1.49-1) unstable; urgency=low . * New upstream release. - uses NumPy rather than its precursor Numeric (Closes: #478457) - Martel, Bio.Mindy, Bio.MetaTool, Bio.EUtils, Bio.Saf, Bio.NBRF, and Bio.IntelliGenetics are deprecated. - Bio.PubMed and the online code in Bio.GenBank are now considered obsolete and will be deprecated in a future release. - Bio.Fasta is also considered to be obsolete and will eventually be deprecated. * debian/control: - added myself as Uploader. - depends on python-numpy instead of python-numeric-ext. - moved python-martel to oldlibs section, priority extra as it is deprecated, and indicate this in the description. - build-depend on python-mysqldb and wise for the tests after building. * Use Debhelper 7 (debian/co{ntrol,mpat}). * debian/copyright: added myself to the Hall of Fame and updated to latest draft of the machine-readable format. * debian/watch: makes beta versions lower by prepending a tilde between numbers and letters (1.49b -> 1.49~b). * mmCIF support enabled: - debian/patches/01-enable-mmCIF.patch: as the name indicates ;) - debian/rules: patch and unpatch through /usr/share/quilt/quilt.make. - debian/control: build-depends on quilt. * debian/python-biopython-doc.doc-base: corrected index name that was changed upstream. * debian/patches/02-fix-wise-test.patch: prevents tests failing with Debian's version of Wise. * debian/rules: perform tests after build. Checksums-Sha1: 549f01f69721ff0050dda2702d49cd4adbeaf691 947844 python-biopython_1.49-1_sparc.deb Checksums-Sha256: 1e4db06d42b286b22edffa6961406fbc0310e4c4b0cfbec3653cb103583d8048 947844 python-biopython_1.49-1_sparc.deb Files: 8e210505794aa582c07cfd960cf2b414 947844 python optional python-biopython_1.49-1_sparc.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/python-biopython-1.49 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --root=/home/buildd/build-847080-1962195/chroot-autobuild --purge groff-base python-egenix-mxtexttools libglib2.0-0 mime-support m4 libdb4.2 readline-common gettext file python2.5 wise libmysqlclient15off po-debconf python-numpy quilt libcroco3 libglib1.2ldbl python-support libxml2 python-all-dev python-all python-dev man-db libssl0.9.8 intltool-debian python-reportlab python2.4 html2text diffstat python2.4-dev gettext-base flex python-egenix-mxtools debhelper python libmagic1 libreadline5 python-central python2.4-minimal libsqlite3-0 python2.5-dev bsdmainutils python-mysqldb libncursesw5 mysql-common (Reading database ... 14761 files and directories currently installed.) 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