https://launchpad.net/ubuntu/+source/python-cogent/2021.5.7a+dfsg-2/+build/22303528 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-048 4.15.0-161-generic #169-Ubuntu SMP Fri Oct 15 13:41:12 UTC 2021 aarch64 Buildd toolchain package versions: launchpad-buildd_203~505~ubuntu18.04.1 python3-lpbuildd_203~505~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.9 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 31 Oct 13:05:34 ntpdate[1721]: adjust time server 10.211.37.1 offset -0.008054 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=jammy --arch=arm64 PACKAGEBUILD-22303528 --image-type chroot /home/buildd/filecache-default/d7d0133902b8cc1df688a841d4b96e994eeac2e0 Creating target for build PACKAGEBUILD-22303528 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=jammy --arch=arm64 PACKAGEBUILD-22303528 Starting target for build PACKAGEBUILD-22303528 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=jammy --arch=arm64 PACKAGEBUILD-22303528 'deb http://ftpmaster.internal/ubuntu jammy main universe' 'deb http://ftpmaster.internal/ubuntu jammy-security main universe' 'deb http://ftpmaster.internal/ubuntu jammy-updates main universe' 'deb http://ftpmaster.internal/ubuntu jammy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-22303528 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=jammy --arch=arm64 PACKAGEBUILD-22303528 Updating target for build PACKAGEBUILD-22303528 Get:1 http://ftpmaster.internal/ubuntu jammy InRelease [254 kB] Get:2 http://ftpmaster.internal/ubuntu jammy-security InRelease [74.9 kB] Get:3 http://ftpmaster.internal/ubuntu jammy-updates InRelease [74.9 kB] Get:4 http://ftpmaster.internal/ubuntu jammy-proposed InRelease [105 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main arm64 Packages [1371 kB] Get:6 http://ftpmaster.internal/ubuntu jammy/main Translation-en [512 kB] Get:7 http://ftpmaster.internal/ubuntu jammy/universe arm64 Packages [12.9 MB] Get:8 http://ftpmaster.internal/ubuntu jammy/universe Translation-en [5509 kB] Get:9 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 Packages [366 kB] Get:10 http://ftpmaster.internal/ubuntu jammy-proposed/main Translation-en [126 kB] Get:11 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 Packages [1842 kB] Get:12 http://ftpmaster.internal/ubuntu jammy-proposed/universe Translation-en [877 kB] Fetched 24.0 MB in 10s (2348 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt bsdutils ca-certificates cpp-11 dash debconf debianutils g++-11 gcc-11 gcc-11-base grep libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libattr1 libblkid1 libcc1-0 libgcc-11-dev libgcc-s1 libgdbm-compat4 libgdbm6 libgomp1 libgpg-error0 libgssapi-krb5-2 libhwasan0 libidn2-0 libisl23 libitm1 libk5crypto3 libkrb5-3 libkrb5support0 liblsan0 libmount1 libmpc3 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libseccomp2 libselinux1 libsmartcols1 libsqlite3-0 libstdc++-11-dev libstdc++6 libtasn1-6 libtinfo6 libtsan0 libubsan1 libuuid1 libzstd1 lockfile-progs make mount ncurses-base ncurses-bin sensible-utils tzdata usrmerge util-linux 63 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 183 MB of archives. After this operation, 105 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 bsdutils arm64 1:2.37.2-4ubuntu1 [84.5 kB] Get:2 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 debianutils arm64 5.5-1 [77.5 kB] Get:3 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 debconf all 1.5.79 [126 kB] Get:4 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 dash arm64 0.5.11+git20210903+057cd650a4ed-1 [92.1 kB] Get:5 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 grep arm64 3.7-1 [152 kB] Get:6 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libncursesw6 arm64 6.2+20210905-1 [142 kB] Get:7 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libncurses6 arm64 6.2+20210905-1 [108 kB] Get:8 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libtinfo6 arm64 6.2+20210905-1 [104 kB] Get:9 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 ncurses-bin arm64 6.2+20210905-1 [180 kB] Get:10 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libblkid1 arm64 2.37.2-4ubuntu1 [103 kB] Get:11 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libselinux1 arm64 3.1-3build3 [74.1 kB] Get:12 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libmount1 arm64 2.37.2-4ubuntu1 [120 kB] Get:13 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 util-linux arm64 2.37.2-4ubuntu1 [1059 kB] Get:14 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 ncurses-base all 6.2+20210905-1 [19.9 kB] Get:15 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libcc1-0 arm64 11.2.0-10ubuntu1 [54.2 kB] Get:16 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 gcc-11-base arm64 11.2.0-10ubuntu1 [21.0 kB] Get:17 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libgcc-s1 arm64 11.2.0-10ubuntu1 [39.3 kB] Get:18 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libgomp1 arm64 11.2.0-10ubuntu1 [115 kB] Get:19 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libitm1 arm64 11.2.0-10ubuntu1 [28.4 kB] Get:20 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libatomic1 arm64 11.2.0-10ubuntu1 [10.9 kB] Get:21 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libasan6 arm64 11.2.0-10ubuntu1 [2228 kB] Get:22 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 liblsan0 arm64 11.2.0-10ubuntu1 [942 kB] Get:23 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libtsan0 arm64 11.2.0-10ubuntu1 [2233 kB] Get:24 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libubsan1 arm64 11.2.0-10ubuntu1 [908 kB] Get:25 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libhwasan0 arm64 11.2.0-10ubuntu1 [1010 kB] Get:26 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 g++-11 arm64 11.2.0-10ubuntu1 [54.4 MB] Get:27 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libstdc++-11-dev arm64 11.2.0-10ubuntu1 [2064 kB] Get:28 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libgcc-11-dev arm64 11.2.0-10ubuntu1 [1149 kB] Get:29 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 gcc-11 arm64 11.2.0-10ubuntu1 [58.3 MB] Get:30 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 cpp-11 arm64 11.2.0-10ubuntu1 [50.0 MB] Get:31 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libstdc++6 arm64 11.2.0-10ubuntu1 [623 kB] Get:32 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libisl23 arm64 0.24-2 [690 kB] Get:33 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libmpc3 arm64 1.2.1-1 [48.1 kB] Get:34 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libzstd1 arm64 1.4.8+dfsg-3 [311 kB] Get:35 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libapt-pkg6.0 arm64 2.3.11 [864 kB] Get:36 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libseccomp2 arm64 2.5.1-1ubuntu2 [47.8 kB] Get:37 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 apt arm64 2.3.11 [1356 kB] Get:38 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libpam0g arm64 1.4.0-10ubuntu1 [61.2 kB] Get:39 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libpam-modules-bin arm64 1.4.0-10ubuntu1 [38.4 kB] Get:40 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libpam-modules arm64 1.4.0-10ubuntu1 [277 kB] Get:41 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 mount arm64 2.37.2-4ubuntu1 [113 kB] Get:42 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libattr1 arm64 1:2.5.1-1 [13.3 kB] Get:43 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libgpg-error0 arm64 1.42-3 [67.7 kB] Get:44 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libk5crypto3 arm64 1.18.3-7 [91.5 kB] Get:45 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libkrb5support0 arm64 1.18.3-7 [32.3 kB] Get:46 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libkrb5-3 arm64 1.18.3-7 [357 kB] Get:47 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libgssapi-krb5-2 arm64 1.18.3-7 [141 kB] Get:48 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libpam-runtime all 1.4.0-10ubuntu1 [40.2 kB] Get:49 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libsmartcols1 arm64 2.37.2-4ubuntu1 [49.6 kB] Get:50 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libuuid1 arm64 2.37.2-4ubuntu1 [23.8 kB] Get:51 http://ftpmaster.internal/ubuntu jammy/main arm64 libidn2-0 arm64 2.3.2-2 [67.1 kB] Get:52 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libp11-kit0 arm64 0.24.0-5 [231 kB] Get:53 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libtasn1-6 arm64 4.17.0-2 [42.8 kB] Get:54 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 sensible-utils all 0.0.17 [20.1 kB] Get:55 http://ftpmaster.internal/ubuntu jammy/main arm64 usrmerge all 25ubuntu2 [54.7 kB] Get:56 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 ca-certificates all 20211016 [148 kB] Get:57 http://ftpmaster.internal/ubuntu jammy/main arm64 libapparmor1 arm64 3.0.3-0ubuntu2 [37.4 kB] Get:58 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libsqlite3-0 arm64 3.36.0-2 [638 kB] Get:59 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 tzdata all 2021e-1ubuntu1 [343 kB] Get:60 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libgdbm6 arm64 1.22-1 [35.1 kB] Get:61 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libgdbm-compat4 arm64 1.22-1 [6370 B] Get:62 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 lockfile-progs arm64 0.1.19 [9778 B] Get:63 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 make arm64 4.3-4ubuntu2 [176 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 183 MB in 21s (8775 kB/s) (Reading database ... 13240 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.37.2-4ubuntu1_arm64.deb ... Unpacking bsdutils (1:2.37.2-4ubuntu1) over (1:2.36.1-8ubuntu1) ... Setting up bsdutils (1:2.37.2-4ubuntu1) ... (Reading database ... 13240 files and directories currently installed.) Preparing to unpack .../debianutils_5.5-1_arm64.deb ... Unpacking debianutils (5.5-1) over (4.11.2build1) ... Setting up debianutils (5.5-1) ... update-alternatives: using /usr/bin/which.debianutils to provide /usr/bin/which (which) in auto mode (Reading database ... 13235 files and directories currently installed.) Preparing to unpack .../debconf_1.5.79_all.deb ... Unpacking debconf (1.5.79) over (1.5.77) ... Setting up debconf (1.5.79) ... (Reading database ... 13234 files and directories currently installed.) Preparing to unpack .../dash_0.5.11+git20210903+057cd650a4ed-1_arm64.deb ... Unpacking dash (0.5.11+git20210903+057cd650a4ed-1) over (0.5.11+git20210120+802ebd4-1build1) ... Setting up dash (0.5.11+git20210903+057cd650a4ed-1) ... 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RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-22303528 arm64 jammy-proposed -c chroot:build-PACKAGEBUILD-22303528 --arch=arm64 --dist=jammy-proposed --nolog python-cogent_2021.5.7a+dfsg-2.dsc Initiating build PACKAGEBUILD-22303528 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-161-generic #169-Ubuntu SMP Fri Oct 15 13:41:12 UTC 2021 aarch64 sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-arm64-048.buildd +==============================================================================+ | python-cogent 2021.5.7a+dfsg-2 (arm64) Sun, 31 Oct 2021 13:06:56 +0000 | +==============================================================================+ Package: python-cogent Version: 2021.5.7a+dfsg-2 Source Version: 2021.5.7a+dfsg-2 Distribution: jammy-proposed Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-22303528/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- python-cogent_2021.5.7a+dfsg-2.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/python-cogent-SdihQ6/python-cogent-2021.5.7a+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/python-cogent-SdihQ6' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-rYe5dP/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-rYe5dP/apt_archive ./ InRelease Get:2 copy:/<>/resolver-rYe5dP/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-rYe5dP/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-rYe5dP/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-rYe5dP/apt_archive ./ Packages [431 B] Fetched 1737 B in 0s (49.0 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 652 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-rYe5dP/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [652 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 652 B in 0s (49.1 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 13239 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-matplotlib, python3-numba, python3-numpy, python3-pandas, python3-scitrack, python3-tqdm, python3-tinydb, python3-setuptools, python3-sphinx, python3-numpydoc, python3-nbsphinx, python3-sphinx-bootstrap-theme, python3-sphinx-gallery, python3-sphinxcontrib.bibtex, python3-pytest, cython3, pandoc Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-matplotlib, python3-numba, python3-numpy, python3-pandas, python3-scitrack, python3-tqdm, python3-tinydb, python3-setuptools, python3-sphinx, python3-numpydoc, python3-nbsphinx, python3-sphinx-bootstrap-theme, python3-sphinx-gallery, python3-sphinxcontrib.bibtex, python3-pytest, cython3, pandoc dpkg-deb: building package 'sbuild-build-depends-python-cogent-dummy' in '/<>/resolver-rYe5dP/apt_archive/sbuild-build-depends-python-cogent-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-python-cogent-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-rYe5dP/apt_archive ./ InRelease Get:2 copy:/<>/resolver-rYe5dP/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-rYe5dP/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-rYe5dP/apt_archive ./ Sources [627 B] Get:5 copy:/<>/resolver-rYe5dP/apt_archive ./ Packages [701 B] Fetched 2291 B in 0s (68.6 kB/s) Reading package lists... Reading package lists... Install python-cogent build dependencies (apt-based resolver) ------------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binfmt-support black bsdextrautils cython3 debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-lyx gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbrotli1 libbsd0 libcmark-gfm-extensions0 libcmark-gfm0 libdebhelper-perl libdeflate0 libdw1 libedit2 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libicu67 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 libllvm9 libmagic-mgc libmagic1 libmd0 libmpdec3 libopenjp2-7 libpfm4 libpipeline1 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal libpython3.10-stdlib libpython3.9 libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib libraqm0 libsigsegv2 libsub-override-perl libtbb2 libtiff5 libtool libuchardet0 libwebp6 libwebpdemux2 libwebpmux3 libxau6 libxcb1 libxdmcp6 libxml2 libyaml-0-2 llvm-9 llvm-9-runtime m4 mailcap man-db media-types mime-support pandoc pandoc-data po-debconf python-babel-localedata python-matplotlib-data python-pip-whl python3 python3-alabaster python3-all python3-all-dev python3-appdirs python3-attr python3-babel python3-bleach python3-certifi python3-chardet python3-click python3-colorama python3-cov-core python3-coverage python3-cycler python3-dateutil python3-decorator python3-defusedxml python3-dev python3-distlib python3-distutils python3-docutils python3-entrypoints python3-filelock python3-html5lib python3-idna python3-imagesize python3-importlib-metadata python3-iniconfig python3-ipython-genutils python3-isort python3-jinja2 python3-jsonschema python3-jupyter-core python3-kiwisolver python3-latexcodec python3-lib2to3 python3-llvmlite python3-markupsafe python3-matplotlib python3-minimal python3-mistune python3-more-itertools python3-mypy-extensions python3-nbconvert python3-nbformat python3-nbsphinx python3-nose2 python3-numba python3-numpy python3-numpydoc python3-packaging python3-pandas python3-pandas-lib python3-pandocfilters python3-pathspec python3-pil python3-pip python3-pkg-resources python3-platformdirs python3-pluggy python3-py python3-pybtex python3-pybtex-docutils python3-pygments python3-pyparsing python3-pyrsistent python3-pytest python3-pytest-cov python3-regex python3-requests python3-roman python3-scipy python3-scitrack python3-setuptools python3-six python3-snowballstemmer python3-sphinx python3-sphinx-bootstrap-theme python3-sphinx-gallery python3-sphinxcontrib.bibtex python3-testpath python3-tinydb python3-toml python3-tqdm python3-traitlets python3-tz python3-urllib3 python3-virtualenv python3-webencodings python3-wheel python3-yaml python3-zipp python3.10 python3.10-dev python3.10-minimal python3.9 python3.9-dev python3.9-minimal sgml-base sphinx-common tox ttf-bitstream-vera xml-core zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc python-black-doc cython-doc dh-make flit gettext-doc libasprintf-dev libgettextpo-dev groff libjs-jquery-ui-docs liblcms2-utils libtool-doc gfortran | fortran95-compiler gcj-jdk llvm-9-doc m4-doc apparmor less www-browser texlive-latex-recommended texlive-xetex texlive-luatex pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin ghc nodejs php python ruby r-base-core libjs-mathjax node-katex citation-style-language-styles libmail-box-perl python3-doc python3-tk python3-venv python-attr-doc python-bleach-doc python-coverage-doc python-cycler-doc docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base python3-genshi python3-lxml python-jinja2-doc python-jsonschema-doc python-latexcodec-doc llvmlite-doc dvipng ffmpeg ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-nose python3-pyqt5 python3-sip python3-tornado texlive-extra-utils ttf-staypuft python-nbconvert-doc texlive-fonts-recommended texlive-plain-generic python-nbsphinx-doc python-nose2-doc gfortran python-numpy-doc python3-numpy-dbg python-pandas-doc python3-statsmodels python-pil-doc subversion python-pybtex-doc python-pybtex-docutils-doc python-pygments-doc python-pyparsing-doc python3-cryptography python3-openssl python3-socks python-requests-doc python-scipy-doc python-setuptools-doc python3-stemmer fonts-freefont-otf imagemagick-6.q16 latexmk python3-sphinx-rtd-theme sphinx-doc tex-gyre python-sphinx-gallery-doc python3-seaborn python-sphinxcontrib.bibtex-doc python3.10-venv python3.10-doc python3.9-venv python3.9-doc sgml-base-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common libltdl-dev llvm-9-dev libmail-sendmail-perl libpaper-utils python3-tk python3-jupyter-client numba-doc python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-xlwt python3-bs4 python3-lxml python3-tables python3-olefile The following NEW packages will be installed: autoconf automake autopoint autotools-dev binfmt-support black bsdextrautils cython3 debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-lyx gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbrotli1 libbsd0 libcmark-gfm-extensions0 libcmark-gfm0 libdebhelper-perl libdeflate0 libdw1 libedit2 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libicu67 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 libllvm9 libmagic-mgc libmagic1 libmd0 libmpdec3 libopenjp2-7 libpfm4 libpipeline1 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal libpython3.10-stdlib libpython3.9 libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib libraqm0 libsigsegv2 libsub-override-perl libtbb2 libtiff5 libtool libuchardet0 libwebp6 libwebpdemux2 libwebpmux3 libxau6 libxcb1 libxdmcp6 libxml2 libyaml-0-2 llvm-9 llvm-9-runtime m4 mailcap man-db media-types mime-support pandoc pandoc-data po-debconf python-babel-localedata python-matplotlib-data python-pip-whl python3 python3-alabaster python3-all python3-all-dev python3-appdirs python3-attr python3-babel python3-bleach python3-certifi python3-chardet python3-click python3-colorama python3-cov-core python3-coverage python3-cycler python3-dateutil python3-decorator python3-defusedxml python3-dev python3-distlib python3-distutils python3-docutils python3-entrypoints python3-filelock python3-html5lib python3-idna python3-imagesize python3-importlib-metadata python3-iniconfig python3-ipython-genutils python3-isort python3-jinja2 python3-jsonschema python3-jupyter-core python3-kiwisolver python3-latexcodec python3-lib2to3 python3-llvmlite python3-markupsafe python3-matplotlib python3-minimal python3-mistune python3-more-itertools python3-mypy-extensions python3-nbconvert python3-nbformat python3-nbsphinx python3-nose2 python3-numba python3-numpy python3-numpydoc python3-packaging python3-pandas python3-pandas-lib python3-pandocfilters python3-pathspec python3-pil python3-pip python3-pkg-resources python3-platformdirs python3-pluggy python3-py python3-pybtex python3-pybtex-docutils python3-pygments python3-pyparsing python3-pyrsistent python3-pytest python3-pytest-cov python3-regex python3-requests python3-roman python3-scipy python3-scitrack python3-setuptools python3-six python3-snowballstemmer python3-sphinx python3-sphinx-bootstrap-theme python3-sphinx-gallery python3-sphinxcontrib.bibtex python3-testpath python3-tinydb python3-toml python3-tqdm python3-traitlets python3-tz python3-urllib3 python3-virtualenv python3-webencodings python3-wheel python3-yaml python3-zipp python3.10 python3.10-dev python3.10-minimal python3.9 python3.9-dev python3.9-minimal sbuild-build-depends-python-cogent-dummy sgml-base sphinx-common tox ttf-bitstream-vera xml-core zlib1g-dev 0 upgraded, 211 newly installed, 0 to remove and 0 not upgraded. Need to get 150 MB of archives. After this operation, 701 MB of additional disk space will be used. Get:1 copy:/<>/resolver-rYe5dP/apt_archive ./ sbuild-build-depends-python-cogent-dummy 0.invalid.0 [782 B] Get:2 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libpython3.9-minimal arm64 3.9.7-4 [781 kB] Get:3 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libexpat1 arm64 2.4.1-3 [75.9 kB] Get:4 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3.9-minimal arm64 3.9.7-4 [2112 kB] Get:5 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-minimal arm64 3.9.4-1ubuntu2 [24.6 kB] Get:6 http://ftpmaster.internal/ubuntu jammy/main arm64 media-types all 4.0.0 [22.2 kB] Get:7 http://ftpmaster.internal/ubuntu jammy/main arm64 mailcap all 3.70ubuntu1 [23.7 kB] Get:8 http://ftpmaster.internal/ubuntu jammy/main arm64 mime-support all 3.66 [3696 B] Get:9 http://ftpmaster.internal/ubuntu jammy/main arm64 libmpdec3 arm64 2.5.1-2build1 [89.0 kB] Get:10 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libpython3.9-stdlib arm64 3.9.7-4 [1803 kB] Get:11 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3.9 arm64 3.9.7-4 [433 kB] Get:12 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libpython3-stdlib arm64 3.9.4-1ubuntu2 [7186 B] Get:13 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3 arm64 3.9.4-1ubuntu2 [22.8 kB] Get:14 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 bsdextrautils arm64 2.37.2-4ubuntu1 [70.1 kB] Get:15 http://ftpmaster.internal/ubuntu jammy/main arm64 libuchardet0 arm64 0.0.7-1build1 [76.8 kB] Get:16 http://ftpmaster.internal/ubuntu jammy/main arm64 groff-base arm64 1.22.4-7 [918 kB] Get:17 http://ftpmaster.internal/ubuntu jammy/main arm64 libpipeline1 arm64 1.5.3-1build1 [22.9 kB] Get:18 http://ftpmaster.internal/ubuntu jammy/main arm64 man-db arm64 2.9.4-2build1 [1175 kB] Get:19 http://ftpmaster.internal/ubuntu jammy/main arm64 libpython3.10-minimal arm64 3.10.0-3 [799 kB] Get:20 http://ftpmaster.internal/ubuntu jammy/main arm64 python3.10-minimal arm64 3.10.0-3 [2162 kB] Get:21 http://ftpmaster.internal/ubuntu jammy/main arm64 sgml-base all 1.30 [12.5 kB] Get:22 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libjs-jquery all 3.5.1+dfsg+~3.5.5-8 [321 kB] Get:23 http://ftpmaster.internal/ubuntu jammy/universe arm64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2ubuntu1 [11.4 kB] Get:24 http://ftpmaster.internal/ubuntu jammy/main arm64 libmd0 arm64 1.0.4-1 [23.8 kB] Get:25 http://ftpmaster.internal/ubuntu jammy/main arm64 libbsd0 arm64 0.11.3-1ubuntu3 [43.5 kB] Get:26 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libelf1 arm64 0.185-2 [51.1 kB] Get:27 http://ftpmaster.internal/ubuntu jammy/main arm64 libfribidi0 arm64 1.0.8-2ubuntu2 [26.1 kB] Get:28 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libglib2.0-0 arm64 2.70.0-3 [1407 kB] Get:29 http://ftpmaster.internal/ubuntu jammy/main arm64 libicu67 arm64 67.1-7ubuntu1 [10.0 MB] Get:30 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libxml2 arm64 2.9.12+dfsg-5 [725 kB] Get:31 http://ftpmaster.internal/ubuntu jammy/main arm64 libyaml-0-2 arm64 0.2.2-1build1 [51.1 kB] Get:32 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-pkg-resources all 58.2.0-1 [130 kB] Get:33 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-yaml arm64 5.4.1-1 [159 kB] Get:34 http://ftpmaster.internal/ubuntu jammy/main arm64 libmagic-mgc arm64 1:5.39-3build1 [236 kB] Get:35 http://ftpmaster.internal/ubuntu jammy/main arm64 libmagic1 arm64 1:5.39-3build1 [87.8 kB] Get:36 http://ftpmaster.internal/ubuntu jammy/main arm64 file arm64 1:5.39-3build1 [24.7 kB] Get:37 http://ftpmaster.internal/ubuntu jammy/main arm64 gettext-base arm64 0.21-4ubuntu3 [35.2 kB] Get:38 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libedit2 arm64 3.1-20210910-1 [95.9 kB] Get:39 http://ftpmaster.internal/ubuntu jammy/main arm64 libxau6 arm64 1:1.0.9-1build4 [7638 B] Get:40 http://ftpmaster.internal/ubuntu jammy/main arm64 libxdmcp6 arm64 1:1.1.3-0ubuntu4 [10.9 kB] Get:41 http://ftpmaster.internal/ubuntu jammy/main arm64 libxcb1 arm64 1.14-3ubuntu2 [49.1 kB] Get:42 http://ftpmaster.internal/ubuntu jammy/main arm64 libsigsegv2 arm64 2.13-1ubuntu2 [14.5 kB] Get:43 http://ftpmaster.internal/ubuntu jammy/main arm64 m4 arm64 1.4.18-5ubuntu1 [196 kB] Get:44 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 autoconf all 2.71-2 [338 kB] Get:45 http://ftpmaster.internal/ubuntu jammy/main arm64 autotools-dev all 20180224.1+nmu1 [39.4 kB] Get:46 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 automake all 1:1.16.5-1 [558 kB] Get:47 http://ftpmaster.internal/ubuntu jammy/main arm64 autopoint all 0.21-4ubuntu3 [422 kB] Get:48 http://ftpmaster.internal/ubuntu jammy/universe arm64 binfmt-support arm64 2.2.1-1 [50.9 kB] Get:49 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-appdirs all 1.4.4-1 [11.0 kB] Get:50 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-colorama all 0.4.4-1 [24.5 kB] Get:51 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-click all 8.0.2-1 [78.3 kB] Get:52 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-mypy-extensions all 0.4.3-2 [5752 B] Get:53 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-pathspec all 0.9.0-1 [28.8 kB] Get:54 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-regex arm64 0.1.20211008-1 [287 kB] Get:55 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-toml all 0.10.2-1 [16.5 kB] Get:56 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 black all 21.4b2-3 [115 kB] Get:57 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 cython3 arm64 0.29.24-0ubuntu3 [2249 kB] Get:58 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libdebhelper-perl all 13.3.4ubuntu3 [62.4 kB] Get:59 http://ftpmaster.internal/ubuntu jammy/main arm64 libtool all 2.4.6-15build1 [164 kB] Get:60 http://ftpmaster.internal/ubuntu jammy/main arm64 dh-autoreconf all 20 [16.1 kB] Get:61 http://ftpmaster.internal/ubuntu jammy/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:62 http://ftpmaster.internal/ubuntu jammy/main arm64 libsub-override-perl all 0.09-2 [9532 B] Get:63 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libfile-stripnondeterminism-perl all 1.12.0-2 [18.0 kB] Get:64 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 dh-strip-nondeterminism all 1.12.0-2 [5208 B] Get:65 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libdw1 arm64 0.185-2 [244 kB] Get:66 http://ftpmaster.internal/ubuntu jammy/main arm64 debugedit arm64 1:5.0-0ubuntu2 [47.0 kB] Get:67 http://ftpmaster.internal/ubuntu jammy/main arm64 dwz arm64 0.14-1build1 [102 kB] Get:68 http://ftpmaster.internal/ubuntu jammy/main arm64 gettext arm64 0.21-4ubuntu3 [775 kB] Get:69 http://ftpmaster.internal/ubuntu jammy/main arm64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:70 http://ftpmaster.internal/ubuntu jammy/main arm64 po-debconf all 1.0.21+nmu1 [233 kB] Get:71 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 debhelper all 13.3.4ubuntu3 [921 kB] Get:72 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-lib2to3 all 3.9.7-1 [77.9 kB] Get:73 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-distutils all 3.9.7-1 [144 kB] Get:74 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 dh-python all 5.20211022.1 [99.5 kB] Get:75 http://ftpmaster.internal/ubuntu jammy/main arm64 xml-core all 0.18+nmu1 [21.6 kB] Get:76 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 docutils-common all 0.17.1+dfsg-2 [117 kB] Get:77 http://ftpmaster.internal/ubuntu jammy/universe arm64 fonts-lyx all 2.3.6-1 [159 kB] Get:78 http://ftpmaster.internal/ubuntu jammy/main arm64 libblas3 arm64 3.9.0-3ubuntu3 [138 kB] Get:79 http://ftpmaster.internal/ubuntu jammy/main arm64 libbrotli1 arm64 1.0.9-2build4 [314 kB] Get:80 http://ftpmaster.internal/ubuntu jammy/universe arm64 libcmark-gfm0 arm64 0.29.0.gfm.0-6 [85.8 kB] Get:81 http://ftpmaster.internal/ubuntu jammy/universe arm64 libcmark-gfm-extensions0 arm64 0.29.0.gfm.0-6 [22.4 kB] Get:82 http://ftpmaster.internal/ubuntu jammy/main arm64 libdeflate0 arm64 1.7-2ubuntu2 [53.1 kB] Get:83 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libexpat1-dev arm64 2.4.1-3 [131 kB] Get:84 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libfreetype6 arm64 2.11.0+dfsg-1 [382 kB] Get:85 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libgfortran5 arm64 11.2.0-10ubuntu1 [411 kB] Get:86 http://ftpmaster.internal/ubuntu jammy/main arm64 libgraphite2-3 arm64 1.3.14-1build1 [68.8 kB] Get:87 http://ftpmaster.internal/ubuntu jammy/main arm64 libharfbuzz0b arm64 2.7.4-1ubuntu2 [352 kB] Get:88 http://ftpmaster.internal/ubuntu jammy/main arm64 libimagequant0 arm64 2.12.2-1.1build1 [32.4 kB] Get:89 http://ftpmaster.internal/ubuntu jammy/main arm64 libjpeg-turbo8 arm64 2.0.6-0ubuntu3 [115 kB] Get:90 http://ftpmaster.internal/ubuntu jammy/main arm64 libjpeg8 arm64 8c-2ubuntu8 [2198 B] Get:91 http://ftpmaster.internal/ubuntu jammy/universe arm64 libjs-jquery-metadata all 12-3 [7096 B] Get:92 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-2 [193 kB] Get:93 http://ftpmaster.internal/ubuntu jammy/universe arm64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-1.1 [6460 B] Get:94 http://ftpmaster.internal/ubuntu jammy/universe arm64 libjs-jquery-ui all 1.12.1+dfsg-8 [231 kB] Get:95 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libjs-underscore all 1.9.1~dfsg-4 [103 kB] Get:96 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libjs-sphinxdoc all 4.2.0-5 [137 kB] Get:97 http://ftpmaster.internal/ubuntu jammy/main arm64 liblapack3 arm64 3.9.0-3ubuntu3 [1951 kB] Get:98 http://ftpmaster.internal/ubuntu jammy/universe arm64 liblbfgsb0 arm64 3.0+dfsg.3-9 [24.5 kB] Get:99 http://ftpmaster.internal/ubuntu jammy/main arm64 liblcms2-2 arm64 2.12~rc1-2build1 [157 kB] Get:100 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 libllvm9 arm64 1:9.0.1-20ubuntu2 [14.5 MB] Get:101 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libpython3.9 arm64 3.9.7-4 [1841 kB] Get:102 http://ftpmaster.internal/ubuntu jammy/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2ubuntu7 [163 kB] Get:103 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libpython3.9-dev arm64 3.9.7-4 [4540 kB] Get:104 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libpython3-dev arm64 3.9.4-1ubuntu2 [7448 B] Get:105 http://ftpmaster.internal/ubuntu jammy/main arm64 libpython3.10-stdlib arm64 3.10.0-3 [1814 kB] Get:106 http://ftpmaster.internal/ubuntu jammy/main arm64 libpython3.10 arm64 3.10.0-3 [1879 kB] Get:107 http://ftpmaster.internal/ubuntu jammy/main arm64 libpython3.10-dev arm64 3.10.0-3 [4596 kB] Get:108 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libpython3-all-dev arm64 3.9.4-1ubuntu2 [926 B] Get:109 http://ftpmaster.internal/ubuntu jammy/universe arm64 libraqm0 arm64 0.7.0-4 [10.7 kB] Get:110 http://ftpmaster.internal/ubuntu jammy/main arm64 libjbig0 arm64 2.1-3.1build2 [28.7 kB] Get:111 http://ftpmaster.internal/ubuntu jammy/main arm64 libwebp6 arm64 0.6.1-2.1build1 [188 kB] Get:112 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libtiff5 arm64 4.3.0-2 [180 kB] Get:113 http://ftpmaster.internal/ubuntu jammy/main arm64 libwebpdemux2 arm64 0.6.1-2.1build1 [10.1 kB] Get:114 http://ftpmaster.internal/ubuntu jammy/main arm64 libwebpmux3 arm64 0.6.1-2.1build1 [20.5 kB] Get:115 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 llvm-9-runtime arm64 1:9.0.1-20ubuntu2 [168 kB] Get:116 http://ftpmaster.internal/ubuntu jammy/universe arm64 libpfm4 arm64 4.11.1+git32-gd0b85fb-1 [41.4 kB] Get:117 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 llvm-9 arm64 1:9.0.1-20ubuntu2 [4383 kB] Get:118 http://ftpmaster.internal/ubuntu jammy/universe arm64 pandoc-data all 2.9.2.1-1ubuntu4 [81.7 kB] Get:119 http://ftpmaster.internal/ubuntu jammy/universe arm64 pandoc arm64 2.9.2.1-1ubuntu4 [22.2 MB] Get:120 http://ftpmaster.internal/ubuntu jammy/main arm64 python-babel-localedata all 2.8.0+dfsg.1-7 [4982 kB] Get:121 http://ftpmaster.internal/ubuntu jammy/universe arm64 ttf-bitstream-vera all 1.10-8.1 [223 kB] Get:122 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python-matplotlib-data all 3.3.4-2 [4036 kB] Get:123 http://ftpmaster.internal/ubuntu jammy/universe arm64 python-pip-whl all 20.3.4-4 [1897 kB] Get:124 http://ftpmaster.internal/ubuntu jammy/main arm64 python3.10 arm64 3.10.0-3 [473 kB] Get:125 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-all arm64 3.9.4-1ubuntu2 [918 B] Get:126 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3.9-dev arm64 3.9.7-4 [508 kB] Get:127 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-dev arm64 3.9.4-1ubuntu2 [25.5 kB] Get:128 http://ftpmaster.internal/ubuntu jammy/main arm64 python3.10-dev arm64 3.10.0-3 [509 kB] Get:129 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-all-dev arm64 3.9.4-1ubuntu2 [928 B] Get:130 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-attr all 20.3.0-1 [40.2 kB] Get:131 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-tz all 2021.3-1 [33.3 kB] Get:132 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-babel all 2.8.0+dfsg.1-7 [85.1 kB] Get:133 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-pyparsing all 2.4.7-1 [61.4 kB] Get:134 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-packaging all 21.0-1 [30.4 kB] Get:135 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-six all 1.16.0-2 [12.6 kB] Get:136 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-webencodings all 0.5.1-4 [11.8 kB] Get:137 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-html5lib all 1.1-3 [87.0 kB] Get:138 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-bleach all 4.1.0-1 [40.7 kB] Get:139 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-certifi all 2020.6.20-1 [150 kB] Get:140 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-chardet all 4.0.0-1 [98.0 kB] Get:141 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-coverage arm64 5.1+dfsg.1-2build2 [128 kB] Get:142 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-nose2 all 0.9.2-1 [89.4 kB] Get:143 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-cov-core all 1.15.0-3build1 [7652 B] Get:144 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-cycler all 0.10.0-3 [8132 B] Get:145 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-dateutil all 2.8.1-6 [78.4 kB] Get:146 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] Get:147 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-defusedxml all 0.7.1-1 [43.2 kB] Get:148 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-distlib all 0.3.2+really+0.3.1-0.1 [116 kB] Get:149 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-roman all 3.3-1 [10.6 kB] Get:150 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-docutils all 0.17.1+dfsg-2 [387 kB] Get:151 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-entrypoints all 0.3-8 [5730 B] Get:152 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-filelock all 3.3.2-1 [8762 B] Get:153 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-idna all 2.10-1 [35.2 kB] Get:154 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-imagesize all 1.2.0-2 [5868 B] Get:155 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-more-itertools all 4.2.0-3 [39.8 kB] Get:156 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-zipp all 1.0.0-3 [5440 B] Get:157 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-importlib-metadata all 4.6.4-1 [16.2 kB] Get:158 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-iniconfig all 1.1.1-1 [5960 B] Get:159 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-ipython-genutils all 0.2.0-5 [21.9 kB] Get:160 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-isort all 5.6.4-1 [63.1 kB] Get:161 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-markupsafe arm64 2.0.1-2 [12.8 kB] Get:162 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-jinja2 all 3.0.1-2 [108 kB] Get:163 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-setuptools all 58.2.0-1 [336 kB] Get:164 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-pyrsistent arm64 0.15.5-1build5 [55.2 kB] Get:165 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-jsonschema all 3.2.0-0ubuntu2 [43.1 kB] Get:166 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-traitlets all 5.1.1-1 [81.2 kB] Get:167 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-jupyter-core all 4.7.1-1 [40.1 kB] Get:168 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-kiwisolver arm64 1.3.2-1 [57.8 kB] Get:169 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-latexcodec all 2.0.1-1 [16.5 kB] Get:170 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-llvmlite arm64 0.35.0-3 [107 kB] Get:171 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-numpy arm64 1:1.20.2-1ubuntu1 [8307 kB] Get:172 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 libopenjp2-7 arm64 2.4.0-3 [155 kB] Get:173 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-pil arm64 8.3.2-1 [436 kB] Get:174 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-matplotlib arm64 3.3.4-2 [6327 kB] Get:175 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-mistune all 0.8.4-5 [14.6 kB] Get:176 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-nbformat all 5.1.3-1 [31.4 kB] Get:177 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-pandocfilters all 1.4.3-1 [20.1 kB] Get:178 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-pygments all 2.7.1+dfsg-2.1 [639 kB] Get:179 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-testpath all 0.5.0+dfsg-1 [9900 B] Get:180 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-nbconvert all 5.6.1-3 [341 kB] Get:181 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 sphinx-common all 4.2.0-5 [672 kB] Get:182 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-alabaster all 0.7.12-1 [17.8 kB] Get:183 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-urllib3 all 1.26.5-1~exp1 [96.4 kB] Get:184 http://ftpmaster.internal/ubuntu jammy/main arm64 python3-requests all 2.25.1+dfsg-2 [47.9 kB] Get:185 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-snowballstemmer all 2.1.0-2 [60.7 kB] Get:186 http://ftpmaster.internal/ubuntu jammy-proposed/main arm64 python3-sphinx all 4.2.0-5 [537 kB] Get:187 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-nbsphinx all 0.8.7+ds-1 [36.3 kB] Get:188 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-scipy arm64 1.7.1-1ubuntu1 [15.0 MB] Get:189 http://ftpmaster.internal/ubuntu jammy/universe arm64 libtbb2 arm64 2020.3-1 [94.6 kB] Get:190 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-numba arm64 0.52.0-4 [1449 kB] Get:191 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-numpydoc all 1.1.0-3 [40.0 kB] Get:192 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-pandas-lib arm64 1.1.5+dfsg-2 [2901 kB] Get:193 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-pandas all 1.1.5+dfsg-2 [2077 kB] Get:194 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-wheel all 0.34.2-1 [23.8 kB] Get:195 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-pip all 20.3.4-4 [283 kB] Get:196 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-platformdirs all 2.4.0-1 [13.4 kB] Get:197 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-pluggy all 0.13.0-7 [19.1 kB] Get:198 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-py all 1.10.0-1 [71.9 kB] Get:199 http://ftpmaster.internal/ubuntu jammy/universe arm64 python3-pybtex all 0.23.0-1 [69.4 kB] Get:200 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-pybtex-docutils all 1.0.1-1 [5560 B] Get:201 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-pytest all 6.2.5-1ubuntu1 [214 kB] Get:202 http://ftpmaster.internal/ubuntu jammy/universe arm64 libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] Get:203 http://ftpmaster.internal/ubuntu jammy-proposed/universe arm64 python3-pytest-cov all 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Selecting previously unselected package sbuild-build-depends-python-cogent-dummy. Preparing to unpack .../199-sbuild-build-depends-python-cogent-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-python-cogent-dummy (0.invalid.0) ... Setting up media-types (4.0.0) ... Setting up libpipeline1:arm64 (1.5.3-1build1) ... Setting up libgraphite2-3:arm64 (1.3.14-1build1) ... Setting up liblcms2-2:arm64 (2.12~rc1-2build1) ... Setting up libxau6:arm64 (1:1.0.9-1build4) ... Setting up ttf-bitstream-vera (1.10-8.1) ... Setting up bsdextrautils (2.37.2-4ubuntu1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:arm64 (67.1-7ubuntu1) ... Setting up libmagic-mgc (1:5.39-3build1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:arm64 (0.2.2-1build1) ... Setting up libglib2.0-0:arm64 (2.70.0-3) ... No schema files found: doing nothing. Setting up fonts-lyx (2.3.6-1) ... Setting up libdebhelper-perl (13.3.4ubuntu3) ... Setting up libbrotli1:arm64 (1.0.9-2build4) ... Setting up libtbb2:arm64 (2020.3-1) ... Setting up libmagic1:arm64 (1:5.39-3build1) ... Setting up libdeflate0:arm64 (1.7-2ubuntu2) ... Setting up gettext-base (0.21-4ubuntu3) ... Setting up file (1:5.39-3build1) ... Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-1.1) ... Setting up libjbig0:arm64 (2.1-3.1build2) ... Setting up python-babel-localedata (2.8.0+dfsg.1-7) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libblas3:arm64 (3.9.0-3ubuntu3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libpfm4:arm64 (4.11.1+git32-gd0b85fb-1) ... Setting up libexpat1-dev:arm64 (2.4.1-3) ... Setting up libfreetype6:arm64 (2.11.0+dfsg-1) ... Setting up libsigsegv2:arm64 (2.13-1ubuntu2) ... Setting up libfribidi0:arm64 (1.0.8-2ubuntu2) ... Setting up libimagequant0:arm64 (2.12.2-1.1build1) ... Setting up libpython3.10-minimal:arm64 (3.10.0-3) ... Setting up autopoint (0.21-4ubuntu3) ... Setting up binfmt-support (2.2.1-1) ... Created symlink /etc/systemd/system/multi-user.target.wants/binfmt-support.service → /lib/systemd/system/binfmt-support.service. Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libwebp6:arm64 (0.6.1-2.1build1) ... Setting up libcmark-gfm0:arm64 (0.29.0.gfm.0-6) ... Setting up libjpeg-turbo8:arm64 (2.0.6-0ubuntu3) ... Setting up libgfortran5:arm64 (11.2.0-10ubuntu1) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-2ubuntu7) ... Setting up libmd0:arm64 (1.0.4-1) ... Setting up libuchardet0:arm64 (0.0.7-1build1) ... Setting up libmpdec3:arm64 (2.5.1-2build1) ... Setting up libopenjp2-7:arm64 (2.4.0-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libharfbuzz0b:arm64 (2.7.4-1ubuntu2) ... Setting up sgml-base (1.30) ... Setting up python-pip-whl (20.3.4-4) ... Setting up pandoc-data (2.9.2.1-1ubuntu4) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-8) ... Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2ubuntu1) ... Setting up python-matplotlib-data (3.3.4-2) ... Setting up libwebpmux3:arm64 (0.6.1-2.1build1) ... Setting up libbsd0:arm64 (0.11.3-1ubuntu3) ... Setting up mailcap (3.70ubuntu1) ... Setting up libelf1:arm64 (0.185-2) ... Setting up libxml2:arm64 (2.9.12+dfsg-5) ... Setting up libpython3.9-stdlib:arm64 (3.9.7-4) ... Setting up libpython3-stdlib:arm64 (3.9.4-1ubuntu2) ... Setting up libjs-underscore (1.9.1~dfsg-4) ... Setting up libjpeg8:arm64 (8c-2ubuntu8) ... Setting up libfile-stripnondeterminism-perl (1.12.0-2) ... Setting up libdw1:arm64 (0.185-2) ... Setting up libxdmcp6:arm64 (1:1.1.3-0ubuntu4) ... Setting up liblapack3:arm64 (3.9.0-3ubuntu3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libxcb1:arm64 (1.14-3ubuntu2) ... Setting up gettext (0.21-4ubuntu3) ... Setting up mime-support (3.66) ... Setting up libtool (2.4.6-15build1) ... Setting up libwebpdemux2:arm64 (0.6.1-2.1build1) ... Setting up libedit2:arm64 (3.1-20210910-1) ... Setting up m4 (1.4.18-5ubuntu1) ... Setting up python3.10-minimal (3.10.0-3) ... Setting up libcmark-gfm-extensions0:arm64 (0.29.0.gfm.0-6) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libpython3.10-stdlib:arm64 (3.10.0-3) ... Setting up libpython3.9:arm64 (3.9.7-4) ... Setting up libjs-jquery-ui (1.12.1+dfsg-8) ... Setting up pandoc (2.9.2.1-1ubuntu4) ... Setting up libjs-jquery-metadata (12-3) ... Setting up libraqm0:arm64 (0.7.0-4) ... Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... Setting up libjs-sphinxdoc (4.2.0-5) ... Setting up autoconf (2.71-2) ... Setting up dh-strip-nondeterminism (1.12.0-2) ... Setting up dwz (0.14-1build1) ... Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-2) ... Setting up groff-base (1.22.4-7) ... Setting up xml-core (0.18+nmu1) ... Setting up debugedit (1:5.0-0ubuntu2) ... Setting up libtiff5:arm64 (4.3.0-2) ... Setting up libllvm9:arm64 (1:9.0.1-20ubuntu2) ... Setting up python3.9 (3.9.7-4) ... Setting up liblbfgsb0:arm64 (3.0+dfsg.3-9) ... Setting up automake (1:1.16.5-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libpython3.10:arm64 (3.10.0-3) ... Setting up python3.10 (3.10.0-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.9-dev:arm64 (3.9.7-4) ... Setting up python3 (3.9.4-1ubuntu2) ... Setting up python3-distlib (0.3.2+really+0.3.1-0.1) ... Setting up python3-pandocfilters (1.4.3-1) ... Setting up man-db (2.9.4-2build1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3-markupsafe (2.0.1-2) ... Setting up python3-wheel (0.34.2-1) ... Setting up python3-webencodings (0.5.1-4) ... Setting up python3-platformdirs (2.4.0-1) ... Setting up python3-tz (2021.3-1) ... Setting up python3-six (1.16.0-2) ... Setting up dh-autoreconf (20) ... Setting up python3-pil:arm64 (8.3.2-1) ... Setting up python3-roman (3.3-1) ... Setting up python3-decorator (4.4.2-0ubuntu1) ... Setting up python3-pyparsing (2.4.7-1) ... Setting up python3-certifi (2020.6.20-1) ... Setting up python3-sphinx-bootstrap-theme (0.8.0-1) ... Setting up python3-snowballstemmer (2.1.0-2) ... Setting up python3-testpath (0.5.0+dfsg-1) ... Setting up sphinx-common (4.2.0-5) ... Setting up python3-cycler (0.10.0-3) ... Setting up python3-kiwisolver (1.3.2-1) ... Setting up python3-idna (2.10-1) ... 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Setting up python3-more-itertools (4.2.0-3) ... Setting up python3-iniconfig (1.1.1-1) ... Setting up python3-attr (20.3.0-1) ... Setting up python3-filelock (3.3.2-1) ... Setting up libpython3-dev:arm64 (3.9.4-1ubuntu2) ... Setting up python3-setuptools (58.2.0-1) ... Setting up python3-py (1.10.0-1) ... Setting up python3-babel (2.8.0+dfsg.1-7) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-colorama (0.4.4-1) ... Setting up python3-defusedxml (0.7.1-1) ... Setting up python3-ipython-genutils (0.2.0-5) ... Setting up python3-alabaster (0.7.12-1) ... Setting up python3-mypy-extensions (0.4.3-2) ... Setting up python3-tqdm (4.57.0-2) ... Setting up python3-tinydb (3.15.2-2) ... Setting up python3-latexcodec (2.0.1-1) ... Setting up python3-all (3.9.4-1ubuntu2) ... Setting up python3-coverage (5.1+dfsg.1-2build2) ... Setting up python3-yaml (5.4.1-1) ... Setting up debhelper (13.3.4ubuntu3) ... Setting up python3-nose2 (0.9.2-1) ... Setting up python3-zipp (1.0.0-3) ... Setting up python3-click (8.0.2-1) ... Setting up python3-jinja2 (3.0.1-2) ... Setting up python3-pygments (2.7.1+dfsg-2.1) ... Setting up python3-packaging (21.0-1) ... Setting up python3-chardet (4.0.0-1) ... Setting up llvm-9 (1:9.0.1-20ubuntu2) ... Setting up libpython3-all-dev:arm64 (3.9.4-1ubuntu2) ... Setting up python3-dev (3.9.4-1ubuntu2) ... Setting up python3-requests (2.25.1+dfsg-2) ... Setting up python3-pip (20.3.4-4) ... Setting up python3-numpy (1:1.20.2-1ubuntu1) ... Setting up python3-pybtex (0.23.0-1) ... Setting up python3-jupyter-core (4.7.1-1) ... Setting up python3-all-dev (3.9.4-1ubuntu2) ... Setting up python3-matplotlib (3.3.4-2) ... Setting up python3-scipy (1.7.1-1ubuntu1) ... Setting up python3-importlib-metadata (4.6.4-1) ... Setting up python3-cov-core (1.15.0-3build1) ... Setting up python3-pandas-lib:arm64 (1.1.5+dfsg-2) ... Setting up python3-virtualenv (20.9.0+ds-1) ... Setting up black (21.4b2-3) ... Setting up python3-bleach (4.1.0-1) ... Setting up python3-llvmlite (0.35.0-3) ... Setting up python3-pandas (1.1.5+dfsg-2) ... Setting up python3-jsonschema (3.2.0-0ubuntu2) ... Setting up python3-pluggy (0.13.0-7) ... Setting up tox (3.21.4-1) ... Setting up python3-pytest (6.2.5-1ubuntu1) ... Setting up python3-pytest-cov (3.0.0-1) ... Setting up python3-nbformat (5.1.3-1) ... Setting up python3-numba (0.52.0-4) ... update-alternatives: using /usr/share/python3-numba/numba to provide /usr/bin/numba (numba) in auto mode Setting up python3-nbconvert (5.6.1-3) ... Setting up python3-scitrack (2021.5.3-1) ... Processing triggers for libc-bin (2.34-0ubuntu3) ... Processing triggers for sgml-base (1.30) ... Setting up docutils-common (0.17.1+dfsg-2) ... Processing triggers for sgml-base (1.30) ... Setting up python3-docutils (0.17.1+dfsg-2) ... Setting up python3-pybtex-docutils (1.0.1-1) ... Setting up python3-sphinx (4.2.0-5) ... Setting up python3-sphinx-gallery (0.10.0-1) ... Setting up python3-sphinxcontrib.bibtex (2.4.1-2) ... Setting up python3-nbsphinx (0.8.7+ds-1) ... Setting up python3-numpydoc (1.1.0-3) ... Setting up sbuild-build-depends-python-cogent-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-161-generic arm64 (aarch64) Toolchain package versions: binutils_2.37-7ubuntu1 dpkg-dev_1.20.9ubuntu2 g++-11_11.2.0-10ubuntu1 gcc-11_11.2.0-10ubuntu1 libc6-dev_2.34-0ubuntu3 libstdc++-11-dev_11.2.0-10ubuntu1 libstdc++6_11.2.0-10ubuntu1 linux-libc-dev_5.13.0-19.19 Package versions: adduser_3.118ubuntu5 advancecomp_2.1-2.1ubuntu1 apt_2.3.11 autoconf_2.71-2 automake_1:1.16.5-1 autopoint_0.21-4ubuntu3 autotools-dev_20180224.1+nmu1 base-files_12ubuntu1 base-passwd_3.5.52 bash_5.1-3ubuntu2 binfmt-support_2.2.1-1 binutils_2.37-7ubuntu1 binutils-aarch64-linux-gnu_2.37-7ubuntu1 binutils-common_2.37-7ubuntu1 black_21.4b2-3 bsdextrautils_2.37.2-4ubuntu1 bsdutils_1:2.37.2-4ubuntu1 build-essential_12.9ubuntu2 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libjs-jquery_3.5.1+dfsg+~3.5.5-8 libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2ubuntu1 libjs-jquery-isonscreen_1.2.0-1.1 libjs-jquery-metadata_12-3 libjs-jquery-tablesorter_1:2.31.3+dfsg1-2 libjs-jquery-throttle-debounce_1.1+dfsg.1-1.1 libjs-jquery-ui_1.12.1+dfsg-8 libjs-sphinxdoc_4.2.0-5 libjs-underscore_1.9.1~dfsg-4 libjson-c5_0.15-2build3 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2ubuntu2 libkmod2_28-1ubuntu4 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 liblapack3_3.9.0-3ubuntu3 liblbfgsb0_3.0+dfsg.3-9 liblcms2-2_2.12~rc1-2build1 libllvm9_1:9.0.1-20ubuntu2 liblockfile-bin_1.17-1build1 liblockfile1_1.17-1build1 liblsan0_11.2.0-10ubuntu1 liblz4-1_1.9.3-2build1 liblzma5_5.2.5-2build1 libmagic-mgc_1:5.39-3build1 libmagic1_1:5.39-3build1 libmd0_1.0.4-1 libmount1_2.37.2-4ubuntu1 libmpc3_1.2.1-1 libmpdec3_2.5.1-2build1 libmpfr6_4.1.0-3build2 libncurses6_6.2+20210905-1 libncursesw6_6.2+20210905-1 libnettle8_3.7.3-1build1 libnpth0_1.6-3build1 libnsl-dev_1.3.0-2build1 libnsl2_1.3.0-2build1 libopenjp2-7_2.4.0-3 libp11-kit0_0.24.0-5 libpam-modules_1.4.0-10ubuntu1 libpam-modules-bin_1.4.0-10ubuntu1 libpam-runtime_1.4.0-10ubuntu1 libpam0g_1.4.0-10ubuntu1 libpcre2-8-0_10.37-0ubuntu2 libpcre3_2:8.39-13build4 libperl5.32_5.32.1-3ubuntu3 libpfm4_4.11.1+git32-gd0b85fb-1 libpipeline1_1.5.3-1build1 libpng16-16_1.6.37-3build4 libprocps8_2:3.3.17-5ubuntu3 libpython3-all-dev_3.9.4-1ubuntu2 libpython3-dev_3.9.4-1ubuntu2 libpython3-stdlib_3.9.4-1ubuntu2 libpython3.10_3.10.0-3 libpython3.10-dev_3.10.0-3 libpython3.10-minimal_3.10.0-3 libpython3.10-stdlib_3.10.0-3 libpython3.9_3.9.7-4 libpython3.9-dev_3.9.7-4 libpython3.9-minimal_3.9.7-4 libpython3.9-stdlib_3.9.7-4 libraqm0_0.7.0-4 libreadline8_8.1-2build1 libseccomp2_2.5.1-1ubuntu2 libselinux1_3.1-3build3 libsemanage-common_3.1-1ubuntu3 libsemanage1_3.1-1ubuntu3 libsepol1_3.1-1ubuntu2 libsigsegv2_2.13-1ubuntu2 libsmartcols1_2.37.2-4ubuntu1 libsqlite3-0_3.36.0-2 libss2_1.46.3-1ubuntu3 libssl1.1_1.1.1l-1ubuntu1 libstdc++-11-dev_11.2.0-10ubuntu1 libstdc++6_11.2.0-10ubuntu1 libsub-override-perl_0.09-2 libsystemd0_248.3-1ubuntu8 libtasn1-6_4.17.0-2 libtbb2_2020.3-1 libtiff5_4.3.0-2 libtinfo6_6.2+20210905-1 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15build1 libtsan0_11.2.0-10ubuntu1 libubsan1_11.2.0-10ubuntu1 libuchardet0_0.0.7-1build1 libudev1_248.3-1ubuntu8 libunistring2_0.9.10-6 libuuid1_2.37.2-4ubuntu1 libwebp6_0.6.1-2.1build1 libwebpdemux2_0.6.1-2.1build1 libwebpmux3_0.6.1-2.1build1 libxau6_1:1.0.9-1build4 libxcb1_1.14-3ubuntu2 libxdmcp6_1:1.1.3-0ubuntu4 libxml2_2.9.12+dfsg-5 libxxhash0_0.8.0-2build1 libyaml-0-2_0.2.2-1build1 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.13.0-19.19 llvm-9_1:9.0.1-20ubuntu2 llvm-9-runtime_1:9.0.1-20ubuntu2 lockfile-progs_0.1.19 login_1:4.8.1-1ubuntu9 logsave_1.46.3-1ubuntu3 lsb-base_11.1.0ubuntu3 lto-disabled-list_16 m4_1.4.18-5ubuntu1 mailcap_3.70ubuntu1 make_4.3-4ubuntu2 man-db_2.9.4-2build1 mawk_1.3.4.20200120-2build1 media-types_4.0.0 mime-support_3.66 mount_2.37.2-4ubuntu1 ncurses-base_6.2+20210905-1 ncurses-bin_6.2+20210905-1 openssl_1.1.1l-1ubuntu1 optipng_0.7.7-2 pandoc_2.9.2.1-1ubuntu4 pandoc-data_2.9.2.1-1ubuntu4 passwd_1:4.8.1-1ubuntu9 patch_2.7.6-7build1 perl_5.32.1-3ubuntu3 perl-base_5.32.1-3ubuntu3 perl-modules-5.32_5.32.1-3ubuntu3 pinentry-curses_1.1.1-1build1 pkgbinarymangler_148 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3 procps_2:3.3.17-5ubuntu3 python-babel-localedata_2.8.0+dfsg.1-7 python-matplotlib-data_3.3.4-2 python-pip-whl_20.3.4-4 python3_3.9.4-1ubuntu2 python3-alabaster_0.7.12-1 python3-all_3.9.4-1ubuntu2 python3-all-dev_3.9.4-1ubuntu2 python3-appdirs_1.4.4-1 python3-attr_20.3.0-1 python3-babel_2.8.0+dfsg.1-7 python3-bleach_4.1.0-1 python3-certifi_2020.6.20-1 python3-chardet_4.0.0-1 python3-click_8.0.2-1 python3-colorama_0.4.4-1 python3-cov-core_1.15.0-3build1 python3-coverage_5.1+dfsg.1-2build2 python3-cycler_0.10.0-3 python3-dateutil_2.8.1-6 python3-decorator_4.4.2-0ubuntu1 python3-defusedxml_0.7.1-1 python3-dev_3.9.4-1ubuntu2 python3-distlib_0.3.2+really+0.3.1-0.1 python3-distutils_3.9.7-1 python3-docutils_0.17.1+dfsg-2 python3-entrypoints_0.3-8 python3-filelock_3.3.2-1 python3-html5lib_1.1-3 python3-idna_2.10-1 python3-imagesize_1.2.0-2 python3-importlib-metadata_4.6.4-1 python3-iniconfig_1.1.1-1 python3-ipython-genutils_0.2.0-5 python3-isort_5.6.4-1 python3-jinja2_3.0.1-2 python3-jsonschema_3.2.0-0ubuntu2 python3-jupyter-core_4.7.1-1 python3-kiwisolver_1.3.2-1 python3-latexcodec_2.0.1-1 python3-lib2to3_3.9.7-1 python3-llvmlite_0.35.0-3 python3-markupsafe_2.0.1-2 python3-matplotlib_3.3.4-2 python3-minimal_3.9.4-1ubuntu2 python3-mistune_0.8.4-5 python3-more-itertools_4.2.0-3 python3-mypy-extensions_0.4.3-2 python3-nbconvert_5.6.1-3 python3-nbformat_5.1.3-1 python3-nbsphinx_0.8.7+ds-1 python3-nose2_0.9.2-1 python3-numba_0.52.0-4 python3-numpy_1:1.20.2-1ubuntu1 python3-numpydoc_1.1.0-3 python3-packaging_21.0-1 python3-pandas_1.1.5+dfsg-2 python3-pandas-lib_1.1.5+dfsg-2 python3-pandocfilters_1.4.3-1 python3-pathspec_0.9.0-1 python3-pil_8.3.2-1 python3-pip_20.3.4-4 python3-pkg-resources_58.2.0-1 python3-platformdirs_2.4.0-1 python3-pluggy_0.13.0-7 python3-py_1.10.0-1 python3-pybtex_0.23.0-1 python3-pybtex-docutils_1.0.1-1 python3-pygments_2.7.1+dfsg-2.1 python3-pyparsing_2.4.7-1 python3-pyrsistent_0.15.5-1build5 python3-pytest_6.2.5-1ubuntu1 python3-pytest-cov_3.0.0-1 python3-regex_0.1.20211008-1 python3-requests_2.25.1+dfsg-2 python3-roman_3.3-1 python3-scipy_1.7.1-1ubuntu1 python3-scitrack_2021.5.3-1 python3-setuptools_58.2.0-1 python3-six_1.16.0-2 python3-snowballstemmer_2.1.0-2 python3-sphinx_4.2.0-5 python3-sphinx-bootstrap-theme_0.8.0-1 python3-sphinx-gallery_0.10.0-1 python3-sphinxcontrib.bibtex_2.4.1-2 python3-testpath_0.5.0+dfsg-1 python3-tinydb_3.15.2-2 python3-toml_0.10.2-1 python3-tqdm_4.57.0-2 python3-traitlets_5.1.1-1 python3-tz_2021.3-1 python3-urllib3_1.26.5-1~exp1 python3-virtualenv_20.9.0+ds-1 python3-webencodings_0.5.1-4 python3-wheel_0.34.2-1 python3-yaml_5.4.1-1 python3-zipp_1.0.0-3 python3.10_3.10.0-3 python3.10-dev_3.10.0-3 python3.10-minimal_3.10.0-3 python3.9_3.9.7-4 python3.9-dev_3.9.7-4 python3.9-minimal_3.9.7-4 readline-common_8.1-2build1 rpcsvc-proto_1.4.2-0ubuntu5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-cogent-dummy_0.invalid.0 sed_4.7-1ubuntu2 sensible-utils_0.0.17 sgml-base_1.30 sphinx-common_4.2.0-5 systemd_248.3-1ubuntu8 systemd-sysv_248.3-1ubuntu8 systemd-timesyncd_248.3-1ubuntu8 sysvinit-utils_2.96-7ubuntu2 tar_1.34+dfsg-1build2 tox_3.21.4-1 ttf-bitstream-vera_1.10-8.1 tzdata_2021e-1ubuntu1 ubuntu-keyring_2021.03.26 usrmerge_25ubuntu2 util-linux_2.37.2-4ubuntu1 xml-core_0.18+nmu1 xz-utils_5.2.5-2build1 zlib1g_1:1.2.11.dfsg-2ubuntu7 zlib1g-dev_1:1.2.11.dfsg-2ubuntu7 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Thu Sep 9 06:19:45 2021 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./python-cogent_2021.5.7a+dfsg-2.dsc dpkg-source: info: extracting python-cogent in /<>/python-cogent-2021.5.7a+dfsg dpkg-source: info: unpacking python-cogent_2021.5.7a+dfsg.orig.tar.xz dpkg-source: info: unpacking python-cogent_2021.5.7a+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying sphinx.patch dpkg-source: info: applying fix_interpreter.patch dpkg-source: info: applying py39_union_dict Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-22303528 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-22303528 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-22303528 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package python-cogent dpkg-buildpackage: info: source version 2021.5.7a+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:232: python3.10 setup.py clean /usr/lib/python3/dist-packages/setuptools/dist.py:487: UserWarning: Normalizing '2021.5.7a' to '2021.5.7a0' warnings.warn(tmpl.format(**locals())) running clean removing '/<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build' (and everything under it) 'build/bdist.linux-arm64' does not exist -- can't clean it 'build/scripts-3.10' does not exist -- can't clean it I: pybuild base:232: python3.9 setup.py clean /usr/lib/python3/dist-packages/setuptools/dist.py:487: UserWarning: Normalizing '2021.5.7a' to '2021.5.7a0' warnings.warn(tmpl.format(**locals())) running clean removing '/<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build' (and everything under it) 'build/bdist.linux-arm64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/<>/python-cogent-2021.5.7a+dfsg' #These files are rebuilt on-the-fly for f in `find -name '*.c'` ; do \ head -n 1 "$f" | grep -q '^/\* Generated by Cython' && rm "$f" ; \ done rm -rf build build-stamp rm -rf doc/_build dh_clean make[1]: Leaving directory '/<>/python-cogent-2021.5.7a+dfsg' debian/rules binary-arch dh binary-arch --with python3 --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:232: python3.10 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:487: UserWarning: Normalizing '2021.5.7a' to '2021.5.7a0' warnings.warn(tmpl.format(**locals())) running config I: pybuild base:232: python3.9 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:487: UserWarning: Normalizing '2021.5.7a' to '2021.5.7a0' warnings.warn(tmpl.format(**locals())) running config debian/rules override_dh_auto_build make[1]: Entering directory '/<>/python-cogent-2021.5.7a+dfsg' dh_auto_build I: pybuild base:232: /usr/bin/python3.10 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:487: UserWarning: Normalizing '2021.5.7a' to '2021.5.7a0' warnings.warn(tmpl.format(**locals())) running build running build_py creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3 copying src/cogent3/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3 creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/table.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/checkpointing.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/dict_array.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/warning.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/transform.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/progress_display.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/recode_alignment.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/union_dict.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/misc.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/deserialise.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util copying src/cogent3/util/parallel.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/util creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/phylo copying src/cogent3/phylo/nj.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/phylo copying src/cogent3/phylo/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/phylo copying src/cogent3/phylo/tree_collection.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/phylo copying src/cogent3/phylo/maximum_likelihood.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/phylo copying src/cogent3/phylo/util.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/phylo copying src/cogent3/phylo/tree_space.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/phylo copying src/cogent3/phylo/consensus.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/phylo copying src/cogent3/phylo/least_squares.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/phylo creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format copying src/cogent3/format/fasta.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format copying src/cogent3/format/phylip.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format copying src/cogent3/format/table.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format copying src/cogent3/format/paml.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format copying src/cogent3/format/alignment.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format copying src/cogent3/format/bedgraph.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format copying src/cogent3/format/clustal.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format copying src/cogent3/format/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format copying src/cogent3/format/gde.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format copying src/cogent3/format/nexus.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format copying src/cogent3/format/util.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/format creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/fasta.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/blast_xml.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/phylip.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/table.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/paml.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/clustal.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/psl.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/unigene.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/record_finder.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/cogent3_json.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/locuslink.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/ncbi_taxonomy.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/blast.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/record.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/genbank.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/gcg.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/rdb.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/nexus.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/gbseq.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/jaspar.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/paml_matrix.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/cigar.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/tree.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/tree_xml.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/newick.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/sequence.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/cisbp.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/tinyseq.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/greengenes.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/gff.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/dialign.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse copying src/cogent3/parse/ebi.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/parse creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/data copying src/cogent3/data/energy_params.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/data copying src/cogent3/data/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/data copying src/cogent3/data/molecular_weight.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/data creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core copying src/cogent3/core/info.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core copying src/cogent3/core/profile.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core copying src/cogent3/core/location.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core copying src/cogent3/core/alignment.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core copying src/cogent3/core/moltype.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core copying src/cogent3/core/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core copying src/cogent3/core/alphabet.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core copying src/cogent3/core/tree.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core copying src/cogent3/core/genetic_code.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core copying src/cogent3/core/sequence.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core copying src/cogent3/core/annotation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/core creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/matrix_exponential_integration.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/distance_transform.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/period_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/simannealingoptimiser.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/geometry.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/matrix_exponentiation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/optimisers.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/period.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/matrix_logarithm.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/scipy_optimize.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/scipy_optimisers.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/solve.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/util.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/markov.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths copying src/cogent3/maths/measure.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/cluster copying src/cogent3/cluster/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/cluster copying src/cogent3/cluster/UPGMA.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/cluster creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/recalculation copying src/cogent3/recalculation/definition.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/recalculation copying src/cogent3/recalculation/calculation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/recalculation copying src/cogent3/recalculation/setting.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/recalculation copying src/cogent3/recalculation/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/recalculation copying src/cogent3/recalculation/scope.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/recalculation creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/distance.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/substitution_calculation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/likelihood_tree.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/best_likelihood.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/coevolution.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/parameter_controller.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/likelihood_tree_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/solved_models.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/pairwise_distance_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/likelihood_calculation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/fast_distance.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/likelihood_function.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/solved_models_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/ns_substitution_model.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/discrete_markov.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/motif_prob_model.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/models.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/bootstrap.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/substitution_model.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/simulate.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve copying src/cogent3/evolve/predicate.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/evolve creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/draw copying src/cogent3/draw/drawable.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/draw copying src/cogent3/draw/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/draw copying src/cogent3/draw/letter.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/draw copying src/cogent3/draw/logo.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/draw copying src/cogent3/draw/dotplot.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/draw copying src/cogent3/draw/dendrogram.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/draw creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app copying src/cogent3/app/io.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app copying src/cogent3/app/dist.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app copying src/cogent3/app/result.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app copying src/cogent3/app/sample.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app copying src/cogent3/app/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app copying src/cogent3/app/data_store.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app copying src/cogent3/app/evo.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app copying src/cogent3/app/align.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app copying src/cogent3/app/tree.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app copying src/cogent3/app/translate.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app copying src/cogent3/app/composable.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/app creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/progressive.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/indel_positions.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/pairwise_seqs_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/pycompare.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/dp_calculation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/traceback.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/indel_model.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/pairwise.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/compare_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/align.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align copying src/cogent3/align/pairwise_pogs_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/align creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/ks.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/test.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/number.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/distribution.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/period.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/kendall.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/information_criteria.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/jackknife.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/contingency.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/special.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.10_cogent3/build/cogent3/maths/stats I: pybuild base:232: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:487: UserWarning: Normalizing '2021.5.7a' to '2021.5.7a0' warnings.warn(tmpl.format(**locals())) running build running build_py creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3 copying src/cogent3/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3 creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/table.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/checkpointing.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/dict_array.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/warning.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/transform.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/progress_display.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/recode_alignment.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/union_dict.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/misc.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/deserialise.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util copying src/cogent3/util/parallel.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/util creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/nj.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/tree_collection.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/maximum_likelihood.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/util.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/tree_space.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/consensus.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo copying src/cogent3/phylo/least_squares.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/phylo creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/fasta.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/phylip.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/table.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/paml.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/alignment.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/bedgraph.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/clustal.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/gde.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/nexus.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format copying src/cogent3/format/util.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/format creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/fasta.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/blast_xml.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/phylip.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/table.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/paml.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/clustal.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/psl.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/unigene.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/record_finder.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/cogent3_json.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/locuslink.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/ncbi_taxonomy.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/blast.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/record.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/genbank.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/gcg.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/rdb.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/nexus.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/gbseq.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/jaspar.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/paml_matrix.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/cigar.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/tree.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/tree_xml.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/newick.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/sequence.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/cisbp.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/tinyseq.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/greengenes.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/gff.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/dialign.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse copying src/cogent3/parse/ebi.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/parse creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data copying src/cogent3/data/energy_params.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data copying src/cogent3/data/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data copying src/cogent3/data/molecular_weight.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/data creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core copying src/cogent3/core/info.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core copying src/cogent3/core/profile.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core copying src/cogent3/core/location.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core copying src/cogent3/core/alignment.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core copying src/cogent3/core/moltype.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core copying src/cogent3/core/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core copying src/cogent3/core/alphabet.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core copying src/cogent3/core/tree.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core copying src/cogent3/core/genetic_code.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core copying src/cogent3/core/sequence.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core copying src/cogent3/core/annotation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/core creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/matrix_exponential_integration.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/distance_transform.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/period_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/simannealingoptimiser.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/geometry.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/matrix_exponentiation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/optimisers.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/period.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/matrix_logarithm.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/scipy_optimize.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/scipy_optimisers.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/solve.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/util.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/markov.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths copying src/cogent3/maths/measure.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster copying src/cogent3/cluster/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster copying src/cogent3/cluster/UPGMA.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/cluster creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation copying src/cogent3/recalculation/definition.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation copying src/cogent3/recalculation/calculation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation copying src/cogent3/recalculation/setting.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation copying src/cogent3/recalculation/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation copying src/cogent3/recalculation/scope.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/recalculation creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/distance.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/substitution_calculation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/likelihood_tree.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/best_likelihood.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/coevolution.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/parameter_controller.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/likelihood_tree_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/solved_models.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/pairwise_distance_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/likelihood_calculation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/fast_distance.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/likelihood_function.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/solved_models_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/ns_substitution_model.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/discrete_markov.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/motif_prob_model.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/models.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/bootstrap.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/substitution_model.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/simulate.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve copying src/cogent3/evolve/predicate.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/evolve creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw copying src/cogent3/draw/drawable.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw copying src/cogent3/draw/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw copying src/cogent3/draw/letter.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw copying src/cogent3/draw/logo.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw copying src/cogent3/draw/dotplot.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw copying src/cogent3/draw/dendrogram.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/draw creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app copying src/cogent3/app/io.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app copying src/cogent3/app/dist.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app copying src/cogent3/app/result.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app copying src/cogent3/app/sample.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app copying src/cogent3/app/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app copying src/cogent3/app/data_store.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app copying src/cogent3/app/evo.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app copying src/cogent3/app/align.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app copying src/cogent3/app/tree.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app copying src/cogent3/app/translate.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app copying src/cogent3/app/composable.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/app creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/progressive.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/indel_positions.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/pairwise_seqs_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/pycompare.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/dp_calculation.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/traceback.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/indel_model.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/pairwise.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/compare_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/align.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align copying src/cogent3/align/pairwise_pogs_numba.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/align creating /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/ks.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/test.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/number.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/distribution.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/__init__.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/period.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/kendall.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/information_criteria.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/jackknife.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/contingency.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats copying src/cogent3/maths/stats/special.py -> /<>/python-cogent-2021.5.7a+dfsg/.pybuild/cpython3_3.9_cogent3/build/cogent3/maths/stats set -x; cd doc; PYTHONPATH=/<>/python-cogent-2021.5.7a+dfsg http_proxy='127.0.0.1:9' /usr/bin/make html + cd doc + PYTHONPATH=/<>/python-cogent-2021.5.7a+dfsg http_proxy=127.0.0.1:9 /usr/bin/make html make[2]: Entering directory '/<>/python-cogent-2021.5.7a+dfsg/doc' sphinx-build -b html -d _build/doctrees . _build/html Running Sphinx v4.2.0 making output directory... done WARNING: html_static_path entry '_static' does not exist WARNING: The config value `today' has type `date', defaults to `str'. Extension error: You must configure the bibtex_bibfiles setting make[2]: *** [Makefile:40: html] Error 2 make[2]: Leaving directory '/<>/python-cogent-2021.5.7a+dfsg/doc' make[1]: *** [debian/rules:33: override_dh_auto_build] Error 2 make[1]: Leaving directory '/<>/python-cogent-2021.5.7a+dfsg' make: *** [debian/rules:20: binary-arch] Error 2 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2021-10-31T13:10:45Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Type: any Build-Space: n/a Build-Time: 16 Distribution: jammy-proposed Fail-Stage: build Host Architecture: arm64 Install-Time: 209 Job: python-cogent_2021.5.7a+dfsg-2.dsc Machine Architecture: arm64 Package: python-cogent Package-Time: 229 Source-Version: 2021.5.7a+dfsg-2 Space: n/a Status: attempted Version: 2021.5.7a+dfsg-2 -------------------------------------------------------------------------------- Finished at 2021-10-31T13:10:45Z Build needed 00:03:49, no disk space E: Build failure (dpkg-buildpackage died) Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=jammy --arch=arm64 PACKAGEBUILD-22303528 Scanning for processes to kill in build PACKAGEBUILD-22303528