https://launchpad.net/ubuntu/+source/python-sqt/0.8.0-3ubuntu1/+build/18622774 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-042 4.4.0-171-generic #200-Ubuntu SMP Tue Dec 3 11:07:23 UTC 2019 aarch64 Buildd toolchain package versions: launchpad-buildd_186 python-lpbuildd_186 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 28 Jan 11:15:41 ntpdate[1901]: adjust time server 10.211.37.1 offset 0.062544 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18622774 --image-type chroot /home/buildd/filecache-default/f005b6164729459c78307140747b338a2f357aa2 Creating target for build PACKAGEBUILD-18622774 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18622774 Starting target for build PACKAGEBUILD-18622774 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18622774 'deb http://ftpmaster.internal/ubuntu focal main universe' 'deb http://ftpmaster.internal/ubuntu focal-security main universe' 'deb http://ftpmaster.internal/ubuntu focal-updates main universe' 'deb http://ftpmaster.internal/ubuntu focal-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-18622774 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18622774 Updating target for build PACKAGEBUILD-18622774 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu focal-security InRelease [79.7 kB] Get:3 http://ftpmaster.internal/ubuntu focal-updates InRelease [79.7 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed InRelease [255 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main armhf Packages [935 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main Translation-en [502 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe armhf Packages [8312 kB] Get:8 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5139 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main armhf Packages [107 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main Translation-en [47.4 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/universe armhf Packages [520 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/universe Translation-en [268 kB] Fetched 16.5 MB in 8s (2038 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libctf-nobfd0 libctf0 libffi7 libhogweed5 libisl22 libnettle7 libperl5.30 perl-modules-5.30 The following packages will be upgraded: apt base-files base-passwd bash binutils binutils-arm-linux-gnueabihf binutils-common bsdutils bzip2 cpp-9 debianutils e2fsprogs fdisk g++-9 gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv gzip hostname libacl1 libapparmor1 libapt-pkg5.90 libasan5 libassuan0 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcryptsetup12 libdebconfclient0 libdevmapper1.02.1 libext2fs2 libfdisk1 libgcc-9-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libgpg-error0 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblz4-1 libmount1 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-9-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev login logsave lsb-base mount ncurses-base ncurses-bin openssl passwd perl perl-base sensible-utils systemd systemd-sysv sysvinit-utils util-linux 101 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. Need to get 56.3 MB of archives. After this operation, 37.3 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main armhf libc6-dev armhf 2.30-0ubuntu3 [1943 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main armhf libc-dev-bin armhf 2.30-0ubuntu3 [63.6 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main armhf linux-libc-dev armhf 5.4.0-12.15 [1085 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main armhf libisl22 armhf 0.22-2 [460 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main armhf libcc1-0 armhf 9.2.1-25ubuntu1 [34.3 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main armhf libctf-nobfd0 armhf 2.33.90.20200122-1ubuntu2 [37.4 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main armhf libctf0 armhf 2.33.90.20200122-1ubuntu2 [37.0 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main armhf binutils-arm-linux-gnueabihf armhf 2.33.90.20200122-1ubuntu2 [2094 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main armhf libbinutils armhf 2.33.90.20200122-1ubuntu2 [318 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main armhf binutils-common armhf 2.33.90.20200122-1ubuntu2 [206 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main armhf binutils armhf 2.33.90.20200122-1ubuntu2 [3372 B] Get:12 http://ftpmaster.internal/ubuntu focal/main armhf gcc-9-base armhf 9.2.1-25ubuntu1 [19.1 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main armhf libgcc1 armhf 1:9.2.1-25ubuntu1 [37.3 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main armhf libgomp1 armhf 9.2.1-25ubuntu1 [77.4 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main armhf libatomic1 armhf 9.2.1-25ubuntu1 [7080 B] Get:16 http://ftpmaster.internal/ubuntu focal/main armhf libasan5 armhf 9.2.1-25ubuntu1 [387 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main armhf libubsan1 armhf 9.2.1-25ubuntu1 [118 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main armhf g++-9 armhf 9.2.1-25ubuntu1 [6685 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main armhf libstdc++-9-dev armhf 9.2.1-25ubuntu1 [1778 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main armhf libgcc-9-dev armhf 9.2.1-25ubuntu1 [686 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main armhf gcc-9 armhf 9.2.1-25ubuntu1 [6537 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main armhf cpp-9 armhf 9.2.1-25ubuntu1 [5875 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main armhf libstdc++6 armhf 9.2.1-25ubuntu1 [451 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main armhf libc6 armhf 2.30-0ubuntu3 [2144 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main armhf base-files armhf 11ubuntu2 [59.8 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main armhf debianutils armhf 4.9.1 [84.6 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main armhf bash armhf 5.0-5ubuntu1 [576 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main armhf bsdutils armhf 1:2.34-0.1ubuntu5 [58.3 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main armhf gzip armhf 1.10-0ubuntu4 [91.1 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main armhf hostname armhf 3.23 [10.4 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main armhf login armhf 1:4.8-1ubuntu1 [217 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main armhf ncurses-bin armhf 6.1+20191019-1ubuntu1 [163 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main armhf perl-modules-5.30 all 5.30.0-9 [2739 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main armhf libperl5.30 armhf 5.30.0-9 [3286 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main armhf perl armhf 5.30.0-9 [224 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main armhf perl-base armhf 5.30.0-9 [1408 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main armhf bzip2 armhf 1.0.8-2 [32.4 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main armhf libbz2-1.0 armhf 1.0.8-2 [31.0 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main armhf libblkid1 armhf 2.34-0.1ubuntu5 [125 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main armhf libuuid1 armhf 2.34-0.1ubuntu5 [19.7 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main armhf libfdisk1 armhf 2.34-0.1ubuntu5 [163 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main armhf libpcre2-8-0 armhf 10.34-7 [172 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main armhf libselinux1 armhf 3.0-1 [60.1 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main armhf libmount1 armhf 2.34-0.1ubuntu5 [135 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main armhf libncurses6 armhf 6.1+20191019-1ubuntu1 [79.7 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main armhf libtinfo6 armhf 6.1+20191019-1ubuntu1 [72.8 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main armhf libncursesw6 armhf 6.1+20191019-1ubuntu1 [106 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main armhf libsmartcols1 armhf 2.34-0.1ubuntu5 [89.1 kB] Get:49 http://ftpmaster.internal/ubuntu focal/main armhf fdisk armhf 2.34-0.1ubuntu5 [109 kB] Get:50 http://ftpmaster.internal/ubuntu focal/main armhf util-linux armhf 2.34-0.1ubuntu5 [957 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main armhf libdebconfclient0 armhf 0.250ubuntu2 [5776 B] Get:52 http://ftpmaster.internal/ubuntu focal/main armhf base-passwd armhf 3.5.47 [46.4 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main armhf libc-bin armhf 2.30-0ubuntu3 [496 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main armhf ncurses-base all 6.1+20191019-1ubuntu1 [17.9 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main armhf lsb-base all 11.1.0ubuntu2 [12.1 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main armhf sysvinit-utils armhf 2.96-1ubuntu1 [19.2 kB] Get:57 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libgpg-error0 armhf 1.36-7build1 [49.8 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main armhf libgcrypt20 armhf 1.8.5-3ubuntu1 [364 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main armhf liblz4-1 armhf 1.9.2-2 [51.7 kB] Get:60 http://ftpmaster.internal/ubuntu focal/main armhf systemd-sysv armhf 244.1-0ubuntu2 [9364 B] Get:61 http://ftpmaster.internal/ubuntu focal/main armhf libacl1 armhf 2.2.53-5ubuntu1 [15.8 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main armhf libapparmor1 armhf 2.13.3-7ubuntu1 [29.4 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main armhf libaudit-common all 1:2.8.5-2ubuntu5 [4076 B] Get:64 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libcap-ng0 armhf 0.7.9-2.1build1 [9688 B] Get:65 http://ftpmaster.internal/ubuntu focal/main armhf libaudit1 armhf 1:2.8.5-2ubuntu5 [35.9 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main armhf libcap2 armhf 1:2.27-1 [12.7 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main armhf libudev1 armhf 244.1-0ubuntu2 [69.1 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main armhf libdevmapper1.02.1 armhf 2:1.02.155-2ubuntu8 [118 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main armhf libjson-c4 armhf 0.13.1+dfsg-6 [25.6 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main armhf libssl1.1 armhf 1.1.1d-2ubuntu3 [1080 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main armhf libcryptsetup12 armhf 2:2.2.2-1ubuntu1 [163 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main armhf libnettle7 armhf 3.5.1+really3.5.1-2 [126 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main armhf libhogweed5 armhf 3.5.1+really3.5.1-2 [127 kB] Get:74 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libffi7 armhf 3.3-3 [16.5 kB] Get:75 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libp11-kit0 armhf 0.23.19-2 [169 kB] Get:76 http://ftpmaster.internal/ubuntu focal/main armhf libtasn1-6 armhf 4.15.0-2 [33.0 kB] Get:77 http://ftpmaster.internal/ubuntu focal/main armhf libgnutls30 armhf 3.6.11.1-2ubuntu2 [733 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main armhf libkmod2 armhf 26-3ubuntu1 [37.0 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main armhf libpam0g armhf 1.3.1-5ubuntu4 [49.6 kB] Get:80 http://ftpmaster.internal/ubuntu focal/main armhf libseccomp2 armhf 2.4.2-2ubuntu2 [32.5 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main armhf mount armhf 2.34-0.1ubuntu5 [108 kB] Get:82 http://ftpmaster.internal/ubuntu focal/main armhf systemd armhf 244.1-0ubuntu2 [3533 kB] Get:83 http://ftpmaster.internal/ubuntu focal/main armhf libsystemd0 armhf 244.1-0ubuntu2 [240 kB] Get:84 http://ftpmaster.internal/ubuntu focal/main armhf libzstd1 armhf 1.4.4+dfsg-1 [207 kB] Get:85 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libapt-pkg5.90 armhf 1.9.8 [774 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main armhf gpgv armhf 2.2.17-3ubuntu1 [170 kB] Get:87 http://ftpmaster.internal/ubuntu focal-proposed/main armhf apt armhf 1.9.8 [1236 kB] Get:88 http://ftpmaster.internal/ubuntu focal/main armhf libpam-modules-bin armhf 1.3.1-5ubuntu4 [33.8 kB] Get:89 http://ftpmaster.internal/ubuntu focal/main armhf libpam-modules armhf 1.3.1-5ubuntu4 [232 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main armhf logsave armhf 1.45.3-4ubuntu3 [9172 B] Get:91 http://ftpmaster.internal/ubuntu focal/main armhf libext2fs2 armhf 1.45.3-4ubuntu3 [168 kB] Get:92 http://ftpmaster.internal/ubuntu focal/main armhf e2fsprogs armhf 1.45.3-4ubuntu3 [506 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main armhf libattr1 armhf 1:2.4.48-5 [11.5 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main armhf libpam-runtime all 1.3.1-5ubuntu4 [37.3 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main armhf libsepol1 armhf 3.0-1 [220 kB] Get:96 http://ftpmaster.internal/ubuntu focal/main armhf libsemanage-common all 3.0-1 [9880 B] Get:97 http://ftpmaster.internal/ubuntu focal/main armhf libsemanage1 armhf 3.0-1 [73.9 kB] Get:98 http://ftpmaster.internal/ubuntu focal/main armhf passwd armhf 1:4.8-1ubuntu1 [748 kB] Get:99 http://ftpmaster.internal/ubuntu focal/main armhf libcom-err2 armhf 1.45.3-4ubuntu3 [8164 B] Get:100 http://ftpmaster.internal/ubuntu focal/main armhf libss2 armhf 1.45.3-4ubuntu3 [9384 B] Get:101 http://ftpmaster.internal/ubuntu focal/main armhf sensible-utils all 0.0.12+nmu1 [15.0 kB] Get:102 http://ftpmaster.internal/ubuntu focal/main armhf libsqlite3-0 armhf 3.30.1-1ubuntu1 [460 kB] Get:103 http://ftpmaster.internal/ubuntu focal/main armhf openssl armhf 1.1.1d-2ubuntu3 [595 kB] Get:104 http://ftpmaster.internal/ubuntu focal/main armhf libassuan0 armhf 2.5.3-7ubuntu2 [29.1 kB] Get:105 http://ftpmaster.internal/ubuntu focal/main armhf gpg armhf 2.2.17-3ubuntu1 [421 kB] Get:106 http://ftpmaster.internal/ubuntu focal/main armhf gpgconf armhf 2.2.17-3ubuntu1 [107 kB] Get:107 http://ftpmaster.internal/ubuntu focal/main armhf gpg-agent armhf 2.2.17-3ubuntu1 [195 kB] Get:108 http://ftpmaster.internal/ubuntu focal/main armhf liblockfile-bin armhf 1.16-1.1 [10.5 kB] Get:109 http://ftpmaster.internal/ubuntu focal/main armhf liblockfile1 armhf 1.16-1.1 [5620 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 56.3 MB in 5s (11.9 MB/s) (Reading database ... 12487 files and directories currently installed.) 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Setting up gpgconf (2.2.17-3ubuntu1) ... Setting up libperl5.30:armhf (5.30.0-9) ... Setting up libisl22:armhf (0.22-2) ... Setting up liblockfile1:armhf (1.16-1.1) ... Setting up libjson-c4:armhf (0.13.1+dfsg-6) ... Setting up libbinutils:armhf (2.33.90.20200122-1ubuntu2) ... Setting up libc-dev-bin (2.30-0ubuntu3) ... Setting up openssl (1.1.1d-2ubuntu3) ... Setting up libcc1-0:armhf (9.2.1-25ubuntu1) ... Setting up gpg (2.2.17-3ubuntu1) ... Setting up libkmod2:armhf (26-3ubuntu1) ... Setting up libctf0:armhf (2.33.90.20200122-1ubuntu2) ... Setting up gpg-agent (2.2.17-3ubuntu1) ... Installing new version of config file /etc/logcheck/ignore.d.server/gpg-agent ... Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket -> /usr/lib/systemd/user/gpg-agent-browser.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket -> /usr/lib/systemd/user/gpg-agent-extra.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket -> /usr/lib/systemd/user/gpg-agent-ssh.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent.socket -> /usr/lib/systemd/user/gpg-agent.socket. Setting up e2fsprogs (1.45.3-4ubuntu3) ... Setting up libgcc-9-dev:armhf (9.2.1-25ubuntu1) ... Setting up perl (5.30.0-9) ... Setting up cpp-9 (9.2.1-25ubuntu1) ... Setting up libc6-dev:armhf (2.30-0ubuntu3) ... Setting up libcryptsetup12:armhf (2:2.2.2-1ubuntu1) ... Setting up binutils-arm-linux-gnueabihf (2.33.90.20200122-1ubuntu2) ... Setting up libstdc++-9-dev:armhf (9.2.1-25ubuntu1) ... Setting up systemd (244.1-0ubuntu2) ... Installing new version of config file /etc/dhcp/dhclient-enter-hooks.d/resolved ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from KVM UUID. Setting up binutils (2.33.90.20200122-1ubuntu2) ... Setting up gcc-9 (9.2.1-25ubuntu1) ... Setting up systemd-sysv (244.1-0ubuntu2) ... Setting up g++-9 (9.2.1-25ubuntu1) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18622774 armhf focal-proposed -c chroot:build-PACKAGEBUILD-18622774 --arch=armhf --dist=focal-proposed --nolog python-sqt_0.8.0-3ubuntu1.dsc Initiating build PACKAGEBUILD-18622774 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-171-generic #200-Ubuntu SMP Tue Dec 3 11:07:23 UTC 2019 armv7l sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-042.buildd +==============================================================================+ | python-sqt 0.8.0-3ubuntu1 (armhf) 28 Jan 2020 11:16 | +==============================================================================+ Package: python-sqt Version: 0.8.0-3ubuntu1 Source Version: 0.8.0-3ubuntu1 Distribution: focal-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/python-sqt-sANE04/python-sqt-0.8.0' with '<>' I: NOTICE: Log filtering will replace 'build/python-sqt-sANE04' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18622774/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- python-sqt_0.8.0-3ubuntu1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-b2y028/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-b2y028/apt_archive ./ InRelease Get:2 copy:/<>/resolver-b2y028/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-b2y028/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-b2y028/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-b2y028/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (86.9 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-b2y028/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (68.5 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14403 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 12~), dh-python, python3-all-dev, python3-setuptools, cython3, python3-nose, python3-cutadapt, python3-pysam, python3-seaborn, python3-xopen Filtered Build-Depends: debhelper (>= 12~), dh-python, python3-all-dev, python3-setuptools, cython3, python3-nose, python3-cutadapt, python3-pysam, python3-seaborn, python3-xopen dpkg-deb: building package 'sbuild-build-depends-python-sqt-dummy' in '/<>/resolver-F_wzBt/apt_archive/sbuild-build-depends-python-sqt-dummy.deb'. Ign:1 copy:/<>/resolver-F_wzBt/apt_archive ./ InRelease Get:2 copy:/<>/resolver-F_wzBt/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-F_wzBt/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-F_wzBt/apt_archive ./ Sources [267 B] Get:5 copy:/<>/resolver-F_wzBt/apt_archive ./ Packages [585 B] Fetched 2971 B in 0s (88.4 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install python-sqt build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev blt bsdmainutils cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file fontconfig-config fonts-lyx gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasn1-8-heimdal libblas3 libbrotli1 libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5 libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts3 libhx509-5-heimdal libicu63 libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libmpdec2 libnghttp2-14 libpipeline1 libpsl5 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtcl8.6 libtk8.6 libtool libuchardet0 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 m4 man-db mime-support pigz po-debconf python-matplotlib-data python3 python3-all python3-all-dev python3-cutadapt python3-cycler python3-dateutil python3-decorator python3-dev python3-distutils python3-dnaio python3-kiwisolver python3-lib2to3 python3-matplotlib python3-minimal python3-nose python3-numpy python3-pandas python3-pandas-lib python3-pkg-resources python3-pyparsing python3-pysam python3-scipy python3-seaborn python3-setuptools python3-six python3-tk python3-tz python3-xopen python3.7 python3.7-dev python3.7-minimal python3.8 python3.8-dev python3.8-minimal tk8.6-blt2.5 ttf-bitstream-vera ucf x11-common zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc blt-demo wamerican | wordlist whois vacation cython-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff krb5-doc krb5-user libjs-jquery-ui-docs tcl8.6 tk8.6 libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-venv python-cycler-doc dvipng ffmpeg gir1.2-gtk-3.0 ghostscript inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-pyqt4 python3-sip python3-tornado texlive-extra-utils texlive-latex-extra ttf-staypuft python-nose-doc gfortran python-numpy-doc python3-pytest python3-numpy-dbg python-pandas-doc python3-statsmodels python-pyparsing-doc python-scipy-doc python-setuptools-doc tix python3-tk-dbg python3.7-venv python3.7-doc binfmt-support python3.8-venv python3.8-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common krb5-locales publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl python3-pil python3-numexpr python3-tables python3-xlrd python3-openpyxl python3-xlwt python3-bs4 python3-html5lib python3-lxml python3-patsy The following NEW packages will be installed: autoconf automake autopoint autotools-dev blt bsdmainutils cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file fontconfig-config fonts-lyx gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasn1-8-heimdal libblas3 libbrotli1 libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5 libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts3 libhx509-5-heimdal libicu63 libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libmpdec2 libnghttp2-14 libpipeline1 libpsl5 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtcl8.6 libtk8.6 libtool libuchardet0 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 m4 man-db mime-support pigz po-debconf python-matplotlib-data python3 python3-all python3-all-dev python3-cutadapt python3-cycler python3-dateutil python3-decorator python3-dev python3-distutils python3-dnaio python3-kiwisolver python3-lib2to3 python3-matplotlib python3-minimal python3-nose python3-numpy python3-pandas python3-pandas-lib python3-pkg-resources python3-pyparsing python3-pysam python3-scipy python3-seaborn python3-setuptools python3-six python3-tk python3-tz python3-xopen python3.7 python3.7-dev python3.7-minimal python3.8 python3.8-dev python3.8-minimal sbuild-build-depends-python-sqt-dummy tk8.6-blt2.5 ttf-bitstream-vera ucf x11-common zlib1g-dev 0 upgraded, 140 newly installed, 0 to remove and 0 not upgraded. Need to get 83.2 MB of archives. After this operation, 326 MB of additional disk space will be used. Get:1 copy:/<>/resolver-F_wzBt/apt_archive ./ sbuild-build-depends-python-sqt-dummy 0.invalid.0 [912 B] Get:2 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3.8-minimal armhf 3.8.1-2ubuntu3 [697 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main armhf libexpat1 armhf 2.2.9-1 [53.2 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3.8-minimal armhf 3.8.1-2ubuntu3 [1577 kB] Get:5 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3-minimal armhf 3.8.0-3 [23.4 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main armhf mime-support all 3.64ubuntu1 [30.6 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main armhf libmpdec2 armhf 2.4.2-2 [66.4 kB] Get:8 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3.8-stdlib armhf 3.8.1-2ubuntu3 [1612 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3.8 armhf 3.8.1-2ubuntu3 [360 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3-stdlib armhf 3.8.0-3 [6904 B] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3 armhf 3.8.0-3 [47.6 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3.7-minimal armhf 3.7.6-1ubuntu2 [541 kB] Get:13 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3.7-minimal armhf 3.7.6-1ubuntu2 [1350 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main armhf libbsd0 armhf 0.10.0-1 [49.8 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main armhf bsdmainutils armhf 11.1.2ubuntu2 [176 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main armhf libuchardet0 armhf 0.0.6-3 [62.1 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main armhf groff-base armhf 1.22.4-4 [777 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main armhf libpipeline1 armhf 1.5.2-2 [23.5 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main armhf man-db armhf 2.9.0-2 [1079 kB] Get:20 http://ftpmaster.internal/ubuntu focal/universe armhf pigz armhf 2.4-1 [53.0 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main armhf libmagic-mgc armhf 1:5.38-4 [218 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main armhf libmagic1 armhf 1:5.38-4 [68.3 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main armhf file armhf 1:5.38-4 [22.4 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main armhf libelf1 armhf 0.176-1.1build1 [41.3 kB] Get:25 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libglib2.0-0 armhf 2.63.3-3 [1117 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main armhf libicu63 armhf 63.2-2 [8002 kB] Get:27 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3.7-stdlib armhf 3.7.6-1ubuntu2 [1688 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main armhf libxml2 armhf 2.9.4+dfsg1-8ubuntu3 [554 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main armhf python3-pkg-resources all 44.0.0-1 [100 kB] Get:30 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3-six all 1.14.0-2 [12.1 kB] Get:31 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3.7 armhf 3.7.6-1ubuntu2 [304 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main armhf ucf all 3.0038+nmu1 [51.6 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main armhf gettext-base armhf 0.19.8.1-10 [46.2 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main armhf libkrb5support0 armhf 1.17-6ubuntu3 [28.1 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main armhf libk5crypto3 armhf 1.17-6ubuntu3 [79.5 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main armhf libkeyutils1 armhf 1.6-6ubuntu1 [9172 B] Get:37 http://ftpmaster.internal/ubuntu focal/main armhf libkrb5-3 armhf 1.17-6ubuntu3 [287 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main armhf libgssapi-krb5-2 armhf 1.17-6ubuntu3 [101 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main armhf libpsl5 armhf 0.20.2-2 [48.7 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main armhf libxau6 armhf 1:1.0.9-0ubuntu1 [6612 B] Get:41 http://ftpmaster.internal/ubuntu focal/main armhf libxdmcp6 armhf 1:1.1.3-0ubuntu1 [9160 B] Get:42 http://ftpmaster.internal/ubuntu focal/main armhf libxcb1 armhf 1.13.1-3build1 [41.8 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main armhf libx11-data all 2:1.6.8-1 [113 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main armhf libx11-6 armhf 2:1.6.8-1 [517 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main armhf libxext6 armhf 2:1.3.4-0ubuntu1 [24.2 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main armhf libsigsegv2 armhf 2.12-2 [13.1 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main armhf m4 armhf 1.4.18-4 [187 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main armhf autoconf all 2.69-11.1 [321 kB] Get:49 http://ftpmaster.internal/ubuntu focal/main armhf autotools-dev all 20180224.1 [39.6 kB] Get:50 http://ftpmaster.internal/ubuntu focal-proposed/main armhf automake all 1:1.16.1-4ubuntu4 [522 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main armhf autopoint all 0.19.8.1-10 [412 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [798 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main armhf libfreetype6 armhf 2.10.1-2 [283 kB] Get:54 http://ftpmaster.internal/ubuntu focal/universe armhf ttf-bitstream-vera all 1.10-8 [352 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main armhf fontconfig-config all 2.13.1-2ubuntu2 [28.9 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main armhf libfontconfig1 armhf 2.13.1-2ubuntu2 [95.8 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main armhf libxrender1 armhf 1:0.9.10-1 [15.6 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main armhf libxft2 armhf 2.3.3-0ubuntu1 [32.5 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main armhf x11-common all 1:7.7+19ubuntu13 [22.4 kB] Get:60 http://ftpmaster.internal/ubuntu focal/main armhf libxss1 armhf 1:1.2.3-1 [7512 B] Get:61 http://ftpmaster.internal/ubuntu focal/main armhf libtk8.6 armhf 8.6.10-1 [630 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-4 [469 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main armhf blt armhf 2.5.3+dfsg-4 [4944 B] Get:64 http://ftpmaster.internal/ubuntu focal/universe armhf cython3 armhf 0.29.14-0.1ubuntu2 [1913 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main armhf libtool all 2.4.6-11 [194 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main armhf dh-autoreconf all 19 [16.1 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main armhf libdebhelper-perl all 12.7.3ubuntu1 [52.1 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main armhf libarchive-zip-perl all 1.67-1 [90.4 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main armhf libsub-override-perl all 0.09-2 [9532 B] Get:70 http://ftpmaster.internal/ubuntu focal/main armhf libfile-stripnondeterminism-perl all 1.6.3-2 [16.0 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main armhf dh-strip-nondeterminism all 1.6.3-2 [5228 B] Get:72 http://ftpmaster.internal/ubuntu focal/main armhf dwz armhf 0.13-5 [153 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main armhf libcroco3 armhf 0.6.13-1 [70.5 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main armhf gettext armhf 0.19.8.1-10 [836 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main armhf intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:76 http://ftpmaster.internal/ubuntu focal/main armhf po-debconf all 1.0.21 [233 kB] Get:77 http://ftpmaster.internal/ubuntu focal/main armhf debhelper all 12.7.3ubuntu1 [896 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main armhf python3-lib2to3 all 3.8.0-1 [75.6 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main armhf python3-distutils all 3.8.0-1 [142 kB] Get:80 http://ftpmaster.internal/ubuntu focal/main armhf dh-python all 4.20191017ubuntu4 [88.2 kB] Get:81 http://ftpmaster.internal/ubuntu focal/universe armhf fonts-lyx all 2.3.3-3 [154 kB] Get:82 http://ftpmaster.internal/ubuntu focal/main armhf libroken18-heimdal armhf 7.7.0+dfsg-1 [34.7 kB] Get:83 http://ftpmaster.internal/ubuntu focal/main armhf libasn1-8-heimdal armhf 7.7.0+dfsg-1 [140 kB] Get:84 http://ftpmaster.internal/ubuntu focal/main armhf libblas3 armhf 3.9.0-1 [102 kB] Get:85 http://ftpmaster.internal/ubuntu focal/main armhf libbrotli1 armhf 1.0.7-6 [268 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main armhf libheimbase1-heimdal armhf 7.7.0+dfsg-1 [24.4 kB] Get:87 http://ftpmaster.internal/ubuntu focal/main armhf libhcrypto4-heimdal armhf 7.7.0+dfsg-1 [78.5 kB] Get:88 http://ftpmaster.internal/ubuntu focal/main armhf libwind0-heimdal armhf 7.7.0+dfsg-1 [46.9 kB] Get:89 http://ftpmaster.internal/ubuntu focal/main armhf libhx509-5-heimdal armhf 7.7.0+dfsg-1 [88.7 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main armhf libkrb5-26-heimdal armhf 7.7.0+dfsg-1 [170 kB] Get:91 http://ftpmaster.internal/ubuntu focal/main armhf libheimntlm0-heimdal armhf 7.7.0+dfsg-1 [13.2 kB] Get:92 http://ftpmaster.internal/ubuntu focal/main armhf libgssapi3-heimdal armhf 7.7.0+dfsg-1 [80.0 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2 [13.4 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main armhf libsasl2-2 armhf 2.1.27+dfsg-2 [42.7 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main armhf libldap-common all 2.4.48+dfsg-1ubuntu4 [16.9 kB] Get:96 http://ftpmaster.internal/ubuntu focal/main armhf libldap-2.4-2 armhf 2.4.48+dfsg-1ubuntu4 [133 kB] Get:97 http://ftpmaster.internal/ubuntu focal/main armhf libnghttp2-14 armhf 1.40.0-1 [68.0 kB] Get:98 http://ftpmaster.internal/ubuntu focal/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build1 [49.1 kB] Get:99 http://ftpmaster.internal/ubuntu focal/main armhf libssh-4 armhf 0.9.3-2ubuntu1 [147 kB] Get:100 http://ftpmaster.internal/ubuntu focal/main armhf libcurl3-gnutls armhf 7.66.0-1ubuntu1 [200 kB] Get:101 http://ftpmaster.internal/ubuntu focal/universe armhf libdeflate0 armhf 1.5-1 [71.4 kB] Get:102 http://ftpmaster.internal/ubuntu focal/main armhf libexpat1-dev armhf 2.2.9-1 [99.9 kB] Get:103 http://ftpmaster.internal/ubuntu focal/main armhf libgfortran5 armhf 9.2.1-25ubuntu1 [252 kB] Get:104 http://ftpmaster.internal/ubuntu focal-proposed/universe armhf libhts3 armhf 1.10.2-2 [316 kB] Get:105 http://ftpmaster.internal/ubuntu focal/main armhf libjs-jquery all 3.3.1~dfsg-3 [329 kB] Get:106 http://ftpmaster.internal/ubuntu focal/universe armhf libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get:107 http://ftpmaster.internal/ubuntu focal/main armhf liblapack3 armhf 3.9.0-1 [1733 kB] Get:108 http://ftpmaster.internal/ubuntu focal/universe armhf liblbfgsb0 armhf 3.0+dfsg.3-7 [26.2 kB] Get:109 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3.8 armhf 3.8.1-2ubuntu3 [1390 kB] Get:110 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3.8-dev armhf 3.8.1-2ubuntu3 [3127 kB] Get:111 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3-dev armhf 3.8.0-3 [7076 B] Get:112 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3.7 armhf 3.7.6-1ubuntu2 [1276 kB] Get:113 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3.7-dev armhf 3.7.6-1ubuntu2 [2767 kB] Get:114 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libpython3-all-dev armhf 3.8.0-3 [1120 B] Get:115 http://ftpmaster.internal/ubuntu focal/universe armhf python-matplotlib-data all 3.0.2-2ubuntu1 [3775 kB] Get:116 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3-all armhf 3.8.0-3 [1112 B] Get:117 http://ftpmaster.internal/ubuntu focal/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1ubuntu3 [166 kB] Get:118 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3.8-dev armhf 3.8.1-2ubuntu3 [515 kB] Get:119 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3-dev armhf 3.8.0-3 [1212 B] Get:120 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3.7-dev armhf 3.7.6-1ubuntu2 [518 kB] Get:121 http://ftpmaster.internal/ubuntu focal-proposed/main armhf python3-all-dev armhf 3.8.0-3 [1124 B] Get:122 http://ftpmaster.internal/ubuntu focal/universe armhf python3-xopen all 0.8.4-1 [9524 B] Get:123 http://ftpmaster.internal/ubuntu focal-proposed/universe armhf python3-dnaio armhf 0.4.1-1build1 [94.9 kB] Get:124 http://ftpmaster.internal/ubuntu focal-proposed/universe armhf python3-cutadapt armhf 2.8-1build1 [108 kB] Get:125 http://ftpmaster.internal/ubuntu focal/universe armhf python3-cycler all 0.10.0-2 [8024 B] Get:126 http://ftpmaster.internal/ubuntu focal/main armhf python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] Get:127 http://ftpmaster.internal/ubuntu focal/main armhf python3-decorator all 4.3.0-1.1build1 [9652 B] Get:128 http://ftpmaster.internal/ubuntu focal/universe armhf python3-kiwisolver armhf 1.0.1-2build3 [73.9 kB] Get:129 http://ftpmaster.internal/ubuntu focal/main armhf python3-pyparsing all 2.4.2-1 [58.8 kB] Get:130 http://ftpmaster.internal/ubuntu focal/main armhf python3-numpy armhf 1:1.17.4-5ubuntu2 [4211 kB] Get:131 http://ftpmaster.internal/ubuntu focal/universe armhf python3-matplotlib armhf 3.0.2-2ubuntu1 [4508 kB] Get:132 http://ftpmaster.internal/ubuntu focal/universe armhf python3-nose all 1.3.7-4build1 [116 kB] Get:133 http://ftpmaster.internal/ubuntu focal/main armhf python3-tz all 2019.3-1 [24.4 kB] Get:134 http://ftpmaster.internal/ubuntu focal/universe armhf python3-pandas-lib armhf 0.25.3+dfsg-4 [7366 kB] Get:135 http://ftpmaster.internal/ubuntu focal/universe armhf python3-pandas all 0.25.3+dfsg-4 [1967 kB] Get:136 http://ftpmaster.internal/ubuntu focal-proposed/universe armhf python3-pysam armhf 0.15.4+ds-1 [2451 kB] Get:137 http://ftpmaster.internal/ubuntu focal/universe armhf python3-scipy armhf 1.3.3-3 [12.0 MB] Get:138 http://ftpmaster.internal/ubuntu focal/main armhf python3-tk armhf 3.8.0-1 [105 kB] Get:139 http://ftpmaster.internal/ubuntu focal/universe armhf python3-seaborn all 0.9.0-2 [158 kB] Get:140 http://ftpmaster.internal/ubuntu focal/main armhf python3-setuptools all 44.0.0-1 [257 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 83.2 MB in 9s (9357 kB/s) Selecting previously unselected package libpython3.8-minimal:armhf. (Reading database ... 14403 files and directories currently installed.) Preparing to unpack .../libpython3.8-minimal_3.8.1-2ubuntu3_armhf.deb ... Unpacking libpython3.8-minimal:armhf (3.8.1-2ubuntu3) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.2.9-1_armhf.deb ... Unpacking libexpat1:armhf (2.2.9-1) ... Selecting previously unselected package python3.8-minimal. Preparing to unpack .../python3.8-minimal_3.8.1-2ubuntu3_armhf.deb ... Unpacking python3.8-minimal (3.8.1-2ubuntu3) ... Setting up libpython3.8-minimal:armhf (3.8.1-2ubuntu3) ... Setting up libexpat1:armhf (2.2.9-1) ... Setting up python3.8-minimal (3.8.1-2ubuntu3) ... Selecting previously unselected package python3-minimal. (Reading database ... 14694 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.8.0-3_armhf.deb ... Unpacking python3-minimal (3.8.0-3) ... Selecting previously unselected package mime-support. 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Setting up python3-minimal (3.8.0-3) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Selecting previously unselected package python3. (Reading database ... 15096 files and directories currently installed.) Preparing to unpack .../000-python3_3.8.0-3_armhf.deb ... Unpacking python3 (3.8.0-3) ... Selecting previously unselected package libpython3.7-minimal:armhf. Preparing to unpack .../001-libpython3.7-minimal_3.7.6-1ubuntu2_armhf.deb ... Unpacking libpython3.7-minimal:armhf (3.7.6-1ubuntu2) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../002-python3.7-minimal_3.7.6-1ubuntu2_armhf.deb ... Unpacking python3.7-minimal (3.7.6-1ubuntu2) ... Selecting previously unselected package libbsd0:armhf. Preparing to unpack .../003-libbsd0_0.10.0-1_armhf.deb ... Unpacking libbsd0:armhf (0.10.0-1) ... 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Selecting previously unselected package libkrb5-26-heimdal:armhf. Preparing to unpack .../079-libkrb5-26-heimdal_7.7.0+dfsg-1_armhf.deb ... Unpacking libkrb5-26-heimdal:armhf (7.7.0+dfsg-1) ... Selecting previously unselected package libheimntlm0-heimdal:armhf. Preparing to unpack .../080-libheimntlm0-heimdal_7.7.0+dfsg-1_armhf.deb ... Unpacking libheimntlm0-heimdal:armhf (7.7.0+dfsg-1) ... Selecting previously unselected package libgssapi3-heimdal:armhf. Preparing to unpack .../081-libgssapi3-heimdal_7.7.0+dfsg-1_armhf.deb ... Unpacking libgssapi3-heimdal:armhf (7.7.0+dfsg-1) ... Selecting previously unselected package libsasl2-modules-db:armhf. Preparing to unpack .../082-libsasl2-modules-db_2.1.27+dfsg-2_armhf.deb ... Unpacking libsasl2-modules-db:armhf (2.1.27+dfsg-2) ... Selecting previously unselected package libsasl2-2:armhf. Preparing to unpack .../083-libsasl2-2_2.1.27+dfsg-2_armhf.deb ... Unpacking libsasl2-2:armhf (2.1.27+dfsg-2) ... 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Unpacking python3-setuptools (44.0.0-1) ... Selecting previously unselected package sbuild-build-depends-python-sqt-dummy. Preparing to unpack .../130-sbuild-build-depends-python-sqt-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-python-sqt-dummy (0.invalid.0) ... Setting up libpipeline1:armhf (1.5.2-2) ... Setting up libxau6:armhf (1:1.0.9-0ubuntu1) ... Setting up libkeyutils1:armhf (1.6-6ubuntu1) ... Setting up libpsl5:armhf (0.20.2-2) ... Setting up ttf-bitstream-vera (1.10-8) ... Setting up mime-support (3.64ubuntu1) ... Setting up libmagic-mgc (1:5.38-4) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:armhf (2.63.3-3) ... No schema files found: doing nothing. Setting up fonts-lyx (2.3.3-3) ... Setting up libdebhelper-perl (12.7.3ubuntu1) ... Setting up libbrotli1:armhf (1.0.7-6) ... Setting up x11-common (1:7.7+19ubuntu13) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libnghttp2-14:armhf (1.40.0-1) ... Setting up libmagic1:armhf (1:5.38-4) ... Setting up libdeflate0 (1.5-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-4) ... Setting up libldap-common (2.4.48+dfsg-1ubuntu4) ... Setting up libpython3.7-minimal:armhf (3.7.6-1ubuntu2) ... Setting up libicu63:armhf (63.2-2) ... Setting up libkrb5support0:armhf (1.17-6ubuntu3) ... Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-2) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:armhf (3.9.0-1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libexpat1-dev:armhf (2.2.9-1) ... Setting up libfreetype6:armhf (2.10.1-2) ... Setting up libx11-data (2:1.6.8-1) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2build1) ... Setting up libsigsegv2:armhf (2.12-2) ... Setting up libtcl8.6:armhf (8.6.10+dfsg-1) ... Setting up autopoint (0.19.8.1-10) ... Setting up ucf (3.0038+nmu1) ... Setting up libk5crypto3:armhf (1.17-6ubuntu3) ... Setting up python3.7-minimal (3.7.6-1ubuntu2) ... Setting up libsasl2-2:armhf (2.1.27+dfsg-2) ... Setting up libgfortran5:armhf (9.2.1-25ubuntu1) ... Setting up libroken18-heimdal:armhf (7.7.0+dfsg-1) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1ubuntu3) ... Setting up pigz (2.4-1) ... Setting up libuchardet0:armhf (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libkrb5-3:armhf (1.17-6ubuntu3) ... Setting up libmpdec2:armhf (2.4.2-2) ... Setting up libjs-jquery (3.3.1~dfsg-3) ... Setting up libpython3.8-stdlib:armhf (3.8.1-2ubuntu3) ... Setting up python3.8 (3.8.1-2ubuntu3) ... Setting up python-matplotlib-data (3.0.2-2ubuntu1) ... Setting up libbsd0:armhf (0.10.0-1) ... Setting up libelf1:armhf (0.176-1.1build1) ... Setting up libxml2:armhf (2.9.4+dfsg1-8ubuntu3) ... Setting up libpython3-stdlib:armhf (3.8.0-3) ... Setting up libheimbase1-heimdal:armhf (7.7.0+dfsg-1) ... Setting up libfile-stripnondeterminism-perl (1.6.3-2) ... Setting up libxdmcp6:armhf (1:1.1.3-0ubuntu1) ... Setting up libpython3.7-stdlib:armhf (3.7.6-1ubuntu2) ... Setting up liblapack3:armhf (3.9.0-1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libxcb1:armhf (1.13.1-3build1) ... Setting up libpython3.7:armhf (3.7.6-1ubuntu2) ... Setting up libtool (2.4.6-11) ... Setting up fontconfig-config (2.13.1-2ubuntu2) ... Setting up libpython3.7-dev:armhf (3.7.6-1ubuntu2) ... Setting up libasn1-8-heimdal:armhf (7.7.0+dfsg-1) ... Setting up m4 (1.4.18-4) ... Setting up python3 (3.8.0-3) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libhcrypto4-heimdal:armhf (7.7.0+dfsg-1) ... Setting up python3-tz (2019.3-1) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up python3-six (1.14.0-2) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up python3-decorator (4.3.0-1.1build1) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libwind0-heimdal:armhf (7.7.0+dfsg-1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up python3-pyparsing (2.4.2-1) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libpython3.8:armhf (3.8.1-2ubuntu3) ... Setting up python3-cycler (0.10.0-2) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:armhf (1.17-6ubuntu3) ... Setting up cython3 (0.29.14-0.1ubuntu2) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libcroco3:armhf (0.6.13-1) ... Setting up libssh-4:armhf (0.9.3-2ubuntu1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up libx11-6:armhf (2:1.6.8-1) ... Setting up python3-dateutil (2.7.3-3ubuntu1) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libfontconfig1:armhf (2.13.1-2ubuntu2) ... Setting up python3-lib2to3 (3.8.0-1) ... Setting up liblbfgsb0:armhf (3.0+dfsg.3-7) ... Setting up python3-pkg-resources (44.0.0-1) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up automake (1:1.16.1-4ubuntu4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3-distutils (3.8.0-1) ... Setting up dh-python (4.20191017ubuntu4) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up python3.7 (3.7.6-1ubuntu2) ... Setting up gettext (0.19.8.1-10) ... Setting up python3-setuptools (44.0.0-1) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up libhx509-5-heimdal:armhf (7.7.0+dfsg-1) ... Setting up libxext6:armhf (2:1.3.4-0ubuntu1) ... Setting up python3-all (3.8.0-3) ... Setting up man-db (2.9.0-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3-nose (1.3.7-4build1) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up python3.7-dev (3.7.6-1ubuntu2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up python3-xopen (0.8.4-1) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libpython3.8-dev:armhf (3.8.1-2ubuntu3) ... Setting up python3-kiwisolver (1.0.1-2build3) ... Setting up python3-numpy (1:1.17.4-5ubuntu2) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up python3.8-dev (3.8.1-2ubuntu3) ... Setting up libxss1:armhf (1:1.2.3-1) ... Setting up python3-dnaio (0.4.1-1build1) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libkrb5-26-heimdal:armhf (7.7.0+dfsg-1) ... Setting up python3-matplotlib (3.0.2-2ubuntu1) ... /usr/lib/python3/dist-packages/matplotlib/backends/qt_editor/figureoptions.py:220: SyntaxWarning: "is not" with a literal. Did you mean "!="? if marker is not 'none': /usr/lib/python3/dist-packages/matplotlib/pyplot.py:2201: SyntaxWarning: "is" with a literal. Did you mean "=="? if fignum is False or fignum is 0: /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libxft2:armhf (2.3.3-0ubuntu1) ... Setting up python3-scipy (1.3.3-3) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libpython3-dev:armhf (3.8.0-3) ... Setting up po-debconf (1.0.21) ... Setting up libtk8.6:armhf (8.6.10-1) ... Setting up python3-pandas-lib (0.25.3+dfsg-4) ... Setting up libheimntlm0-heimdal:armhf (7.7.0+dfsg-1) ... Setting up python3-pandas (0.25.3+dfsg-4) ... /usr/lib/python3/dist-packages/pandas/tests/frame/test_alter_axes.py:241: SyntaxWarning: "is" with a literal. Did you mean "=="? False if (keys[0] is "A" and keys[1] is "A") else drop # noqa: F632 /usr/lib/python3/dist-packages/pandas/tests/frame/test_alter_axes.py:241: SyntaxWarning: "is" with a literal. Did you mean "=="? False if (keys[0] is "A" and keys[1] is "A") else drop # noqa: F632 /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libgssapi3-heimdal:armhf (7.7.0+dfsg-1) ... Setting up python3-cutadapt (2.8-1build1) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up libpython3-all-dev:armhf (3.8.0-3) ... Setting up python3-dev (3.8.0-3) ... Setting up python3-all-dev (3.8.0-3) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-4) ... Setting up blt (2.5.3+dfsg-4) ... Setting up libldap-2.4-2:armhf (2.4.48+dfsg-1ubuntu4) ... Setting up python3-tk:armhf (3.8.0-1) ... Setting up libcurl3-gnutls:armhf (7.66.0-1ubuntu1) ... Setting up libhts3:armhf (1.10.2-2) ... Setting up python3-pysam (0.15.4+ds-1) ... /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up python3-seaborn (0.9.0-2) ... /usr/lib/python3/dist-packages/seaborn/tests/test_relational.py:415: SyntaxWarning: "is" with a literal. Did you mean "=="? assert p.hue_type is "categorical" /usr/lib/python3/dist-packages/seaborn/tests/test_relational.py:455: SyntaxWarning: "is" with a literal. Did you mean "=="? assert p.hue_type is "categorical" /usr/lib/python3/dist-packages/seaborn/tests/test_relational.py:475: SyntaxWarning: "is" with a literal. Did you mean "=="? assert p.hue_type is "categorical" /usr/lib/python3/dist-packages/seaborn/tests/test_relational.py:482: SyntaxWarning: "is" with a literal. Did you mean "=="? assert p.hue_type is "numeric" /usr/lib/python3.8/subprocess.py:838: RuntimeWarning: line buffering (buffering=1) isn't supported in binary mode, the default buffer size will be used self.stdin = io.open(p2cwrite, 'wb', bufsize) Setting up debhelper (12.7.3ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-python-sqt-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... Processing triggers for systemd (244.1-0ubuntu2) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-171-generic arm64 (armv7l) Toolchain package versions: binutils_2.33.90.20200122-1ubuntu2 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-25ubuntu1 gcc-9_9.2.1-25ubuntu1 libc6-dev_2.30-0ubuntu3 libstdc++-9-dev_9.2.1-25ubuntu1 libstdc++6_9.2.1-25ubuntu1 linux-libc-dev_5.4.0-12.15 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.8 autoconf_2.69-11.1 automake_1:1.16.1-4ubuntu4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11ubuntu2 base-passwd_3.5.47 bash_5.0-5ubuntu1 binutils_2.33.90.20200122-1ubuntu2 binutils-arm-linux-gnueabihf_2.33.90.20200122-1ubuntu2 binutils-common_2.33.90.20200122-1ubuntu2 blt_2.5.3+dfsg-4 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu5 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3ubuntu2 cpp_4:9.2.1-3.1ubuntu1 cpp-9_9.2.1-25ubuntu1 cython3_0.29.14-0.1ubuntu2 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7.3ubuntu1 debianutils_4.9.1 dh-autoreconf_19 dh-python_4.20191017ubuntu4 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dpkg_1.19.7ubuntu2 dpkg-dev_1.19.7ubuntu2 dwz_0.13-5 e2fsprogs_1.45.3-4ubuntu3 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu5 file_1:5.38-4 findutils_4.6.0+git+20190209-2ubuntu1 fontconfig-config_2.13.1-2ubuntu2 fonts-lyx_2.3.3-3 g++_4:9.2.1-3.1ubuntu1 g++-9_9.2.1-25ubuntu1 gcc_4:9.2.1-3.1ubuntu1 gcc-9_9.2.1-25ubuntu1 gcc-9-base_9.2.1-25ubuntu1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpg_2.2.17-3ubuntu1 gpg-agent_2.2.17-3ubuntu1 gpgconf_2.2.17-3ubuntu1 gpgv_2.2.17-3ubuntu1 grep_3.3-1build1 groff-base_1.22.4-4 gzip_1.10-0ubuntu4 hostname_3.23 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5ubuntu1 libapparmor1_2.13.3-7ubuntu1 libapt-pkg5.90_1.9.8 libarchive-zip-perl_1.67-1 libargon2-1_0~20171227-0.2 libasan5_9.2.1-25ubuntu1 libasn1-8-heimdal_7.7.0+dfsg-1 libassuan0_2.5.3-7ubuntu2 libatomic1_9.2.1-25ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu5 libaudit1_1:2.8.5-2ubuntu5 libbinutils_2.33.90.20200122-1ubuntu2 libblas3_3.9.0-1 libblkid1_2.34-0.1ubuntu5 libbrotli1_1.0.7-6 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-0ubuntu3 libc-dev-bin_2.30-0ubuntu3 libc6_2.30-0ubuntu3 libc6-dev_2.30-0ubuntu3 libcap-ng0_0.7.9-2.1build1 libcap2_1:2.27-1 libcc1-0_9.2.1-25ubuntu1 libcom-err2_1.45.3-4ubuntu3 libcroco3_0.6.13-1 libcryptsetup12_2:2.2.2-1ubuntu1 libctf-nobfd0_2.33.90.20200122-1ubuntu2 libctf0_2.33.90.20200122-1ubuntu2 libcurl3-gnutls_7.66.0-1ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu1 libdebconfclient0_0.250ubuntu2 libdebhelper-perl_12.7.3ubuntu1 libdeflate0_1.5-1 libdevmapper1.02.1_2:1.02.155-2ubuntu8 libdpkg-perl_1.19.7ubuntu2 libelf1_0.176-1.1build1 libexpat1_2.2.9-1 libexpat1-dev_2.2.9-1 libext2fs2_1.45.3-4ubuntu3 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu5 libffi6_3.2.1-9 libffi7_3.3-3 libfile-stripnondeterminism-perl_1.6.3-2 libfontconfig1_2.13.1-2ubuntu2 libfreetype6_2.10.1-2 libgcc-9-dev_9.2.1-25ubuntu1 libgcc1_1:9.2.1-25ubuntu1 libgcrypt20_1.8.5-3ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_9.2.1-25ubuntu1 libglib2.0-0_2.63.3-3 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.11.1-2ubuntu2 libgomp1_9.2.1-25ubuntu1 libgpg-error0_1.36-7build1 libgssapi-krb5-2_1.17-6ubuntu3 libgssapi3-heimdal_7.7.0+dfsg-1 libhcrypto4-heimdal_7.7.0+dfsg-1 libheimbase1-heimdal_7.7.0+dfsg-1 libheimntlm0-heimdal_7.7.0+dfsg-1 libhogweed4_3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhts3_1.10.2-2 libhx509-5-heimdal_7.7.0+dfsg-1 libicu63_63.2-2 libidn2-0_2.2.0-2 libip4tc2_1.8.3-2ubuntu5 libisl21_0.21-2 libisl22_0.22-2 libjs-jquery_3.3.1~dfsg-3 libjs-jquery-ui_1.12.1+dfsg-5 libjson-c4_0.13.1+dfsg-6 libk5crypto3_1.17-6ubuntu3 libkeyutils1_1.6-6ubuntu1 libkmod2_26-3ubuntu1 libkrb5-26-heimdal_7.7.0+dfsg-1 libkrb5-3_1.17-6ubuntu3 libkrb5support0_1.17-6ubuntu3 liblapack3_3.9.0-1 liblbfgsb0_3.0+dfsg.3-7 libldap-2.4-2_2.4.48+dfsg-1ubuntu4 libldap-common_2.4.48+dfsg-1ubuntu4 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1ubuntu5 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libncurses6_6.1+20191019-1ubuntu1 libncursesw6_6.1+20191019-1ubuntu1 libnettle6_3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1 libnpth0_1.6-1 libp11-kit0_0.23.19-2 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libpng16-16_1.6.37-1 libprocps7_2:3.3.15-2ubuntu3 libpsl5_0.20.2-2 libpython3-all-dev_3.8.0-3 libpython3-dev_3.8.0-3 libpython3-stdlib_3.8.0-3 libpython3.7_3.7.6-1ubuntu2 libpython3.7-dev_3.7.6-1ubuntu2 libpython3.7-minimal_3.7.6-1ubuntu2 libpython3.7-stdlib_3.7.6-1ubuntu2 libpython3.8_3.8.1-2ubuntu3 libpython3.8-dev_3.8.1-2ubuntu3 libpython3.8-minimal_3.8.1-2ubuntu3 libpython3.8-stdlib_3.8.1-2ubuntu3 libreadline8_8.0-3 libroken18-heimdal_7.7.0+dfsg-1 librtmp1_2.4+20151223.gitfa8646d.1-2build1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.2-2ubuntu2 libselinux1_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1ubuntu5 libsqlite3-0_3.30.1-1ubuntu1 libss2_1.45.3-4ubuntu3 libssh-4_0.9.3-2ubuntu1 libssl1.1_1.1.1d-2ubuntu3 libstdc++-9-dev_9.2.1-25ubuntu1 libstdc++6_9.2.1-25ubuntu1 libsub-override-perl_0.09-2 libsystemd0_244.1-0ubuntu2 libtasn1-6_4.15.0-2 libtcl8.6_8.6.10+dfsg-1 libtinfo6_6.1+20191019-1ubuntu1 libtk8.6_8.6.10-1 libtool_2.4.6-11 libubsan1_9.2.1-25ubuntu1 libuchardet0_0.0.6-3 libudev1_244.1-0ubuntu2 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu5 libwind0-heimdal_7.7.0+dfsg-1 libx11-6_2:1.6.8-1 libx11-data_2:1.6.8-1 libxau6_1:1.0.9-0ubuntu1 libxcb1_1.13.1-3build1 libxdmcp6_1:1.1.3-0ubuntu1 libxext6_2:1.3.4-0ubuntu1 libxft2_2.3.3-0ubuntu1 libxml2_2.9.4+dfsg1-8ubuntu3 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libzstd1_1.4.4+dfsg-1 linux-libc-dev_5.4.0-12.15 lockfile-progs_0.1.18 login_1:4.8-1ubuntu1 logsave_1.45.3-4ubuntu3 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.3-17ubuntu3 mime-support_3.64ubuntu1 mount_2.34-0.1ubuntu5 ncurses-base_6.1+20191019-1ubuntu1 ncurses-bin_6.1+20191019-1ubuntu1 openssl_1.1.1d-2ubuntu3 optipng_0.7.7-1 passwd_1:4.8-1ubuntu1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-9 pigz_2.4-1 pinentry-curses_1.1.0-3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu3 python-matplotlib-data_3.0.2-2ubuntu1 python3_3.8.0-3 python3-all_3.8.0-3 python3-all-dev_3.8.0-3 python3-cutadapt_2.8-1build1 python3-cycler_0.10.0-2 python3-dateutil_2.7.3-3ubuntu1 python3-decorator_4.3.0-1.1build1 python3-dev_3.8.0-3 python3-distutils_3.8.0-1 python3-dnaio_0.4.1-1build1 python3-kiwisolver_1.0.1-2build3 python3-lib2to3_3.8.0-1 python3-matplotlib_3.0.2-2ubuntu1 python3-minimal_3.8.0-3 python3-nose_1.3.7-4build1 python3-numpy_1:1.17.4-5ubuntu2 python3-pandas_0.25.3+dfsg-4 python3-pandas-lib_0.25.3+dfsg-4 python3-pkg-resources_44.0.0-1 python3-pyparsing_2.4.2-1 python3-pysam_0.15.4+ds-1 python3-scipy_1.3.3-3 python3-seaborn_0.9.0-2 python3-setuptools_44.0.0-1 python3-six_1.14.0-2 python3-tk_3.8.0-1 python3-tz_2019.3-1 python3-xopen_0.8.4-1 python3.7_3.7.6-1ubuntu2 python3.7-dev_3.7.6-1ubuntu2 python3.7-minimal_3.7.6-1ubuntu2 python3.8_3.8.1-2ubuntu3 python3.8-dev_3.8.1-2ubuntu3 python3.8-minimal_3.8.1-2ubuntu3 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-sqt-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_244.1-0ubuntu2 systemd-sysv_244.1-0ubuntu2 sysvinit-utils_2.96-1ubuntu1 tar_1.30+dfsg-6 tk8.6-blt2.5_2.5.3+dfsg-4 ttf-bitstream-vera_1.10-8 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 util-linux_2.34-0.1ubuntu5 x11-common_1:7.7+19ubuntu13 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 zlib1g-dev_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Jan 28 11:14:32 2020 UTC gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./python-sqt_0.8.0-3ubuntu1.dsc dpkg-source: info: extracting python-sqt in python-sqt-0.8.0 dpkg-source: info: unpacking python-sqt_0.8.0.orig.tar.gz dpkg-source: info: unpacking python-sqt_0.8.0-3ubuntu1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fixme_ignore_failing_test.patch dpkg-source: info: applying fixme_ignore_failing_test2.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18622774 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18622774 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-18622774 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package python-sqt dpkg-buildpackage: info: source version 0.8.0-3ubuntu1 dpkg-buildpackage: info: source distribution focal dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf dpkg-source: info: using options from python-sqt-0.8.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ fakeroot debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean --test-nose -i python{version} -p "3.7 3.8" I: pybuild base:217: python3.7 setup.py clean running clean removing '/<>/.pybuild/cpython3_3.7_sqt/build' (and everything under it) 'build/bdist.linux-armhf' does not exist -- can't clean it 'build/scripts-3.7' does not exist -- can't clean it I: pybuild base:217: python3.8 setup.py clean running clean removing '/<>/.pybuild/cpython3_3.8_sqt/build' (and everything under it) 'build/bdist.linux-armhf' does not exist -- can't clean it 'build/scripts-3.8' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-sqt.substvars debian/files rm -fr -- debian/python3-sqt/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch --with python3 --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild pybuild --configure --test-nose -i python{version} -p "3.7 3.8" I: pybuild base:217: python3.7 setup.py config running config I: pybuild base:217: python3.8 setup.py config running config dh_auto_build -a -O--buildsystem=pybuild pybuild --build --test-nose -i python{version} -p "3.7 3.8" I: pybuild base:217: /usr/bin/python3.7 setup.py build running build running build_py creating /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/utils.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/_codons.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/region.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/compat.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/_version.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/colorspace.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/align.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/reads.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/ansicolor.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/dna.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/intervaltree.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/__init__.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/math.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/__main__.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/qualtrim.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/cigar.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/args.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt creating /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io copying sqt/io/fasta.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io copying sqt/io/__init__.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io copying sqt/io/bam.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io copying sqt/io/sff.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io copying sqt/io/gtf.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io creating /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/chars.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/translate.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/readcov.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/compare_sequences.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/checkvcfref.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/fixbam64.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/fastastats.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/histogram.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/align.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/qgramfreq.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/bam2fastq.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/checkfastqpe.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/fastxmod.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/coverage.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/fastaextract.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/qualityguess.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/__init__.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/addadapt.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/randomseq.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/bamstats.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/bameof.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/samfixn.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/mutate.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/samsetop.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/fastagrep.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/simreads.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/readlenhisto.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/cutvect.py -> /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands UPDATING /<>/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py set /<>/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py to '0.8.0' running build_ext Compiling sqt/_helpers.pyx because it changed. [1/1] Cythonizing sqt/_helpers.pyx building 'sqt._helpers' extension creating build creating build/temp.linux-armhf-3.7 creating build/temp.linux-armhf-3.7/sqt arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c sqt/_helpers.c -o build/temp.linux-armhf-3.7/sqt/_helpers.o sqt/_helpers.c: In function ‘__pyx_pf_3sqt_8_helpers_12nt_to_aa’: sqt/_helpers.c:6531:51: warning: array subscript has type ‘char’ [-Wchar-subscripts] 6531 | __pyx_v_nt0 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[__pyx_v_i])]); | ~~~~~~~~~~^~~~~~~~~~~~ sqt/_helpers.c:6540:51: warning: array subscript has type ‘char’ [-Wchar-subscripts] 6540 | __pyx_v_nt1 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 1)])]); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ sqt/_helpers.c:6549:51: warning: array subscript has type ‘char’ [-Wchar-subscripts] 6549 | __pyx_v_nt2 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 2)])]); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/sqt/_helpers.o -o /<>/.pybuild/cpython3_3.7_sqt/build/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<>/sqt/_helpers.pyx tree = Parsing.p_module(s, pxd, full_module_name) I: pybuild base:217: /usr/bin/python3 setup.py build running build running build_py creating /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/utils.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/_codons.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/region.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/compat.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/_version.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/colorspace.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/align.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/reads.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/ansicolor.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/dna.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/intervaltree.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/__init__.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/math.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/__main__.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/qualtrim.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/cigar.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt copying sqt/args.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt creating /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io copying sqt/io/fasta.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io copying sqt/io/__init__.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io copying sqt/io/bam.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io copying sqt/io/sff.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io copying sqt/io/gtf.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io creating /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/chars.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/translate.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/readcov.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/compare_sequences.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/checkvcfref.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/fixbam64.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/fastastats.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/histogram.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/align.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/qgramfreq.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/bam2fastq.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/checkfastqpe.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/fastxmod.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/coverage.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/fastaextract.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/qualityguess.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/__init__.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/addadapt.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/randomseq.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/bamstats.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/bameof.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/samfixn.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/mutate.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/samsetop.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/fastagrep.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/simreads.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/readlenhisto.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands copying sqt/commands/cutvect.py -> /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands UPDATING /<>/.pybuild/cpython3_3.8_sqt/build/sqt/_version.py set /<>/.pybuild/cpython3_3.8_sqt/build/sqt/_version.py to '0.8.0' running build_ext building 'sqt._helpers' extension creating build/temp.linux-armhf-3.8 creating build/temp.linux-armhf-3.8/sqt arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.8 -c sqt/_helpers.c -o build/temp.linux-armhf-3.8/sqt/_helpers.o sqt/_helpers.c: In function ‘__pyx_pf_3sqt_8_helpers_12nt_to_aa’: sqt/_helpers.c:6531:51: warning: array subscript has type ‘char’ [-Wchar-subscripts] 6531 | __pyx_v_nt0 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[__pyx_v_i])]); | ~~~~~~~~~~^~~~~~~~~~~~ sqt/_helpers.c:6540:51: warning: array subscript has type ‘char’ [-Wchar-subscripts] 6540 | __pyx_v_nt1 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 1)])]); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ sqt/_helpers.c:6549:51: warning: array subscript has type ‘char’ [-Wchar-subscripts] 6549 | __pyx_v_nt2 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 2)])]); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/sqt/_helpers.o -o /<>/.pybuild/cpython3_3.8_sqt/build/sqt/_helpers.cpython-38-arm-linux-gnueabihf.so debian/rules override_dh_auto_test make[1]: Entering directory '/<>' LC_ALL=C.UTF-8 dh_auto_test pybuild --test --test-nose -i python{version} -p "3.7 3.8" I: pybuild base:217: cd /<>/.pybuild/cpython3_3.7_sqt/build; python3.7 -m nose -v tests tests.testalign.test_edit_distance ... ok tests.testalign.test_edit_distance_bytes ... ok tests.testalign.test_edit_distance_banded ... ok tests.testalign.test_global_alignment ... ok tests.testalign.test_consensus ... ok tests.testalign.test_hamming_distance ... ok tests.testalign.test_hamming_distance_incorrect_length ... ok tests.testcigar.test_parse ... ok tests.testcigar.test_cigar_class ... ok tests.testcigar.test_parse_error_1 ... ok tests.testcigar.test_parse_error_2 ... ok tests.testcigar.test_parse_error_3 ... ok tests.testcigar.test_elements ... ok tests.testcigar.test_length ... ok tests.testcigar.test_concat ... ok tests.testcigar.test_split_at_element ... ok tests.testcigar.test_reference_to_query_position ... ok tests.testcigar.test_clipping ... ok tests.testcolorspace.test_encode ... ok tests.testcolorspace.test_decode ... ok tests.testdna.test_complement_string ... ok tests.testdna.test_complement_bytes ... ok tests.testdna.test_n_intervals ... ok tests.testdna.test_intervals_complement ... ok tests.testdna.test_amino_acid_regex ... ok tests.testdna.test_nt_to_aa ... ok tests.testfasta.test_fastqwriter ... ok tests.testfasta.test_fastqwriter_twoheaders ... ok tests.testfasta.test_fastawriter ... ok tests.testfasta.test_fastawriter_linelength ... ok tests.testfasta.test_fastawriter_sequence ... ok tests.testfasta.test_fastawriter_contextmanager ... ok tests.testfasta.test_fastareader ... ok tests.testfasta.test_fastareader_upper ... ok tests.testfasta.test_fastareader_lower ... ok tests.testfasta.test_fastareader_binary ... ok tests.testfasta.test_sequence_reader ... ok tests.testfasta.test_fastareader_contextmanager ... ok tests.testfasta.test_fastq_header ... ok tests.testindexedfasta.test_indexedfasta_contextmanager ... ok tests.testindexedfasta.test_indexedfasta ... ok tests.testindexedfasta.test_all_regions ... ok tests.testintervaltree.test_intervaltree ... ok tests.testmedian.test_median ... ok tests.testregion.test_region ... ok ---------------------------------------------------------------------- Ran 45 tests in 24.590s OK I: pybuild base:217: cd /<>/.pybuild/cpython3_3.8_sqt/build; python3.8 -m nose -v tests tests.testalign.test_edit_distance ... ok tests.testalign.test_edit_distance_bytes ... ok tests.testalign.test_edit_distance_banded ... ok tests.testalign.test_global_alignment ... ok tests.testalign.test_consensus ... ok tests.testalign.test_hamming_distance ... ok tests.testalign.test_hamming_distance_incorrect_length ... ok tests.testcigar.test_parse ... ok tests.testcigar.test_cigar_class ... ok tests.testcigar.test_parse_error_1 ... ok tests.testcigar.test_parse_error_2 ... ok tests.testcigar.test_parse_error_3 ... ok tests.testcigar.test_elements ... ok tests.testcigar.test_length ... ok tests.testcigar.test_concat ... ok tests.testcigar.test_split_at_element ... ok tests.testcigar.test_reference_to_query_position ... ok tests.testcigar.test_clipping ... ok tests.testcolorspace.test_encode ... ok tests.testcolorspace.test_decode ... ok tests.testdna.test_complement_string ... ok tests.testdna.test_complement_bytes ... ok tests.testdna.test_n_intervals ... ok tests.testdna.test_intervals_complement ... ok tests.testdna.test_amino_acid_regex ... ok tests.testdna.test_nt_to_aa ... ok tests.testfasta.test_fastqwriter ... ok tests.testfasta.test_fastqwriter_twoheaders ... ok tests.testfasta.test_fastawriter ... ok tests.testfasta.test_fastawriter_linelength ... ok tests.testfasta.test_fastawriter_sequence ... ok tests.testfasta.test_fastawriter_contextmanager ... ok tests.testfasta.test_fastareader ... ok tests.testfasta.test_fastareader_upper ... ok tests.testfasta.test_fastareader_lower ... ok tests.testfasta.test_fastareader_binary ... ok tests.testfasta.test_sequence_reader ... ok tests.testfasta.test_fastareader_contextmanager ... ok tests.testfasta.test_fastq_header ... ok tests.testindexedfasta.test_indexedfasta_contextmanager ... ok tests.testindexedfasta.test_indexedfasta ... ok tests.testindexedfasta.test_all_regions ... ok tests.testintervaltree.test_intervaltree ... ok tests.testmedian.test_median ... ok tests.testregion.test_region ... ok ---------------------------------------------------------------------- Ran 45 tests in 24.325s OK make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with python3 --buildsystem=pybuild dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild rm -f -- debian/python3-sqt.substvars rm -fr -- debian/.debhelper/generated/python3-sqt/ debian/python3-sqt/ debian/tmp/ dh_auto_install -a -O--buildsystem=pybuild install -d /<>/debian/python3-sqt pybuild --install --test-nose -i python{version} -p "3.7 3.8" --dest-dir /<>/debian/python3-sqt I: pybuild base:217: /usr/bin/python3.7 setup.py install --root /<>/debian/python3-sqt running install running build running build_py UPDATING /<>/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py set /<>/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py to '0.8.0' running build_ext running install_lib creating /<>/debian/python3-sqt/usr creating /<>/debian/python3-sqt/usr/lib creating /<>/debian/python3-sqt/usr/lib/python3.7 creating /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages creating /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/utils.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/_codons.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/region.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt creating /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/chars.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/translate.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/readcov.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/compare_sequences.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/checkvcfref.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fixbam64.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastastats.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/histogram.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/align.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/qgramfreq.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/bam2fastq.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/checkfastqpe.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastxmod.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/coverage.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastaextract.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/qualityguess.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/__init__.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/addadapt.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/randomseq.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/bamstats.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/bameof.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/samfixn.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/mutate.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/samsetop.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastagrep.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/simreads.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/readlenhisto.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/commands/cutvect.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands creating /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io/fasta.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io creating /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io/__pycache__/gtf.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io/__pycache__/__init__.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io/__pycache__/fasta.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io/__init__.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io/bam.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io/sff.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/io/gtf.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/compat.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/colorspace.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/align.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/reads.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt creating /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/utils.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/__init__.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/cigar.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/align.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/region.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/colorspace.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/_codons.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/intervaltree.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/compat.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/args.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/_version.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/math.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/dna.cpython-37.pyc -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/ansicolor.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/dna.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/intervaltree.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__init__.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/math.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/__main__.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/qualtrim.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/cigar.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/args.py -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /<>/.pybuild/cpython3_3.7_sqt/build/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so -> /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/utils.py to utils.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/_codons.py to _codons.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/region.py to region.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/chars.py to chars.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/translate.py to translate.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/readcov.py to readcov.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/compare_sequences.py to compare_sequences.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/checkvcfref.py to checkvcfref.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fixbam64.py to fixbam64.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastastats.py to fastastats.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/histogram.py to histogram.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/align.py to align.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/qgramfreq.py to qgramfreq.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/bam2fastq.py to bam2fastq.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/checkfastqpe.py to checkfastqpe.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastxmod.py to fastxmod.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/coverage.py to coverage.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastaextract.py to fastaextract.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/qualityguess.py to qualityguess.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/addadapt.py to addadapt.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/randomseq.py to randomseq.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/bamstats.py to bamstats.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/bameof.py to bameof.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/samfixn.py to samfixn.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/mutate.py to mutate.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/samsetop.py to samsetop.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastagrep.py to fastagrep.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/simreads.py to simreads.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/readlenhisto.py to readlenhisto.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/cutvect.py to cutvect.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/fasta.py to fasta.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/bam.py to bam.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/sff.py to sff.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/gtf.py to gtf.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/compat.py to compat.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/_version.py to _version.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/colorspace.py to colorspace.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/align.py to align.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/reads.py to reads.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/ansicolor.py to ansicolor.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/dna.py to dna.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/intervaltree.py to intervaltree.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/math.py to math.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__main__.py to __main__.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/qualtrim.py to qualtrim.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/cigar.py to cigar.cpython-37.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/args.py to args.cpython-37.pyc running install_egg_info running egg_info creating sqt.egg-info writing sqt.egg-info/PKG-INFO writing dependency_links to sqt.egg-info/dependency_links.txt writing entry points to sqt.egg-info/entry_points.txt writing requirements to sqt.egg-info/requires.txt writing top-level names to sqt.egg-info/top_level.txt writing manifest file 'sqt.egg-info/SOURCES.txt' reading manifest file 'sqt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'sqt.egg-info/SOURCES.txt' Copying sqt.egg-info to /<>/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt-0.8.0.egg-info Skipping SOURCES.txt running install_scripts Installing sqt script to /<>/debian/python3-sqt/usr/bin I: pybuild base:217: /usr/bin/python3 setup.py install --root /<>/debian/python3-sqt running install running build running build_py UPDATING /<>/.pybuild/cpython3_3.8_sqt/build/sqt/_version.py set /<>/.pybuild/cpython3_3.8_sqt/build/sqt/_version.py to '0.8.0' running build_ext running install_lib creating /<>/debian/python3-sqt/usr/lib/python3.8 creating /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages creating /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/utils.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/_codons.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/region.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt creating /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/chars.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/translate.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/readcov.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/compare_sequences.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/checkvcfref.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/fixbam64.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/fastastats.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/histogram.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/align.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/qgramfreq.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/bam2fastq.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/checkfastqpe.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/fastxmod.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/coverage.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/fastaextract.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/qualityguess.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/__init__.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/addadapt.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/randomseq.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/bamstats.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/bameof.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/samfixn.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/mutate.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/samsetop.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/fastagrep.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/simreads.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/readlenhisto.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/commands/cutvect.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands creating /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io/fasta.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io creating /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io/__pycache__/fasta.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io/__pycache__/gtf.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io/__pycache__/__init__.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io/__init__.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io/bam.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io/sff.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/io/gtf.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/compat.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/_version.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/colorspace.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/align.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/reads.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt creating /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/utils.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/intervaltree.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/math.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/dna.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/region.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/compat.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/align.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/_version.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/colorspace.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/__init__.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/_codons.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/args.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__pycache__/cigar.cpython-38.pyc -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__pycache__ copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/ansicolor.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/dna.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/intervaltree.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__init__.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/math.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/__main__.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/qualtrim.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/_helpers.cpython-38-arm-linux-gnueabihf.so -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/cigar.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt copying /<>/.pybuild/cpython3_3.8_sqt/build/sqt/args.py -> /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/utils.py to utils.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/_codons.py to _codons.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/region.py to region.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/chars.py to chars.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/translate.py to translate.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/readcov.py to readcov.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/compare_sequences.py to compare_sequences.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/checkvcfref.py to checkvcfref.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/fixbam64.py to fixbam64.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/fastastats.py to fastastats.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/histogram.py to histogram.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/align.py to align.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/qgramfreq.py to qgramfreq.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/bam2fastq.py to bam2fastq.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/checkfastqpe.py to checkfastqpe.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/fastxmod.py to fastxmod.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/coverage.py to coverage.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/fastaextract.py to fastaextract.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/qualityguess.py to qualityguess.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/__init__.py to __init__.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/addadapt.py to addadapt.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/randomseq.py to randomseq.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/bamstats.py to bamstats.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/bameof.py to bameof.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/samfixn.py to samfixn.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/mutate.py to mutate.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/samsetop.py to samsetop.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/fastagrep.py to fastagrep.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/simreads.py to simreads.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/readlenhisto.py to readlenhisto.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/commands/cutvect.py to cutvect.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io/fasta.py to fasta.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io/__init__.py to __init__.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io/bam.py to bam.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io/sff.py to sff.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/io/gtf.py to gtf.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/compat.py to compat.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/_version.py to _version.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/colorspace.py to colorspace.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/align.py to align.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/reads.py to reads.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/ansicolor.py to ansicolor.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/dna.py to dna.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/intervaltree.py to intervaltree.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__init__.py to __init__.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/math.py to math.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/__main__.py to __main__.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/qualtrim.py to qualtrim.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/cigar.py to cigar.cpython-38.pyc byte-compiling /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt/args.py to args.cpython-38.pyc running install_egg_info running egg_info writing sqt.egg-info/PKG-INFO writing dependency_links to sqt.egg-info/dependency_links.txt writing entry points to sqt.egg-info/entry_points.txt writing requirements to sqt.egg-info/requires.txt writing top-level names to sqt.egg-info/top_level.txt reading manifest file 'sqt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'sqt.egg-info/SOURCES.txt' Copying sqt.egg-info to /<>/debian/python3-sqt/usr/lib/python3.8/dist-packages/sqt-0.8.0.egg-info Skipping SOURCES.txt running install_scripts Installing sqt script to /<>/debian/python3-sqt/usr/bin dh_installdocs -a -O--buildsystem=pybuild install -d debian/python3-sqt/usr/share/doc/python3-sqt install -d debian/.debhelper/generated/python3-sqt install -p -m0644 debian/README.Debian debian/python3-sqt/usr/share/doc/python3-sqt/README.Debian install -p -m0644 debian/copyright debian/python3-sqt/usr/share/doc/python3-sqt/copyright dh_installchangelogs -a -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/python3-sqt/usr/share/doc/python3-sqt/changelog.Debian dh_installman -a -O--buildsystem=pybuild install -d debian/python3-sqt/usr/share/man/man1/ install -p -m0644 ./debian/sqt.1 debian/python3-sqt/usr/share/man/man1/sqt.1 man-recode --to-code UTF-8 --suffix .dh-new debian/python3-sqt/usr/share/man/man1/sqt.1 mv debian/python3-sqt/usr/share/man/man1/sqt.1.dh-new debian/python3-sqt/usr/share/man/man1/sqt.1 chmod 0644 -- debian/python3-sqt/usr/share/man/man1/sqt.1 dh_python3 -a -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 4.20191017ubuntu4 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': True, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:165: supported Python versions: 3.7,3.8 (default=3.8) D: dh_python3 debhelper:152: source=python-sqt, binary packages=['python3-sqt'] D: dh_python3 dh_python3:183: processing package python3-sqt... D: dh_python3 fs:49: moving files from debian/python3-sqt/usr/lib/python3.7/dist-packages to debian/python3-sqt/usr/lib/python3/dist-packages/ D: dh_python3 tools:232: invoking: /usr/bin/python3.7 -c 'import sysconfig as s;print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' D: dh_python3 fs:49: moving files from debian/python3-sqt/usr/lib/python3.8/dist-packages to debian/python3-sqt/usr/lib/python3/dist-packages/ D: dh_python3 tools:232: invoking: /usr/bin/python3.8 -c 'import sysconfig as s;print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' D: dh_python3 fs:260: package python3-sqt details = {'requires.txt': {'debian/python3-sqt/usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.7'), Version('3.8')}, 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package python3-sqt D: dh_python3 pydist:137: trying to find dependency for cutadapt (python=None) D: dh_python3 pydist:137: trying to find dependency for matplotlib (python=None) D: dh_python3 pydist:137: trying to find dependency for pysam!=0.9.0 (python=None) D: dh_python3 pydist:137: trying to find dependency for seaborn (python=None) D: dh_python3 pydist:137: trying to find dependency for xopen (python=None) D: dh_python3 depends:275: D={'python3-seaborn', 'python3-pysam', 'python3 (>= 3.7~)', 'python3:any', 'python3 (<< 3.9)', 'python3-matplotlib', 'python3-xopen', 'python3-cutadapt'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installinit -a -O--buildsystem=pybuild dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild cd debian/python3-sqt chmod a-x usr/share/doc/python3-sqt/changelog.Debian usr/share/man/man1/sqt.1 gzip -9nf usr/share/doc/python3-sqt/changelog.Debian usr/share/man/man1/sqt.1 cd '/<>' dh_fixperms -a -O--buildsystem=pybuild find debian/python3-sqt -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-sqt ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-sqt/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-sqt/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-sqt/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-sqt/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-sqt -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-sqt/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-sqt/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild install -d debian/python3-sqt/usr/lib/debug/.dwz/arm-linux-gnueabihf dwz -mdebian/python3-sqt/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-sqt.debug -M/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-sqt.debug -- debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-38-arm-linux-gnueabihf.so objcopy --compress-debug-sections debian/python3-sqt/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-sqt.debug dh_strip -a -O--buildsystem=pybuild install -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/98 objcopy --only-keep-debug --compress-debug-sections debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-38-arm-linux-gnueabihf.so debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/98/b16d3ad045a641cc40e244c9f9035c317c4477.debug chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/98/b16d3ad045a641cc40e244c9f9035c317c4477.debug chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/98/b16d3ad045a641cc40e244c9f9035c317c4477.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-38-arm-linux-gnueabihf.so objcopy --add-gnu-debuglink debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/98/b16d3ad045a641cc40e244c9f9035c317c4477.debug debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-38-arm-linux-gnueabihf.so install -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/c9 objcopy --only-keep-debug --compress-debug-sections debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/c9/32c54b820517d82766503cbfdf225b144405a9.debug chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/c9/32c54b820517d82766503cbfdf225b144405a9.debug chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/c9/32c54b820517d82766503cbfdf225b144405a9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so objcopy --add-gnu-debuglink debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/c9/32c54b820517d82766503cbfdf225b144405a9.debug debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so install -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-sqt/usr/lib/debug/.dwz/arm-linux-gnueabihf debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-sqt/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-sqt/usr/lib/debug install -d debian/.debhelper/python3-sqt/dbgsym-root/usr/share/doc ln -s python3-sqt debian/.debhelper/python3-sqt/dbgsym-root/usr/share/doc/python3-sqt-dbgsym dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/python3-sqt/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -d debian/python3-sqt/DEBIAN dpkg-shlibdeps -Tdebian/python3-sqt.substvars debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-38-arm-linux-gnueabihf.so debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so dh_installdeb -a -O--buildsystem=pybuild printf '#!/bin/sh\nset -e\n' > debian/python3-sqt/DEBIAN/postinst cat debian/python3-sqt.postinst.debhelper >> debian/python3-sqt/DEBIAN/postinst chmod 0755 -- debian/python3-sqt/DEBIAN/postinst chown 0:0 -- debian/python3-sqt/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-sqt/DEBIAN/prerm cat debian/python3-sqt.prerm.debhelper >> debian/python3-sqt/DEBIAN/prerm chmod 0755 -- debian/python3-sqt/DEBIAN/prerm chown 0:0 -- debian/python3-sqt/DEBIAN/prerm dh_gencontrol -a -O--buildsystem=pybuild echo misc:Depends= >> debian/python3-sqt.substvars echo misc:Pre-Depends= >> debian/python3-sqt.substvars install -d debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-sqt -ldebian/changelog -Tdebian/python3-sqt.substvars -Pdebian/.debhelper/python3-sqt/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=python3-sqt-dbgsym "-DDepends=python3-sqt (= \${binary:Version})" "-DDescription=debug symbols for python3-sqt" "-DBuild-Ids=98b16d3ad045a641cc40e244c9f9035c317c4477 c932c54b820517d82766503cbfdf225b144405a9" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Versions} unused, but is defined chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-sqt -ldebian/changelog -Tdebian/python3-sqt.substvars -Pdebian/python3-sqt -UMulti-Arch dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Versions} unused, but is defined chmod 0644 -- debian/python3-sqt/DEBIAN/control chown 0:0 -- debian/python3-sqt/DEBIAN/control dh_md5sums -a -O--buildsystem=pybuild cd debian/python3-sqt >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-sqt/DEBIAN/md5sums chown 0:0 -- debian/python3-sqt/DEBIAN/md5sums cd debian/.debhelper/python3-sqt/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/md5sums dh_builddeb -a -O--buildsystem=pybuild dpkg-deb --build debian/python3-sqt .. install -d debian/.debhelper/scratch-space/build-python3-sqt dpkg-deb --build debian/.debhelper/python3-sqt/dbgsym-root debian/.debhelper/scratch-space/build-python3-sqt INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing python3-sqt (in debian/python3-sqt); do_strip: , oemstrip: pkgstriptranslations: processing python3-sqt-dbgsym (in debian/.debhelper/python3-sqt/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python3-sqt/DEBIAN/control, package python3-sqt, directory debian/python3-sqt pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-sqt ... pkgstripfiles: No PNG files. pkgstripfiles: processing control file: debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/control, package python3-sqt-dbgsym, directory debian/.debhelper/python3-sqt/dbgsym-root dpkg-deb: building package 'python3-sqt-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-sqt/python3-sqt-dbgsym_0.8.0-3ubuntu1_armhf.deb'. dpkg-deb: building package 'python3-sqt' in '../python3-sqt_0.8.0-3ubuntu1_armhf.deb'. Renaming python3-sqt-dbgsym_0.8.0-3ubuntu1_armhf.deb to python3-sqt-dbgsym_0.8.0-3ubuntu1_armhf.ddeb mv debian/.debhelper/scratch-space/build-python3-sqt/python3-sqt-dbgsym_0.8.0-3ubuntu1_armhf.deb ../python3-sqt-dbgsym_0.8.0-3ubuntu1_armhf.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../python-sqt_0.8.0-3ubuntu1_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-source: info: using options from python-sqt-0.8.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20200128-1120 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ python-sqt_0.8.0-3ubuntu1_armhf.changes: ---------------------------------------- Format: 1.8 Date: Tue, 28 Jan 2020 12:13:55 +0100 Source: python-sqt Binary: python3-sqt Architecture: armhf Version: 0.8.0-3ubuntu1 Distribution: focal-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: python3-sqt - SeQuencing Tools for biological DNA/RNA high-throughput data Changes: python-sqt (0.8.0-3ubuntu1) focal; urgency=medium . * Fix build dependencies. Checksums-Sha1: 7eb8060ab4b0ed86f124a7f29ef790cc0c695528 8902 python-sqt_0.8.0-3ubuntu1_armhf.buildinfo 089eb7b7acf321c65f2f448ef77e39cfee2606be 630936 python3-sqt-dbgsym_0.8.0-3ubuntu1_armhf.ddeb 43e7c139fde1c4dbe8ebe3d36471b1d9d93da138 160544 python3-sqt_0.8.0-3ubuntu1_armhf.deb Checksums-Sha256: 232ad9617d583d88bffd4cbf293f71a675dcb5be2cc5c0ee69b2d7771ff96dbf 8902 python-sqt_0.8.0-3ubuntu1_armhf.buildinfo e4fe37b158b432fed2b5789f297da1f4426f038413f15cf4fa9f6d555b663c78 630936 python3-sqt-dbgsym_0.8.0-3ubuntu1_armhf.ddeb fbc00ed6634d593e8c472895a3b63d7fc4303e41199149e45611781ff8cf7b55 160544 python3-sqt_0.8.0-3ubuntu1_armhf.deb Files: df72b093a7b4ea6ac576bcbba9b93819 8902 science optional python-sqt_0.8.0-3ubuntu1_armhf.buildinfo c51efd278b526a3913a1347e1378c6a1 630936 debug optional python3-sqt-dbgsym_0.8.0-3ubuntu1_armhf.ddeb 8446891dc4876b6e9bfd47b863d7ffd4 160544 python optional python3-sqt_0.8.0-3ubuntu1_armhf.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ python3-sqt_0.8.0-3ubuntu1_armhf.deb ------------------------------------ new debian package, version 2.0. size 160544 bytes: control archive=3416 bytes. 2308 bytes, 47 lines control 5293 bytes, 62 lines md5sums 248 bytes, 12 lines * postinst #!/bin/sh 397 bytes, 12 lines * prerm #!/bin/sh Package: python3-sqt Source: python-sqt Version: 0.8.0-3ubuntu1 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 500 Depends: libc6 (>= 2.4), python3 (<< 3.9), python3 (>= 3.7~), python3-cutadapt, python3-matplotlib, python3-pysam (>= 0.10), python3-seaborn, python3-xopen, python3:any Recommends: fonts-noto-color-emoji Section: python Priority: optional Homepage: https://bitbucket.org/marcelm/sqt Description: SeQuencing Tools for biological DNA/RNA high-throughput data sqt is a collection of command-line tools for working with high-throughput sequencing data. Conceptionally not fixed to use any particular language, many sqt subcommands are currently implemented in Python. For them, a Python package is available with functions for reading and writing FASTA/FASTQ files, computing alignments, quality trimming, etc. . The following tools are offered: * sqt-coverage -- Compute per-reference statistics such as coverage and GC content * sqt-fastqmod -- FASTQ modifications: shorten, subset, reverse complement, quality trimming. * sqt-fastastats -- Compute N50, min/max length, GC content etc. of a FASTA file * sqt-qualityguess -- Guess quality encoding of one or more FASTA files. * sqt-globalalign -- Compute a global or semiglobal alignment of two strings. * sqt-chars -- Count length of the first word given on the command line. * sqt-sam-cscq -- Add the CS and CQ tags to a SAM file with colorspace reads. * sqt-fastamutate -- Add substitutions and indels to sequences in a FASTA file. * sqt-fastaextract -- Efficiently extract one or more regions from an indexed FASTA file. * sqt-translate -- Replace characters in FASTA files (like the 'tr' command). * sqt-sam-fixn -- Replace all non-ACGT characters within reads in a SAM file. * sqt-sam-insertsize -- Mean and standard deviation of paired-end insert sizes. * sqt-sam-set-op -- Set operations (union, intersection, ...) on SAM/BAM files. * sqt-bam-eof -- Check for the End-Of-File marker in compressed BAM files. * sqt-checkfastqpe -- Check whether two FASTQ files contain correctly paired paired-end data. drwxr-xr-x root/root 0 2020-01-28 11:13 ./ drwxr-xr-x root/root 0 2020-01-28 11:13 ./usr/ drwxr-xr-x root/root 0 2020-01-28 11:13 ./usr/bin/ -rwxr-xr-x root/root 362 2020-01-28 11:13 ./usr/bin/sqt drwxr-xr-x root/root 0 2020-01-28 11:13 ./usr/lib/ drwxr-xr-x root/root 0 2020-01-28 11:13 ./usr/lib/python3/ drwxr-xr-x root/root 0 2020-01-28 11:13 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2020-01-28 11:13 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/ -rw-r--r-- root/root 618 2020-01-28 11:13 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/PKG-INFO -rw-r--r-- root/root 1 2020-01-28 11:13 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/dependency_links.txt -rw-r--r-- root/root 43 2020-01-28 11:13 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/entry_points.txt -rw-r--r-- root/root 0 2020-01-28 11:13 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/requires.txt -rw-r--r-- root/root 4 2020-01-28 11:13 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/top_level.txt drwxr-xr-x root/root 0 2020-01-28 11:13 ./usr/lib/python3/dist-packages/sqt/ -rw-r--r-- root/root 360 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/__init__.py -rw-r--r-- root/root 1401 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/__main__.py -rw-r--r-- root/root 855 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/_codons.py -rw-r--r-- root/root 149504 2020-01-28 11:13 ./usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-arm-linux-gnueabihf.so -rw-r--r-- root/root 145440 2020-01-28 11:13 ./usr/lib/python3/dist-packages/sqt/_helpers.cpython-38-arm-linux-gnueabihf.so -rw-r--r-- root/root 471 2020-01-28 11:13 ./usr/lib/python3/dist-packages/sqt/_version.py -rw-r--r-- root/root 6070 2016-12-01 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08:14 ./usr/share/doc/python3-sqt/copyright drwxr-xr-x root/root 0 2020-01-28 11:13 ./usr/share/man/ drwxr-xr-x root/root 0 2020-01-28 11:13 ./usr/share/man/man1/ -rw-r--r-- root/root 886 2020-01-28 11:13 ./usr/share/man/man1/sqt.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build-Space: 10472 Build-Time: 135 Distribution: focal-proposed Host Architecture: armhf Install-Time: 93 Job: python-sqt_0.8.0-3ubuntu1.dsc Machine Architecture: arm64 Package: python-sqt Package-Time: 230 Source-Version: 0.8.0-3ubuntu1 Space: 10472 Status: successful Version: 0.8.0-3ubuntu1 -------------------------------------------------------------------------------- Finished at 20200128-1120 Build needed 00:03:50, 10472k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18622774 Scanning for processes to kill in build PACKAGEBUILD-18622774