https://launchpad.net/ubuntu/+source/r-bioc-delayedarray/0.12.0+dfsg-1/+build/18079693 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lgw01-amd64-022 4.4.0-166-generic #195-Ubuntu SMP Tue Oct 1 09:35:25 UTC 2019 x86_64 Buildd toolchain package versions: launchpad-buildd_180 python-lpbuildd_180 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 10 Nov 05:10:51 ntpdate[1925]: adjust time server 10.211.37.1 offset 0.019433 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=i386 PACKAGEBUILD-18079693 --image-type chroot /home/buildd/filecache-default/1990644b2ed835f25dcaa4fd2a2c1aec8ecd68bc Creating target for build PACKAGEBUILD-18079693 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=i386 PACKAGEBUILD-18079693 Starting target for build PACKAGEBUILD-18079693 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=i386 PACKAGEBUILD-18079693 'deb http://ftpmaster.internal/ubuntu focal main universe' 'deb http://ftpmaster.internal/ubuntu focal-security main universe' 'deb http://ftpmaster.internal/ubuntu focal-updates main universe' 'deb http://ftpmaster.internal/ubuntu focal-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-18079693 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=i386 PACKAGEBUILD-18079693 Updating target for build PACKAGEBUILD-18079693 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu focal-security InRelease [79.7 kB] Get:3 http://ftpmaster.internal/ubuntu focal-updates InRelease [79.7 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed InRelease [107 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main i386 Packages [956 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main Translation-en [506 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe i386 Packages [8623 kB] Get:8 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5190 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main i386 Packages [62.9 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main Translation-en [40.2 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/universe i386 Packages [285 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/universe Translation-en [215 kB] Fetched 16.4 MB in 4s (4057 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libhogweed4 libnettle6 libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libhogweed5 libnettle7 libperl5.30 perl-modules-5.30 The following packages will be upgraded: base-files binutils binutils-common binutils-i686-linux-gnu bzip2 cpp-9 debianutils g++-9 gcc-9 gcc-9-base hostname libacl1 libapparmor1 libasan5 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libbz2-1.0 libcap-ng0 libcap2 libcc1-0 libcryptsetup12 libdebconfclient0 libgcc-9-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libitm1 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblz4-1 libncurses6 libncursesw6 libp11-kit0 libquadmath0 libselinux1 libsemanage-common libsemanage1 libsqlite3-0 libstdc++-9-dev libstdc++6 libsystemd0 libtinfo6 libubsan1 libudev1 linux-libc-dev lsb-base ncurses-base ncurses-bin perl perl-base systemd systemd-sysv sysvinit-utils 59 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 54.2 MB of archives. After this operation, 41.9 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main i386 base-files i386 11ubuntu1 [60.6 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main i386 debianutils i386 4.9 [86.6 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main i386 hostname i386 3.23 [11.8 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main i386 ncurses-bin i386 6.1+20191019-1ubuntu1 [175 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main i386 perl-modules-5.30 all 5.30.0-9 [2739 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main i386 libperl5.30 i386 5.30.0-9 [3582 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main i386 perl i386 5.30.0-9 [224 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main i386 perl-base i386 5.30.0-9 [1618 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main i386 bzip2 i386 1.0.8-2 [34.6 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main i386 libbz2-1.0 i386 1.0.8-2 [33.0 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main i386 ncurses-base all 6.1+20191019-1ubuntu1 [17.9 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main i386 lsb-base all 11.1.0ubuntu1 [12.2 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main i386 sysvinit-utils i386 2.96-1ubuntu1 [21.6 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main i386 systemd-sysv i386 243-3ubuntu1 [9360 B] Get:15 http://ftpmaster.internal/ubuntu focal/main i386 libacl1 i386 2.2.53-5 [20.3 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main i386 libapparmor1 i386 2.13.3-5ubuntu5 [36.6 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main i386 libaudit-common all 1:2.8.5-2ubuntu2 [4080 B] Get:18 http://ftpmaster.internal/ubuntu focal/main i386 libcap-ng0 i386 0.7.9-2.1 [11.3 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main i386 libaudit1 i386 1:2.8.5-2ubuntu2 [40.5 kB] Get:20 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libcap2 i386 1:2.27-1 [14.6 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main i386 libjson-c4 i386 0.13.1+dfsg-6 [31.0 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main i386 libcryptsetup12 i386 2:2.2.1-1ubuntu1 [206 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main i386 libnettle7 i386 3.5.1+really3.5.1-2 [132 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main i386 libhogweed5 i386 3.5.1+really3.5.1-2 [140 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main i386 libp11-kit0 i386 0.23.18.1-2 [184 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main i386 libgnutls30 i386 3.6.9-5ubuntu2 [796 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main i386 libkmod2 i386 26-3ubuntu1 [47.6 kB] Get:28 http://ftpmaster.internal/ubuntu focal-proposed/main i386 liblz4-1 i386 1.9.2-1 [57.2 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main i386 systemd i386 243-3ubuntu1 [3780 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main i386 libsystemd0 i386 243-3ubuntu1 [282 kB] Get:31 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libcc1-0 i386 9.2.1-19ubuntu1 [50.0 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main i386 binutils-i686-linux-gnu i386 2.33.1-1ubuntu1 [1772 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main i386 libbinutils i386 2.33.1-1ubuntu1 [512 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main i386 binutils-common i386 2.33.1-1ubuntu1 [203 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main i386 binutils i386 2.33.1-1ubuntu1 [3400 B] Get:36 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libgomp1 i386 9.2.1-19ubuntu1 [95.1 kB] Get:37 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libitm1 i386 9.2.1-19ubuntu1 [31.0 kB] Get:38 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libatomic1 i386 9.2.1-19ubuntu1 [9832 B] Get:39 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libasan5 i386 9.2.1-19ubuntu1 [410 kB] Get:40 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libubsan1 i386 9.2.1-19ubuntu1 [149 kB] Get:41 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libquadmath0 i386 9.2.1-19ubuntu1 [230 kB] Get:42 http://ftpmaster.internal/ubuntu focal-proposed/main i386 gcc-9-base i386 9.2.1-19ubuntu1 [19.2 kB] Get:43 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libstdc++6 i386 9.2.1-19ubuntu1 [550 kB] Get:44 http://ftpmaster.internal/ubuntu focal-proposed/main i386 g++-9 i386 9.2.1-19ubuntu1 [10.2 MB] Get:45 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libstdc++-9-dev i386 9.2.1-19ubuntu1 [1755 kB] Get:46 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libgcc-9-dev i386 9.2.1-19ubuntu1 [2362 kB] Get:47 http://ftpmaster.internal/ubuntu focal-proposed/main i386 gcc-9 i386 9.2.1-19ubuntu1 [9799 kB] Get:48 http://ftpmaster.internal/ubuntu focal-proposed/main i386 cpp-9 i386 9.2.1-19ubuntu1 [8986 kB] Get:49 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libgcc1 i386 1:9.2.1-19ubuntu1 [48.2 kB] Get:50 http://ftpmaster.internal/ubuntu focal/main i386 libattr1 i386 1:2.4.48-5 [13.0 kB] Get:51 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libdebconfclient0 i386 0.250ubuntu1 [6456 B] Get:52 http://ftpmaster.internal/ubuntu focal/main i386 libgcrypt20 i386 1.8.5-3ubuntu1 [402 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main i386 libncurses6 i386 6.1+20191019-1ubuntu1 [108 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main i386 libtinfo6 i386 6.1+20191019-1ubuntu1 [87.1 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main i386 libncursesw6 i386 6.1+20191019-1ubuntu1 [143 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main i386 libselinux1 i386 2.9-2build1 [74.8 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main i386 libsemanage-common all 2.9-3build1 [9736 B] Get:58 http://ftpmaster.internal/ubuntu focal/main i386 libsemanage1 i386 2.9-3build1 [94.8 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main i386 libudev1 i386 243-3ubuntu1 [81.3 kB] Get:60 http://ftpmaster.internal/ubuntu focal/main i386 libsqlite3-0 i386 3.30.1-1 [576 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main i386 liblockfile-bin i386 1.16-1.1 [12.1 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main i386 liblockfile1 i386 1.16-1.1 [7016 B] Get:63 http://ftpmaster.internal/ubuntu focal-proposed/main i386 linux-libc-dev i386 5.3.0-21.22 [1085 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 54.2 MB in 8s (7153 kB/s) (Reading database ... 12732 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu1_i386.deb ... Unpacking base-files (11ubuntu1) over (10.2ubuntu7) ... Setting up base-files (11ubuntu1) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Updating /root/.profile to current default. (Reading database ... 12732 files and directories currently installed.) Preparing to unpack .../debianutils_4.9_i386.deb ... Unpacking debianutils (4.9) over (4.8.6.3) ... Setting up debianutils (4.9) ... (Reading database ... 12732 files and directories currently installed.) Preparing to unpack .../hostname_3.23_i386.deb ... Unpacking hostname (3.23) over (3.22) ... Setting up hostname (3.23) ... (Reading database ... 12732 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.1+20191019-1ubuntu1_i386.deb ... Unpacking ncurses-bin (6.1+20191019-1ubuntu1) over (6.1+20190803-1ubuntu1) ... Setting up ncurses-bin (6.1+20191019-1ubuntu1) ... (Reading database ... 12732 files and directories currently installed.) Preparing to unpack .../perl_5.30.0-9_i386.deb ... Unpacking perl (5.30.0-9) over (5.28.1-6build1) ... Replacing files in old package perl-base (5.28.1-6build1) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../perl-modules-5.30_5.30.0-9_all.deb ... Unpacking perl-modules-5.30 (5.30.0-9) ... Selecting previously unselected package libperl5.30:i386. Preparing to unpack .../libperl5.30_5.30.0-9_i386.deb ... Unpacking libperl5.30:i386 (5.30.0-9) ... Preparing to unpack .../perl-base_5.30.0-9_i386.deb ... Unpacking perl-base (5.30.0-9) over (5.28.1-6build1) ... Setting up perl-base (5.30.0-9) ... (Reading database ... 14635 files and directories currently installed.) Preparing to unpack .../bzip2_1.0.8-2_i386.deb ... Unpacking bzip2 (1.0.8-2) over (1.0.6-9.2) ... Preparing to unpack .../libbz2-1.0_1.0.8-2_i386.deb ... Unpacking libbz2-1.0:i386 (1.0.8-2) over (1.0.6-9.2) ... Setting up libbz2-1.0:i386 (1.0.8-2) ... (Reading database ... 14635 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.1+20191019-1ubuntu1_all.deb ... Unpacking ncurses-base (6.1+20191019-1ubuntu1) over (6.1+20190803-1ubuntu1) ... Setting up ncurses-base (6.1+20191019-1ubuntu1) ... (Reading database ... 14635 files and directories currently installed.) Preparing to unpack .../lsb-base_11.1.0ubuntu1_all.deb ... Unpacking lsb-base (11.1.0ubuntu1) over (11.0.1ubuntu1) ... Setting up lsb-base (11.1.0ubuntu1) ... (Reading database ... 14634 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_2.96-1ubuntu1_i386.deb ... Unpacking sysvinit-utils (2.96-1ubuntu1) over (2.95-5ubuntu2) ... Setting up sysvinit-utils (2.96-1ubuntu1) ... (Reading database ... 14634 files and directories currently installed.) Preparing to unpack .../systemd-sysv_243-3ubuntu1_i386.deb ... Unpacking systemd-sysv (243-3ubuntu1) over (242-7ubuntu3) ... Preparing to unpack .../libacl1_2.2.53-5_i386.deb ... Unpacking libacl1:i386 (2.2.53-5) over (2.2.53-4) ... Setting up libacl1:i386 (2.2.53-5) ... (Reading database ... 14634 files and directories currently installed.) Preparing to unpack .../libapparmor1_2.13.3-5ubuntu5_i386.deb ... Unpacking libapparmor1:i386 (2.13.3-5ubuntu5) over (2.13.3-5ubuntu1) ... Preparing to unpack .../libaudit-common_1%3a2.8.5-2ubuntu2_all.deb ... Unpacking libaudit-common (1:2.8.5-2ubuntu2) over (1:2.8.5-2ubuntu1) ... Setting up libaudit-common (1:2.8.5-2ubuntu2) ... (Reading database ... 14634 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.7.9-2.1_i386.deb ... Unpacking libcap-ng0:i386 (0.7.9-2.1) over (0.7.9-2) ... Setting up libcap-ng0:i386 (0.7.9-2.1) ... (Reading database ... 14634 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a2.8.5-2ubuntu2_i386.deb ... Unpacking libaudit1:i386 (1:2.8.5-2ubuntu2) over (1:2.8.5-2ubuntu1) ... Setting up libaudit1:i386 (1:2.8.5-2ubuntu2) ... (Reading database ... 14634 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.27-1_i386.deb ... Unpacking libcap2:i386 (1:2.27-1) over (1:2.25-2) ... Preparing to unpack .../libjson-c4_0.13.1+dfsg-6_i386.deb ... Unpacking libjson-c4:i386 (0.13.1+dfsg-6) over (0.13.1+dfsg-4) ... Preparing to unpack .../libcryptsetup12_2%3a2.2.1-1ubuntu1_i386.deb ... Unpacking libcryptsetup12:i386 (2:2.2.1-1ubuntu1) over (2:2.2.0-3ubuntu1) ... Selecting previously unselected package libnettle7:i386. Preparing to unpack .../libnettle7_3.5.1+really3.5.1-2_i386.deb ... Unpacking libnettle7:i386 (3.5.1+really3.5.1-2) ... Setting up libnettle7:i386 (3.5.1+really3.5.1-2) ... Selecting previously unselected package libhogweed5:i386. (Reading database ... 14641 files and directories currently installed.) Preparing to unpack .../libhogweed5_3.5.1+really3.5.1-2_i386.deb ... Unpacking libhogweed5:i386 (3.5.1+really3.5.1-2) ... Setting up libhogweed5:i386 (3.5.1+really3.5.1-2) ... (Reading database ... 14644 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.23.18.1-2_i386.deb ... Unpacking libp11-kit0:i386 (0.23.18.1-2) over (0.23.17-2) ... Setting up libp11-kit0:i386 (0.23.18.1-2) ... (Reading database ... 14644 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.6.9-5ubuntu2_i386.deb ... Unpacking libgnutls30:i386 (3.6.9-5ubuntu2) over (3.6.9-5ubuntu1) ... Setting up libgnutls30:i386 (3.6.9-5ubuntu2) ... (Reading database ... 14644 files and directories currently installed.) Preparing to unpack .../libkmod2_26-3ubuntu1_i386.deb ... Unpacking libkmod2:i386 (26-3ubuntu1) over (26-1ubuntu1) ... Preparing to unpack .../liblz4-1_1.9.2-1_i386.deb ... Unpacking liblz4-1:i386 (1.9.2-1) over (1.9.1-1) ... Setting up liblz4-1:i386 (1.9.2-1) ... (Reading database ... 14644 files and directories currently installed.) Preparing to unpack .../systemd_243-3ubuntu1_i386.deb ... Unpacking systemd (243-3ubuntu1) over (242-7ubuntu3) ... Preparing to unpack .../libsystemd0_243-3ubuntu1_i386.deb ... Unpacking libsystemd0:i386 (243-3ubuntu1) over (242-7ubuntu3) ... Setting up libsystemd0:i386 (243-3ubuntu1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../00-libcc1-0_9.2.1-19ubuntu1_i386.deb ... Unpacking libcc1-0:i386 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../01-binutils-i686-linux-gnu_2.33.1-1ubuntu1_i386.deb ... Unpacking binutils-i686-linux-gnu (2.33.1-1ubuntu1) over (2.33-2ubuntu1) ... Preparing to unpack .../02-libbinutils_2.33.1-1ubuntu1_i386.deb ... Unpacking libbinutils:i386 (2.33.1-1ubuntu1) over (2.33-2ubuntu1) ... Preparing to unpack .../03-binutils-common_2.33.1-1ubuntu1_i386.deb ... Unpacking binutils-common:i386 (2.33.1-1ubuntu1) over (2.33-2ubuntu1) ... Preparing to unpack .../04-binutils_2.33.1-1ubuntu1_i386.deb ... Unpacking binutils (2.33.1-1ubuntu1) over (2.33-2ubuntu1) ... Preparing to unpack .../05-libgomp1_9.2.1-19ubuntu1_i386.deb ... Unpacking libgomp1:i386 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../06-libitm1_9.2.1-19ubuntu1_i386.deb ... Unpacking libitm1:i386 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../07-libatomic1_9.2.1-19ubuntu1_i386.deb ... Unpacking libatomic1:i386 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../08-libasan5_9.2.1-19ubuntu1_i386.deb ... Unpacking libasan5:i386 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../09-libubsan1_9.2.1-19ubuntu1_i386.deb ... Unpacking libubsan1:i386 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../10-libquadmath0_9.2.1-19ubuntu1_i386.deb ... Unpacking libquadmath0:i386 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../11-gcc-9-base_9.2.1-19ubuntu1_i386.deb ... Unpacking gcc-9-base:i386 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Setting up gcc-9-base:i386 (9.2.1-19ubuntu1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../libstdc++6_9.2.1-19ubuntu1_i386.deb ... Unpacking libstdc++6:i386 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Setting up libstdc++6:i386 (9.2.1-19ubuntu1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../0-g++-9_9.2.1-19ubuntu1_i386.deb ... Unpacking g++-9 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../1-libstdc++-9-dev_9.2.1-19ubuntu1_i386.deb ... Unpacking libstdc++-9-dev:i386 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../2-libgcc-9-dev_9.2.1-19ubuntu1_i386.deb ... Unpacking libgcc-9-dev:i386 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../3-gcc-9_9.2.1-19ubuntu1_i386.deb ... Unpacking gcc-9 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../4-cpp-9_9.2.1-19ubuntu1_i386.deb ... Unpacking cpp-9 (9.2.1-19ubuntu1) over (9.2.1-9ubuntu2) ... Preparing to unpack .../5-libgcc1_1%3a9.2.1-19ubuntu1_i386.deb ... Unpacking libgcc1:i386 (1:9.2.1-19ubuntu1) over (1:9.2.1-9ubuntu2) ... Setting up libgcc1:i386 (1:9.2.1-19ubuntu1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../libattr1_1%3a2.4.48-5_i386.deb ... Unpacking libattr1:i386 (1:2.4.48-5) over (1:2.4.48-4) ... Setting up libattr1:i386 (1:2.4.48-5) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.250ubuntu1_i386.deb ... Unpacking libdebconfclient0:i386 (0.250ubuntu1) over (0.249ubuntu1) ... Setting up libdebconfclient0:i386 (0.250ubuntu1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.8.5-3ubuntu1_i386.deb ... Unpacking libgcrypt20:i386 (1.8.5-3ubuntu1) over (1.8.4-5ubuntu2) ... Setting up libgcrypt20:i386 (1.8.5-3ubuntu1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../libncurses6_6.1+20191019-1ubuntu1_i386.deb ... Unpacking libncurses6:i386 (6.1+20191019-1ubuntu1) over (6.1+20190803-1ubuntu1) ... Preparing to unpack .../libtinfo6_6.1+20191019-1ubuntu1_i386.deb ... Unpacking libtinfo6:i386 (6.1+20191019-1ubuntu1) over (6.1+20190803-1ubuntu1) ... Setting up libtinfo6:i386 (6.1+20191019-1ubuntu1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.1+20191019-1ubuntu1_i386.deb ... Unpacking libncursesw6:i386 (6.1+20191019-1ubuntu1) over (6.1+20190803-1ubuntu1) ... Setting up libncursesw6:i386 (6.1+20191019-1ubuntu1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../libselinux1_2.9-2build1_i386.deb ... Unpacking libselinux1:i386 (2.9-2build1) over (2.9-2) ... Setting up libselinux1:i386 (2.9-2build1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../libsemanage-common_2.9-3build1_all.deb ... Unpacking libsemanage-common (2.9-3build1) over (2.9-3) ... Setting up libsemanage-common (2.9-3build1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../libsemanage1_2.9-3build1_i386.deb ... Unpacking libsemanage1:i386 (2.9-3build1) over (2.9-3) ... Setting up libsemanage1:i386 (2.9-3build1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../libudev1_243-3ubuntu1_i386.deb ... Unpacking libudev1:i386 (243-3ubuntu1) over (242-7ubuntu3) ... Setting up libudev1:i386 (243-3ubuntu1) ... (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../libsqlite3-0_3.30.1-1_i386.deb ... Unpacking libsqlite3-0:i386 (3.30.1-1) over (3.29.0-2) ... Preparing to unpack .../liblockfile-bin_1.16-1.1_i386.deb ... Unpacking liblockfile-bin (1.16-1.1) over (1.15-1) ... Preparing to unpack .../liblockfile1_1.16-1.1_i386.deb ... Unpacking liblockfile1:i386 (1.16-1.1) over (1.15-1) ... Preparing to unpack .../linux-libc-dev_5.3.0-21.22_i386.deb ... Unpacking linux-libc-dev:i386 (5.3.0-21.22) over (5.3.0-18.19) ... Setting up libapparmor1:i386 (2.13.3-5ubuntu5) ... Setting up liblockfile-bin (1.16-1.1) ... Setting up perl-modules-5.30 (5.30.0-9) ... Setting up libsqlite3-0:i386 (3.30.1-1) ... Setting up binutils-common:i386 (2.33.1-1ubuntu1) ... Setting up linux-libc-dev:i386 (5.3.0-21.22) ... Setting up libgomp1:i386 (9.2.1-19ubuntu1) ... Setting up bzip2 (1.0.8-2) ... Setting up libcap2:i386 (1:2.27-1) ... Setting up libasan5:i386 (9.2.1-19ubuntu1) ... Setting up libncurses6:i386 (6.1+20191019-1ubuntu1) ... Setting up libquadmath0:i386 (9.2.1-19ubuntu1) ... Setting up libatomic1:i386 (9.2.1-19ubuntu1) ... Setting up libubsan1:i386 (9.2.1-19ubuntu1) ... Setting up cpp-9 (9.2.1-19ubuntu1) ... Setting up libperl5.30:i386 (5.30.0-9) ... Setting up liblockfile1:i386 (1.16-1.1) ... Setting up libjson-c4:i386 (0.13.1+dfsg-6) ... Setting up libbinutils:i386 (2.33.1-1ubuntu1) ... Setting up libcc1-0:i386 (9.2.1-19ubuntu1) ... Setting up libitm1:i386 (9.2.1-19ubuntu1) ... Setting up libkmod2:i386 (26-3ubuntu1) ... Setting up binutils-i686-linux-gnu (2.33.1-1ubuntu1) ... Setting up binutils (2.33.1-1ubuntu1) ... Setting up libgcc-9-dev:i386 (9.2.1-19ubuntu1) ... Setting up perl (5.30.0-9) ... Setting up libcryptsetup12:i386 (2:2.2.1-1ubuntu1) ... Setting up gcc-9 (9.2.1-19ubuntu1) ... Setting up libstdc++-9-dev:i386 (9.2.1-19ubuntu1) ... Setting up systemd (243-3ubuntu1) ... Installing new version of config file /etc/dhcp/dhclient-enter-hooks.d/resolved ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from KVM UUID. Setting up g++-9 (9.2.1-19ubuntu1) ... Setting up systemd-sysv (243-3ubuntu1) ... Processing triggers for libc-bin (2.30-0ubuntu2) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18079693 i386 focal-proposed -c chroot:build-PACKAGEBUILD-18079693 --arch=i386 --dist=focal-proposed --nolog r-bioc-delayedarray_0.12.0+dfsg-1.dsc Initiating build PACKAGEBUILD-18079693 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-166-generic #195-Ubuntu SMP Tue Oct 1 09:35:25 UTC 2019 i686 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-022.buildd +==============================================================================+ | r-bioc-delayedarray 0.12.0+dfsg-1 (i386) 10 Nov 2019 05:11 | +==============================================================================+ Package: r-bioc-delayedarray Version: 0.12.0+dfsg-1 Source Version: 0.12.0+dfsg-1 Distribution: focal-proposed Machine Architecture: amd64 Host Architecture: i386 Build Architecture: i386 I: NOTICE: Log filtering will replace 'build/r-bioc-delayedarray-tIPYEW/r-bioc-delayedarray-0.12.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/r-bioc-delayedarray-tIPYEW' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18079693/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- r-bioc-delayedarray_0.12.0+dfsg-1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-zGz_kF/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-zGz_kF/apt_archive ./ InRelease Get:2 copy:/<>/resolver-zGz_kF/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-zGz_kF/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-zGz_kF/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-zGz_kF/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed4 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-zGz_kF/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-cran-matrixstats, r-bioc-biocgenerics (>= 0.31.5), r-bioc-s4vectors (>= 0.21.7), r-bioc-iranges (>= 2.17.3), r-bioc-biocparallel, r-cran-matrix Filtered Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-cran-matrixstats, r-bioc-biocgenerics (>= 0.31.5), r-bioc-s4vectors (>= 0.21.7), r-bioc-iranges (>= 2.17.3), r-bioc-biocparallel, r-cran-matrix dpkg-deb: building package 'sbuild-build-depends-r-bioc-delayedarray-dummy' in '/<>/resolver-aFscnZ/apt_archive/sbuild-build-depends-r-bioc-delayedarray-dummy.deb'. Ign:1 copy:/<>/resolver-aFscnZ/apt_archive ./ InRelease Get:2 copy:/<>/resolver-aFscnZ/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-aFscnZ/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-aFscnZ/apt_archive ./ Sources [301 B] Get:5 copy:/<>/resolver-aFscnZ/apt_archive ./ Packages [619 B] Fetched 3039 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install r-bioc-delayedarray build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed4 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-9 groff-base icu-devtools intltool-debian libarchive-zip-perl libasn1-8-heimdal libblas-dev libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu-dev libicu63 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common liblzma-dev libmagic-mgc libmagic1 libncurses-dev libncurses5-dev libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix0 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5 libreadline-dev libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh-4 libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtool libuchardet0 libwebp6 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db pkg-config po-debconf r-base-core r-base-dev r-bioc-biocgenerics r-bioc-biocparallel r-bioc-iranges r-bioc-s4vectors r-cran-formatr r-cran-futile.logger r-cran-futile.options r-cran-lambda.r r-cran-lattice r-cran-matrix r-cran-matrixstats r-cran-snow ucf unzip x11-common xauth xdg-utils zip zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation debtags dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-9-multilib gfortran-9-doc libgfortran5-dbg libcoarrays-dev groff liblapack-doc krb5-doc krb5-user icu-doc liblzma-doc ncurses-doc readline-doc tcl8.6 tk8.6 libtool-doc gcj-jdk m4-doc apparmor less www-browser libmail-box-perl elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo r-bioc-biobase r-bioc-genomicranges r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc r-bioc-variantannotation r-bioc-genomicalignments r-bioc-shortread r-cran-codetools r-cran-knitr r-cran-data.table r-bioc-genomicfeatures r-bioc-summarizedexperiment r-bioc-graph r-cran-shiny r-cran-rmarkdown r-cran-jsonlite r-cran-base64enc r-cran-ggplot2 r-cran-rmpi r-cran-rsprng r-cran-rlecuyer Recommended packages: devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libpng-tools publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl r-recommended r-doc-html r-cran-runit r-cran-batchjobs r-cran-doparallel r-bioc-rsamtools r-cran-batchtools r-cran-rmpi r-bioc-xvector r-bioc-genomicranges r-cran-testit r-cran-codetools r-cran-survival r-cran-testthat libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-9 groff-base icu-devtools intltool-debian libarchive-zip-perl libasn1-8-heimdal libblas-dev libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu-dev libicu63 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common liblzma-dev libmagic-mgc libmagic1 libncurses-dev libncurses5-dev libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix0 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5 libreadline-dev libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh-4 libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtool libuchardet0 libwebp6 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db pkg-config po-debconf r-base-core r-base-dev r-bioc-biocgenerics r-bioc-biocparallel r-bioc-iranges r-bioc-s4vectors r-cran-formatr r-cran-futile.logger r-cran-futile.options r-cran-lambda.r r-cran-lattice r-cran-matrix r-cran-matrixstats r-cran-snow sbuild-build-depends-r-bioc-delayedarray-dummy ucf unzip x11-common xauth xdg-utils zip zlib1g-dev 0 upgraded, 151 newly installed, 0 to remove and 0 not upgraded. Need to get 93.0 MB of archives. After this operation, 281 MB of additional disk space will be used. Get:1 copy:/<>/resolver-aFscnZ/apt_archive ./ sbuild-build-depends-r-bioc-delayedarray-dummy 0.invalid.0 [948 B] Get:2 http://ftpmaster.internal/ubuntu focal/main i386 libbsd0 i386 0.10.0-1 [49.8 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main i386 bsdmainutils i386 11.1.2ubuntu2 [183 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main i386 groff-base i386 1.22.4-3 [879 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main i386 libpipeline1 i386 1.5.1-2 [28.0 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main i386 man-db i386 2.9.0-1 [1128 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main i386 libmagic-mgc i386 1:5.37-6 [209 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main i386 libmagic1 i386 1:5.37-6 [81.9 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main i386 file i386 1:5.37-6 [23.2 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main i386 libelf1 i386 0.176-1.1 [50.1 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main i386 libexpat1 i386 2.2.9-1 [73.7 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main i386 libfribidi0 i386 1.0.7-1 [24.1 kB] Get:14 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libglib2.0-0 i386 2.63.1-1 [1341 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main i386 libicu63 i386 63.2-2 [8442 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main i386 libxml2 i386 2.9.4+dfsg1-7ubuntu5 [686 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main i386 ucf all 3.0038+nmu1 [51.6 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main i386 gettext-base i386 0.19.8.1-9 [51.2 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main i386 libkrb5support0 i386 1.17-6 [34.5 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main i386 libk5crypto3 i386 1.17-6 [83.9 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main i386 libkeyutils1 i386 1.6-6ubuntu1 [10.6 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main i386 libkrb5-3 i386 1.17-6 [357 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main i386 libgssapi-krb5-2 i386 1.17-6 [131 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main i386 libpsl5 i386 0.20.2-2 [50.7 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main i386 libxau6 i386 1:1.0.9-0ubuntu1 [7804 B] Get:26 http://ftpmaster.internal/ubuntu focal/main i386 libxdmcp6 i386 1:1.1.3-0ubuntu1 [11.0 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main i386 libxcb1 i386 1.13.1-2 [49.9 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main i386 libx11-data all 2:1.6.8-1 [113 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main i386 libx11-6 i386 2:1.6.8-1 [598 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main i386 libxext6 i386 2:1.3.4-0ubuntu1 [31.5 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main i386 libxmuu1 i386 2:1.1.3-0ubuntu1 [9944 B] Get:32 http://ftpmaster.internal/ubuntu focal/main i386 xauth i386 1:1.1-0ubuntu1 [25.5 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main i386 libsigsegv2 i386 2.12-2 [14.2 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main i386 m4 i386 1.4.18-4 [202 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main i386 autoconf all 2.69-11ubuntu1 [321 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main i386 autotools-dev all 20180224.1 [39.6 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main i386 automake all 1:1.16.1-4ubuntu3 [522 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main i386 autopoint all 0.19.8.1-9 [412 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main i386 dctrl-tools i386 2.24-3 [63.0 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main i386 libtool all 2.4.6-11 [194 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main i386 dh-autoreconf all 19 [16.1 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main i386 libdebhelper-perl all 12.7.1ubuntu1 [52.0 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main i386 libarchive-zip-perl all 1.67-1 [90.4 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main i386 libsub-override-perl all 0.09-2 [9532 B] Get:45 http://ftpmaster.internal/ubuntu focal/main i386 libfile-stripnondeterminism-perl all 1.6.2-1 [16.1 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main i386 dh-strip-nondeterminism all 1.6.2-1 [5228 B] Get:47 http://ftpmaster.internal/ubuntu focal/main i386 dwz i386 0.13-2 [150 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main i386 libcroco3 i386 0.6.13-1 [88.7 kB] Get:49 http://ftpmaster.internal/ubuntu focal/main i386 gettext i386 0.19.8.1-9 [905 kB] Get:50 http://ftpmaster.internal/ubuntu focal/main i386 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main i386 po-debconf all 1.0.21 [233 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main i386 debhelper all 12.7.1ubuntu1 [875 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main i386 zip i386 3.0-11build1 [160 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main i386 unzip i386 6.0-25ubuntu1 [168 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main i386 libpaper1 i386 1.1.28 [13.0 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main i386 libpaper-utils i386 1.1.28 [8596 B] Get:57 http://ftpmaster.internal/ubuntu focal/main i386 xdg-utils all 1.1.3-1ubuntu2 [60.5 kB] Get:58 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libblas3 i386 3.8.0-8 [133 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main i386 libfreetype6 i386 2.10.1-2 [356 kB] Get:60 http://ftpmaster.internal/ubuntu focal/main i386 fonts-dejavu-core all 2.37-1 [1041 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main i386 fontconfig-config all 2.13.1-2ubuntu2 [28.9 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main i386 libfontconfig1 i386 2.13.1-2ubuntu2 [124 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main i386 libpixman-1-0 i386 0.38.4-0ubuntu1 [230 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main i386 libxcb-render0 i386 1.13.1-2 [15.9 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main i386 libxcb-shm0 i386 1.13.1-2 [5744 B] Get:66 http://ftpmaster.internal/ubuntu focal/main i386 libxrender1 i386 1:0.9.10-1 [19.9 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main i386 libcairo2 i386 1.16.0-4 [638 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main i386 libroken18-heimdal i386 7.5.0+dfsg-3build1 [45.4 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main i386 libasn1-8-heimdal i386 7.5.0+dfsg-3build1 [187 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main i386 libheimbase1-heimdal i386 7.5.0+dfsg-3build1 [32.5 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main i386 libhcrypto4-heimdal i386 7.5.0+dfsg-3build1 [94.6 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main i386 libwind0-heimdal i386 7.5.0+dfsg-3build1 [48.3 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main i386 libhx509-5-heimdal i386 7.5.0+dfsg-3build1 [117 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main i386 libkrb5-26-heimdal i386 7.5.0+dfsg-3build1 [232 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main i386 libheimntlm0-heimdal i386 7.5.0+dfsg-3build1 [16.4 kB] Get:76 http://ftpmaster.internal/ubuntu focal/main i386 libgssapi3-heimdal i386 7.5.0+dfsg-3build1 [108 kB] Get:77 http://ftpmaster.internal/ubuntu focal/main i386 libsasl2-modules-db i386 2.1.27+dfsg-1build3 [15.7 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main i386 libsasl2-2 i386 2.1.27+dfsg-1build3 [53.0 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main i386 libldap-common all 2.4.48+dfsg-1ubuntu3 [17.3 kB] Get:80 http://ftpmaster.internal/ubuntu focal/main i386 libldap-2.4-2 i386 2.4.48+dfsg-1ubuntu3 [168 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main i386 libnghttp2-14 i386 1.39.2-1 [86.4 kB] Get:82 http://ftpmaster.internal/ubuntu focal/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2build1 [58.4 kB] Get:83 http://ftpmaster.internal/ubuntu focal/main i386 libssh-4 i386 0.9.0-1ubuntu1 [214 kB] Get:84 http://ftpmaster.internal/ubuntu focal/main i386 libcurl4 i386 7.65.3-1ubuntu4 [259 kB] Get:85 http://ftpmaster.internal/ubuntu focal/main i386 libjpeg-turbo8 i386 2.0.3-0ubuntu1 [127 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main i386 libjpeg8 i386 8c-2ubuntu8 [2188 B] Get:87 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libgfortran5 i386 9.2.1-19ubuntu1 [600 kB] Get:88 http://ftpmaster.internal/ubuntu focal-proposed/main i386 liblapack3 i386 3.8.0-8 [1916 kB] Get:89 http://ftpmaster.internal/ubuntu focal/main i386 fontconfig i386 2.13.1-2ubuntu2 [171 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main i386 libgraphite2-3 i386 1.3.13-11 [76.5 kB] Get:91 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libharfbuzz0b i386 2.6.4-1 [406 kB] Get:92 http://ftpmaster.internal/ubuntu focal/main i386 libthai-data all 0.1.28-3 [134 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main i386 libdatrie1 i386 0.2.12-3 [20.2 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main i386 libthai0 i386 0.1.28-3 [19.1 kB] Get:95 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libpango-1.0-0 i386 1.44.7-1 [167 kB] Get:96 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libpangoft2-1.0-0 i386 1.44.7-1 [37.5 kB] Get:97 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libpangocairo-1.0-0 i386 1.44.7-1 [26.1 kB] Get:98 http://ftpmaster.internal/ubuntu focal/main i386 libtcl8.6 i386 8.6.9+dfsg-2 [957 kB] Get:99 http://ftpmaster.internal/ubuntu focal/main i386 libjbig0 i386 2.1-3.1build1 [27.3 kB] Get:100 http://ftpmaster.internal/ubuntu focal/main i386 libwebp6 i386 0.6.1-2 [197 kB] Get:101 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libtiff5 i386 4.1.0-1 [174 kB] Get:102 http://ftpmaster.internal/ubuntu focal/main i386 libxft2 i386 2.3.3-0ubuntu1 [40.0 kB] Get:103 http://ftpmaster.internal/ubuntu focal/main i386 x11-common all 1:7.7+19ubuntu12 [22.4 kB] Get:104 http://ftpmaster.internal/ubuntu focal/main i386 libxss1 i386 1:1.2.3-1 [8408 B] Get:105 http://ftpmaster.internal/ubuntu focal/main i386 libtk8.6 i386 8.6.9-2 [748 kB] Get:106 http://ftpmaster.internal/ubuntu focal/main i386 libice6 i386 2:1.0.10-0ubuntu1 [43.4 kB] Get:107 http://ftpmaster.internal/ubuntu focal/main i386 libsm6 i386 2:1.2.3-1 [16.7 kB] Get:108 http://ftpmaster.internal/ubuntu focal/main i386 libxt6 i386 1:1.1.5-1 [164 kB] Get:109 http://ftpmaster.internal/ubuntu focal/universe i386 r-base-core i386 3.6.1-7 [24.5 MB] Get:110 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libgfortran-9-dev i386 9.2.1-19ubuntu1 [665 kB] Get:111 http://ftpmaster.internal/ubuntu focal-proposed/main i386 gfortran-9 i386 9.2.1-19ubuntu1 [9612 kB] Get:112 http://ftpmaster.internal/ubuntu focal/main i386 gfortran i386 4:9.2.1-3.1ubuntu1 [1384 B] Get:113 http://ftpmaster.internal/ubuntu focal-proposed/main i386 libblas-dev i386 3.8.0-8 [141 kB] Get:114 http://ftpmaster.internal/ubuntu focal-proposed/main i386 liblapack-dev i386 3.8.0-8 [3692 kB] Get:115 http://ftpmaster.internal/ubuntu focal/main i386 libncurses-dev i386 6.1+20191019-1ubuntu1 [366 kB] Get:116 http://ftpmaster.internal/ubuntu focal/main i386 libncurses5-dev i386 6.1+20191019-1ubuntu1 [992 B] Get:117 http://ftpmaster.internal/ubuntu focal/main i386 libreadline-dev i386 8.0-3 [154 kB] Get:118 http://ftpmaster.internal/ubuntu focal/main i386 libjpeg-turbo8-dev i386 2.0.3-0ubuntu1 [259 kB] Get:119 http://ftpmaster.internal/ubuntu focal/main i386 libjpeg8-dev i386 8c-2ubuntu8 [1546 B] Get:120 http://ftpmaster.internal/ubuntu focal/main i386 libjpeg-dev i386 8c-2ubuntu8 [1544 B] Get:121 http://ftpmaster.internal/ubuntu focal/main i386 libpcre2-16-0 i386 10.32-5 [170 kB] Get:122 http://ftpmaster.internal/ubuntu focal/main i386 libpcre2-32-0 i386 10.32-5 [162 kB] Get:123 http://ftpmaster.internal/ubuntu focal/main i386 libpcre2-posix0 i386 10.32-5 [5728 B] Get:124 http://ftpmaster.internal/ubuntu focal/main i386 libpcre2-dev i386 10.32-5 [639 kB] Get:125 http://ftpmaster.internal/ubuntu focal/main i386 libpcre16-3 i386 2:8.39-12 [148 kB] Get:126 http://ftpmaster.internal/ubuntu focal/main i386 libpcre32-3 i386 2:8.39-12 [140 kB] Get:127 http://ftpmaster.internal/ubuntu focal/main i386 libpcrecpp0v5 i386 2:8.39-12 [16.5 kB] Get:128 http://ftpmaster.internal/ubuntu focal/main i386 libpcre3-dev i386 2:8.39-12 [546 kB] Get:129 http://ftpmaster.internal/ubuntu focal/main i386 zlib1g-dev i386 1:1.2.11.dfsg-1ubuntu3 [175 kB] Get:130 http://ftpmaster.internal/ubuntu focal/main i386 libpng-dev i386 1.6.37-1 [185 kB] Get:131 http://ftpmaster.internal/ubuntu focal/main i386 libbz2-dev i386 1.0.8-2 [31.5 kB] Get:132 http://ftpmaster.internal/ubuntu focal/main i386 liblzma-dev i386 5.2.4-1 [155 kB] Get:133 http://ftpmaster.internal/ubuntu focal/main i386 icu-devtools i386 63.2-2 [187 kB] Get:134 http://ftpmaster.internal/ubuntu focal/main i386 libicu-dev i386 63.2-2 [9373 kB] Get:135 http://ftpmaster.internal/ubuntu focal/main i386 pkg-config i386 0.29.1-0ubuntu3 [46.4 kB] Get:136 http://ftpmaster.internal/ubuntu focal/universe i386 r-base-dev all 3.6.1-7 [4528 B] Get:137 http://ftpmaster.internal/ubuntu focal/main i386 libfile-which-perl all 1.23-1 [13.8 kB] Get:138 http://ftpmaster.internal/ubuntu focal/universe i386 libswitch-perl all 2.17-2 [18.8 kB] Get:139 http://ftpmaster.internal/ubuntu focal/universe i386 dh-r all 20190917 [32.7 kB] Get:140 http://ftpmaster.internal/ubuntu focal-proposed/universe i386 r-bioc-biocgenerics all 0.32.0-1 [639 kB] Get:141 http://ftpmaster.internal/ubuntu focal/universe i386 r-cran-formatr all 1.7-1 [147 kB] Get:142 http://ftpmaster.internal/ubuntu focal/universe i386 r-cran-lambda.r all 1.2.4-1 [119 kB] Get:143 http://ftpmaster.internal/ubuntu focal/universe i386 r-cran-futile.options all 1.0.1-2 [19.8 kB] Get:144 http://ftpmaster.internal/ubuntu focal/universe i386 r-cran-futile.logger all 1.4.3-3 [102 kB] Get:145 http://ftpmaster.internal/ubuntu focal/universe i386 r-cran-snow all 1:0.4.3-1 [107 kB] Get:146 http://ftpmaster.internal/ubuntu focal-proposed/universe i386 r-bioc-biocparallel i386 1.20.0-1 [1073 kB] Get:147 http://ftpmaster.internal/ubuntu focal-proposed/universe i386 r-bioc-s4vectors i386 0.24.0-1 [1944 kB] Get:148 http://ftpmaster.internal/ubuntu focal-proposed/universe i386 r-bioc-iranges i386 2.20.0-1 [2204 kB] Get:149 http://ftpmaster.internal/ubuntu focal/universe i386 r-cran-lattice i386 0.20-38-1 [1110 kB] Get:150 http://ftpmaster.internal/ubuntu focal/universe i386 r-cran-matrix i386 1.2-17-2 [3448 kB] Get:151 http://ftpmaster.internal/ubuntu focal/universe i386 r-cran-matrixstats i386 0.55.0-1 [633 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 93.0 MB in 6s (16.4 MB/s) Selecting previously unselected package libbsd0:i386. (Reading database ... 14662 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_i386.deb ... Unpacking libbsd0:i386 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2ubuntu2_i386.deb ... Unpacking bsdmainutils (11.1.2ubuntu2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../002-libuchardet0_0.0.6-3_i386.deb ... Unpacking libuchardet0:i386 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-3_i386.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../004-libpipeline1_1.5.1-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.0-1_i386.deb ... Unpacking man-db (2.9.0-1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../006-libmagic-mgc_1%3a5.37-6_i386.deb ... Unpacking libmagic-mgc (1:5.37-6) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../007-libmagic1_1%3a5.37-6_i386.deb ... Unpacking libmagic1:i386 (1:5.37-6) ... Selecting previously unselected package file. Preparing to unpack .../008-file_1%3a5.37-6_i386.deb ... Unpacking file (1:5.37-6) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../009-libelf1_0.176-1.1_i386.deb ... Unpacking libelf1:i386 (0.176-1.1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../010-libexpat1_2.2.9-1_i386.deb ... Unpacking libexpat1:i386 (2.2.9-1) ... Selecting previously unselected package libfribidi0:i386. Preparing to unpack .../011-libfribidi0_1.0.7-1_i386.deb ... Unpacking libfribidi0:i386 (1.0.7-1) ... Selecting previously unselected package libglib2.0-0:i386. Preparing to unpack .../012-libglib2.0-0_2.63.1-1_i386.deb ... Unpacking libglib2.0-0:i386 (2.63.1-1) ... Selecting previously unselected package libicu63:i386. Preparing to unpack .../013-libicu63_63.2-2_i386.deb ... Unpacking libicu63:i386 (63.2-2) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../014-libxml2_2.9.4+dfsg1-7ubuntu5_i386.deb ... Unpacking libxml2:i386 (2.9.4+dfsg1-7ubuntu5) ... Selecting previously unselected package ucf. Preparing to unpack .../015-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../016-gettext-base_0.19.8.1-9_i386.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../017-libkrb5support0_1.17-6_i386.deb ... Unpacking libkrb5support0:i386 (1.17-6) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../018-libk5crypto3_1.17-6_i386.deb ... Unpacking libk5crypto3:i386 (1.17-6) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../019-libkeyutils1_1.6-6ubuntu1_i386.deb ... Unpacking libkeyutils1:i386 (1.6-6ubuntu1) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../020-libkrb5-3_1.17-6_i386.deb ... Unpacking libkrb5-3:i386 (1.17-6) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../021-libgssapi-krb5-2_1.17-6_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.17-6) ... Selecting previously unselected package libpsl5:i386. Preparing to unpack .../022-libpsl5_0.20.2-2_i386.deb ... Unpacking libpsl5:i386 (0.20.2-2) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../023-libxau6_1%3a1.0.9-0ubuntu1_i386.deb ... Unpacking libxau6:i386 (1:1.0.9-0ubuntu1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../024-libxdmcp6_1%3a1.1.3-0ubuntu1_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.3-0ubuntu1) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../025-libxcb1_1.13.1-2_i386.deb ... Unpacking libxcb1:i386 (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../026-libx11-data_2%3a1.6.8-1_all.deb ... Unpacking libx11-data (2:1.6.8-1) ... Selecting previously unselected package libx11-6:i386. Preparing to unpack .../027-libx11-6_2%3a1.6.8-1_i386.deb ... Unpacking libx11-6:i386 (2:1.6.8-1) ... Selecting previously unselected package libxext6:i386. Preparing to unpack .../028-libxext6_2%3a1.3.4-0ubuntu1_i386.deb ... Unpacking libxext6:i386 (2:1.3.4-0ubuntu1) ... Selecting previously unselected package libxmuu1:i386. Preparing to unpack .../029-libxmuu1_2%3a1.1.3-0ubuntu1_i386.deb ... Unpacking libxmuu1:i386 (2:1.1.3-0ubuntu1) ... Selecting previously unselected package xauth. Preparing to unpack .../030-xauth_1%3a1.1-0ubuntu1_i386.deb ... Unpacking xauth (1:1.1-0ubuntu1) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../031-libsigsegv2_2.12-2_i386.deb ... Unpacking libsigsegv2:i386 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../032-m4_1.4.18-4_i386.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../033-autoconf_2.69-11ubuntu1_all.deb ... Unpacking autoconf (2.69-11ubuntu1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../034-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../035-automake_1%3a1.16.1-4ubuntu3_all.deb ... Unpacking automake (1:1.16.1-4ubuntu3) ... Selecting previously unselected package autopoint. Preparing to unpack .../036-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package dctrl-tools. Preparing to unpack .../037-dctrl-tools_2.24-3_i386.deb ... Unpacking dctrl-tools (2.24-3) ... Selecting previously unselected package libtool. Preparing to unpack .../038-libtool_2.4.6-11_all.deb ... Unpacking libtool (2.4.6-11) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../039-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../040-libdebhelper-perl_12.7.1ubuntu1_all.deb ... Unpacking libdebhelper-perl (12.7.1ubuntu1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../041-libarchive-zip-perl_1.67-1_all.deb ... Unpacking libarchive-zip-perl (1.67-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../042-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../043-libfile-stripnondeterminism-perl_1.6.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.6.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../044-dh-strip-nondeterminism_1.6.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.6.2-1) ... Selecting previously unselected package dwz. Preparing to unpack .../045-dwz_0.13-2_i386.deb ... Unpacking dwz (0.13-2) ... Selecting previously unselected package libcroco3:i386. Preparing to unpack .../046-libcroco3_0.6.13-1_i386.deb ... Unpacking libcroco3:i386 (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../047-gettext_0.19.8.1-9_i386.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../048-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../049-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../050-debhelper_12.7.1ubuntu1_all.deb ... Unpacking debhelper (12.7.1ubuntu1) ... Selecting previously unselected package zip. Preparing to unpack .../051-zip_3.0-11build1_i386.deb ... Unpacking zip (3.0-11build1) ... Selecting previously unselected package unzip. Preparing to unpack .../052-unzip_6.0-25ubuntu1_i386.deb ... Unpacking unzip (6.0-25ubuntu1) ... Selecting previously unselected package libpaper1:i386. Preparing to unpack .../053-libpaper1_1.1.28_i386.deb ... Unpacking libpaper1:i386 (1.1.28) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../054-libpaper-utils_1.1.28_i386.deb ... Unpacking libpaper-utils (1.1.28) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../055-xdg-utils_1.1.3-1ubuntu2_all.deb ... Unpacking xdg-utils (1.1.3-1ubuntu2) ... Selecting previously unselected package libblas3:i386. Preparing to unpack .../056-libblas3_3.8.0-8_i386.deb ... Unpacking libblas3:i386 (3.8.0-8) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../057-libfreetype6_2.10.1-2_i386.deb ... Unpacking libfreetype6:i386 (2.10.1-2) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../058-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../059-fontconfig-config_2.13.1-2ubuntu2_all.deb ... Unpacking fontconfig-config (2.13.1-2ubuntu2) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../060-libfontconfig1_2.13.1-2ubuntu2_i386.deb ... Unpacking libfontconfig1:i386 (2.13.1-2ubuntu2) ... Selecting previously unselected package libpixman-1-0:i386. Preparing to unpack .../061-libpixman-1-0_0.38.4-0ubuntu1_i386.deb ... Unpacking libpixman-1-0:i386 (0.38.4-0ubuntu1) ... Selecting previously unselected package libxcb-render0:i386. Preparing to unpack .../062-libxcb-render0_1.13.1-2_i386.deb ... Unpacking libxcb-render0:i386 (1.13.1-2) ... Selecting previously unselected package libxcb-shm0:i386. Preparing to unpack .../063-libxcb-shm0_1.13.1-2_i386.deb ... Unpacking libxcb-shm0:i386 (1.13.1-2) ... Selecting previously unselected package libxrender1:i386. Preparing to unpack .../064-libxrender1_1%3a0.9.10-1_i386.deb ... Unpacking libxrender1:i386 (1:0.9.10-1) ... Selecting previously unselected package libcairo2:i386. Preparing to unpack .../065-libcairo2_1.16.0-4_i386.deb ... Unpacking libcairo2:i386 (1.16.0-4) ... Selecting previously unselected package libroken18-heimdal:i386. Preparing to unpack .../066-libroken18-heimdal_7.5.0+dfsg-3build1_i386.deb ... Unpacking libroken18-heimdal:i386 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libasn1-8-heimdal:i386. Preparing to unpack .../067-libasn1-8-heimdal_7.5.0+dfsg-3build1_i386.deb ... Unpacking libasn1-8-heimdal:i386 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libheimbase1-heimdal:i386. Preparing to unpack .../068-libheimbase1-heimdal_7.5.0+dfsg-3build1_i386.deb ... Unpacking libheimbase1-heimdal:i386 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libhcrypto4-heimdal:i386. Preparing to unpack .../069-libhcrypto4-heimdal_7.5.0+dfsg-3build1_i386.deb ... Unpacking libhcrypto4-heimdal:i386 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libwind0-heimdal:i386. Preparing to unpack .../070-libwind0-heimdal_7.5.0+dfsg-3build1_i386.deb ... Unpacking libwind0-heimdal:i386 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libhx509-5-heimdal:i386. Preparing to unpack .../071-libhx509-5-heimdal_7.5.0+dfsg-3build1_i386.deb ... Unpacking libhx509-5-heimdal:i386 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libkrb5-26-heimdal:i386. Preparing to unpack .../072-libkrb5-26-heimdal_7.5.0+dfsg-3build1_i386.deb ... Unpacking libkrb5-26-heimdal:i386 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libheimntlm0-heimdal:i386. Preparing to unpack .../073-libheimntlm0-heimdal_7.5.0+dfsg-3build1_i386.deb ... Unpacking libheimntlm0-heimdal:i386 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libgssapi3-heimdal:i386. Preparing to unpack .../074-libgssapi3-heimdal_7.5.0+dfsg-3build1_i386.deb ... Unpacking libgssapi3-heimdal:i386 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../075-libsasl2-modules-db_2.1.27+dfsg-1build3_i386.deb ... Unpacking libsasl2-modules-db:i386 (2.1.27+dfsg-1build3) ... Selecting previously unselected package libsasl2-2:i386. Preparing to unpack .../076-libsasl2-2_2.1.27+dfsg-1build3_i386.deb ... Unpacking libsasl2-2:i386 (2.1.27+dfsg-1build3) ... Selecting previously unselected package libldap-common. Preparing to unpack .../077-libldap-common_2.4.48+dfsg-1ubuntu3_all.deb ... Unpacking libldap-common (2.4.48+dfsg-1ubuntu3) ... Selecting previously unselected package libldap-2.4-2:i386. Preparing to unpack .../078-libldap-2.4-2_2.4.48+dfsg-1ubuntu3_i386.deb ... Unpacking libldap-2.4-2:i386 (2.4.48+dfsg-1ubuntu3) ... Selecting previously unselected package libnghttp2-14:i386. Preparing to unpack .../079-libnghttp2-14_1.39.2-1_i386.deb ... Unpacking libnghttp2-14:i386 (1.39.2-1) ... Selecting previously unselected package librtmp1:i386. Preparing to unpack .../080-librtmp1_2.4+20151223.gitfa8646d.1-2build1_i386.deb ... Unpacking librtmp1:i386 (2.4+20151223.gitfa8646d.1-2build1) ... Selecting previously unselected package libssh-4:i386. Preparing to unpack .../081-libssh-4_0.9.0-1ubuntu1_i386.deb ... Unpacking libssh-4:i386 (0.9.0-1ubuntu1) ... Selecting previously unselected package libcurl4:i386. Preparing to unpack .../082-libcurl4_7.65.3-1ubuntu4_i386.deb ... Unpacking libcurl4:i386 (7.65.3-1ubuntu4) ... Selecting previously unselected package libjpeg-turbo8:i386. Preparing to unpack .../083-libjpeg-turbo8_2.0.3-0ubuntu1_i386.deb ... Unpacking libjpeg-turbo8:i386 (2.0.3-0ubuntu1) ... Selecting previously unselected package libjpeg8:i386. Preparing to unpack .../084-libjpeg8_8c-2ubuntu8_i386.deb ... Unpacking libjpeg8:i386 (8c-2ubuntu8) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../085-libgfortran5_9.2.1-19ubuntu1_i386.deb ... Unpacking libgfortran5:i386 (9.2.1-19ubuntu1) ... Selecting previously unselected package liblapack3:i386. Preparing to unpack .../086-liblapack3_3.8.0-8_i386.deb ... Unpacking liblapack3:i386 (3.8.0-8) ... Selecting previously unselected package fontconfig. Preparing to unpack .../087-fontconfig_2.13.1-2ubuntu2_i386.deb ... Unpacking fontconfig (2.13.1-2ubuntu2) ... Selecting previously unselected package libgraphite2-3:i386. Preparing to unpack .../088-libgraphite2-3_1.3.13-11_i386.deb ... Unpacking libgraphite2-3:i386 (1.3.13-11) ... Selecting previously unselected package libharfbuzz0b:i386. Preparing to unpack .../089-libharfbuzz0b_2.6.4-1_i386.deb ... Unpacking libharfbuzz0b:i386 (2.6.4-1) ... Selecting previously unselected package libthai-data. Preparing to unpack .../090-libthai-data_0.1.28-3_all.deb ... Unpacking libthai-data (0.1.28-3) ... Selecting previously unselected package libdatrie1:i386. Preparing to unpack .../091-libdatrie1_0.2.12-3_i386.deb ... Unpacking libdatrie1:i386 (0.2.12-3) ... Selecting previously unselected package libthai0:i386. Preparing to unpack .../092-libthai0_0.1.28-3_i386.deb ... Unpacking libthai0:i386 (0.1.28-3) ... Selecting previously unselected package libpango-1.0-0:i386. Preparing to unpack .../093-libpango-1.0-0_1.44.7-1_i386.deb ... Unpacking libpango-1.0-0:i386 (1.44.7-1) ... Selecting previously unselected package libpangoft2-1.0-0:i386. Preparing to unpack .../094-libpangoft2-1.0-0_1.44.7-1_i386.deb ... Unpacking libpangoft2-1.0-0:i386 (1.44.7-1) ... Selecting previously unselected package libpangocairo-1.0-0:i386. Preparing to unpack .../095-libpangocairo-1.0-0_1.44.7-1_i386.deb ... Unpacking libpangocairo-1.0-0:i386 (1.44.7-1) ... Selecting previously unselected package libtcl8.6:i386. Preparing to unpack .../096-libtcl8.6_8.6.9+dfsg-2_i386.deb ... Unpacking libtcl8.6:i386 (8.6.9+dfsg-2) ... Selecting previously unselected package libjbig0:i386. Preparing to unpack .../097-libjbig0_2.1-3.1build1_i386.deb ... Unpacking libjbig0:i386 (2.1-3.1build1) ... Selecting previously unselected package libwebp6:i386. Preparing to unpack .../098-libwebp6_0.6.1-2_i386.deb ... Unpacking libwebp6:i386 (0.6.1-2) ... Selecting previously unselected package libtiff5:i386. Preparing to unpack .../099-libtiff5_4.1.0-1_i386.deb ... Unpacking libtiff5:i386 (4.1.0-1) ... Selecting previously unselected package libxft2:i386. Preparing to unpack .../100-libxft2_2.3.3-0ubuntu1_i386.deb ... Unpacking libxft2:i386 (2.3.3-0ubuntu1) ... Selecting previously unselected package x11-common. Preparing to unpack .../101-x11-common_1%3a7.7+19ubuntu12_all.deb ... dpkg-query: no packages found matching nux-tools Unpacking x11-common (1:7.7+19ubuntu12) ... Selecting previously unselected package libxss1:i386. Preparing to unpack .../102-libxss1_1%3a1.2.3-1_i386.deb ... Unpacking libxss1:i386 (1:1.2.3-1) ... Selecting previously unselected package libtk8.6:i386. Preparing to unpack .../103-libtk8.6_8.6.9-2_i386.deb ... Unpacking libtk8.6:i386 (8.6.9-2) ... Selecting previously unselected package libice6:i386. Preparing to unpack .../104-libice6_2%3a1.0.10-0ubuntu1_i386.deb ... Unpacking libice6:i386 (2:1.0.10-0ubuntu1) ... Selecting previously unselected package libsm6:i386. Preparing to unpack .../105-libsm6_2%3a1.2.3-1_i386.deb ... Unpacking libsm6:i386 (2:1.2.3-1) ... Selecting previously unselected package libxt6:i386. Preparing to unpack .../106-libxt6_1%3a1.1.5-1_i386.deb ... Unpacking libxt6:i386 (1:1.1.5-1) ... Selecting previously unselected package r-base-core. Preparing to unpack .../107-r-base-core_3.6.1-7_i386.deb ... Unpacking r-base-core (3.6.1-7) ... Selecting previously unselected package libgfortran-9-dev:i386. Preparing to unpack .../108-libgfortran-9-dev_9.2.1-19ubuntu1_i386.deb ... Unpacking libgfortran-9-dev:i386 (9.2.1-19ubuntu1) ... Selecting previously unselected package gfortran-9. Preparing to unpack .../109-gfortran-9_9.2.1-19ubuntu1_i386.deb ... Unpacking gfortran-9 (9.2.1-19ubuntu1) ... Selecting previously unselected package gfortran. Preparing to unpack .../110-gfortran_4%3a9.2.1-3.1ubuntu1_i386.deb ... Unpacking gfortran (4:9.2.1-3.1ubuntu1) ... Selecting previously unselected package libblas-dev:i386. Preparing to unpack .../111-libblas-dev_3.8.0-8_i386.deb ... Unpacking libblas-dev:i386 (3.8.0-8) ... Selecting previously unselected package liblapack-dev:i386. Preparing to unpack .../112-liblapack-dev_3.8.0-8_i386.deb ... Unpacking liblapack-dev:i386 (3.8.0-8) ... Selecting previously unselected package libncurses-dev:i386. Preparing to unpack .../113-libncurses-dev_6.1+20191019-1ubuntu1_i386.deb ... Unpacking libncurses-dev:i386 (6.1+20191019-1ubuntu1) ... Selecting previously unselected package libncurses5-dev:i386. Preparing to unpack .../114-libncurses5-dev_6.1+20191019-1ubuntu1_i386.deb ... Unpacking libncurses5-dev:i386 (6.1+20191019-1ubuntu1) ... Selecting previously unselected package libreadline-dev:i386. Preparing to unpack .../115-libreadline-dev_8.0-3_i386.deb ... Unpacking libreadline-dev:i386 (8.0-3) ... Selecting previously unselected package libjpeg-turbo8-dev:i386. Preparing to unpack .../116-libjpeg-turbo8-dev_2.0.3-0ubuntu1_i386.deb ... Unpacking libjpeg-turbo8-dev:i386 (2.0.3-0ubuntu1) ... Selecting previously unselected package libjpeg8-dev:i386. Preparing to unpack .../117-libjpeg8-dev_8c-2ubuntu8_i386.deb ... Unpacking libjpeg8-dev:i386 (8c-2ubuntu8) ... Selecting previously unselected package libjpeg-dev:i386. Preparing to unpack .../118-libjpeg-dev_8c-2ubuntu8_i386.deb ... Unpacking libjpeg-dev:i386 (8c-2ubuntu8) ... Selecting previously unselected package libpcre2-16-0:i386. Preparing to unpack .../119-libpcre2-16-0_10.32-5_i386.deb ... Unpacking libpcre2-16-0:i386 (10.32-5) ... Selecting previously unselected package libpcre2-32-0:i386. Preparing to unpack .../120-libpcre2-32-0_10.32-5_i386.deb ... Unpacking libpcre2-32-0:i386 (10.32-5) ... Selecting previously unselected package libpcre2-posix0:i386. Preparing to unpack .../121-libpcre2-posix0_10.32-5_i386.deb ... Unpacking libpcre2-posix0:i386 (10.32-5) ... Selecting previously unselected package libpcre2-dev:i386. Preparing to unpack .../122-libpcre2-dev_10.32-5_i386.deb ... Unpacking libpcre2-dev:i386 (10.32-5) ... Selecting previously unselected package libpcre16-3:i386. Preparing to unpack .../123-libpcre16-3_2%3a8.39-12_i386.deb ... Unpacking libpcre16-3:i386 (2:8.39-12) ... Selecting previously unselected package libpcre32-3:i386. Preparing to unpack .../124-libpcre32-3_2%3a8.39-12_i386.deb ... Unpacking libpcre32-3:i386 (2:8.39-12) ... Selecting previously unselected package libpcrecpp0v5:i386. Preparing to unpack .../125-libpcrecpp0v5_2%3a8.39-12_i386.deb ... Unpacking libpcrecpp0v5:i386 (2:8.39-12) ... Selecting previously unselected package libpcre3-dev:i386. Preparing to unpack .../126-libpcre3-dev_2%3a8.39-12_i386.deb ... Unpacking libpcre3-dev:i386 (2:8.39-12) ... Selecting previously unselected package zlib1g-dev:i386. Preparing to unpack .../127-zlib1g-dev_1%3a1.2.11.dfsg-1ubuntu3_i386.deb ... Unpacking zlib1g-dev:i386 (1:1.2.11.dfsg-1ubuntu3) ... Selecting previously unselected package libpng-dev:i386. Preparing to unpack .../128-libpng-dev_1.6.37-1_i386.deb ... Unpacking libpng-dev:i386 (1.6.37-1) ... Selecting previously unselected package libbz2-dev:i386. Preparing to unpack .../129-libbz2-dev_1.0.8-2_i386.deb ... Unpacking libbz2-dev:i386 (1.0.8-2) ... Selecting previously unselected package liblzma-dev:i386. Preparing to unpack .../130-liblzma-dev_5.2.4-1_i386.deb ... Unpacking liblzma-dev:i386 (5.2.4-1) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../131-icu-devtools_63.2-2_i386.deb ... Unpacking icu-devtools (63.2-2) ... Selecting previously unselected package libicu-dev:i386. Preparing to unpack .../132-libicu-dev_63.2-2_i386.deb ... Unpacking libicu-dev:i386 (63.2-2) ... Selecting previously unselected package pkg-config. Preparing to unpack .../133-pkg-config_0.29.1-0ubuntu3_i386.deb ... Unpacking pkg-config (0.29.1-0ubuntu3) ... Selecting previously unselected package r-base-dev. Preparing to unpack .../134-r-base-dev_3.6.1-7_all.deb ... Unpacking r-base-dev (3.6.1-7) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../135-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libswitch-perl. Preparing to unpack .../136-libswitch-perl_2.17-2_all.deb ... Unpacking libswitch-perl (2.17-2) ... Selecting previously unselected package dh-r. Preparing to unpack .../137-dh-r_20190917_all.deb ... Unpacking dh-r (20190917) ... Selecting previously unselected package r-bioc-biocgenerics. Preparing to unpack .../138-r-bioc-biocgenerics_0.32.0-1_all.deb ... Unpacking r-bioc-biocgenerics (0.32.0-1) ... Selecting previously unselected package r-cran-formatr. Preparing to unpack .../139-r-cran-formatr_1.7-1_all.deb ... Unpacking r-cran-formatr (1.7-1) ... Selecting previously unselected package r-cran-lambda.r. Preparing to unpack .../140-r-cran-lambda.r_1.2.4-1_all.deb ... Unpacking r-cran-lambda.r (1.2.4-1) ... Selecting previously unselected package r-cran-futile.options. Preparing to unpack .../141-r-cran-futile.options_1.0.1-2_all.deb ... Unpacking r-cran-futile.options (1.0.1-2) ... Selecting previously unselected package r-cran-futile.logger. Preparing to unpack .../142-r-cran-futile.logger_1.4.3-3_all.deb ... Unpacking r-cran-futile.logger (1.4.3-3) ... Selecting previously unselected package r-cran-snow. Preparing to unpack .../143-r-cran-snow_1%3a0.4.3-1_all.deb ... Unpacking r-cran-snow (1:0.4.3-1) ... Selecting previously unselected package r-bioc-biocparallel. Preparing to unpack .../144-r-bioc-biocparallel_1.20.0-1_i386.deb ... Unpacking r-bioc-biocparallel (1.20.0-1) ... Selecting previously unselected package r-bioc-s4vectors. Preparing to unpack .../145-r-bioc-s4vectors_0.24.0-1_i386.deb ... Unpacking r-bioc-s4vectors (0.24.0-1) ... Selecting previously unselected package r-bioc-iranges. Preparing to unpack .../146-r-bioc-iranges_2.20.0-1_i386.deb ... Unpacking r-bioc-iranges (2.20.0-1) ... Selecting previously unselected package r-cran-lattice. Preparing to unpack .../147-r-cran-lattice_0.20-38-1_i386.deb ... Unpacking r-cran-lattice (0.20-38-1) ... Selecting previously unselected package r-cran-matrix. Preparing to unpack .../148-r-cran-matrix_1.2-17-2_i386.deb ... Unpacking r-cran-matrix (1.2-17-2) ... Selecting previously unselected package r-cran-matrixstats. Preparing to unpack .../149-r-cran-matrixstats_0.55.0-1_i386.deb ... Unpacking r-cran-matrixstats (0.55.0-1) ... Selecting previously unselected package sbuild-build-depends-r-bioc-delayedarray-dummy. Preparing to unpack .../150-sbuild-build-depends-r-bioc-delayedarray-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-r-bioc-delayedarray-dummy (0.invalid.0) ... Setting up libexpat1:i386 (2.2.9-1) ... Setting up libpcrecpp0v5:i386 (2:8.39-12) ... Setting up libpipeline1:i386 (1.5.1-2) ... Setting up libgraphite2-3:i386 (1.3.13-11) ... Setting up libpixman-1-0:i386 (0.38.4-0ubuntu1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libxau6:i386 (1:1.0.9-0ubuntu1) ... Setting up libkeyutils1:i386 (1.6-6ubuntu1) ... Setting up libncurses-dev:i386 (6.1+20191019-1ubuntu1) ... Setting up libpsl5:i386 (0.20.2-2) ... Setting up libpcre16-3:i386 (2:8.39-12) ... Setting up libdatrie1:i386 (0.2.12-3) ... Setting up libmagic-mgc (1:5.37-6) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:i386 (2.63.1-1) ... No schema files found: doing nothing. Setting up unzip (6.0-25ubuntu1) ... Setting up libdebhelper-perl (12.7.1ubuntu1) ... Setting up x11-common (1:7.7+19ubuntu12) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libnghttp2-14:i386 (1.39.2-1) ... Setting up libmagic1:i386 (1:5.37-6) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.37-6) ... Setting up libreadline-dev:i386 (8.0-3) ... Setting up libldap-common (2.4.48+dfsg-1ubuntu3) ... Setting up libjbig0:i386 (2.1-3.1build1) ... Setting up libpcre2-16-0:i386 (10.32-5) ... Setting up libicu63:i386 (63.2-2) ... Setting up libkrb5support0:i386 (1.17-6) ... Setting up libsasl2-modules-db:i386 (2.1.27+dfsg-1build3) ... Setting up zip (3.0-11build1) ... Setting up autotools-dev (20180224.1) ... Setting up libpcre2-32-0:i386 (10.32-5) ... Setting up libblas3:i386 (3.8.0-8) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libpcre2-posix0:i386 (10.32-5) ... Setting up libswitch-perl (2.17-2) ... Setting up libfreetype6:i386 (2.10.1-2) ... Setting up libx11-data (2:1.6.8-1) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2build1) ... Setting up libsigsegv2:i386 (2.12-2) ... Setting up libfribidi0:i386 (1.0.7-1) ... Setting up libpcre32-3:i386 (2:8.39-12) ... Setting up libtcl8.6:i386 (8.6.9+dfsg-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libwebp6:i386 (0.6.1-2) ... Setting up icu-devtools (63.2-2) ... Setting up pkg-config (0.29.1-0ubuntu3) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up ucf (3.0038+nmu1) ... Setting up libk5crypto3:i386 (1.17-6) ... Setting up libjpeg-turbo8:i386 (2.0.3-0ubuntu1) ... Setting up libsasl2-2:i386 (2.1.27+dfsg-1build3) ... Setting up libgfortran5:i386 (9.2.1-19ubuntu1) ... Setting up libroken18-heimdal:i386 (7.5.0+dfsg-3build1) ... Setting up liblzma-dev:i386 (5.2.4-1) ... Setting up zlib1g-dev:i386 (1:1.2.11.dfsg-1ubuntu3) ... Setting up libuchardet0:i386 (0.0.6-3) ... Setting up libncurses5-dev:i386 (6.1+20191019-1ubuntu1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libharfbuzz0b:i386 (2.6.4-1) ... Setting up libthai-data (0.1.28-3) ... Setting up libkrb5-3:i386 (1.17-6) ... Setting up libbsd0:i386 (0.10.0-1) ... Setting up libelf1:i386 (0.176-1.1) ... Setting up libicu-dev:i386 (63.2-2) ... Setting up libxml2:i386 (2.9.4+dfsg1-7ubuntu5) ... Setting up xdg-utils (1.1.3-1ubuntu2) ... Setting up libblas-dev:i386 (3.8.0-8) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up dctrl-tools (2.24-3) ... Setting up libheimbase1-heimdal:i386 (7.5.0+dfsg-3build1) ... Setting up libbz2-dev:i386 (1.0.8-2) ... Setting up libjpeg8:i386 (8c-2ubuntu8) ... Setting up libfile-stripnondeterminism-perl (1.6.2-1) ... Setting up libpaper1:i386 (1.1.28) ... Creating config file /etc/papersize with new version Setting up libice6:i386 (2:1.0.10-0ubuntu1) ... Setting up libjpeg-turbo8-dev:i386 (2.0.3-0ubuntu1) ... Setting up libxdmcp6:i386 (1:1.1.3-0ubuntu1) ... Setting up liblapack3:i386 (3.8.0-8) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up libxcb1:i386 (1.13.1-2) ... Setting up libpcre2-dev:i386 (10.32-5) ... Setting up libtool (2.4.6-11) ... Setting up libxcb-render0:i386 (1.13.1-2) ... Setting up libpcre3-dev:i386 (2:8.39-12) ... Setting up fontconfig-config (2.13.1-2ubuntu2) ... Setting up libasn1-8-heimdal:i386 (7.5.0+dfsg-3build1) ... Setting up libpng-dev:i386 (1.6.37-1) ... Setting up libgfortran-9-dev:i386 (9.2.1-19ubuntu1) ... Setting up m4 (1.4.18-4) ... Setting up libxcb-shm0:i386 (1.13.1-2) ... Setting up libpaper-utils (1.1.28) ... Setting up libhcrypto4-heimdal:i386 (7.5.0+dfsg-3build1) ... Setting up libthai0:i386 (0.1.28-3) ... Setting up libwind0-heimdal:i386 (7.5.0+dfsg-3build1) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up liblapack-dev:i386 (3.8.0-8) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up libgssapi-krb5-2:i386 (1.17-6) ... Setting up libcroco3:i386 (0.6.13-1) ... Setting up libssh-4:i386 (0.9.0-1ubuntu1) ... Setting up autoconf (2.69-11ubuntu1) ... Setting up dh-strip-nondeterminism (1.6.2-1) ... Setting up dwz (0.13-2) ... Setting up groff-base (1.22.4-3) ... Setting up libx11-6:i386 (2:1.6.8-1) ... Setting up libtiff5:i386 (4.1.0-1) ... Setting up libfontconfig1:i386 (2.13.1-2ubuntu2) ... Setting up libjpeg8-dev:i386 (8c-2ubuntu8) ... Setting up libsm6:i386 (2:1.2.3-1) ... Setting up libxmuu1:i386 (2:1.1.3-0ubuntu1) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up fontconfig (2.13.1-2ubuntu2) ... Regenerating fonts cache... done. Setting up gettext (0.19.8.1-9) ... Setting up libxrender1:i386 (1:0.9.10-1) ... Setting up gfortran-9 (9.2.1-19ubuntu1) ... Setting up libhx509-5-heimdal:i386 (7.5.0+dfsg-3build1) ... Setting up libpango-1.0-0:i386 (1.44.7-1) ... Setting up libjpeg-dev:i386 (8c-2ubuntu8) ... Setting up libxext6:i386 (2:1.3.4-0ubuntu1) ... Setting up man-db (2.9.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up gfortran (4:9.2.1-3.1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:i386 (1.16.0-4) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxt6:i386 (1:1.1.5-1) ... Setting up xauth (1:1.1-0ubuntu1) ... Setting up libxss1:i386 (1:1.2.3-1) ... Setting up libpangoft2-1.0-0:i386 (1.44.7-1) ... Setting up libpangocairo-1.0-0:i386 (1.44.7-1) ... Setting up libkrb5-26-heimdal:i386 (7.5.0+dfsg-3build1) ... Setting up libxft2:i386 (2.3.3-0ubuntu1) ... Setting up po-debconf (1.0.21) ... Setting up libtk8.6:i386 (8.6.9-2) ... Setting up libheimntlm0-heimdal:i386 (7.5.0+dfsg-3build1) ... Setting up libgssapi3-heimdal:i386 (7.5.0+dfsg-3build1) ... Setting up libldap-2.4-2:i386 (2.4.48+dfsg-1ubuntu3) ... Setting up libcurl4:i386 (7.65.3-1ubuntu4) ... Setting up r-base-core (3.6.1-7) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-futile.options (1.0.1-2) ... Setting up r-cran-lattice (0.20-38-1) ... Setting up r-cran-formatr (1.7-1) ... Setting up r-bioc-biocgenerics (0.32.0-1) ... Setting up r-cran-matrixstats (0.55.0-1) ... Setting up r-base-dev (3.6.1-7) ... Setting up r-cran-lambda.r (1.2.4-1) ... Setting up r-cran-snow (1:0.4.3-1) ... Setting up r-bioc-s4vectors (0.24.0-1) ... Setting up r-cran-futile.logger (1.4.3-3) ... Setting up r-cran-matrix (1.2-17-2) ... Setting up r-bioc-iranges (2.20.0-1) ... Setting up r-bioc-biocparallel (1.20.0-1) ... Setting up debhelper (12.7.1ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up dh-r (20190917) ... Setting up sbuild-build-depends-r-bioc-delayedarray-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.30-0ubuntu2) ... Processing triggers for systemd (243-3ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-166-generic amd64 (i686) Toolchain package versions: binutils_2.33.1-1ubuntu1 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-19ubuntu1 gcc-9_9.2.1-19ubuntu1 libc6-dev_2.30-0ubuntu2 libstdc++-9-dev_9.2.1-19ubuntu1 libstdc++6_9.2.1-19ubuntu1 linux-libc-dev_5.3.0-21.22 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.4 autoconf_2.69-11ubuntu1 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11ubuntu1 base-passwd_3.5.46 bash_5.0-4ubuntu1 binutils_2.33.1-1ubuntu1 binutils-common_2.33.1-1ubuntu1 binutils-i686-linux-gnu_2.33.1-1ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu2 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3ubuntu2 cpp_4:9.2.1-3.1ubuntu1 cpp-9_9.2.1-19ubuntu1 dash_0.5.10.2-6 dctrl-tools_2.24-3 debconf_1.5.73 debhelper_12.7.1ubuntu1 debianutils_4.9 dh-autoreconf_19 dh-r_20190917 dh-strip-nondeterminism_1.6.2-1 diffutils_1:3.7-3 dpkg_1.19.7ubuntu2 dpkg-dev_1.19.7ubuntu2 dwz_0.13-2 e2fsprogs_1.45.3-4ubuntu2 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu2 file_1:5.37-6 findutils_4.6.0+git+20190209-2ubuntu1 fontconfig_2.13.1-2ubuntu2 fontconfig-config_2.13.1-2ubuntu2 fonts-dejavu-core_2.37-1 g++_4:9.2.1-3.1ubuntu1 g++-9_9.2.1-19ubuntu1 gcc_4:9.2.1-3.1ubuntu1 gcc-9_9.2.1-19ubuntu1 gcc-9-base_9.2.1-19ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gfortran_4:9.2.1-3.1ubuntu1 gfortran-9_9.2.1-19ubuntu1 gpg_2.2.12-1ubuntu3 gpg-agent_2.2.12-1ubuntu3 gpgconf_2.2.12-1ubuntu3 gpgv_2.2.12-1ubuntu3 grep_3.3-1build1 groff-base_1.22.4-3 gzip_1.10-0ubuntu3 hostname_3.23 icu-devtools_63.2-2 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libapparmor1_2.13.3-5ubuntu5 libapt-pkg5.90_1.9.4 libarchive-zip-perl_1.67-1 libargon2-1_0~20171227-0.2 libasan5_9.2.1-19ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-3build1 libassuan0_2.5.3-7ubuntu1 libatomic1_9.2.1-19ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu2 libaudit1_1:2.8.5-2ubuntu2 libbinutils_2.33.1-1ubuntu1 libblas-dev_3.8.0-8 libblas3_3.8.0-8 libblkid1_2.34-0.1ubuntu2 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libbz2-dev_1.0.8-2 libc-bin_2.30-0ubuntu2 libc-dev-bin_2.30-0ubuntu2 libc6_2.30-0ubuntu2 libc6-dev_2.30-0ubuntu2 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.1 libcap2_1:2.27-1 libcc1-0_9.2.1-19ubuntu1 libcom-err2_1.45.3-4ubuntu2 libcroco3_0.6.13-1 libcryptsetup12_2:2.2.1-1ubuntu1 libcurl4_7.65.3-1ubuntu4 libdatrie1_0.2.12-3 libdb5.3_5.3.28+dfsg1-0.6ubuntu1 libdebconfclient0_0.250ubuntu1 libdebhelper-perl_12.7.1ubuntu1 libdevmapper1.02.1_2:1.02.155-2ubuntu6 libdpkg-perl_1.19.7ubuntu2 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.3-4ubuntu2 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu2 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.6.2-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-2ubuntu2 libfreetype6_2.10.1-2 libfribidi0_1.0.7-1 libgcc-9-dev_9.2.1-19ubuntu1 libgcc1_1:9.2.1-19ubuntu1 libgcrypt20_1.8.5-3ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-9-dev_9.2.1-19ubuntu1 libgfortran5_9.2.1-19ubuntu1 libglib2.0-0_2.63.1-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.9-5ubuntu2 libgomp1_9.2.1-19ubuntu1 libgpg-error0_1.36-7 libgraphite2-3_1.3.13-11 libgssapi-krb5-2_1.17-6 libgssapi3-heimdal_7.5.0+dfsg-3build1 libharfbuzz0b_2.6.4-1 libhcrypto4-heimdal_7.5.0+dfsg-3build1 libheimbase1-heimdal_7.5.0+dfsg-3build1 libheimntlm0-heimdal_7.5.0+dfsg-3build1 libhogweed4_3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhx509-5-heimdal_7.5.0+dfsg-3build1 libice6_2:1.0.10-0ubuntu1 libicu-dev_63.2-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libip4tc2_1.8.3-2ubuntu5 libisl21_0.21-2 libitm1_9.2.1-19ubuntu1 libjbig0_2.1-3.1build1 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_2.0.3-0ubuntu1 libjpeg-turbo8-dev_2.0.3-0ubuntu1 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libjson-c4_0.13.1+dfsg-6 libk5crypto3_1.17-6 libkeyutils1_1.6-6ubuntu1 libkmod2_26-3ubuntu1 libkrb5-26-heimdal_7.5.0+dfsg-3build1 libkrb5-3_1.17-6 libkrb5support0_1.17-6 liblapack-dev_3.8.0-8 liblapack3_3.8.0-8 libldap-2.4-2_2.4.48+dfsg-1ubuntu3 libldap-common_2.4.48+dfsg-1ubuntu3 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblz4-1_1.9.2-1 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1ubuntu2 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses-dev_6.1+20191019-1ubuntu1 libncurses5-dev_6.1+20191019-1ubuntu1 libncurses6_6.1+20191019-1ubuntu1 libncursesw6_6.1+20191019-1ubuntu1 libnettle6_3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.39.2-1 libnpth0_1.6-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5ubuntu1 libpam-modules-bin_1.3.1-5ubuntu1 libpam-runtime_1.3.1-5ubuntu1 libpam0g_1.3.1-5ubuntu1 libpango-1.0-0_1.44.7-1 libpangocairo-1.0-0_1.44.7-1 libpangoft2-1.0-0_1.44.7-1 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre16-3_2:8.39-12 libpcre2-16-0_10.32-5 libpcre2-32-0_10.32-5 libpcre2-8-0_10.32-5 libpcre2-dev_10.32-5 libpcre2-posix0_10.32-5 libpcre3_2:8.39-12 libpcre3-dev_2:8.39-12 libpcre32-3_2:8.39-12 libpcrecpp0v5_2:8.39-12 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-9 libpipeline1_1.5.1-2 libpixman-1-0_0.38.4-0ubuntu1 libpng-dev_1.6.37-1 libpng16-16_1.6.37-1 libprocps7_2:3.3.15-2ubuntu3 libpsl5_0.20.2-2 libquadmath0_9.2.1-19ubuntu1 libreadline-dev_8.0-3 libreadline8_8.0-3 libroken18-heimdal_7.5.0+dfsg-3build1 librtmp1_2.4+20151223.gitfa8646d.1-2build1 libsasl2-2_2.1.27+dfsg-1build3 libsasl2-modules-db_2.1.27+dfsg-1build3 libseccomp2_2.4.1-0ubuntu0.19.10.3 libselinux1_2.9-2build1 libsemanage-common_2.9-3build1 libsemanage1_2.9-3build1 libsepol1_2.9-2 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1ubuntu2 libsqlite3-0_3.30.1-1 libss2_1.45.3-4ubuntu2 libssh-4_0.9.0-1ubuntu1 libssl1.1_1.1.1c-1ubuntu4 libstdc++-9-dev_9.2.1-19ubuntu1 libstdc++6_9.2.1-19ubuntu1 libsub-override-perl_0.09-2 libswitch-perl_2.17-2 libsystemd0_243-3ubuntu1 libtasn1-6_4.14-3 libtcl8.6_8.6.9+dfsg-2 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0-1 libtinfo6_6.1+20191019-1ubuntu1 libtk8.6_8.6.9-2 libtool_2.4.6-11 libubsan1_9.2.1-19ubuntu1 libuchardet0_0.0.6-3 libudev1_243-3ubuntu1 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu2 libwebp6_0.6.1-2 libwind0-heimdal_7.5.0+dfsg-3build1 libx11-6_2:1.6.8-1 libx11-data_2:1.6.8-1 libxau6_1:1.0.9-0ubuntu1 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.3-0ubuntu1 libxext6_2:1.3.4-0ubuntu1 libxft2_2.3.3-0ubuntu1 libxml2_2.9.4+dfsg1-7ubuntu5 libxmuu1_2:1.1.3-0ubuntu1 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.1.5-1 libzstd1_1.4.3+dfsg-1 linux-libc-dev_5.3.0-21.22 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu4 logsave_1.45.3-4ubuntu2 lsb-base_11.1.0ubuntu1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-1 mawk_1.3.3-17ubuntu3 mount_2.34-0.1ubuntu2 ncurses-base_6.1+20191019-1ubuntu1 ncurses-bin_6.1+20191019-1ubuntu1 openssl_1.1.1c-1ubuntu4 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu4 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkg-config_0.29.1-0ubuntu3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu3 r-base-core_3.6.1-7 r-base-dev_3.6.1-7 r-bioc-biocgenerics_0.32.0-1 r-bioc-biocparallel_1.20.0-1 r-bioc-iranges_2.20.0-1 r-bioc-s4vectors_0.24.0-1 r-cran-formatr_1.7-1 r-cran-futile.logger_1.4.3-3 r-cran-futile.options_1.0.1-2 r-cran-lambda.r_1.2.4-1 r-cran-lattice_0.20-38-1 r-cran-matrix_1.2-17-2 r-cran-matrixstats_0.55.0-1 r-cran-snow_1:0.4.3-1 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-delayedarray-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_243-3ubuntu1 systemd-sysv_243-3ubuntu1 sysvinit-utils_2.96-1ubuntu1 tar_1.30+dfsg-6 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 unzip_6.0-25ubuntu1 util-linux_2.34-0.1ubuntu2 x11-common_1:7.7+19ubuntu12 xauth_1:1.1-0ubuntu1 xdg-utils_1.1.3-1ubuntu2 xz-utils_5.2.4-1 zip_3.0-11build1 zlib1g_1:1.2.11.dfsg-1ubuntu3 zlib1g-dev_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sat Nov 9 21:46:36 2019 UTC gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54 gpgv: issuer "daissi@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./r-bioc-delayedarray_0.12.0+dfsg-1.dsc dpkg-source: info: extracting r-bioc-delayedarray in r-bioc-delayedarray-0.12.0+dfsg dpkg-source: info: unpacking r-bioc-delayedarray_0.12.0+dfsg.orig.tar.xz dpkg-source: info: unpacking r-bioc-delayedarray_0.12.0+dfsg-1.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18079693 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18079693 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-18079693 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package r-bioc-delayedarray dpkg-buildpackage: info: source version 0.12.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules build-arch dh build-arch --buildsystem R dh_update_autotools_config -a -O--buildsystem=R dh_autoreconf -a -O--buildsystem=R dh_auto_configure -a -O--buildsystem=R dh_auto_build -a -O--buildsystem=R dh_auto_test -a -O--buildsystem=R create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --buildsystem R dh_testroot -a -O--buildsystem=R dh_prep -a -O--buildsystem=R dh_auto_install -a -O--buildsystem=R I: R packages needed for DEP8: runit, biocgenerics, genefilter I: R Package: DelayedArray Version: 0.12.0 I: Building using R version 3.6.1-7 I: R API version: r-api-3.5 I: Using built-time from d/changelog: Sat, 09 Nov 2019 22:39:39 +0100 mkdir -p /<>/r-bioc-delayedarray-0.12.0\+dfsg/debian/r-bioc-delayedarray/usr/lib/R/site-library R CMD INSTALL -l /<>/r-bioc-delayedarray-0.12.0\+dfsg/debian/r-bioc-delayedarray/usr/lib/R/site-library --clean . "--built-timestamp='Sat, 09 Nov 2019 22:39:39 +0100'" * installing *source* package ‘DelayedArray’ ... ** using staged installation ** libs make[1]: Entering directory '/<>/r-bioc-delayedarray-0.12.0+dfsg/src' gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/S4Vectors/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-0pS_1n/r-base-3.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c R_init_DelayedArray.c -o R_init_DelayedArray.o gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/S4Vectors/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-0pS_1n/r-base-3.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c S4Vectors_stubs.c -o S4Vectors_stubs.o gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/S4Vectors/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-0pS_1n/r-base-3.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c abind.c -o abind.o gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/S4Vectors/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-0pS_1n/r-base-3.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c compress_atomic_vector.c -o compress_atomic_vector.o gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o DelayedArray.so R_init_DelayedArray.o S4Vectors_stubs.o abind.o compress_atomic_vector.o -L/usr/lib/R/lib -lR make[1]: Leaving directory '/<>/r-bioc-delayedarray-0.12.0+dfsg/src' make[1]: Entering directory '/<>/r-bioc-delayedarray-0.12.0+dfsg/src' make[1]: Leaving directory '/<>/r-bioc-delayedarray-0.12.0+dfsg/src' installing to /<>/r-bioc-delayedarray-0.12.0+dfsg/debian/r-bioc-delayedarray/usr/lib/R/site-library/00LOCK-r-bioc-delayedarray-0.12.0+dfsg/00new/DelayedArray/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘aperm’ in package ‘DelayedArray’ Creating a generic function for ‘sweep’ from package ‘base’ in package ‘DelayedArray’ Creating a new generic function for ‘apply’ in package ‘DelayedArray’ Creating a new generic function for ‘rowsum’ in package ‘DelayedArray’ Creating a generic function for ‘dnorm’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘pnorm’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qnorm’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘dbinom’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘pbinom’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qbinom’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘dpois’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘ppois’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qpois’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘dlogis’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘plogis’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qlogis’ from package ‘stats’ in package ‘DelayedArray’ Creating a new generic function for ‘rowMaxs’ in package ‘DelayedArray’ Creating a new generic function for ‘colMaxs’ in package ‘DelayedArray’ Creating a new generic function for ‘rowMins’ in package ‘DelayedArray’ Creating a new generic function for ‘colMins’ in package ‘DelayedArray’ Creating a new generic function for ‘rowRanges’ in package ‘DelayedArray’ Creating a new generic function for ‘colRanges’ in package ‘DelayedArray’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DelayedArray) W: Ignoring specified R dependency: R (>= 3.4) I: Using r-cran-matrixstats for Depends:matrixStats I: Using r-bioc-biocgenerics for Depends:BiocGenerics (>= 0.31.5) I: Using r-bioc-s4vectors for Depends:S4Vectors (>= 0.21.7) I: Using r-bioc-iranges for Depends:IRanges (>= 2.17.3) I: Using r-bioc-biocparallel for Depends:BiocParallel I: Using r-cran-runit for Recommends:runit I: Using r-bioc-biocgenerics for Recommends:biocgenerics I: Using r-bioc-genefilter for Recommends:genefilter W: Cannot find a debian package for Suggests:HDF5Array I: Using r-bioc-summarizedexperiment for Suggests:SummarizedExperiment W: Cannot find a debian package for Suggests:airway W: Cannot find a debian package for Suggests:pryr W: Cannot find a debian package for Suggests:DelayedMatrixStats I: Using r-cran-knitr for Suggests:knitr W: Cannot find a debian package for Suggests:BiocStyle I: Using r-cran-matrix for Imports:Matrix I: BioConductor API version: r-api-bioc-3.10 dh_installdocs -a -O--buildsystem=R dh_installchangelogs -a -O--buildsystem=R dh_installinit -a -O--buildsystem=R dh_installsystemduser -a -O--buildsystem=R dh_perl -a -O--buildsystem=R dh_link -a -O--buildsystem=R dh_strip_nondeterminism -a -O--buildsystem=R dh_compress -a -O--buildsystem=R dh_fixperms -a -O--buildsystem=R dh_missing -a -O--buildsystem=R dh_dwz -a -O--buildsystem=R dh_strip -a -O--buildsystem=R dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -a -O--buildsystem=R dh_gencontrol -a -O--buildsystem=R dh_md5sums -a -O--buildsystem=R dh_builddeb -a -O--buildsystem=R INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing r-bioc-delayedarray (in debian/r-bioc-delayedarray); do_strip: , oemstrip: pkgstriptranslations: processing r-bioc-delayedarray-dbgsym (in debian/.debhelper/r-bioc-delayedarray/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/r-bioc-delayedarray/DEBIAN/control, package r-bioc-delayedarray, directory debian/r-bioc-delayedarray pkgstripfiles: processing control file: debian/.debhelper/r-bioc-delayedarray/dbgsym-root/DEBIAN/control, package r-bioc-delayedarray-dbgsym, directory debian/.debhelper/r-bioc-delayedarray/dbgsym-root pkgstripfiles: Truncating usr/share/doc/r-bioc-delayedarray/changelog.Debian.gz to topmost ten records dpkg-deb: building package 'r-bioc-delayedarray-dbgsym' in 'debian/.debhelper/scratch-space/build-r-bioc-delayedarray/r-bioc-delayedarray-dbgsym_0.12.0+dfsg-1_i386.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package r-bioc-delayedarray ... pkgstripfiles: No PNG files. dpkg-deb: building package 'r-bioc-delayedarray' in '../r-bioc-delayedarray_0.12.0+dfsg-1_i386.deb'. Renaming r-bioc-delayedarray-dbgsym_0.12.0+dfsg-1_i386.deb to r-bioc-delayedarray-dbgsym_0.12.0+dfsg-1_i386.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../r-bioc-delayedarray_0.12.0+dfsg-1_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20191110-0512 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ r-bioc-delayedarray_0.12.0+dfsg-1_i386.changes: ----------------------------------------------- Format: 1.8 Date: Sat, 09 Nov 2019 22:39:39 +0100 Source: r-bioc-delayedarray Binary: r-bioc-delayedarray Architecture: i386 Version: 0.12.0+dfsg-1 Distribution: focal-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Dylan Aïssi Description: r-bioc-delayedarray - BioConductor delayed operations on array-like objects Changes: r-bioc-delayedarray (0.12.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 Checksums-Sha1: c98f5c99a3c02a346fbf6e3ff2e062436941e811 23440 r-bioc-delayedarray-dbgsym_0.12.0+dfsg-1_i386.ddeb ef66b2b310608bcce7fd85a0fc74491f788168fe 9218 r-bioc-delayedarray_0.12.0+dfsg-1_i386.buildinfo 090117f1af9c86ae186d3a36889988e246c46322 1657744 r-bioc-delayedarray_0.12.0+dfsg-1_i386.deb Checksums-Sha256: 3f270098987bb3d148f3037dead8f5395ad66022dcbd6b59991cefe39d803c99 23440 r-bioc-delayedarray-dbgsym_0.12.0+dfsg-1_i386.ddeb 7b8a58d7428f44c2a38aaffe71ca9f534145aebfa7e6aac74ba0e060372cc589 9218 r-bioc-delayedarray_0.12.0+dfsg-1_i386.buildinfo 4d4eaad5d79fdf14da1dc0d00946cc3c87516e9f71633133b7d8b58ec4194062 1657744 r-bioc-delayedarray_0.12.0+dfsg-1_i386.deb Files: ce0cc2818c3ef614837e34bd4d0d22d5 23440 debug optional r-bioc-delayedarray-dbgsym_0.12.0+dfsg-1_i386.ddeb eb6b7570c762fff403f430de6318f239 9218 gnu-r optional r-bioc-delayedarray_0.12.0+dfsg-1_i386.buildinfo 58ef5b31ef4b2f64766f497bb153d053 1657744 gnu-r optional r-bioc-delayedarray_0.12.0+dfsg-1_i386.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ r-bioc-delayedarray_0.12.0+dfsg-1_i386.deb ------------------------------------------ new debian package, version 2.0. size 1657744 bytes: control archive=2140 bytes. 1227 bytes, 21 lines control 3797 bytes, 41 lines md5sums Package: r-bioc-delayedarray Version: 0.12.0+dfsg-1 Architecture: i386 Maintainer: Ubuntu Developers Original-Maintainer: Debian R Packages Maintainers Installed-Size: 2657 Depends: r-base-core (>= 3.6.1-7), r-api-3.5, r-api-bioc-3.10, r-cran-matrixstats, r-bioc-biocgenerics (>= 0.31.5), r-bioc-s4vectors (>= 0.21.7), r-bioc-iranges (>= 2.17.3), r-bioc-biocparallel, r-cran-matrix, libc6 (>= 2.4) Recommends: r-cran-runit, r-bioc-genefilter Suggests: r-bioc-summarizedexperiment, r-cran-knitr Section: gnu-r Priority: optional Homepage: https://bioconductor.org/packages/DelayedArray/ Description: BioConductor delayed operations on array-like objects Wrapping an array-like object (typically an on-disk object) in a DelayedArray object allows one to perform common array operations on it without loading the object in memory. In order to reduce memory usage and optimize performance, operations on the object are either delayed or executed using a block processing mechanism. Note that this also works on in-memory array-like objects like DataFrame objects (typically with Rle columns), Matrix objects, and ordinary arrays and data frames. drwxr-xr-x root/root 0 2019-11-09 21:39 ./ drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/ drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/lib/ drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/lib/R/ drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/lib/R/site-library/ drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/ -rw-r--r-- root/root 2236 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/DESCRIPTION -rw-r--r-- root/root 1239 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/INDEX drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/Meta/ -rw-r--r-- root/root 3767 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/Meta/Rd.rds -rw-r--r-- root/root 132 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/Meta/features.rds -rw-r--r-- root/root 4036 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/Meta/hsearch.rds -rw-r--r-- root/root 3392 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/Meta/links.rds -rw-r--r-- root/root 1851 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/Meta/nsInfo.rds -rw-r--r-- root/root 1754 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/Meta/package.rds -rw-r--r-- root/root 332 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/Meta/vignette.rds -rw-r--r-- root/root 8018 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/NAMESPACE -rw-r--r-- root/root 7829 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/NEWS drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/R/ -rw-r--r-- root/root 1056 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/R/DelayedArray -rw-r--r-- root/root 2072562 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/R/DelayedArray.rdb -rw-r--r-- root/root 14042 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/R/DelayedArray.rdx drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/doc/ -rw-r--r-- root/root 3303 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/doc/01-Working_with_large_arrays.R -rw-r--r-- root/root 18782 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/doc/01-Working_with_large_arrays.Rnw -rw-r--r-- root/root 182712 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/doc/01-Working_with_large_arrays.pdf -rw-r--r-- root/root 14159 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/doc/02-Implementing_a_backend.Rmd -rw-r--r-- root/root 1991 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/doc/index.html drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/help/ -rw-r--r-- root/root 20109 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/help/AnIndex -rw-r--r-- root/root 129223 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/help/DelayedArray.rdb -rw-r--r-- root/root 722 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/help/DelayedArray.rdx -rw-r--r-- root/root 3651 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/help/aliases.rds -rw-r--r-- root/root 370 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/help/paths.rds drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/html/ -rw-r--r-- root/root 48044 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/html/00Index.html -rw-r--r-- root/root 1335 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/html/R.css drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/libs/ -rw-r--r-- root/root 46648 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/libs/DelayedArray.so drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/ -rw-r--r-- root/root 9501 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_DelayedArray-class.R -rw-r--r-- root/root 10134 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_DelayedArray-utils.R -rw-r--r-- root/root 2115 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_DelayedMatrix-stats.R -rw-r--r-- root/root 4026 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_DelayedMatrix-utils.R -rw-r--r-- root/root 32296 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_DelayedOp-class.R -rw-r--r-- root/root 1969 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_RleArray-class.R -rw-r--r-- root/root 717 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_SparseArraySeed-class.R -rw-r--r-- root/root 980 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_aperm2.R -rw-r--r-- root/root 5435 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_bind-arrays.R -rw-r--r-- root/root 2512 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_block_processing.R -rw-r--r-- root/root 7114 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_cbind-methods.R -rw-r--r-- root/root 7711 2019-11-09 21:39 ./usr/lib/R/site-library/DelayedArray/unitTests/test_makeCappedVolumeBox.R drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/share/ drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-11-09 21:39 ./usr/share/doc/r-bioc-delayedarray/ -rw-r--r-- root/root 650 2019-11-09 21:39 ./usr/share/doc/r-bioc-delayedarray/changelog.Debian.gz -rw-r--r-- root/root 5324 2019-11-09 21:39 ./usr/share/doc/r-bioc-delayedarray/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: i386 Build-Space: 5624 Build-Time: 47 Distribution: focal-proposed Host Architecture: i386 Install-Time: 28 Job: r-bioc-delayedarray_0.12.0+dfsg-1.dsc Machine Architecture: amd64 Package: r-bioc-delayedarray Package-Time: 76 Source-Version: 0.12.0+dfsg-1 Space: 5624 Status: successful Version: 0.12.0+dfsg-1 -------------------------------------------------------------------------------- Finished at 20191110-0512 Build needed 00:01:16, 5624k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=i386 PACKAGEBUILD-18079693 Scanning for processes to kill in build PACKAGEBUILD-18079693