https://launchpad.net/ubuntu/+source/r-bioc-ensembldb/2.10.2+dfsg-1/+build/18166610
RUN: /usr/share/launchpad-buildd/bin/builder-prep 
Kernel version: Linux lcy01-amd64-015 4.4.0-169-generic #198-Ubuntu SMP Tue Nov 12 10:38:00 UTC 2019 x86_64
Buildd toolchain package versions: launchpad-buildd_181 python-lpbuildd_181 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2.
Syncing the system clock with the buildd NTP service...
26 Nov 23:11:42 ntpdate[1918]: adjust time server 10.211.37.1 offset 0.000779 sec
RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18166610 --image-type chroot /home/buildd/filecache-default/e96c25c651525abc9f0cabeb95ea71010abf4ecb
Creating target for build PACKAGEBUILD-18166610
RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18166610
Starting target for build PACKAGEBUILD-18166610
RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18166610 'deb http://ftpmaster.internal/ubuntu focal main universe' 'deb http://ftpmaster.internal/ubuntu focal-security main universe' 'deb http://ftpmaster.internal/ubuntu focal-updates main universe' 'deb http://ftpmaster.internal/ubuntu focal-proposed main universe'
Overriding sources.list in build-PACKAGEBUILD-18166610
RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18166610
Updating target for build PACKAGEBUILD-18166610
Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB]
Get:2 http://ftpmaster.internal/ubuntu focal-security InRelease [79.7 kB]
Get:3 http://ftpmaster.internal/ubuntu focal-updates InRelease [79.7 kB]
Get:4 http://ftpmaster.internal/ubuntu focal-proposed InRelease [107 kB]
Get:5 http://ftpmaster.internal/ubuntu focal/main amd64 Packages [974 kB]
Get:6 http://ftpmaster.internal/ubuntu focal/main Translation-en [504 kB]
Get:7 http://ftpmaster.internal/ubuntu focal/universe amd64 Packages [8725 kB]
Get:8 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5189 kB]
Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 Packages [95.5 kB]
Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main Translation-en [46.3 kB]
Get:11 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 Packages [358 kB]
Get:12 http://ftpmaster.internal/ubuntu focal-proposed/universe Translation-en [188 kB]
Fetched 16.6 MB in 5s (3194 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following packages were automatically installed and are no longer required:
  libhogweed4 libnettle6 libperl5.28 perl-modules-5.28
Use 'sudo apt autoremove' to remove them.
The following NEW packages will be installed:
  libhogweed5 libnettle7 libperl5.30 perl-modules-5.30
The following packages will be upgraded:
  base-files bash binutils binutils-common binutils-x86-64-linux-gnu bsdutils
  bzip2 cpp-9 debianutils fdisk g++-9 gcc-9 gcc-9-base gpg gpg-agent gpgconf
  gpgv hostname libacl1 libapparmor1 libasan5 libatomic1 libattr1
  libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libcap-ng0
  libcap2 libcc1-0 libcryptsetup12 libdebconfclient0 libdevmapper1.02.1
  libfdisk1 libgcc-9-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libitm1
  libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblsan0 liblz4-1 libmount1
  libncurses6 libncursesw6 libp11-kit0 libquadmath0 libseccomp2 libselinux1
  libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libstdc++-9-dev
  libstdc++6 libsystemd0 libtinfo6 libtsan0 libubsan1 libudev1 libuuid1
  libzstd1 linux-libc-dev lsb-base mount ncurses-base ncurses-bin perl
  perl-base systemd systemd-sysv sysvinit-utils util-linux
78 upgraded, 4 newly installed, 0 to remove and 0 not upgraded.
Need to get 60.4 MB of archives.
After this operation, 49.2 MB of additional disk space will be used.
Get:1 http://ftpmaster.internal/ubuntu focal/main amd64 base-files amd64 11ubuntu1 [60.5 kB]
Get:2 http://ftpmaster.internal/ubuntu focal/main amd64 debianutils amd64 4.9 [85.9 kB]
Get:3 http://ftpmaster.internal/ubuntu focal/main amd64 bash amd64 5.0-5ubuntu1 [639 kB]
Get:4 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 bsdutils amd64 1:2.34-0.1ubuntu3 [63.8 kB]
Get:5 http://ftpmaster.internal/ubuntu focal/main amd64 hostname amd64 3.23 [11.4 kB]
Get:6 http://ftpmaster.internal/ubuntu focal/main amd64 ncurses-bin amd64 6.1+20191019-1ubuntu1 [172 kB]
Get:7 http://ftpmaster.internal/ubuntu focal/main amd64 perl-modules-5.30 all 5.30.0-9 [2739 kB]
Get:8 http://ftpmaster.internal/ubuntu focal/main amd64 libperl5.30 amd64 5.30.0-9 [3950 kB]
Get:9 http://ftpmaster.internal/ubuntu focal/main amd64 perl amd64 5.30.0-9 [224 kB]
Get:10 http://ftpmaster.internal/ubuntu focal/main amd64 perl-base amd64 5.30.0-9 [1511 kB]
Get:11 http://ftpmaster.internal/ubuntu focal/main amd64 bzip2 amd64 1.0.8-2 [34.1 kB]
Get:12 http://ftpmaster.internal/ubuntu focal/main amd64 libbz2-1.0 amd64 1.0.8-2 [32.3 kB]
Get:13 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libblkid1 amd64 2.34-0.1ubuntu3 [138 kB]
Get:14 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libuuid1 amd64 2.34-0.1ubuntu3 [20.7 kB]
Get:15 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libfdisk1 amd64 2.34-0.1ubuntu3 [175 kB]
Get:16 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libselinux1 amd64 2.9-3 [69.6 kB]
Get:17 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libmount1 amd64 2.34-0.1ubuntu3 [149 kB]
Get:18 http://ftpmaster.internal/ubuntu focal/main amd64 libncurses6 amd64 6.1+20191019-1ubuntu1 [101 kB]
Get:19 http://ftpmaster.internal/ubuntu focal/main amd64 libtinfo6 amd64 6.1+20191019-1ubuntu1 [85.9 kB]
Get:20 http://ftpmaster.internal/ubuntu focal/main amd64 libncursesw6 amd64 6.1+20191019-1ubuntu1 [132 kB]
Get:21 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libsmartcols1 amd64 2.34-0.1ubuntu3 [101 kB]
Get:22 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 fdisk amd64 2.34-0.1ubuntu3 [120 kB]
Get:23 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 util-linux amd64 2.34-0.1ubuntu3 [1021 kB]
Get:24 http://ftpmaster.internal/ubuntu focal/main amd64 ncurses-base all 6.1+20191019-1ubuntu1 [17.9 kB]
Get:25 http://ftpmaster.internal/ubuntu focal/main amd64 lsb-base all 11.1.0ubuntu1 [12.2 kB]
Get:26 http://ftpmaster.internal/ubuntu focal/main amd64 sysvinit-utils amd64 2.96-1ubuntu1 [20.8 kB]
Get:27 http://ftpmaster.internal/ubuntu focal/main amd64 systemd-sysv amd64 243-3ubuntu1 [9364 B]
Get:28 http://ftpmaster.internal/ubuntu focal/main amd64 libacl1 amd64 2.2.53-5 [18.8 kB]
Get:29 http://ftpmaster.internal/ubuntu focal/main amd64 libapparmor1 amd64 2.13.3-5ubuntu5 [34.6 kB]
Get:30 http://ftpmaster.internal/ubuntu focal/main amd64 libaudit-common all 1:2.8.5-2ubuntu3 [4108 B]
Get:31 http://ftpmaster.internal/ubuntu focal/main amd64 libcap-ng0 amd64 0.7.9-2.1 [11.1 kB]
Get:32 http://ftpmaster.internal/ubuntu focal/main amd64 libaudit1 amd64 1:2.8.5-2ubuntu3 [39.1 kB]
Get:33 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libcap2 amd64 1:2.27-1 [14.1 kB]
Get:34 http://ftpmaster.internal/ubuntu focal/main amd64 libudev1 amd64 243-3ubuntu1 [79.1 kB]
Get:35 http://ftpmaster.internal/ubuntu focal/main amd64 libdevmapper1.02.1 amd64 2:1.02.155-2ubuntu7 [127 kB]
Get:36 http://ftpmaster.internal/ubuntu focal/main amd64 libjson-c4 amd64 0.13.1+dfsg-6 [29.2 kB]
Get:37 http://ftpmaster.internal/ubuntu focal/main amd64 libcryptsetup12 amd64 2:2.2.2-1ubuntu1 [182 kB]
Get:38 http://ftpmaster.internal/ubuntu focal/main amd64 libnettle7 amd64 3.5.1+really3.5.1-2 [114 kB]
Get:39 http://ftpmaster.internal/ubuntu focal/main amd64 libhogweed5 amd64 3.5.1+really3.5.1-2 [138 kB]
Get:40 http://ftpmaster.internal/ubuntu focal/main amd64 libp11-kit0 amd64 0.23.18.1-2 [189 kB]
Get:41 http://ftpmaster.internal/ubuntu focal/main amd64 libgnutls30 amd64 3.6.10-5 [785 kB]
Get:42 http://ftpmaster.internal/ubuntu focal/main amd64 libkmod2 amd64 26-3ubuntu1 [42.9 kB]
Get:43 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 liblz4-1 amd64 1.9.2-2 [55.9 kB]
Get:44 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libseccomp2 amd64 2.4.2-2ubuntu1 [39.4 kB]
Get:45 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 mount amd64 2.34-0.1ubuntu3 [115 kB]
Get:46 http://ftpmaster.internal/ubuntu focal/main amd64 systemd amd64 243-3ubuntu1 [3630 kB]
Get:47 http://ftpmaster.internal/ubuntu focal/main amd64 libsystemd0 amd64 243-3ubuntu1 [263 kB]
Get:48 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libcc1-0 amd64 9.2.1-20ubuntu1 [48.9 kB]
Get:49 http://ftpmaster.internal/ubuntu focal/main amd64 binutils-x86-64-linux-gnu amd64 2.33.1-1ubuntu1 [1639 kB]
Get:50 http://ftpmaster.internal/ubuntu focal/main amd64 libbinutils amd64 2.33.1-1ubuntu1 [475 kB]
Get:51 http://ftpmaster.internal/ubuntu focal/main amd64 binutils-common amd64 2.33.1-1ubuntu1 [203 kB]
Get:52 http://ftpmaster.internal/ubuntu focal/main amd64 binutils amd64 2.33.1-1ubuntu1 [3404 B]
Get:53 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libgomp1 amd64 9.2.1-20ubuntu1 [89.2 kB]
Get:54 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libitm1 amd64 9.2.1-20ubuntu1 [28.1 kB]
Get:55 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libatomic1 amd64 9.2.1-20ubuntu1 [9236 B]
Get:56 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libasan5 amd64 9.2.1-20ubuntu1 [395 kB]
Get:57 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 liblsan0 amd64 9.2.1-20ubuntu1 [139 kB]
Get:58 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libtsan0 amd64 9.2.1-20ubuntu1 [301 kB]
Get:59 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libubsan1 amd64 9.2.1-20ubuntu1 [130 kB]
Get:60 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libquadmath0 amd64 9.2.1-20ubuntu1 [146 kB]
Get:61 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 gcc-9-base amd64 9.2.1-20ubuntu1 [19.1 kB]
Get:62 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libstdc++6 amd64 9.2.1-20ubuntu1 [512 kB]
Get:63 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 g++-9 amd64 9.2.1-20ubuntu1 [11.0 MB]
Get:64 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libstdc++-9-dev amd64 9.2.1-20ubuntu1 [1709 kB]
Get:65 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libgcc-9-dev amd64 9.2.1-20ubuntu1 [2359 kB]
Get:66 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 gcc-9 amd64 9.2.1-20ubuntu1 [10.4 MB]
Get:67 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 cpp-9 amd64 9.2.1-20ubuntu1 [9730 kB]
Get:68 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libgcc1 amd64 1:9.2.1-20ubuntu1 [40.8 kB]
Get:69 http://ftpmaster.internal/ubuntu focal/main amd64 libattr1 amd64 1:2.4.48-5 [12.7 kB]
Get:70 http://ftpmaster.internal/ubuntu focal/main amd64 libdebconfclient0 amd64 0.250ubuntu1 [6384 B]
Get:71 http://ftpmaster.internal/ubuntu focal/main amd64 libgcrypt20 amd64 1.8.5-3ubuntu1 [419 kB]
Get:72 http://ftpmaster.internal/ubuntu focal/main amd64 libsemanage-common all 2.9-3build1 [9736 B]
Get:73 http://ftpmaster.internal/ubuntu focal/main amd64 libsemanage1 amd64 2.9-3build1 [85.5 kB]
Get:74 http://ftpmaster.internal/ubuntu focal/main amd64 libzstd1 amd64 1.4.4+dfsg-1 [237 kB]
Get:75 http://ftpmaster.internal/ubuntu focal/main amd64 gpgv amd64 2.2.17-3ubuntu1 [200 kB]
Get:76 http://ftpmaster.internal/ubuntu focal/main amd64 libsqlite3-0 amd64 3.30.1-1 [539 kB]
Get:77 http://ftpmaster.internal/ubuntu focal/main amd64 gpg amd64 2.2.17-3ubuntu1 [479 kB]
Get:78 http://ftpmaster.internal/ubuntu focal/main amd64 gpgconf amd64 2.2.17-3ubuntu1 [124 kB]
Get:79 http://ftpmaster.internal/ubuntu focal/main amd64 gpg-agent amd64 2.2.17-3ubuntu1 [232 kB]
Get:80 http://ftpmaster.internal/ubuntu focal/main amd64 liblockfile-bin amd64 1.16-1.1 [11.7 kB]
Get:81 http://ftpmaster.internal/ubuntu focal/main amd64 liblockfile1 amd64 1.16-1.1 [6680 B]
Get:82 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 linux-libc-dev amd64 5.3.0-24.26 [1096 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Unpacking base-files (11ubuntu1) over (10.2ubuntu7) ...
Setting up base-files (11ubuntu1) ...
Installing new version of config file /etc/debian_version ...
Installing new version of config file /etc/issue ...
Installing new version of config file /etc/issue.net ...
Installing new version of config file /etc/lsb-release ...
Updating /root/.profile to current default.
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Unpacking bash (5.0-5ubuntu1) over (5.0-4ubuntu1) ...
Setting up bash (5.0-5ubuntu1) ...
update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode
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Unpacking ncurses-bin (6.1+20191019-1ubuntu1) over (6.1+20190803-1ubuntu1) ...
Setting up ncurses-bin (6.1+20191019-1ubuntu1) ...
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Preparing to unpack .../perl_5.30.0-9_amd64.deb ...
Unpacking perl (5.30.0-9) over (5.28.1-6build1) ...
Replacing files in old package perl-base (5.28.1-6build1) ...
Selecting previously unselected package perl-modules-5.30.
Preparing to unpack .../perl-modules-5.30_5.30.0-9_all.deb ...
Unpacking perl-modules-5.30 (5.30.0-9) ...
Selecting previously unselected package libperl5.30:amd64.
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Unpacking libblkid1:amd64 (2.34-0.1ubuntu3) over (2.34-0.1ubuntu2) ...
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RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18166610 amd64 focal-proposed -c chroot:build-PACKAGEBUILD-18166610 --arch=amd64 --dist=focal-proposed --nolog -A r-bioc-ensembldb_2.10.2+dfsg-1.dsc
Initiating build PACKAGEBUILD-18166610 with 4 jobs across 4 processor cores.
Kernel reported to sbuild: 4.4.0-169-generic #198-Ubuntu SMP Tue Nov 12 10:38:00 UTC 2019 x86_64
sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lcy01-amd64-015.buildd

+==============================================================================+
| r-bioc-ensembldb 2.10.2+dfsg-1 (amd64)                     26 Nov 2019 23:12 |
+==============================================================================+

Package: r-bioc-ensembldb
Version: 2.10.2+dfsg-1
Source Version: 2.10.2+dfsg-1
Distribution: focal-proposed
Machine Architecture: amd64
Host Architecture: amd64
Build Architecture: amd64

I: NOTICE: Log filtering will replace 'build/r-bioc-ensembldb-tokZrJ/r-bioc-ensembldb-2.10.2+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-bioc-ensembldb-tokZrJ' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18166610/chroot-autobuild' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


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r-bioc-ensembldb_2.10.2+dfsg-1.dsc exists in .; copying to chroot

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The following packages were automatically installed and are no longer required:
  libhogweed4 libnettle6 libperl5.28 perl-modules-5.28
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Filtered Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-bioc-biocgenerics (>= 0.15.10), r-bioc-genomicranges (>= 1.31.18), r-bioc-genomicfeatures (>= 1.29.10), r-bioc-annotationfilter, r-cran-rsqlite (>= 1.1), r-cran-dbi, r-bioc-biobase, r-bioc-genomeinfodb, r-bioc-annotationdbi (>= 1.31.19), r-bioc-rtracklayer, r-bioc-s4vectors (>= 0.23.10), r-bioc-rsamtools, r-bioc-iranges (>= 2.13.24), r-bioc-protgenerics, r-bioc-biostrings (>= 2.47.9), r-cran-curl
dpkg-deb: building package 'sbuild-build-depends-r-bioc-ensembldb-dummy' in '/<<BUILDDIR>>/resolver-XpV93U/apt_archive/sbuild-build-depends-r-bioc-ensembldb-dummy.deb'.
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+------------------------------------------------------------------------------+
| Install r-bioc-ensembldb build dependencies (apt-based resolver)             |
+------------------------------------------------------------------------------+

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libhogweed4 libnettle6 libperl5.28 perl-modules-5.28
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper
  dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
  fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-9
  groff-base icu-devtools intltool-debian libarchive-zip-perl
  libasn1-8-heimdal libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev
  libcairo2 libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
  libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
  libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5 libglib2.0-0
  libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libharfbuzz0b
  libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal
  libhx509-5-heimdal libice6 libicu-dev libicu63 libjbig0 libjpeg-dev
  libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3
  libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev
  liblapack3 libldap-2.4-2 libldap-common liblzma-dev libmagic-mgc libmagic1
  libncurses-dev libncurses5-dev libnghttp2-14 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3
  libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix0 libpcre3-dev
  libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5
  libreadline-dev libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db
  libsigsegv2 libsm6 libssh-4 libsub-override-perl libswitch-perl libtcl8.6
  libthai-data libthai0 libtiff5 libtk8.6 libtool libuchardet0 libwebp6
  libwind0-heimdal libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
  libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1
  libxt6 littler m4 man-db pkg-config po-debconf r-base-core r-base-dev
  r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase
  r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocparallel r-bioc-biomart
  r-bioc-biostrings r-bioc-delayedarray r-bioc-genomeinfodb
  r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures
  r-bioc-genomicranges r-bioc-iranges r-bioc-protgenerics r-bioc-rsamtools
  r-bioc-rtracklayer r-bioc-s4vectors r-bioc-summarizedexperiment
  r-bioc-xvector r-bioc-zlibbioc r-cran-askpass r-cran-assertthat
  r-cran-backports r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob
  r-cran-cli r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-digest
  r-cran-dplyr r-cran-ellipsis r-cran-fansi r-cran-formatr
  r-cran-futile.logger r-cran-futile.options r-cran-glue r-cran-hms
  r-cran-httr r-cran-jsonlite r-cran-lambda.r r-cran-lattice r-cran-lazyeval
  r-cran-littler r-cran-magrittr r-cran-matrix r-cran-matrixstats
  r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgconfig
  r-cran-pkgkitten r-cran-prettyunits r-cran-progress r-cran-purrr r-cran-r6
  r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-rlang r-cran-rsqlite
  r-cran-snow r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble
  r-cran-tidyselect r-cran-utf8 r-cran-vctrs r-cran-xml r-cran-zeallot ucf
  unzip x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation debtags dh-make gettext-doc libasprintf-dev libgettextpo-dev
  gfortran-multilib gfortran-doc gfortran-9-multilib gfortran-9-doc
  libgfortran5-dbg libcoarrays-dev groff liblapack-doc krb5-doc krb5-user
  icu-doc liblzma-doc ncurses-doc readline-doc tcl8.6 tk8.6 libtool-doc
  gcj-jdk m4-doc apparmor less www-browser libmail-box-perl elpa-ess
  r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
  texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra
  texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
  r-bioc-graph r-cran-knitr r-cran-rmarkdown r-bioc-affy r-bioc-deseq2
  r-bioc-annotate r-cran-foreach r-cran-bbmisc r-bioc-variantannotation
  r-bioc-shortread r-cran-codetools r-cran-data.table r-cran-testthat
  r-bioc-bsgenome r-bioc-ensembldb r-cran-runit r-bioc-gviz
  r-bioc-annotationhub r-bioc-genefilter r-bioc-limma r-bioc-rhdf5
  r-cran-webshot r-cran-rstudioapi r-cran-rmysql r-cran-withr r-cran-callr
  r-cran-ggplot2 r-cran-lubridate r-cran-mgcv r-cran-rpostgresql r-cran-broom
  r-cran-readr r-cran-shiny r-cran-r.utils r-cran-forcats r-cran-httpuv
  r-cran-jpeg r-cran-png r-cran-xml2 r-cran-plyr r-cran-getopt
  r-cran-base64enc libgdal-dev r-cran-covr r-cran-scales r-cran-inline
  r-cran-rmpi r-cran-rsprng r-cran-rlecuyer r-cran-htmltools r-cran-generics
Recommended packages:
  devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
  shared-mime-info xdg-user-dirs krb5-locales libpng-tools publicsuffix
  libsasl2-modules libltdl-dev libmail-sendmail-perl r-recommended r-doc-html
  r-bioc-go.db r-cran-runit r-cran-testthat r-cran-batchjobs r-cran-doparallel
  r-cran-batchtools r-cran-rmpi r-bioc-genefilter r-bioc-shortread
  r-bioc-annotate r-cran-withr r-cran-mockery r-cran-httpuv r-cran-webutils
  r-cran-rmysql r-cran-rpostgresql r-cran-data.table r-cran-mass r-cran-testit
  r-cran-codetools r-cran-survival r-cran-sp r-cran-lubridate r-cran-rmarkdown
  r-cran-dbitest r-cran-htmltools r-cran-htmlwidgets r-cran-knitr r-cran-mockr
  libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
  x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper
  dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
  fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-9
  groff-base icu-devtools intltool-debian libarchive-zip-perl
  libasn1-8-heimdal libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev
  libcairo2 libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
  libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
  libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5 libglib2.0-0
  libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libharfbuzz0b
  libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal
  libhx509-5-heimdal libice6 libicu-dev libicu63 libjbig0 libjpeg-dev
  libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3
  libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev
  liblapack3 libldap-2.4-2 libldap-common liblzma-dev libmagic-mgc libmagic1
  libncurses-dev libncurses5-dev libnghttp2-14 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3
  libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix0 libpcre3-dev
  libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5
  libreadline-dev libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db
  libsigsegv2 libsm6 libssh-4 libsub-override-perl libswitch-perl libtcl8.6
  libthai-data libthai0 libtiff5 libtk8.6 libtool libuchardet0 libwebp6
  libwind0-heimdal libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
  libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1
  libxt6 littler m4 man-db pkg-config po-debconf r-base-core r-base-dev
  r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase
  r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocparallel r-bioc-biomart
  r-bioc-biostrings r-bioc-delayedarray r-bioc-genomeinfodb
  r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures
  r-bioc-genomicranges r-bioc-iranges r-bioc-protgenerics r-bioc-rsamtools
  r-bioc-rtracklayer r-bioc-s4vectors r-bioc-summarizedexperiment
  r-bioc-xvector r-bioc-zlibbioc r-cran-askpass r-cran-assertthat
  r-cran-backports r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob
  r-cran-cli r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-digest
  r-cran-dplyr r-cran-ellipsis r-cran-fansi r-cran-formatr
  r-cran-futile.logger r-cran-futile.options r-cran-glue r-cran-hms
  r-cran-httr r-cran-jsonlite r-cran-lambda.r r-cran-lattice r-cran-lazyeval
  r-cran-littler r-cran-magrittr r-cran-matrix r-cran-matrixstats
  r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgconfig
  r-cran-pkgkitten r-cran-prettyunits r-cran-progress r-cran-purrr r-cran-r6
  r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-rlang r-cran-rsqlite
  r-cran-snow r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble
  r-cran-tidyselect r-cran-utf8 r-cran-vctrs r-cran-xml r-cran-zeallot
  sbuild-build-depends-r-bioc-ensembldb-dummy ucf unzip x11-common xauth
  xdg-utils zip zlib1g-dev
0 upgraded, 218 newly installed, 0 to remove and 0 not upgraded.
Need to get 163 MB of archives.
After this operation, 404 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-XpV93U/apt_archive ./ sbuild-build-depends-r-bioc-ensembldb-dummy 0.invalid.0 [1040 B]
Get:2 http://ftpmaster.internal/ubuntu focal/main amd64 libbsd0 amd64 0.10.0-1 [45.4 kB]
Get:3 http://ftpmaster.internal/ubuntu focal/main amd64 bsdmainutils amd64 11.1.2ubuntu2 [181 kB]
Get:4 http://ftpmaster.internal/ubuntu focal/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB]
Get:5 http://ftpmaster.internal/ubuntu focal/main amd64 groff-base amd64 1.22.4-3 [862 kB]
Get:6 http://ftpmaster.internal/ubuntu focal/main amd64 libpipeline1 amd64 1.5.1-2 [25.9 kB]
Get:7 http://ftpmaster.internal/ubuntu focal/main amd64 man-db amd64 2.9.0-1 [1115 kB]
Get:8 http://ftpmaster.internal/ubuntu focal/main amd64 libmagic-mgc amd64 1:5.37-6 [209 kB]
Get:9 http://ftpmaster.internal/ubuntu focal/main amd64 libmagic1 amd64 1:5.37-6 [75.3 kB]
Get:10 http://ftpmaster.internal/ubuntu focal/main amd64 file amd64 1:5.37-6 [23.2 kB]
Get:11 http://ftpmaster.internal/ubuntu focal/main amd64 libelf1 amd64 0.176-1.1 [44.1 kB]
Get:12 http://ftpmaster.internal/ubuntu focal/main amd64 libexpat1 amd64 2.2.9-1 [73.3 kB]
Get:13 http://ftpmaster.internal/ubuntu focal/main amd64 libfribidi0 amd64 1.0.7-1.1 [23.6 kB]
Get:14 http://ftpmaster.internal/ubuntu focal/main amd64 libglib2.0-0 amd64 2.63.1-2 [1270 kB]
Get:15 http://ftpmaster.internal/ubuntu focal/main amd64 libicu63 amd64 63.2-2 [8294 kB]
Get:16 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libxml2 amd64 2.9.4+dfsg1-8ubuntu1 [648 kB]
Get:17 http://ftpmaster.internal/ubuntu focal/main amd64 ucf all 3.0038+nmu1 [51.6 kB]
Get:18 http://ftpmaster.internal/ubuntu focal/main amd64 gettext-base amd64 0.19.8.1-10 [50.2 kB]
Get:19 http://ftpmaster.internal/ubuntu focal/main amd64 libkrb5support0 amd64 1.17-6 [31.4 kB]
Get:20 http://ftpmaster.internal/ubuntu focal/main amd64 libk5crypto3 amd64 1.17-6 [80.2 kB]
Get:21 http://ftpmaster.internal/ubuntu focal/main amd64 libkeyutils1 amd64 1.6-6ubuntu1 [10.2 kB]
Get:22 http://ftpmaster.internal/ubuntu focal/main amd64 libkrb5-3 amd64 1.17-6 [330 kB]
Get:23 http://ftpmaster.internal/ubuntu focal/main amd64 libgssapi-krb5-2 amd64 1.17-6 [121 kB]
Get:24 http://ftpmaster.internal/ubuntu focal/main amd64 libpsl5 amd64 0.20.2-2 [50.0 kB]
Get:25 http://ftpmaster.internal/ubuntu focal/main amd64 libxau6 amd64 1:1.0.9-0ubuntu1 [7488 B]
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Get:27 http://ftpmaster.internal/ubuntu focal/main amd64 libxcb1 amd64 1.13.1-2 [45.2 kB]
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Get:30 http://ftpmaster.internal/ubuntu focal/main amd64 libxext6 amd64 2:1.3.4-0ubuntu1 [29.1 kB]
Get:31 http://ftpmaster.internal/ubuntu focal/main amd64 libxmuu1 amd64 2:1.1.3-0ubuntu1 [9728 B]
Get:32 http://ftpmaster.internal/ubuntu focal/main amd64 xauth amd64 1:1.1-0ubuntu1 [25.0 kB]
Get:33 http://ftpmaster.internal/ubuntu focal/main amd64 libsigsegv2 amd64 2.12-2 [13.9 kB]
Get:34 http://ftpmaster.internal/ubuntu focal/main amd64 m4 amd64 1.4.18-4 [199 kB]
Get:35 http://ftpmaster.internal/ubuntu focal/main amd64 autoconf all 2.69-11ubuntu1 [321 kB]
Get:36 http://ftpmaster.internal/ubuntu focal/main amd64 autotools-dev all 20180224.1 [39.6 kB]
Get:37 http://ftpmaster.internal/ubuntu focal/main amd64 automake all 1:1.16.1-4ubuntu3 [522 kB]
Get:38 http://ftpmaster.internal/ubuntu focal/main amd64 autopoint all 0.19.8.1-10 [412 kB]
Get:39 http://ftpmaster.internal/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB]
Get:40 http://ftpmaster.internal/ubuntu focal/main amd64 libtool all 2.4.6-11 [194 kB]
Get:41 http://ftpmaster.internal/ubuntu focal/main amd64 dh-autoreconf all 19 [16.1 kB]
Get:42 http://ftpmaster.internal/ubuntu focal/main amd64 libdebhelper-perl all 12.7.1ubuntu1 [52.0 kB]
Get:43 http://ftpmaster.internal/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-1 [90.4 kB]
Get:44 http://ftpmaster.internal/ubuntu focal/main amd64 libsub-override-perl all 0.09-2 [9532 B]
Get:45 http://ftpmaster.internal/ubuntu focal/main amd64 libfile-stripnondeterminism-perl all 1.6.3-1 [16.0 kB]
Get:46 http://ftpmaster.internal/ubuntu focal/main amd64 dh-strip-nondeterminism all 1.6.3-1 [5224 B]
Get:47 http://ftpmaster.internal/ubuntu focal/main amd64 dwz amd64 0.13-2 [145 kB]
Get:48 http://ftpmaster.internal/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB]
Get:49 http://ftpmaster.internal/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10 [897 kB]
Get:50 http://ftpmaster.internal/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB]
Get:51 http://ftpmaster.internal/ubuntu focal/main amd64 po-debconf all 1.0.21 [233 kB]
Get:52 http://ftpmaster.internal/ubuntu focal/main amd64 debhelper all 12.7.1ubuntu1 [875 kB]
Get:53 http://ftpmaster.internal/ubuntu focal/main amd64 zip amd64 3.0-11build1 [167 kB]
Get:54 http://ftpmaster.internal/ubuntu focal/main amd64 unzip amd64 6.0-25ubuntu1 [169 kB]
Get:55 http://ftpmaster.internal/ubuntu focal/main amd64 libpaper1 amd64 1.1.28 [13.0 kB]
Get:56 http://ftpmaster.internal/ubuntu focal/main amd64 libpaper-utils amd64 1.1.28 [8400 B]
Get:57 http://ftpmaster.internal/ubuntu focal/main amd64 xdg-utils all 1.1.3-1ubuntu2 [60.5 kB]
Get:58 http://ftpmaster.internal/ubuntu focal/main amd64 libblas3 amd64 3.9.0-1 [142 kB]
Get:59 http://ftpmaster.internal/ubuntu focal/main amd64 libfreetype6 amd64 2.10.1-2 [341 kB]
Get:60 http://ftpmaster.internal/ubuntu focal/main amd64 fonts-dejavu-core all 2.37-1 [1041 kB]
Get:61 http://ftpmaster.internal/ubuntu focal/main amd64 fontconfig-config all 2.13.1-2ubuntu2 [28.9 kB]
Get:62 http://ftpmaster.internal/ubuntu focal/main amd64 libfontconfig1 amd64 2.13.1-2ubuntu2 [114 kB]
Get:63 http://ftpmaster.internal/ubuntu focal/main amd64 libpixman-1-0 amd64 0.38.4-0ubuntu1 [227 kB]
Get:64 http://ftpmaster.internal/ubuntu focal/main amd64 libxcb-render0 amd64 1.13.1-2 [14.8 kB]
Get:65 http://ftpmaster.internal/ubuntu focal/main amd64 libxcb-shm0 amd64 1.13.1-2 [5548 B]
Get:66 http://ftpmaster.internal/ubuntu focal/main amd64 libxrender1 amd64 1:0.9.10-1 [18.7 kB]
Get:67 http://ftpmaster.internal/ubuntu focal/main amd64 libcairo2 amd64 1.16.0-4 [583 kB]
Get:68 http://ftpmaster.internal/ubuntu focal/main amd64 libbrotli1 amd64 1.0.7-5 [265 kB]
Get:69 http://ftpmaster.internal/ubuntu focal/main amd64 libroken18-heimdal amd64 7.5.0+dfsg-3build1 [41.8 kB]
Get:70 http://ftpmaster.internal/ubuntu focal/main amd64 libasn1-8-heimdal amd64 7.5.0+dfsg-3build1 [181 kB]
Get:71 http://ftpmaster.internal/ubuntu focal/main amd64 libheimbase1-heimdal amd64 7.5.0+dfsg-3build1 [29.7 kB]
Get:72 http://ftpmaster.internal/ubuntu focal/main amd64 libhcrypto4-heimdal amd64 7.5.0+dfsg-3build1 [87.2 kB]
Get:73 http://ftpmaster.internal/ubuntu focal/main amd64 libwind0-heimdal amd64 7.5.0+dfsg-3build1 [47.9 kB]
Get:74 http://ftpmaster.internal/ubuntu focal/main amd64 libhx509-5-heimdal amd64 7.5.0+dfsg-3build1 [107 kB]
Get:75 http://ftpmaster.internal/ubuntu focal/main amd64 libkrb5-26-heimdal amd64 7.5.0+dfsg-3build1 [206 kB]
Get:76 http://ftpmaster.internal/ubuntu focal/main amd64 libheimntlm0-heimdal amd64 7.5.0+dfsg-3build1 [15.0 kB]
Get:77 http://ftpmaster.internal/ubuntu focal/main amd64 libgssapi3-heimdal amd64 7.5.0+dfsg-3build1 [96.0 kB]
Get:78 http://ftpmaster.internal/ubuntu focal/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1build3 [14.6 kB]
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Get:80 http://ftpmaster.internal/ubuntu focal/main amd64 libldap-common all 2.4.48+dfsg-1ubuntu3 [17.3 kB]
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Get:82 http://ftpmaster.internal/ubuntu focal/main amd64 libnghttp2-14 amd64 1.40.0-1 [78.1 kB]
Get:83 http://ftpmaster.internal/ubuntu focal/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2build1 [54.9 kB]
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Get:110 http://ftpmaster.internal/ubuntu focal/universe amd64 r-base-core amd64 3.6.1-7 [24.5 MB]
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Get:112 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 gfortran-9 amd64 9.2.1-20ubuntu1 [10.4 MB]
Get:113 http://ftpmaster.internal/ubuntu focal/main amd64 gfortran amd64 4:9.2.1-3.1ubuntu1 [1376 B]
Get:114 http://ftpmaster.internal/ubuntu focal/main amd64 libblas-dev amd64 3.9.0-1 [147 kB]
Get:115 http://ftpmaster.internal/ubuntu focal/main amd64 liblapack-dev amd64 3.9.0-1 [4243 kB]
Get:116 http://ftpmaster.internal/ubuntu focal/main amd64 libncurses-dev amd64 6.1+20191019-1ubuntu1 [339 kB]
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Get:118 http://ftpmaster.internal/ubuntu focal/main amd64 libreadline-dev amd64 8.0-3 [141 kB]
Get:119 http://ftpmaster.internal/ubuntu focal/main amd64 libjpeg-turbo8-dev amd64 2.0.3-0ubuntu1 [238 kB]
Get:120 http://ftpmaster.internal/ubuntu focal/main amd64 libjpeg8-dev amd64 8c-2ubuntu8 [1552 B]
Get:121 http://ftpmaster.internal/ubuntu focal/main amd64 libjpeg-dev amd64 8c-2ubuntu8 [1546 B]
Get:122 http://ftpmaster.internal/ubuntu focal/main amd64 libpcre2-16-0 amd64 10.32-5 [170 kB]
Get:123 http://ftpmaster.internal/ubuntu focal/main amd64 libpcre2-32-0 amd64 10.32-5 [162 kB]
Get:124 http://ftpmaster.internal/ubuntu focal/main amd64 libpcre2-posix0 amd64 10.32-5 [5712 B]
Get:125 http://ftpmaster.internal/ubuntu focal/main amd64 libpcre2-dev amd64 10.32-5 [631 kB]
Get:126 http://ftpmaster.internal/ubuntu focal/main amd64 libpcre16-3 amd64 2:8.39-12 [149 kB]
Get:127 http://ftpmaster.internal/ubuntu focal/main amd64 libpcre32-3 amd64 2:8.39-12 [140 kB]
Get:128 http://ftpmaster.internal/ubuntu focal/main amd64 libpcrecpp0v5 amd64 2:8.39-12 [15.4 kB]
Get:129 http://ftpmaster.internal/ubuntu focal/main amd64 libpcre3-dev amd64 2:8.39-12 [542 kB]
Get:130 http://ftpmaster.internal/ubuntu focal/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-1ubuntu3 [172 kB]
Get:131 http://ftpmaster.internal/ubuntu focal/main amd64 libpng-dev amd64 1.6.37-1 [176 kB]
Get:132 http://ftpmaster.internal/ubuntu focal/main amd64 libbz2-dev amd64 1.0.8-2 [30.2 kB]
Get:133 http://ftpmaster.internal/ubuntu focal/main amd64 liblzma-dev amd64 5.2.4-1 [145 kB]
Get:134 http://ftpmaster.internal/ubuntu focal/main amd64 icu-devtools amd64 63.2-2 [180 kB]
Get:135 http://ftpmaster.internal/ubuntu focal/main amd64 libicu-dev amd64 63.2-2 [9178 kB]
Get:136 http://ftpmaster.internal/ubuntu focal/main amd64 pkg-config amd64 0.29.1-0ubuntu3 [45.2 kB]
Get:137 http://ftpmaster.internal/ubuntu focal/universe amd64 r-base-dev all 3.6.1-7 [4528 B]
Get:138 http://ftpmaster.internal/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB]
Get:139 http://ftpmaster.internal/ubuntu focal/universe amd64 libswitch-perl all 2.17-2 [18.8 kB]
Get:140 http://ftpmaster.internal/ubuntu focal/universe amd64 dh-r all 20190917 [32.7 kB]
Get:141 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-littler amd64 0.3.9-1 [300 kB]
Get:142 http://ftpmaster.internal/ubuntu focal/universe amd64 littler all 0.3.9-1 [2420 B]
Get:143 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-biocgenerics all 0.32.0-1 [639 kB]
Get:144 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-biobase amd64 2.46.0-1 [2221 kB]
Get:145 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-s4vectors amd64 0.24.0-1 [1937 kB]
Get:146 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-iranges amd64 2.20.1-1 [2205 kB]
Get:147 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-dbi all 1.0.0-2 [789 kB]
Get:148 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-bit amd64 1.1-14-1build1 [221 kB]
Get:149 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-bit64 amd64 0.9-7-3 [438 kB]
Get:150 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-magrittr all 1.5-5 [152 kB]
Get:151 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-assertthat all 0.2.1-1 [56.7 kB]
Get:152 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-prettyunits all 1.0.2-3 [32.7 kB]
Get:153 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-cran-rlang amd64 0.4.1-1 [1096 kB]
Get:154 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-backports amd64 1.1.5-1 [58.2 kB]
Get:155 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-ellipsis amd64 0.3.0-1 [30.6 kB]
Get:156 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-digest amd64 0.6.23-1 [171 kB]
Get:157 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-glue amd64 1.3.1-1 [152 kB]
Get:158 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-zeallot all 0.1.0-2 [60.0 kB]
Get:159 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-vctrs amd64 0.2.0-1 [695 kB]
Get:160 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-blob all 1.2.0-1 [46.1 kB]
Get:161 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-memoise all 1.1.0-2 [38.8 kB]
Get:162 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-pkgconfig all 2.0.3-1 [19.7 kB]
Get:163 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-pkgkitten all 0.1.5-1 [22.6 kB]
Get:164 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-rcpp amd64 1.0.3-1 [1868 kB]
Get:165 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-rsqlite amd64 2.1.2-1 [898 kB]
Get:166 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-annotationdbi all 1.48.0-1 [4623 kB]
Get:167 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-bitops amd64 1.0-6-4 [23.5 kB]
Get:168 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-rcurl amd64 1.95-4.12-1 [721 kB]
Get:169 http://ftpmaster.internal/ubuntu focal/universe amd64 r-bioc-genomeinfodbdata all 1.2.2-1 [10.2 MB]
Get:170 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-genomeinfodb all 1.22.0-1 [3686 kB]
Get:171 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-zlibbioc all 1.32.0+dfsg-1 [8820 B]
Get:172 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-xvector amd64 0.26.0-1 [612 kB]
Get:173 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-genomicranges amd64 1.38.0+dfsg-1 [1833 kB]
Get:174 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-lazyeval amd64 0.2.2-1 [144 kB]
Get:175 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-annotationfilter all 1.10.0+dfsg-1 [188 kB]
Get:176 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-cran-r6 all 2.4.1-1 [79.4 kB]
Get:177 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-crayon all 1.3.4-4ubuntu1 [499 kB]
Get:178 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-cli all 1.1.0-1 [175 kB]
Get:179 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-fansi amd64 0.4.0-1 [339 kB]
Get:180 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-utf8 amd64 1.1.4-1build1 [130 kB]
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Get:182 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-tibble amd64 2.1.3-1 [324 kB]
Get:183 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-cran-purrr amd64 0.3.3-1 [394 kB]
Get:184 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-tidyselect amd64 0.2.5-1 [117 kB]
Get:185 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-dplyr amd64 0.8.3-1 [1881 kB]
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Get:187 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-rappdirs amd64 0.3.1-1build1 [95.0 kB]
Get:188 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-curl amd64 4.2+dfsg-1 [148 kB]
Get:189 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-jsonlite amd64 1.6+dfsg-1 [437 kB]
Get:190 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-mime amd64 0.7-1 [35.4 kB]
Get:191 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-sys amd64 3.3-1 [43.4 kB]
Get:192 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-askpass amd64 1.1-1 [22.0 kB]
Get:193 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-openssl amd64 1.2.2+dfsg-1ubuntu1 [347 kB]
Get:194 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-cran-httr all 1.4.1-1 [480 kB]
Get:195 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-biocfilecache all 1.10.2+dfsg-1 [248 kB]
Get:196 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-formatr all 1.7-1 [147 kB]
Get:197 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-lambda.r all 1.2.4-1 [119 kB]
Get:198 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-futile.options all 1.0.1-2 [19.8 kB]
Get:199 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-futile.logger all 1.4.3-3 [102 kB]
Get:200 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-snow all 1:0.4.3-1 [107 kB]
Get:201 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-biocparallel amd64 1.20.0-1 [1074 kB]
Get:202 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-xml amd64 3.98-1.20-2 [1939 kB]
Get:203 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-hms all 0.5.2-1 [104 kB]
Get:204 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-progress all 1.2.2-1 [87.9 kB]
Get:205 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-stringi amd64 1.4.3-1 [710 kB]
Get:206 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-stringr all 1.4.0-1 [192 kB]
Get:207 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-biomart all 2.42.0+dfsg-1 [315 kB]
Get:208 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-biostrings amd64 2.54.0-1 [14.1 MB]
Get:209 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-matrixstats amd64 0.55.0-1 [653 kB]
Get:210 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-lattice amd64 0.20-38-1 [1111 kB]
Get:211 http://ftpmaster.internal/ubuntu focal/universe amd64 r-cran-matrix amd64 1.2-17-2 [3444 kB]
Get:212 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-delayedarray amd64 0.12.0+dfsg-1 [1658 kB]
Get:213 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-summarizedexperiment all 1.16.0+dfsg-1 [1892 kB]
Get:214 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-rsamtools amd64 2.2.1-1 [3724 kB]
Get:215 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-genomicalignments amd64 1.22.1-1 [2123 kB]
Get:216 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-rtracklayer amd64 1.46.0-1 [2608 kB]
Get:217 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-genomicfeatures all 1.38.0+dfsg-1 [1561 kB]
Get:218 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 r-bioc-protgenerics all 1.18.0-1 [84.6 kB]
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Setting up r-cran-tibble (2.1.3-1) ...
Setting up r-bioc-annotationfilter (1.10.0+dfsg-1) ...
Setting up r-cran-hms (0.5.2-1) ...
Setting up r-cran-blob (1.2.0-1) ...
Setting up r-bioc-rsamtools (2.2.1-1) ...
Setting up r-cran-dplyr (0.8.3-1) ...
Setting up r-cran-dbplyr (1.4.2-1) ...
Setting up r-cran-rsqlite (2.1.2-1) ...
Setting up r-cran-progress (1.2.2-1) ...
Setting up r-bioc-summarizedexperiment (1.16.0+dfsg-1) ...
Setting up r-bioc-biocfilecache (1.10.2+dfsg-1) ...
Setting up r-bioc-annotationdbi (1.48.0-1) ...
Setting up r-bioc-biomart (2.42.0+dfsg-1) ...
Setting up r-bioc-genomicalignments (1.22.1-1) ...
Setting up r-bioc-rtracklayer (1.46.0-1) ...
Setting up r-bioc-genomicfeatures (1.38.0+dfsg-1) ...
Setting up debhelper (12.7.1ubuntu1) ...
Setting up dh-autoreconf (19) ...
Setting up dh-r (20190917) ...
Setting up sbuild-build-depends-r-bioc-ensembldb-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.30-0ubuntu2) ...
Processing triggers for systemd (243-3ubuntu1) ...

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.4.0-169-generic amd64 (x86_64)
Toolchain package versions: binutils_2.33.1-1ubuntu1 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-20ubuntu1 gcc-9_9.2.1-20ubuntu1 libc6-dev_2.30-0ubuntu2 libstdc++-9-dev_9.2.1-20ubuntu1 libstdc++6_9.2.1-20ubuntu1 linux-libc-dev_5.3.0-24.26
Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.4 autoconf_2.69-11ubuntu1 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11ubuntu1 base-passwd_3.5.46 bash_5.0-5ubuntu1 binutils_2.33.1-1ubuntu1 binutils-common_2.33.1-1ubuntu1 binutils-x86-64-linux-gnu_2.33.1-1ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu3 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3ubuntu2 cpp_4:9.2.1-3.1ubuntu1 cpp-9_9.2.1-20ubuntu1 dash_0.5.10.2-6 dctrl-tools_2.24-3 debconf_1.5.73 debhelper_12.7.1ubuntu1 debianutils_4.9 dh-autoreconf_19 dh-r_20190917 dh-strip-nondeterminism_1.6.3-1 diffutils_1:3.7-3 dpkg_1.19.7ubuntu2 dpkg-dev_1.19.7ubuntu2 dwz_0.13-2 e2fsprogs_1.45.3-4ubuntu2 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu3 file_1:5.37-6 findutils_4.6.0+git+20190209-2ubuntu1 fontconfig_2.13.1-2ubuntu2 fontconfig-config_2.13.1-2ubuntu2 fonts-dejavu-core_2.37-1 g++_4:9.2.1-3.1ubuntu1 g++-9_9.2.1-20ubuntu1 gcc_4:9.2.1-3.1ubuntu1 gcc-9_9.2.1-20ubuntu1 gcc-9-base_9.2.1-20ubuntu1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:9.2.1-3.1ubuntu1 gfortran-9_9.2.1-20ubuntu1 gpg_2.2.17-3ubuntu1 gpg-agent_2.2.17-3ubuntu1 gpgconf_2.2.17-3ubuntu1 gpgv_2.2.17-3ubuntu1 grep_3.3-1build1 groff-base_1.22.4-3 gzip_1.10-0ubuntu3 hostname_3.23 icu-devtools_63.2-2 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libapparmor1_2.13.3-5ubuntu5 libapt-pkg5.90_1.9.4 libarchive-zip-perl_1.67-1 libargon2-1_0~20171227-0.2 libasan5_9.2.1-20ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-3build1 libassuan0_2.5.3-7ubuntu1 libatomic1_9.2.1-20ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu3 libaudit1_1:2.8.5-2ubuntu3 libbinutils_2.33.1-1ubuntu1 libblas-dev_3.9.0-1 libblas3_3.9.0-1 libblkid1_2.34-0.1ubuntu3 libbrotli1_1.0.7-5 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libbz2-dev_1.0.8-2 libc-bin_2.30-0ubuntu2 libc-dev-bin_2.30-0ubuntu2 libc6_2.30-0ubuntu2 libc6-dev_2.30-0ubuntu2 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.1 libcap2_1:2.27-1 libcc1-0_9.2.1-20ubuntu1 libcom-err2_1.45.3-4ubuntu2 libcroco3_0.6.13-1 libcryptsetup12_2:2.2.2-1ubuntu1 libcurl4_7.66.0-1ubuntu1 libdatrie1_0.2.12-3 libdb5.3_5.3.28+dfsg1-0.6ubuntu1 libdebconfclient0_0.250ubuntu1 libdebhelper-perl_12.7.1ubuntu1 libdevmapper1.02.1_2:1.02.155-2ubuntu7 libdpkg-perl_1.19.7ubuntu2 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.3-4ubuntu2 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu3 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.6.3-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-2ubuntu2 libfreetype6_2.10.1-2 libfribidi0_1.0.7-1.1 libgcc-9-dev_9.2.1-20ubuntu1 libgcc1_1:9.2.1-20ubuntu1 libgcrypt20_1.8.5-3ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-9-dev_9.2.1-20ubuntu1 libgfortran5_9.2.1-20ubuntu1 libglib2.0-0_2.63.1-2 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.10-5 libgomp1_9.2.1-20ubuntu1 libgpg-error0_1.36-7 libgraphite2-3_1.3.13-11 libgssapi-krb5-2_1.17-6 libgssapi3-heimdal_7.5.0+dfsg-3build1 libharfbuzz0b_2.6.4-1 libhcrypto4-heimdal_7.5.0+dfsg-3build1 libheimbase1-heimdal_7.5.0+dfsg-3build1 libheimntlm0-heimdal_7.5.0+dfsg-3build1 libhogweed4_3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhx509-5-heimdal_7.5.0+dfsg-3build1 libice6_2:1.0.10-0ubuntu1 libicu-dev_63.2-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libip4tc2_1.8.3-2ubuntu5 libisl21_0.21-2 libitm1_9.2.1-20ubuntu1 libjbig0_2.1-3.1build1 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_2.0.3-0ubuntu1 libjpeg-turbo8-dev_2.0.3-0ubuntu1 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libjson-c4_0.13.1+dfsg-6 libk5crypto3_1.17-6 libkeyutils1_1.6-6ubuntu1 libkmod2_26-3ubuntu1 libkrb5-26-heimdal_7.5.0+dfsg-3build1 libkrb5-3_1.17-6 libkrb5support0_1.17-6 liblapack-dev_3.9.0-1 liblapack3_3.9.0-1 libldap-2.4-2_2.4.48+dfsg-1ubuntu3 libldap-common_2.4.48+dfsg-1ubuntu3 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_9.2.1-20ubuntu1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1ubuntu3 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses-dev_6.1+20191019-1ubuntu1 libncurses5-dev_6.1+20191019-1ubuntu1 libncurses6_6.1+20191019-1ubuntu1 libncursesw6_6.1+20191019-1ubuntu1 libnettle6_3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1 libnpth0_1.6-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5ubuntu1 libpam-modules-bin_1.3.1-5ubuntu1 libpam-runtime_1.3.1-5ubuntu1 libpam0g_1.3.1-5ubuntu1 libpango-1.0-0_1.44.7-1 libpangocairo-1.0-0_1.44.7-1 libpangoft2-1.0-0_1.44.7-1 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre16-3_2:8.39-12 libpcre2-16-0_10.32-5 libpcre2-32-0_10.32-5 libpcre2-8-0_10.32-5 libpcre2-dev_10.32-5 libpcre2-posix0_10.32-5 libpcre3_2:8.39-12 libpcre3-dev_2:8.39-12 libpcre32-3_2:8.39-12 libpcrecpp0v5_2:8.39-12 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-9 libpipeline1_1.5.1-2 libpixman-1-0_0.38.4-0ubuntu1 libpng-dev_1.6.37-1 libpng16-16_1.6.37-1 libprocps7_2:3.3.15-2ubuntu3 libpsl5_0.20.2-2 libquadmath0_9.2.1-20ubuntu1 libreadline-dev_8.0-3 libreadline8_8.0-3 libroken18-heimdal_7.5.0+dfsg-3build1 librtmp1_2.4+20151223.gitfa8646d.1-2build1 libsasl2-2_2.1.27+dfsg-1build3 libsasl2-modules-db_2.1.27+dfsg-1build3 libseccomp2_2.4.2-2ubuntu1 libselinux1_2.9-3 libsemanage-common_2.9-3build1 libsemanage1_2.9-3build1 libsepol1_2.9-2 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1ubuntu3 libsqlite3-0_3.30.1-1 libss2_1.45.3-4ubuntu2 libssh-4_0.9.0-1ubuntu1 libssl1.1_1.1.1c-1ubuntu4 libstdc++-9-dev_9.2.1-20ubuntu1 libstdc++6_9.2.1-20ubuntu1 libsub-override-perl_0.09-2 libswitch-perl_2.17-2 libsystemd0_243-3ubuntu1 libtasn1-6_4.14-3 libtcl8.6_8.6.10+dfsg-1 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-1 libtinfo6_6.1+20191019-1ubuntu1 libtk8.6_8.6.10-1 libtool_2.4.6-11 libtsan0_9.2.1-20ubuntu1 libubsan1_9.2.1-20ubuntu1 libuchardet0_0.0.6-3 libudev1_243-3ubuntu1 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu3 libwebp6_0.6.1-2 libwind0-heimdal_7.5.0+dfsg-3build1 libx11-6_2:1.6.8-1 libx11-data_2:1.6.8-1 libxau6_1:1.0.9-0ubuntu1 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.3-0ubuntu1 libxext6_2:1.3.4-0ubuntu1 libxft2_2.3.3-0ubuntu1 libxml2_2.9.4+dfsg1-8ubuntu1 libxmuu1_2:1.1.3-0ubuntu1 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.1.5-1 libzstd1_1.4.4+dfsg-1 linux-libc-dev_5.3.0-24.26 littler_0.3.9-1 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu4 logsave_1.45.3-4ubuntu2 lsb-base_11.1.0ubuntu1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-1 mawk_1.3.3-17ubuntu3 mount_2.34-0.1ubuntu3 ncurses-base_6.1+20191019-1ubuntu1 ncurses-bin_6.1+20191019-1ubuntu1 openssl_1.1.1c-1ubuntu4 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu4 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkg-config_0.29.1-0ubuntu3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu3 r-base-core_3.6.1-7 r-base-dev_3.6.1-7 r-bioc-annotationdbi_1.48.0-1 r-bioc-annotationfilter_1.10.0+dfsg-1 r-bioc-biobase_2.46.0-1 r-bioc-biocfilecache_1.10.2+dfsg-1 r-bioc-biocgenerics_0.32.0-1 r-bioc-biocparallel_1.20.0-1 r-bioc-biomart_2.42.0+dfsg-1 r-bioc-biostrings_2.54.0-1 r-bioc-delayedarray_0.12.0+dfsg-1 r-bioc-genomeinfodb_1.22.0-1 r-bioc-genomeinfodbdata_1.2.2-1 r-bioc-genomicalignments_1.22.1-1 r-bioc-genomicfeatures_1.38.0+dfsg-1 r-bioc-genomicranges_1.38.0+dfsg-1 r-bioc-iranges_2.20.1-1 r-bioc-protgenerics_1.18.0-1 r-bioc-rsamtools_2.2.1-1 r-bioc-rtracklayer_1.46.0-1 r-bioc-s4vectors_0.24.0-1 r-bioc-summarizedexperiment_1.16.0+dfsg-1 r-bioc-xvector_0.26.0-1 r-bioc-zlibbioc_1.32.0+dfsg-1 r-cran-askpass_1.1-1 r-cran-assertthat_0.2.1-1 r-cran-backports_1.1.5-1 r-cran-bit_1.1-14-1build1 r-cran-bit64_0.9-7-3 r-cran-bitops_1.0-6-4 r-cran-blob_1.2.0-1 r-cran-cli_1.1.0-1 r-cran-crayon_1.3.4-4ubuntu1 r-cran-curl_4.2+dfsg-1 r-cran-dbi_1.0.0-2 r-cran-dbplyr_1.4.2-1 r-cran-digest_0.6.23-1 r-cran-dplyr_0.8.3-1 r-cran-ellipsis_0.3.0-1 r-cran-fansi_0.4.0-1 r-cran-formatr_1.7-1 r-cran-futile.logger_1.4.3-3 r-cran-futile.options_1.0.1-2 r-cran-glue_1.3.1-1 r-cran-hms_0.5.2-1 r-cran-httr_1.4.1-1 r-cran-jsonlite_1.6+dfsg-1 r-cran-lambda.r_1.2.4-1 r-cran-lattice_0.20-38-1 r-cran-lazyeval_0.2.2-1 r-cran-littler_0.3.9-1 r-cran-magrittr_1.5-5 r-cran-matrix_1.2-17-2 r-cran-matrixstats_0.55.0-1 r-cran-memoise_1.1.0-2 r-cran-mime_0.7-1 r-cran-openssl_1.2.2+dfsg-1ubuntu1 r-cran-pillar_1.4.2-1 r-cran-pkgconfig_2.0.3-1 r-cran-pkgkitten_0.1.5-1 r-cran-prettyunits_1.0.2-3 r-cran-progress_1.2.2-1 r-cran-purrr_0.3.3-1 r-cran-r6_2.4.1-1 r-cran-rappdirs_0.3.1-1build1 r-cran-rcpp_1.0.3-1 r-cran-rcurl_1.95-4.12-1 r-cran-rlang_0.4.1-1 r-cran-rsqlite_2.1.2-1 r-cran-snow_1:0.4.3-1 r-cran-stringi_1.4.3-1 r-cran-stringr_1.4.0-1 r-cran-sys_3.3-1 r-cran-tibble_2.1.3-1 r-cran-tidyselect_0.2.5-1 r-cran-utf8_1.1.4-1build1 r-cran-vctrs_0.2.0-1 r-cran-xml_3.98-1.20-2 r-cran-zeallot_0.1.0-2 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-ensembldb-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_243-3ubuntu1 systemd-sysv_243-3ubuntu1 sysvinit-utils_2.96-1ubuntu1 tar_1.30+dfsg-6 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 unzip_6.0-25ubuntu1 util-linux_2.34-0.1ubuntu3 x11-common_1:7.7+19ubuntu12 xauth_1:1.1-0ubuntu1 xdg-utils_1.1.3-1ubuntu2 xz-utils_5.2.4-1 zip_3.0-11build1 zlib1g_1:1.2.11.dfsg-1ubuntu3 zlib1g-dev_1:1.2.11.dfsg-1ubuntu3

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: Signature made Tue Nov 26 14:10:54 2019 UTC
gpgv:                using RSA key 84C1977A89E7EFED3E5CA62E2FD8BEDAC020EED1
gpgv:                issuer "moeller@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-bioc-ensembldb_2.10.2+dfsg-1.dsc
dpkg-source: info: extracting r-bioc-ensembldb in r-bioc-ensembldb-2.10.2+dfsg
dpkg-source: info: unpacking r-bioc-ensembldb_2.10.2+dfsg.orig.tar.xz
dpkg-source: info: unpacking r-bioc-ensembldb_2.10.2+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying add_shebang_line_to_perl_script.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=C.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18166610
SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18166610
SCHROOT_COMMAND=env
SCHROOT_GID=2501
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=build-PACKAGEBUILD-18166610
SCHROOT_UID=2001
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=unknown
USER=buildd
V=1

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package r-bioc-ensembldb
dpkg-buildpackage: info: source version 2.10.2+dfsg-1
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
 fakeroot debian/rules clean
dh clean --buildsystem R
   dh_auto_clean -O--buildsystem=R
   dh_autoreconf_clean -O--buildsystem=R
   dh_clean -O--buildsystem=R
 debian/rules build
make: 'build' is up to date.
 fakeroot debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install -O--buildsystem=R
I: R Package: ensembldb Version: 2.10.2
I: Building using R version 3.6.1-7
I: R API version: r-api-3.5
I: Using built-time from d/changelog: Tue, 26 Nov 2019 15:08:49 +0100
	mkdir -p /<<BUILDDIR>>/r-bioc-ensembldb-2.10.2\+dfsg/debian/r-bioc-ensembldb/usr/lib/R/site-library
	R CMD INSTALL -l /<<BUILDDIR>>/r-bioc-ensembldb-2.10.2\+dfsg/debian/r-bioc-ensembldb/usr/lib/R/site-library --clean . "--built-timestamp='Tue, 26 Nov 2019 15:08:49 +0100'"
* installing *source* package ‘ensembldb’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ensembldb)
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 292.
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 293.
Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 296.
I: Using r-bioc-biocgenerics for Depends:BiocGenerics (>= 0.15.10)
I: Using r-bioc-genomicranges for Depends:GenomicRanges (>= 1.31.18)
I: Using r-bioc-genomicfeatures for Depends:GenomicFeatures (>= 1.29.10)
I: Using r-bioc-annotationfilter for Depends:AnnotationFilter (>= 1.5.2)
W: Cannot find a debian package for Suggests:BiocStyle
I: Using r-cran-knitr for Suggests:knitr
W: Cannot find a debian package for Suggests:EnsDb.Hsapiens.v86 (>= 0.99.8)
I: Using r-cran-testthat for Suggests:testthat
W: Cannot find a debian package for Suggests:BSgenome.Hsapiens.NCBI.GRCh38
W: Cannot find a debian package for Suggests:ggbio (>= 1.24.0)
I: Using r-bioc-gviz for Suggests:Gviz (>= 1.20.0)
I: Using r-cran-magrittr for Suggests:magrittr
I: Using r-bioc-annotationhub for Suggests:AnnotationHub
I: Using r-cran-rsqlite for Imports:RSQLite (>= 1.1)
I: Using r-cran-dbi for Imports:DBI
I: Using r-bioc-biobase for Imports:Biobase
I: Using r-bioc-genomeinfodb for Imports:GenomeInfoDb
I: Using r-bioc-annotationdbi for Imports:AnnotationDbi (>= 1.31.19)
I: Using r-bioc-rtracklayer for Imports:rtracklayer
I: Using r-bioc-s4vectors for Imports:S4Vectors (>= 0.23.10)
I: Using r-bioc-rsamtools for Imports:Rsamtools
I: Using r-bioc-iranges for Imports:IRanges (>= 2.13.24)
I: Using r-bioc-protgenerics for Imports:ProtGenerics
I: Using r-bioc-biostrings for Imports:Biostrings (>= 2.47.9)
I: Using r-cran-curl for Imports:curl
I: BioConductor API version: r-api-bioc-3.10
   dh_installdocs -O--buildsystem=R
   dh_installchangelogs -O--buildsystem=R
   dh_installinit -O--buildsystem=R
   dh_installsystemduser -O--buildsystem=R
   dh_perl -O--buildsystem=R
   dh_link -O--buildsystem=R
   dh_strip_nondeterminism -O--buildsystem=R
   dh_compress -O--buildsystem=R
   debian/rules override_dh_fixperms
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| Changes                                                                      |
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r-bioc-ensembldb_2.10.2+dfsg-1_amd64.changes:
---------------------------------------------

Format: 1.8
Date: Tue, 26 Nov 2019 15:08:49 +0100
Source: r-bioc-ensembldb
Binary: r-bioc-ensembldb
Architecture: all
Version: 2.10.2+dfsg-1
Distribution: focal-proposed
Urgency: medium
Maintainer: Launchpad Build Daemon <buildd@lcy01-amd64-015.buildd>
Changed-By: Steffen Moeller <moeller@debian.org>
Description:
 r-bioc-ensembldb - GNU R utilities to create and use an Ensembl based annotation dat
Changes:
 r-bioc-ensembldb (2.10.2+dfsg-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream version
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Checksums-Sha256:
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Files:
 dbc4500d7ae1fb8541dbe4c632e2dd00 1503920 gnu-r optional r-bioc-ensembldb_2.10.2+dfsg-1_all.deb
 9caf2ca33a7107ce31ff151080f79f6c 10959 gnu-r optional r-bioc-ensembldb_2.10.2+dfsg-1_amd64.buildinfo

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| Package contents                                                             |
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r-bioc-ensembldb_2.10.2+dfsg-1_all.deb
--------------------------------------

 new debian package, version 2.0.
 size 1503920 bytes: control archive=3320 bytes.
    1578 bytes,    21 lines      control              
    7113 bytes,    78 lines      md5sums              
 Package: r-bioc-ensembldb
 Version: 2.10.2+dfsg-1
 Architecture: all
 Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
 Original-Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
 Installed-Size: 2342
 Depends: r-base-core (>= 3.6.1-7), r-api-3.5, r-api-bioc-3.10, r-bioc-biocgenerics (>= 0.15.10), r-bioc-genomicranges (>= 1.31.18), r-bioc-genomicfeatures (>= 1.29.10), r-bioc-annotationfilter (>= 1.5.2), r-cran-rsqlite (>= 1.1), r-cran-dbi, r-bioc-biobase, r-bioc-genomeinfodb, r-bioc-annotationdbi (>= 1.31.19), r-bioc-rtracklayer, r-bioc-s4vectors (>= 0.23.10), r-bioc-rsamtools, r-bioc-iranges (>= 2.13.24), r-bioc-protgenerics, r-bioc-biostrings (>= 2.47.9), r-cran-curl
 Suggests: r-cran-knitr, r-cran-testthat, r-bioc-gviz (>= 1.20.0), r-cran-magrittr, r-bioc-annotationhub
 Section: gnu-r
 Priority: optional
 Homepage: https://bioconductor.org/packages/ensembldb/
 Description: GNU R utilities to create and use an Ensembl based annotation database
  The package provides functions to create and use transcript centric
  annotation databases/packages. The annotation for the databases are
  directly fetched from Ensembl using their Perl API. The functionality
  and data is similar to that of the TxDb packages from the
  GenomicFeatures package, but, in addition to retrieve all
  gene/transcript models and annotations from the database, the ensembldb
  package provides also a filter framework allowing to retrieve
  annotations for specific entries like genes encoded on a chromosome
  region or transcript models of lincRNA genes.

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| Cleanup                                                                      |
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| Summary                                                                      |
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Build Architecture: amd64
Build-Space: 6900
Build-Time: 68
Distribution: focal-proposed
Host Architecture: amd64
Install-Time: 50
Job: r-bioc-ensembldb_2.10.2+dfsg-1.dsc
Machine Architecture: amd64
Package: r-bioc-ensembldb
Package-Time: 119
Source-Version: 2.10.2+dfsg-1
Space: 6900
Status: successful
Version: 2.10.2+dfsg-1
--------------------------------------------------------------------------------
Finished at 20191126-2314
Build needed 00:01:59, 6900k disc space
RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18166610
Scanning for processes to kill in build PACKAGEBUILD-18166610