https://launchpad.net/ubuntu/+source/r-bioc-fmcsr/1.32.0+dfsg-1/+build/20236393 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-080 4.15.0-121-generic #123-Ubuntu SMP Mon Oct 5 16:19:23 UTC 2020 aarch64 Buildd toolchain package versions: launchpad-buildd_193~468~ubuntu18.04.1 python3-lpbuildd_193~468~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 1 Nov 23:15:19 ntpdate[1784]: adjust time server 10.211.37.1 offset 0.000995 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20236393 --image-type chroot /home/buildd/filecache-default/6663ab897c1b9684e4da3138ea2f806b3d40e7b1 Creating target for build PACKAGEBUILD-20236393 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20236393 Starting target for build PACKAGEBUILD-20236393 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20236393 'deb http://ftpmaster.internal/ubuntu hirsute main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-security main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-updates main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-20236393 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20236393 Updating target for build PACKAGEBUILD-20236393 Get:1 http://ftpmaster.internal/ubuntu hirsute InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute-security InRelease [88.4 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute-updates InRelease [88.4 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed InRelease [117 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main armhf Packages [1338 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main Translation-en [508 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/universe armhf Packages [12.3 MB] Get:8 http://ftpmaster.internal/ubuntu hirsute/universe Translation-en [5324 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf Packages [140 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main Translation-en [68.5 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf Packages [1236 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/universe Translation-en [475 kB] Fetched 21.9 MB in 9s (2563 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt base-files base-passwd binutils binutils-arm-linux-gnueabihf binutils-common cpp-10 fakeroot g++-10 gcc-10 gcc-10-base libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libaudit-common libaudit1 libbinutils libc-bin libc-dev-bin libc6 libc6-dev libcap2 libcc1-0 libcrypt-dev libcrypt1 libctf-nobfd0 libctf0 libdebconfclient0 libfakeroot libgcc-10-dev libgcc-s1 libgomp1 libmpc3 libncurses6 libncursesw6 libnpth0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libstdc++-10-dev libstdc++6 libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libubsan1 libudev1 linux-libc-dev ncurses-base ncurses-bin systemd systemd-sysv systemd-timesyncd sysvinit-utils tzdata 58 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 203 MB of archives. After this operation, 596 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libcrypt-dev armhf 1:4.4.17-1ubuntu1 [113 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libcrypt1 armhf 1:4.4.17-1ubuntu1 [86.7 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libc6-dev armhf 2.32-0ubuntu4 [1581 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libc-dev-bin armhf 2.32-0ubuntu4 [29.6 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf linux-libc-dev armhf 5.8.0-26.27 [1135 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtirpc-common all 1.2.6-3 [7444 B] Get:7 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtirpc-dev armhf 1.2.6-3 [175 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtirpc3 armhf 1.2.6-3 [66.1 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libcc1-0 armhf 10.2.0-16ubuntu1 [34.7 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf gcc-10-base armhf 10.2.0-16ubuntu1 [19.6 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libgcc-s1 armhf 10.2.0-16ubuntu1 [36.3 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libgomp1 armhf 10.2.0-16ubuntu1 [87.2 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libatomic1 armhf 10.2.0-16ubuntu1 [7240 B] Get:14 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libasan6 armhf 10.2.0-16ubuntu1 [328 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libubsan1 armhf 10.2.0-16ubuntu1 [122 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf g++-10 armhf 10.2.0-16ubuntu1 [63.0 MB] Get:17 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libstdc++-10-dev armhf 10.2.0-16ubuntu1 [1812 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libgcc-10-dev armhf 10.2.0-16ubuntu1 [716 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf gcc-10 armhf 10.2.0-16ubuntu1 [63.7 MB] Get:20 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf cpp-10 armhf 10.2.0-16ubuntu1 [57.0 MB] Get:21 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libstdc++6 armhf 10.2.0-16ubuntu1 [441 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libmpc3 armhf 1.2.0-1 [36.1 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libctf-nobfd0 armhf 2.35.1-2ubuntu1 [38.7 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libctf0 armhf 2.35.1-2ubuntu1 [37.6 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libbinutils armhf 2.35.1-2ubuntu1 [322 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf binutils-common armhf 2.35.1-2ubuntu1 [212 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf binutils armhf 2.35.1-2ubuntu1 [3368 B] Get:28 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf binutils-arm-linux-gnueabihf armhf 2.35.1-2ubuntu1 [2060 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libc6 armhf 2.32-0ubuntu4 [2120 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main armhf base-files armhf 11ubuntu16 [60.2 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libncursesw6 armhf 6.2+20200918-1 [106 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libncurses6 armhf 6.2+20200918-1 [79.9 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtinfo6 armhf 6.2+20200918-1 [74.2 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf ncurses-bin armhf 6.2+20200918-1 [165 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libdebconfclient0 armhf 0.254ubuntu1 [5648 B] Get:36 http://ftpmaster.internal/ubuntu hirsute/main armhf base-passwd armhf 3.5.48 [46.0 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libc-bin armhf 2.32-0ubuntu4 [492 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf ncurses-base all 6.2+20200918-1 [18.7 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main armhf sysvinit-utils armhf 2.96-5ubuntu1 [19.2 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf systemd-timesyncd armhf 246.6-2ubuntu1 [27.8 kB] Get:41 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf systemd-sysv armhf 246.6-2ubuntu1 [10.3 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute/main armhf libapparmor1 armhf 3.0.0-0ubuntu2 [31.1 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute/main armhf libaudit-common all 1:2.8.5-3ubuntu2 [4092 B] Get:44 http://ftpmaster.internal/ubuntu hirsute/main armhf libaudit1 armhf 1:2.8.5-3ubuntu2 [36.2 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libcap2 armhf 1:2.44-1 [14.7 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libseccomp2 armhf 2.4.3-1ubuntu5 [32.6 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf systemd armhf 246.6-2ubuntu1 [3971 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libsystemd0 armhf 246.6-2ubuntu1 [247 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libudev1 armhf 246.6-2ubuntu1 [59.9 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libapt-pkg6.0 armhf 2.1.11 [773 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf apt armhf 2.1.11 [1254 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main armhf libselinux1 armhf 3.1-2build1 [60.9 kB] Get:53 http://ftpmaster.internal/ubuntu hirsute/main armhf libsemanage-common all 3.1-1build1 [10.1 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main armhf libsemanage1 armhf 3.1-1build1 [75.7 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute/main armhf tzdata all 2020d-1ubuntu1 [293 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libfakeroot armhf 1.25.3-1 [23.2 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf fakeroot armhf 1.25.3-1 [60.9 kB] Get:58 http://ftpmaster.internal/ubuntu hirsute/main armhf libnpth0 armhf 1.6-3 [6980 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 203 MB in 1min 27s (2330 kB/s) (Reading database ... 12723 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.17-1ubuntu1_armhf.deb ... Unpacking libcrypt-dev:armhf (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Preparing to unpack .../libcrypt1_1%3a4.4.17-1ubuntu1_armhf.deb ... Unpacking libcrypt1:armhf (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Setting up libcrypt1:armhf (1:4.4.17-1ubuntu1) ... (Reading database ... 12723 files and directories currently installed.) Preparing to unpack .../0-libc6-dev_2.32-0ubuntu4_armhf.deb ... Unpacking libc6-dev:armhf (2.32-0ubuntu4) over (2.32-0ubuntu3) ... Preparing to unpack .../1-libc-dev-bin_2.32-0ubuntu4_armhf.deb ... Unpacking libc-dev-bin (2.32-0ubuntu4) over (2.32-0ubuntu3) ... Preparing to unpack .../2-linux-libc-dev_5.8.0-26.27_armhf.deb ... Unpacking linux-libc-dev:armhf (5.8.0-26.27) over (5.8.0-25.26) ... Preparing to unpack .../3-libtirpc-common_1.2.6-3_all.deb ... Unpacking libtirpc-common (1.2.6-3) over (1.2.6-1build1) ... Preparing to unpack .../4-libtirpc-dev_1.2.6-3_armhf.deb ... 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RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-20236393 armhf hirsute-proposed -c chroot:build-PACKAGEBUILD-20236393 --arch=armhf --dist=hirsute-proposed --nolog r-bioc-fmcsr_1.32.0+dfsg-1.dsc Initiating build PACKAGEBUILD-20236393 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-121-generic #123-Ubuntu SMP Mon Oct 5 16:19:23 UTC 2020 armv7l sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-arm64-080.buildd +==============================================================================+ | r-bioc-fmcsr 1.32.0+dfsg-1 (armhf) Sun, 01 Nov 2020 23:18:06 +0000 | +==============================================================================+ Package: r-bioc-fmcsr Version: 1.32.0+dfsg-1 Source Version: 1.32.0+dfsg-1 Distribution: hirsute-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-20236393/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- r-bioc-fmcsr_1.32.0+dfsg-1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/r-bioc-fmcsr-PKGue0/r-bioc-fmcsr-1.32.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/r-bioc-fmcsr-PKGue0' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-wv3d0u/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-wv3d0u/apt_archive ./ InRelease Get:2 copy:/<>/resolver-wv3d0u/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-wv3d0u/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-wv3d0u/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-wv3d0u/apt_archive ./ Packages [430 B] Fetched 1736 B in 0s (44.1 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-wv3d0u/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (62.7 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-chemminer, r-cran-runit, r-bioc-biocgenerics Filtered Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-chemminer, r-cran-runit, r-bioc-biocgenerics dpkg-deb: building package 'sbuild-build-depends-r-bioc-fmcsr-dummy' in '/<>/resolver-wv3d0u/apt_archive/sbuild-build-depends-r-bioc-fmcsr-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-bioc-fmcsr-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-wv3d0u/apt_archive ./ InRelease Get:2 copy:/<>/resolver-wv3d0u/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-wv3d0u/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-wv3d0u/apt_archive ./ Sources [531 B] Get:5 copy:/<>/resolver-wv3d0u/apt_archive ./ Packages [613 B] Fetched 2107 B in 0s (60.5 kB/s) Reading package lists... Reading package lists... Install r-bioc-fmcsr build dependencies (apt-based resolver) ------------------------------------------------------------ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-glyphicons-halflings gettext gettext-base gfortran gfortran-10 groff-base icu-devtools intltool-debian libarchive-zip-perl libasn1-8-heimdal libblas-dev libblas3 libboost-dev libboost1.71-dev libbrotli1 libbsd0 libbz2-dev libcairo-gobject2 libcairo2 libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran-10-dev libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi3-heimdal libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu-dev libicu67 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-es5-shim libjs-jquery libjs-jquery-datatables libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-microplugin.js libjs-sifter.js libkrb5-26-heimdal liblapack-dev liblapack3 libldap-2.4-2 liblzma-dev libmagic-mgc libmagic1 libncurses-dev libncurses5-dev libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5 libreadline-dev libroken18-heimdal librsvg2-2 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh-4 libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtool libuchardet0 libwebp6 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db node-jquery pkg-config po-debconf r-base-core r-base-dev r-bioc-biocgenerics r-bioc-chemminer r-cran-assertthat r-cran-backports r-cran-base64enc r-cran-bh r-cran-bitops r-cran-callr r-cran-cli r-cran-colorspace r-cran-crayon r-cran-crosstalk r-cran-dbi r-cran-desc r-cran-digest r-cran-dt r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-htmltools r-cran-htmlwidgets r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-png r-cran-praise r-cran-prettyunits r-cran-processx r-cran-promises r-cran-ps r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-rjson r-cran-rlang r-cran-rprojroot r-cran-rstudioapi r-cran-rsvg r-cran-runit r-cran-scales r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-yaml shared-mime-info ucf unzip x11-common xauth xdg-utils zip zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc debtags dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-10-multilib gfortran-10-doc libcoarrays-dev groff liblapack-doc libboost-doc libboost1.71-doc libboost-atomic1.71-dev libboost-chrono1.71-dev libboost-container1.71-dev libboost-context1.71-dev libboost-contract1.71-dev libboost-coroutine1.71-dev libboost-date-time1.71-dev libboost-exception1.71-dev libboost-fiber1.71-dev libboost-filesystem1.71-dev libboost-graph1.71-dev libboost-graph-parallel1.71-dev libboost-iostreams1.71-dev libboost-locale1.71-dev libboost-log1.71-dev libboost-math1.71-dev libboost-mpi1.71-dev libboost-mpi-python1.71-dev libboost-numpy1.71-dev libboost-program-options1.71-dev libboost-python1.71-dev libboost-random1.71-dev libboost-regex1.71-dev libboost-serialization1.71-dev libboost-stacktrace1.71-dev libboost-system1.71-dev libboost-test1.71-dev libboost-thread1.71-dev libboost-timer1.71-dev libboost-type-erasure1.71-dev libboost-wave1.71-dev libboost1.71-tools-dev libmpfrc++-dev libntl-dev icu-doc liblzma-doc ncurses-doc readline-doc librsvg2-bin tcl8.6 tk8.6 libtool-doc gcj-jdk m4-doc apparmor less www-browser libmail-box-perl elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo r-bioc-biobase r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-rsqlite r-cran-scatterplot3d r-cran-gplots r-bioc-fmcsr r-cran-snow r-cran-rpostgresql r-bioc-biocstyle r-cran-knitr r-cran-rmarkdown r-cran-biocmanager r-cran-covr r-cran-prettycode r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny r-cran-shinyjs r-cran-dplyr r-cran-jpeg r-cran-viridis r-cran-rmysql r-cran-testit r-cran-unitizer r-cran-hmisc r-cran-maps r-cran-maptools r-cran-multcomp r-cran-rpart r-cran-sf r-cran-svglite r-cran-r.utils r-cran-forcats r-cran-stringr r-cran-cairo r-cran-magick r-cran-httr r-cran-curl r-cran-plyr r-cran-getopt r-cran-bit64 r-cran-inline r-cran-xml r-cran-mockr r-cran-dichromat r-cran-devtools r-cran-usethis r-cran-blob r-cran-hms r-cran-purrr r-cran-tidyr r-cran-zeallot Recommended packages: devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs javascript-common libldap-common libpng-tools publicsuffix librsvg2-common libsasl2-modules libltdl-dev libmail-sendmail-perl r-recommended r-doc-html r-cran-cliapp r-cran-mockery r-cran-knitr r-cran-rmarkdown r-cran-sp r-cran-mapproj r-cran-hexbin r-cran-vdiffr r-cran-quantreg r-cran-markdown r-cran-lubridate r-cran-codetools r-cran-curl r-cran-future r-cran-bit64 r-cran-hms r-cran-xml2 r-cran-data.table r-cran-rsqlite r-cran-dplyr r-cran-mockr r-cran-generics libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-glyphicons-halflings gettext gettext-base gfortran gfortran-10 groff-base icu-devtools intltool-debian libarchive-zip-perl libasn1-8-heimdal libblas-dev libblas3 libboost-dev libboost1.71-dev libbrotli1 libbsd0 libbz2-dev libcairo-gobject2 libcairo2 libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran-10-dev libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi3-heimdal libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu-dev libicu67 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-es5-shim libjs-jquery libjs-jquery-datatables libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-microplugin.js libjs-sifter.js libkrb5-26-heimdal liblapack-dev liblapack3 libldap-2.4-2 liblzma-dev libmagic-mgc libmagic1 libncurses-dev libncurses5-dev libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5 libreadline-dev libroken18-heimdal librsvg2-2 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh-4 libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtool libuchardet0 libwebp6 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db node-jquery pkg-config po-debconf r-base-core r-base-dev r-bioc-biocgenerics r-bioc-chemminer r-cran-assertthat r-cran-backports r-cran-base64enc r-cran-bh r-cran-bitops r-cran-callr r-cran-cli r-cran-colorspace r-cran-crayon r-cran-crosstalk r-cran-dbi r-cran-desc r-cran-digest r-cran-dt r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-htmltools r-cran-htmlwidgets r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-png r-cran-praise r-cran-prettyunits r-cran-processx r-cran-promises r-cran-ps r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-rjson r-cran-rlang r-cran-rprojroot r-cran-rstudioapi r-cran-rsvg r-cran-runit r-cran-scales r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-yaml sbuild-build-depends-r-bioc-fmcsr-dummy shared-mime-info ucf unzip x11-common xauth xdg-utils zip zlib1g-dev 0 upgraded, 220 newly installed, 0 to remove and 0 not upgraded. Need to get 173 MB of archives. After this operation, 628 MB of additional disk space will be used. Get:1 copy:/<>/resolver-wv3d0u/apt_archive ./ sbuild-build-depends-r-bioc-fmcsr-dummy 0.invalid.0 [904 B] Get:2 http://ftpmaster.internal/ubuntu hirsute/main armhf bsdextrautils armhf 2.36-3ubuntu1 [70.6 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute/main armhf groff-base armhf 1.22.4-5 [759 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main armhf libpipeline1 armhf 1.5.3-1 [23.3 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main armhf man-db armhf 2.9.3-2 [1082 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/main armhf libmagic-mgc armhf 1:5.38-5 [218 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main armhf libmagic1 armhf 1:5.38-5 [68.4 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute/main armhf file armhf 1:5.38-5 [22.4 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute/main armhf libbsd0 armhf 0.10.0-1 [49.8 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute/main armhf libelf1 armhf 0.181-1 [39.5 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libexpat1 armhf 2.2.10-1 [55.1 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main armhf libfribidi0 armhf 1.0.8-2 [21.8 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main armhf libglib2.0-0 armhf 2.66.1-2 [1138 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main armhf libicu67 armhf 67.1-4 [8304 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libxml2 armhf 2.9.10+dfsg-6.2 [530 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute/main armhf shared-mime-info armhf 2.0-1 [432 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute/main armhf ucf all 3.0043 [56.1 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute/main armhf gettext-base armhf 0.19.8.1-10build1 [46.0 kB] Get:20 http://ftpmaster.internal/ubuntu hirsute/main armhf libpsl5 armhf 0.21.0-1.1ubuntu1 [51.1 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute/main armhf libxau6 armhf 1:1.0.9-0ubuntu1 [6612 B] Get:22 http://ftpmaster.internal/ubuntu hirsute/main armhf libxdmcp6 armhf 1:1.1.3-0ubuntu1 [9160 B] Get:23 http://ftpmaster.internal/ubuntu hirsute/main armhf libxcb1 armhf 1.14-2 [41.3 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main armhf libx11-data all 2:1.6.12-1 [113 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main armhf libx11-6 armhf 2:1.6.12-1 [511 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute/main armhf libxext6 armhf 2:1.3.4-0ubuntu1 [24.2 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute/main armhf libxmuu1 armhf 2:1.1.3-0ubuntu1 [9028 B] Get:28 http://ftpmaster.internal/ubuntu hirsute/main armhf xauth armhf 1:1.1-0ubuntu1 [21.9 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute/main armhf libsigsegv2 armhf 2.12-2build1 [13.0 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main armhf m4 armhf 1.4.18-4 [187 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main armhf autoconf all 2.69-11.1 [321 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute/main armhf autotools-dev all 20180224.1 [39.6 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute/main armhf automake all 1:1.16.2-4ubuntu1 [548 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute/main armhf autopoint all 0.19.8.1-10build1 [412 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute/main armhf dctrl-tools armhf 2.24-3 [53.8 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute/main armhf libtool all 2.4.6-14 [161 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute/main armhf dh-autoreconf all 19 [16.1 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute/main armhf libdebhelper-perl all 13.2.1ubuntu1 [63.6 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute/main armhf libsub-override-perl all 0.09-2 [9532 B] Get:41 http://ftpmaster.internal/ubuntu hirsute/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute/main armhf dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:43 http://ftpmaster.internal/ubuntu hirsute/main armhf dwz armhf 0.13-5 [153 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute/main armhf libcroco3 armhf 0.6.13-1 [70.5 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute/main armhf gettext armhf 0.19.8.1-10build1 [835 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main armhf intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute/main armhf po-debconf all 1.0.21 [233 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute/main armhf debhelper all 13.2.1ubuntu1 [879 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute/main armhf zip armhf 3.0-11build1 [145 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute/main armhf unzip armhf 6.0-25ubuntu1 [155 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute/main armhf libpaper1 armhf 1.1.28 [12.1 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main armhf libpaper-utils armhf 1.1.28 [7960 B] Get:53 http://ftpmaster.internal/ubuntu hirsute/main armhf xdg-utils all 1.1.3-2ubuntu1 [61.6 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main armhf libblas3 armhf 3.9.0-3ubuntu1 [97.8 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute/main armhf libbrotli1 armhf 1.0.9-2build1 [259 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute/main armhf libfreetype6 armhf 2.10.2+dfsg-3ubuntu1 [287 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute/main armhf fonts-dejavu-core all 2.37-2 [1041 kB] Get:58 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf fontconfig-config all 2.13.1-2ubuntu3.1 [28.7 kB] Get:59 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libfontconfig1 armhf 2.13.1-2ubuntu3.1 [99.2 kB] Get:60 http://ftpmaster.internal/ubuntu hirsute/main armhf libpixman-1-0 armhf 0.38.4-0ubuntu1 [159 kB] Get:61 http://ftpmaster.internal/ubuntu hirsute/main armhf libxcb-render0 armhf 1.14-2 [14.2 kB] Get:62 http://ftpmaster.internal/ubuntu hirsute/main armhf libxcb-shm0 armhf 1.14-2 [5540 B] Get:63 http://ftpmaster.internal/ubuntu hirsute/main armhf libxrender1 armhf 1:0.9.10-1 [15.6 kB] Get:64 http://ftpmaster.internal/ubuntu hirsute/main armhf libcairo2 armhf 1.16.0-4ubuntu1 [503 kB] Get:65 http://ftpmaster.internal/ubuntu hirsute/main armhf libroken18-heimdal armhf 7.7.0+dfsg-2 [34.5 kB] Get:66 http://ftpmaster.internal/ubuntu hirsute/main armhf libasn1-8-heimdal armhf 7.7.0+dfsg-2 [140 kB] Get:67 http://ftpmaster.internal/ubuntu hirsute/main armhf libheimbase1-heimdal armhf 7.7.0+dfsg-2 [24.3 kB] Get:68 http://ftpmaster.internal/ubuntu hirsute/main armhf libhcrypto4-heimdal armhf 7.7.0+dfsg-2 [78.5 kB] Get:69 http://ftpmaster.internal/ubuntu hirsute/main armhf libwind0-heimdal armhf 7.7.0+dfsg-2 [47.2 kB] Get:70 http://ftpmaster.internal/ubuntu hirsute/main armhf libhx509-5-heimdal armhf 7.7.0+dfsg-2 [88.8 kB] Get:71 http://ftpmaster.internal/ubuntu hirsute/main armhf libkrb5-26-heimdal armhf 7.7.0+dfsg-2 [170 kB] Get:72 http://ftpmaster.internal/ubuntu hirsute/main armhf libheimntlm0-heimdal armhf 7.7.0+dfsg-2 [13.2 kB] Get:73 http://ftpmaster.internal/ubuntu hirsute/main armhf libgssapi3-heimdal armhf 7.7.0+dfsg-2 [79.9 kB] Get:74 http://ftpmaster.internal/ubuntu hirsute/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2ubuntu1 [13.2 kB] Get:75 http://ftpmaster.internal/ubuntu hirsute/main armhf libsasl2-2 armhf 2.1.27+dfsg-2ubuntu1 [42.4 kB] Get:76 http://ftpmaster.internal/ubuntu hirsute/main armhf libldap-2.4-2 armhf 2.4.53+dfsg-1ubuntu1 [135 kB] Get:77 http://ftpmaster.internal/ubuntu hirsute/main armhf libnghttp2-14 armhf 1.41.0-3 [57.8 kB] Get:78 http://ftpmaster.internal/ubuntu hirsute/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build2 [48.9 kB] Get:79 http://ftpmaster.internal/ubuntu hirsute/main armhf libssh-4 armhf 0.9.4-1ubuntu3 [147 kB] Get:80 http://ftpmaster.internal/ubuntu hirsute/main armhf libcurl4 armhf 7.68.0-1ubuntu4 [202 kB] Get:81 http://ftpmaster.internal/ubuntu hirsute/main armhf libjpeg-turbo8 armhf 2.0.3-0ubuntu2 [90.4 kB] Get:82 http://ftpmaster.internal/ubuntu hirsute/main armhf libjpeg8 armhf 8c-2ubuntu8 [2202 B] Get:83 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libgfortran5 armhf 10.2.0-16ubuntu1 [250 kB] Get:84 http://ftpmaster.internal/ubuntu hirsute/main armhf liblapack3 armhf 3.9.0-3ubuntu1 [1637 kB] Get:85 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf fontconfig armhf 2.13.1-2ubuntu3.1 [170 kB] Get:86 http://ftpmaster.internal/ubuntu hirsute/main armhf libgraphite2-3 armhf 1.3.14-1 [62.7 kB] Get:87 http://ftpmaster.internal/ubuntu hirsute/main armhf libharfbuzz0b armhf 2.6.4-1ubuntu5 [288 kB] Get:88 http://ftpmaster.internal/ubuntu hirsute/main armhf libthai-data all 0.1.28-3 [134 kB] Get:89 http://ftpmaster.internal/ubuntu hirsute/main armhf libdatrie1 armhf 0.2.12-3 [15.2 kB] Get:90 http://ftpmaster.internal/ubuntu hirsute/main armhf libthai0 armhf 0.1.28-3 [14.7 kB] Get:91 http://ftpmaster.internal/ubuntu hirsute/main armhf libpango-1.0-0 armhf 1.46.2-1 [150 kB] Get:92 http://ftpmaster.internal/ubuntu hirsute/main armhf libpangoft2-1.0-0 armhf 1.46.2-1 [30.0 kB] Get:93 http://ftpmaster.internal/ubuntu hirsute/main armhf libpangocairo-1.0-0 armhf 1.46.2-1 [21.1 kB] Get:94 http://ftpmaster.internal/ubuntu hirsute/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [798 kB] Get:95 http://ftpmaster.internal/ubuntu hirsute/main armhf libjbig0 armhf 2.1-3.1build1 [23.9 kB] Get:96 http://ftpmaster.internal/ubuntu hirsute/main armhf libwebp6 armhf 0.6.1-2 [152 kB] Get:97 http://ftpmaster.internal/ubuntu hirsute/main armhf libtiff5 armhf 4.1.0+git191117-2build1 [143 kB] Get:98 http://ftpmaster.internal/ubuntu hirsute/main armhf libxft2 armhf 2.3.3-0ubuntu1 [32.5 kB] Get:99 http://ftpmaster.internal/ubuntu hirsute/main armhf x11-common all 1:7.7+19ubuntu15 [22.2 kB] Get:100 http://ftpmaster.internal/ubuntu hirsute/main armhf libxss1 armhf 1:1.2.3-1 [7512 B] Get:101 http://ftpmaster.internal/ubuntu hirsute/main armhf libtk8.6 armhf 8.6.10-1 [630 kB] Get:102 http://ftpmaster.internal/ubuntu hirsute/main armhf libice6 armhf 2:1.0.10-1 [33.5 kB] Get:103 http://ftpmaster.internal/ubuntu hirsute/main armhf libsm6 armhf 2:1.2.3-1 [14.1 kB] Get:104 http://ftpmaster.internal/ubuntu hirsute/main armhf libxt6 armhf 1:1.2.0-1 [133 kB] Get:105 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-base-core armhf 4.0.2-1build1 [24.6 MB] Get:106 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libgfortran-10-dev armhf 10.2.0-16ubuntu1 [302 kB] Get:107 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf gfortran-10 armhf 10.2.0-16ubuntu1 [57.6 MB] Get:108 http://ftpmaster.internal/ubuntu hirsute/main armhf gfortran armhf 4:10.2.0-1ubuntu1 [1376 B] Get:109 http://ftpmaster.internal/ubuntu hirsute/main armhf libblas-dev armhf 3.9.0-3ubuntu1 [104 kB] Get:110 http://ftpmaster.internal/ubuntu hirsute/main armhf liblapack-dev armhf 3.9.0-3ubuntu1 [1705 kB] Get:111 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libncurses-dev armhf 6.2+20200918-1 [308 kB] Get:112 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libncurses5-dev armhf 6.2+20200918-1 [992 B] Get:113 http://ftpmaster.internal/ubuntu hirsute/main armhf libreadline-dev armhf 8.0-4 [128 kB] Get:114 http://ftpmaster.internal/ubuntu hirsute/main armhf libjpeg-turbo8-dev armhf 2.0.3-0ubuntu2 [203 kB] Get:115 http://ftpmaster.internal/ubuntu hirsute/main armhf libjpeg8-dev armhf 8c-2ubuntu8 [1554 B] Get:116 http://ftpmaster.internal/ubuntu hirsute/main armhf libjpeg-dev armhf 8c-2ubuntu8 [1554 B] Get:117 http://ftpmaster.internal/ubuntu hirsute/main armhf libpcre2-16-0 armhf 10.34-7 [156 kB] Get:118 http://ftpmaster.internal/ubuntu hirsute/main armhf libpcre2-32-0 armhf 10.34-7 [146 kB] Get:119 http://ftpmaster.internal/ubuntu hirsute/main armhf libpcre2-posix2 armhf 10.34-7 [5348 B] Get:120 http://ftpmaster.internal/ubuntu hirsute/main armhf libpcre2-dev armhf 10.34-7 [596 kB] Get:121 http://ftpmaster.internal/ubuntu hirsute/main armhf libpcre16-3 armhf 2:8.39-13 [128 kB] Get:122 http://ftpmaster.internal/ubuntu hirsute/main armhf libpcre32-3 armhf 2:8.39-13 [121 kB] Get:123 http://ftpmaster.internal/ubuntu hirsute/main armhf libpcrecpp0v5 armhf 2:8.39-13 [13.2 kB] Get:124 http://ftpmaster.internal/ubuntu hirsute/main armhf libpcre3-dev armhf 2:8.39-13 [477 kB] Get:125 http://ftpmaster.internal/ubuntu hirsute/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2ubuntu4 [149 kB] Get:126 http://ftpmaster.internal/ubuntu hirsute/main armhf libpng-dev armhf 1.6.37-3 [163 kB] Get:127 http://ftpmaster.internal/ubuntu hirsute/main armhf libbz2-dev armhf 1.0.8-4ubuntu2 [29.3 kB] Get:128 http://ftpmaster.internal/ubuntu hirsute/main armhf liblzma-dev armhf 5.2.4-1ubuntu1 [139 kB] Get:129 http://ftpmaster.internal/ubuntu hirsute/main armhf icu-devtools armhf 67.1-4 [169 kB] Get:130 http://ftpmaster.internal/ubuntu hirsute/main armhf libicu-dev armhf 67.1-4 [9338 kB] Get:131 http://ftpmaster.internal/ubuntu hirsute/main armhf pkg-config armhf 0.29.2-1ubuntu1 [43.4 kB] Get:132 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-base-dev all 4.0.2-1build1 [4524 B] Get:133 http://ftpmaster.internal/ubuntu hirsute/main armhf libfile-which-perl all 1.23-1 [13.8 kB] Get:134 http://ftpmaster.internal/ubuntu hirsute/universe armhf libswitch-perl all 2.17-2 [18.8 kB] Get:135 http://ftpmaster.internal/ubuntu hirsute/universe armhf dh-r all 20200710ubuntu1 [35.5 kB] Get:136 http://ftpmaster.internal/ubuntu hirsute/universe armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-1 [117 kB] Get:137 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libboost1.71-dev armhf 1.71.0-6ubuntu10 [9069 kB] Get:138 http://ftpmaster.internal/ubuntu hirsute/main armhf libboost-dev armhf 1.71.0.0ubuntu4 [3504 B] Get:139 http://ftpmaster.internal/ubuntu hirsute/main armhf libcairo-gobject2 armhf 1.16.0-4ubuntu1 [16.2 kB] Get:140 http://ftpmaster.internal/ubuntu hirsute/main armhf libgdk-pixbuf2.0-common all 2.40.0+dfsg-5 [4552 B] Get:141 http://ftpmaster.internal/ubuntu hirsute/main armhf libgdk-pixbuf2.0-0 armhf 2.40.0+dfsg-5 [152 kB] Get:142 http://ftpmaster.internal/ubuntu hirsute/universe armhf libjs-bootstrap all 3.4.1+dfsg-1 [124 kB] Get:143 http://ftpmaster.internal/ubuntu hirsute/universe armhf libjs-es5-shim all 4.5.14-1 [35.8 kB] Get:144 http://ftpmaster.internal/ubuntu hirsute/main armhf node-jquery all 3.5.1+dfsg-4 [309 kB] Get:145 http://ftpmaster.internal/ubuntu hirsute/main armhf libjs-jquery all 3.5.1+dfsg-4 [2308 B] Get:146 http://ftpmaster.internal/ubuntu hirsute/universe armhf libjs-jquery-datatables all 1.10.21+dfsg-1 [137 kB] Get:147 http://ftpmaster.internal/ubuntu hirsute/universe armhf libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-4 [648 kB] Get:148 http://ftpmaster.internal/ubuntu hirsute/universe armhf libjs-sifter.js all 0.6.0+dfsg-1 [12.2 kB] Get:149 http://ftpmaster.internal/ubuntu hirsute/universe armhf libjs-microplugin.js all 0.0.3+dfsg-1 [3466 B] Get:150 http://ftpmaster.internal/ubuntu hirsute/universe armhf libjs-jquery-selectize.js all 0.12.6+dfsg-1 [50.8 kB] Get:151 http://ftpmaster.internal/ubuntu hirsute/main armhf librsvg2-2 armhf 2.50.1+dfsg-1 [1940 kB] Get:152 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-bioc-biocgenerics all 0.36.0-1 [646 kB] Get:153 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-littler armhf 0.3.12-1 [79.9 kB] Get:154 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-rjson armhf 0.2.20-2 [124 kB] Get:155 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-bitops armhf 1.0-6-5 [22.8 kB] Get:156 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-rcurl armhf 1.98-1.2-1build1 [785 kB] Get:157 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-dbi all 1.1.0-3 [599 kB] Get:158 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-digest armhf 0.6.25-1build1 [168 kB] Get:159 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-pkgkitten all 0.2.0-1 [23.6 kB] Get:160 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-rcpp armhf 1.0.5-1 [1944 kB] Get:161 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-glue armhf 1.4.2-1 [133 kB] Get:162 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-gtable all 0.3.0+dfsg-2build1 [138 kB] Get:163 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-assertthat all 0.2.1-2build1 [56.5 kB] Get:164 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-crayon all 1.3.4-5 [498 kB] Get:165 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-fansi armhf 0.4.1-1build1 [336 kB] Get:166 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-cli all 2.1.0-1 [410 kB] Get:167 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-rlang armhf 0.4.8-1 [1126 kB] Get:168 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-ellipsis armhf 0.3.1-1build1 [31.4 kB] Get:169 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-evaluate all 0.14-2build1 [81.4 kB] Get:170 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-magrittr all 1.5-6build1 [154 kB] Get:171 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-r6 all 2.5.0-1 [98.5 kB] Get:172 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-backports armhf 1.1.10-1 [80.5 kB] Get:173 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-rprojroot all 1.3-2-3build1 [98.1 kB] Get:174 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-desc all 1.2.0-3build1 [299 kB] Get:175 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-ps armhf 1.4.0-1 [250 kB] Get:176 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-processx armhf 3.4.4-1 [290 kB] Get:177 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-callr all 3.5.1-1 [386 kB] Get:178 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-prettyunits all 1.1.1-2build1 [39.6 kB] Get:179 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-withr all 2.3.0-1 [195 kB] Get:180 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-pkgbuild all 1.1.0-1 [145 kB] Get:181 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-rstudioapi all 0.11-2 [243 kB] Get:182 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-pkgload armhf 1.1.0-1 [168 kB] Get:183 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-praise all 1.0.0-4build1 [20.3 kB] Get:184 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-testthat armhf 2.3.2-2build1 [1041 kB] Get:185 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-isoband armhf 0.2.2-1 [2129 kB] Get:186 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-mass armhf 7.3-53-1 [1106 kB] Get:187 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-lattice armhf 0.20-41-1build1 [1119 kB] Get:188 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-nlme armhf 3.1.149-1 [2195 kB] Get:189 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-matrix armhf 1.2-18-1build1 [3411 kB] Get:190 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-mgcv armhf 1.8-33-1 [2898 kB] Get:191 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-farver armhf 2.0.3-1build2 [1328 kB] Get:192 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-labeling all 0.4.2-1 [62.6 kB] Get:193 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-lifecycle all 0.2.0-2build1 [93.3 kB] Get:194 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-colorspace armhf 1.4-1+dfsg-2 [1487 kB] Get:195 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-munsell all 0.5.0-2build1 [208 kB] Get:196 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-rcolorbrewer all 1.1-2-3 [54.6 kB] Get:197 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-viridislite all 0.3.0-4 [58.9 kB] Get:198 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-scales all 1.1.1-1build1 [486 kB] Get:199 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-utf8 armhf 1.1.4-2 [127 kB] Get:200 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-vctrs armhf 0.3.4-1 [1004 kB] Get:201 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-pillar all 1.4.6-1 [226 kB] Get:202 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] Get:203 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-tibble armhf 3.0.4-1 [422 kB] Get:204 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-ggplot2 all 3.3.2+dfsg-2 [3124 kB] Get:205 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-gridextra all 2.3-3build1 [1024 kB] Get:206 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-png armhf 0.1-7-4 [38.6 kB] Get:207 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-base64enc armhf 0.1-3-3 [27.3 kB] Get:208 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-htmltools armhf 0.5.0-1ubuntu1 [225 kB] Get:209 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-jsonlite armhf 1.7.1+dfsg-1 [443 kB] Get:210 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-yaml armhf 2.2.1-1build1 [91.3 kB] Get:211 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-htmlwidgets all 1.5.2+dfsg-1 [116 kB] Get:212 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-lazyeval armhf 0.2.2-1build1 [142 kB] Get:213 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-crosstalk all 1.1.0.1+dfsg-3 [158 kB] Get:214 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-bh all 1.66.0-1 [5116 B] Get:215 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-later armhf 1.1.0.1+dfsg-1 [111 kB] Get:216 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-promises armhf 1.1.1+dfsg-1 [170 kB] Get:217 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-cran-dt all 0.16+dfsg-1 [205 kB] Get:218 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-rsvg armhf 2.1-1build1 [240 kB] Get:219 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf r-bioc-chemminer armhf 3.42.0+dfsg-1 [1149 kB] Get:220 http://ftpmaster.internal/ubuntu hirsute/universe armhf r-cran-runit all 0.4.32-3 [283 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 173 MB in 9s (19.6 MB/s) Selecting previously unselected package bsdextrautils. 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Setting up automake (1:1.16.2-4ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up fontconfig (2.13.1-2ubuntu3.1) ... Regenerating fonts cache... done. Setting up gettext (0.19.8.1-10build1) ... Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up libhx509-5-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libpango-1.0-0:armhf (1.46.2-1) ... Setting up libjpeg-dev:armhf (8c-2ubuntu8) ... Setting up libxext6:armhf (2:1.3.4-0ubuntu1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up gfortran (4:10.2.0-1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:armhf (1.16.0-4ubuntu1) ... 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Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.3.4-5) ... Setting up r-cran-gtable (0.3.0+dfsg-2build1) ... Setting up r-cran-labeling (0.4.2-1) ... Setting up r-cran-rsvg (2.1-1build1) ... Setting up r-cran-lattice (0.20-41-1build1) ... Setting up r-cran-ps (1.4.0-1) ... Setting up r-cran-nlme (3.1.149-1) ... Setting up r-cran-farver (2.0.3-1build2) ... Setting up r-cran-viridislite (0.3.0-4) ... Setting up r-cran-lazyeval (0.2.2-1build1) ... Setting up r-cran-r6 (2.5.0-1) ... Setting up r-cran-pkgkitten (0.2.0-1) ... Setting up r-cran-magrittr (1.5-6build1) ... Setting up r-cran-littler (0.3.12-1) ... Setting up r-cran-rcpp (1.0.5-1) ... Setting up r-bioc-biocgenerics (0.36.0-1) ... Setting up r-cran-rlang (0.4.8-1) ... Setting up r-base-dev (4.0.2-1build1) ... Setting up r-cran-assertthat (0.2.1-2build1) ... Setting up r-cran-withr (2.3.0-1) ... Setting up r-cran-backports (1.1.10-1) ... Setting up r-cran-processx (3.4.4-1) ... 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Setting up r-bioc-chemminer (3.42.0+dfsg-1) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13.2.1ubuntu1) ... Setting up dh-r (20200710ubuntu1) ... Setting up sbuild-build-depends-r-bioc-fmcsr-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.32-0ubuntu4) ... Processing triggers for systemd (246.6-2ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-121-generic arm64 (armv7l) Toolchain package versions: binutils_2.35.1-2ubuntu1 dpkg-dev_1.20.5ubuntu2 g++-10_10.2.0-16ubuntu1 gcc-10_10.2.0-16ubuntu1 libc6-dev_2.32-0ubuntu4 libstdc++-10-dev_10.2.0-16ubuntu1 libstdc++6_10.2.0-16ubuntu1 linux-libc-dev_5.8.0-26.27 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.1.11 autoconf_2.69-11.1 automake_1:1.16.2-4ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu16 base-passwd_3.5.48 bash_5.0-6ubuntu2 binutils_2.35.1-2ubuntu1 binutils-arm-linux-gnueabihf_2.35.1-2ubuntu1 binutils-common_2.35.1-2ubuntu1 bsdextrautils_2.36-3ubuntu1 bsdutils_1:2.36-3ubuntu1 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 ca-certificates_20200601 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pkg-config_0.29.2-1ubuntu1 pkgbinarymangler_146 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu2 r-base-core_4.0.2-1build1 r-base-dev_4.0.2-1build1 r-bioc-biocgenerics_0.36.0-1 r-bioc-chemminer_3.42.0+dfsg-1 r-cran-assertthat_0.2.1-2build1 r-cran-backports_1.1.10-1 r-cran-base64enc_0.1-3-3 r-cran-bh_1.66.0-1 r-cran-bitops_1.0-6-5 r-cran-callr_3.5.1-1 r-cran-cli_2.1.0-1 r-cran-colorspace_1.4-1+dfsg-2 r-cran-crayon_1.3.4-5 r-cran-crosstalk_1.1.0.1+dfsg-3 r-cran-dbi_1.1.0-3 r-cran-desc_1.2.0-3build1 r-cran-digest_0.6.25-1build1 r-cran-dt_0.16+dfsg-1 r-cran-ellipsis_0.3.1-1build1 r-cran-evaluate_0.14-2build1 r-cran-fansi_0.4.1-1build1 r-cran-farver_2.0.3-1build2 r-cran-ggplot2_3.3.2+dfsg-2 r-cran-glue_1.4.2-1 r-cran-gridextra_2.3-3build1 r-cran-gtable_0.3.0+dfsg-2build1 r-cran-htmltools_0.5.0-1ubuntu1 r-cran-htmlwidgets_1.5.2+dfsg-1 r-cran-isoband_0.2.2-1 r-cran-jsonlite_1.7.1+dfsg-1 r-cran-labeling_0.4.2-1 r-cran-later_1.1.0.1+dfsg-1 r-cran-lattice_0.20-41-1build1 r-cran-lazyeval_0.2.2-1build1 r-cran-lifecycle_0.2.0-2build1 r-cran-littler_0.3.12-1 r-cran-magrittr_1.5-6build1 r-cran-mass_7.3-53-1 r-cran-matrix_1.2-18-1build1 r-cran-mgcv_1.8-33-1 r-cran-munsell_0.5.0-2build1 r-cran-nlme_3.1.149-1 r-cran-pillar_1.4.6-1 r-cran-pkgbuild_1.1.0-1 r-cran-pkgconfig_2.0.3-2build1 r-cran-pkgkitten_0.2.0-1 r-cran-pkgload_1.1.0-1 r-cran-png_0.1-7-4 r-cran-praise_1.0.0-4build1 r-cran-prettyunits_1.1.1-2build1 r-cran-processx_3.4.4-1 r-cran-promises_1.1.1+dfsg-1 r-cran-ps_1.4.0-1 r-cran-r6_2.5.0-1 r-cran-rcolorbrewer_1.1-2-3 r-cran-rcpp_1.0.5-1 r-cran-rcurl_1.98-1.2-1build1 r-cran-rjson_0.2.20-2 r-cran-rlang_0.4.8-1 r-cran-rprojroot_1.3-2-3build1 r-cran-rstudioapi_0.11-2 r-cran-rsvg_2.1-1build1 r-cran-runit_0.4.32-3 r-cran-scales_1.1.1-1build1 r-cran-testthat_2.3.2-2build1 r-cran-tibble_3.0.4-1 r-cran-utf8_1.1.4-2 r-cran-vctrs_0.3.4-1 r-cran-viridislite_0.3.0-4 r-cran-withr_2.3.0-1 r-cran-yaml_2.2.1-1build1 readline-common_8.0-4 rpcsvc-proto_1.4.2-0ubuntu4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-fmcsr-dummy_0.invalid.0 sed_4.7-1ubuntu1 sensible-utils_0.0.13 shared-mime-info_2.0-1 systemd_246.6-2ubuntu1 systemd-sysv_246.6-2ubuntu1 systemd-timesyncd_246.6-2ubuntu1 sysvinit-utils_2.96-5ubuntu1 tar_1.30+dfsg-7 tzdata_2020d-1ubuntu1 ubuntu-keyring_2020.06.17.1 ucf_3.0043 unzip_6.0-25ubuntu1 util-linux_2.36-3ubuntu1 x11-common_1:7.7+19ubuntu15 xauth_1:1.1-0ubuntu1 xdg-utils_1.1.3-2ubuntu1 xz-utils_5.2.4-1ubuntu1 zip_3.0-11build1 zlib1g_1:1.2.11.dfsg-2ubuntu4 zlib1g-dev_1:1.2.11.dfsg-2ubuntu4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sun Nov 1 17:02:04 2020 UTC gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./r-bioc-fmcsr_1.32.0+dfsg-1.dsc dpkg-source: info: extracting r-bioc-fmcsr in /<>/r-bioc-fmcsr-1.32.0+dfsg dpkg-source: info: unpacking r-bioc-fmcsr_1.32.0+dfsg.orig.tar.xz dpkg-source: info: unpacking r-bioc-fmcsr_1.32.0+dfsg-1.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-20236393 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-20236393 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-20236393 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package r-bioc-fmcsr dpkg-buildpackage: info: source version 1.32.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary-arch dh binary-arch --buildsystem R dh_update_autotools_config -a -O--buildsystem=R dh_autoreconf -a -O--buildsystem=R dh_auto_configure -a -O--buildsystem=R dh_auto_build -a -O--buildsystem=R dh_auto_test -a -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=R dh_prep -a -O--buildsystem=R dh_auto_install -a -O--buildsystem=R I: R Package: fmcsR Version: 1.32.0 I: Building using R version 4.0.2-1build1 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Sun, 01 Nov 2020 17:39:46 +0100 mkdir -p /<>/r-bioc-fmcsr-1.32.0\+dfsg/debian/r-bioc-fmcsr/usr/lib/R/site-library R CMD INSTALL -l /<>/r-bioc-fmcsr-1.32.0\+dfsg/debian/r-bioc-fmcsr/usr/lib/R/site-library --clean . "--built-timestamp='Sun, 01 Nov 2020 17:39:46 +0100'" * installing *source* package ‘fmcsR’ ... ** using staged installation checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for inline... inline checking for size_t... yes checking for alarm... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating config.h config.status: config.h is unchanged ** libs make[1]: Entering directory '/<>/r-bioc-fmcsr-1.32.0+dfsg/src' g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-rHNXP1/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c MCS.cpp -o MCS.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-rHNXP1/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c MCSCompound.cpp -o MCSCompound.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-rHNXP1/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c MCSMap.cpp -o MCSMap.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-rHNXP1/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c MCSRingDetector.cpp -o MCSRingDetector.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-rHNXP1/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fmcs_R_wrap.cpp -o fmcs_R_wrap.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-rHNXP1/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c util.cpp -o util.o g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o fmcsR.so MCS.o MCSCompound.o MCSMap.o MCSRingDetector.o fmcs_R_wrap.o util.o -L/usr/lib/R/lib -lR make[1]: Leaving directory '/<>/r-bioc-fmcsr-1.32.0+dfsg/src' make[1]: Entering directory '/<>/r-bioc-fmcsr-1.32.0+dfsg/src' make[1]: Leaving directory '/<>/r-bioc-fmcsr-1.32.0+dfsg/src' installing to /<>/r-bioc-fmcsr-1.32.0+dfsg/debian/r-bioc-fmcsr/usr/lib/R/site-library/00LOCK-r-bioc-fmcsr-1.32.0+dfsg/00new/fmcsR/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fmcsR) Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 299. Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 300. Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 303. W: Ignoring specified R dependency: R (>= 2.10.0) I: Using r-bioc-chemminer for Depends:ChemmineR I: Using r-bioc-biocstyle for Suggests:BiocStyle I: Using r-cran-knitr for Suggests:knitr W: Cannot find a debian package for Suggests:knitcitations W: Cannot find a debian package for Suggests:knitrBootstrap I: Using r-cran-runit for Imports:RUnit I: Using r-bioc-chemminer for Imports:ChemmineR I: Using r-bioc-biocgenerics for Imports:BiocGenerics I: BioConductor API version: r-api-bioc-3.12 I: Use r-bioc-fmcsr as Debian binary package for variables substitution dh_installdocs -a -O--buildsystem=R dh_installchangelogs -a -O--buildsystem=R dh_installsystemduser -a -O--buildsystem=R dh_perl -a -O--buildsystem=R dh_link -a -O--buildsystem=R dh_strip_nondeterminism -a -O--buildsystem=R dh_compress -a -O--buildsystem=R dh_fixperms -a -O--buildsystem=R dh_missing -a -O--buildsystem=R dh_dwz -a -a -O--buildsystem=R dh_strip -a -a -O--buildsystem=R dh_makeshlibs -a -a -O--buildsystem=R dh_shlibdeps -a -a -O--buildsystem=R dh_installdeb -a -O--buildsystem=R dh_gencontrol -a -O--buildsystem=R dh_md5sums -a -O--buildsystem=R dh_builddeb -a -O--buildsystem=R INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing r-bioc-fmcsr (in debian/r-bioc-fmcsr); do_strip: , oemstrip: pkgstriptranslations: processing r-bioc-fmcsr-dbgsym (in debian/.debhelper/r-bioc-fmcsr/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/r-bioc-fmcsr/DEBIAN/control, package r-bioc-fmcsr, directory debian/r-bioc-fmcsr pkgstripfiles: processing control file: debian/.debhelper/r-bioc-fmcsr/dbgsym-root/DEBIAN/control, package r-bioc-fmcsr-dbgsym, directory debian/.debhelper/r-bioc-fmcsr/dbgsym-root dpkg-deb: building package 'r-bioc-fmcsr-dbgsym' in 'debian/.debhelper/scratch-space/build-r-bioc-fmcsr/r-bioc-fmcsr-dbgsym_1.32.0+dfsg-1_armhf.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package r-bioc-fmcsr ... pkgstripfiles: No PNG files. dpkg-deb: building package 'r-bioc-fmcsr' in '../r-bioc-fmcsr_1.32.0+dfsg-1_armhf.deb'. Renaming r-bioc-fmcsr-dbgsym_1.32.0+dfsg-1_armhf.deb to r-bioc-fmcsr-dbgsym_1.32.0+dfsg-1_armhf.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../r-bioc-fmcsr_1.32.0+dfsg-1_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-11-01T23:21:28Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ r-bioc-fmcsr_1.32.0+dfsg-1_armhf.changes: ----------------------------------------- Format: 1.8 Date: Sun, 01 Nov 2020 17:39:46 +0100 Source: r-bioc-fmcsr Binary: r-bioc-fmcsr Architecture: armhf Version: 1.32.0+dfsg-1 Distribution: hirsute-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Dylan Aïssi Description: r-bioc-fmcsr - GNU R mismatch tolerant maximum common substructure searching Changes: r-bioc-fmcsr (1.32.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) * Trim trailing whitespace. Checksums-Sha1: 8e51f71d8e5f3355bd99d7412f54938255884b85 758488 r-bioc-fmcsr-dbgsym_1.32.0+dfsg-1_armhf.ddeb 30e1350b5bbb132e886cda6d3c1a5034c607a6b5 11932 r-bioc-fmcsr_1.32.0+dfsg-1_armhf.buildinfo e7775c5f401e1af718bf8513041aca927745e4ae 215356 r-bioc-fmcsr_1.32.0+dfsg-1_armhf.deb Checksums-Sha256: b416e8ced3153779676f7e2ded7e181cbefdad1f837bc07b0b83b8916ec8a37b 758488 r-bioc-fmcsr-dbgsym_1.32.0+dfsg-1_armhf.ddeb fff54fc5770259ff7ada413a91955a31269e2ed30245c701ec14dad200752feb 11932 r-bioc-fmcsr_1.32.0+dfsg-1_armhf.buildinfo 8f69c9299acbdf976865603390cab987a50c5354a3269e3ae935317d9f30b44b 215356 r-bioc-fmcsr_1.32.0+dfsg-1_armhf.deb Files: d9f5802e046b749ce2be260c91c101f3 758488 debug optional r-bioc-fmcsr-dbgsym_1.32.0+dfsg-1_armhf.ddeb 79f323b43fd1b1d78f9e2ec8b31b9dc5 11932 gnu-r optional r-bioc-fmcsr_1.32.0+dfsg-1_armhf.buildinfo debd6cc82be40ce7156cdf818946d71b 215356 gnu-r optional r-bioc-fmcsr_1.32.0+dfsg-1_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: r-bioc-fmcsr Binary: r-bioc-fmcsr r-bioc-fmcsr-dbgsym Architecture: armhf Version: 1.32.0+dfsg-1 Checksums-Md5: d9f5802e046b749ce2be260c91c101f3 758488 r-bioc-fmcsr-dbgsym_1.32.0+dfsg-1_armhf.ddeb debd6cc82be40ce7156cdf818946d71b 215356 r-bioc-fmcsr_1.32.0+dfsg-1_armhf.deb Checksums-Sha1: 8e51f71d8e5f3355bd99d7412f54938255884b85 758488 r-bioc-fmcsr-dbgsym_1.32.0+dfsg-1_armhf.ddeb e7775c5f401e1af718bf8513041aca927745e4ae 215356 r-bioc-fmcsr_1.32.0+dfsg-1_armhf.deb Checksums-Sha256: b416e8ced3153779676f7e2ded7e181cbefdad1f837bc07b0b83b8916ec8a37b 758488 r-bioc-fmcsr-dbgsym_1.32.0+dfsg-1_armhf.ddeb 8f69c9299acbdf976865603390cab987a50c5354a3269e3ae935317d9f30b44b 215356 r-bioc-fmcsr_1.32.0+dfsg-1_armhf.deb Build-Origin: Ubuntu Build-Architecture: armhf Build-Date: Sun, 01 Nov 2020 23:21:26 +0000 Build-Path: /<>/r-bioc-fmcsr-1.32.0+dfsg Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-4ubuntu1), autopoint (= 0.19.8.1-10build1), autotools-dev (= 20180224.1), base-files (= 11ubuntu16), base-passwd (= 3.5.48), bash (= 5.0-6ubuntu2), binutils (= 2.35.1-2ubuntu1), binutils-arm-linux-gnueabihf (= 2.35.1-2ubuntu1), binutils-common (= 2.35.1-2ubuntu1), bsdextrautils (= 2.36-3ubuntu1), bsdutils (= 1:2.36-3ubuntu1), build-essential (= 12.8ubuntu3), bzip2 (= 1.0.8-4ubuntu2), ca-certificates (= 20200601), coreutils (= 8.32-3ubuntu1), cpp (= 4:10.2.0-1ubuntu1), cpp-10 (= 10.2.0-16ubuntu1), dash (= 0.5.10.2-7), dctrl-tools (= 2.24-3), debconf (= 1.5.74), debhelper (= 13.2.1ubuntu1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-r (= 20200710ubuntu1), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3ubuntu1), dpkg (= 1.20.5ubuntu2), dpkg-dev (= 1.20.5ubuntu2), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 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1.23-1), libfontconfig1 (= 2.13.1-2ubuntu3.1), libfreetype6 (= 2.10.2+dfsg-3ubuntu1), libfribidi0 (= 1.0.8-2), libgcc-10-dev (= 10.2.0-16ubuntu1), libgcc-s1 (= 10.2.0-16ubuntu1), libgcrypt20 (= 1.8.5-5ubuntu2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libgdk-pixbuf2.0-0 (= 2.40.0+dfsg-5), libgdk-pixbuf2.0-common (= 2.40.0+dfsg-5), libgfortran-10-dev (= 10.2.0-16ubuntu1), libgfortran5 (= 10.2.0-16ubuntu1), libglib2.0-0 (= 2.66.1-2), libgmp10 (= 2:6.2.0+dfsg-6ubuntu1), libgnutls30 (= 3.6.15-4ubuntu2), libgomp1 (= 10.2.0-16ubuntu1), libgpg-error0 (= 1.38-2), libgraphite2-3 (= 1.3.14-1), libgssapi-krb5-2 (= 1.17-10), libgssapi3-heimdal (= 7.7.0+dfsg-2), libharfbuzz0b (= 2.6.4-1ubuntu5), libhcrypto4-heimdal (= 7.7.0+dfsg-2), libheimbase1-heimdal (= 7.7.0+dfsg-2), libheimntlm0-heimdal (= 7.7.0+dfsg-2), libhogweed6 (= 3.6-2), libhx509-5-heimdal (= 7.7.0+dfsg-2), libice6 (= 2:1.0.10-1), libicu-dev (= 67.1-4), libicu67 (= 67.1-4), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libjbig0 (= 2.1-3.1build1), libjpeg-dev (= 8c-2ubuntu8), libjpeg-turbo8 (= 2.0.3-0ubuntu2), libjpeg-turbo8-dev (= 2.0.3-0ubuntu2), libjpeg8 (= 8c-2ubuntu8), libjpeg8-dev (= 8c-2ubuntu8), libjs-bootstrap (= 3.4.1+dfsg-1), libjs-es5-shim (= 4.5.14-1), libjs-jquery (= 3.5.1+dfsg-4), libjs-jquery-datatables (= 1.10.21+dfsg-1), libjs-jquery-datatables-extensions (= 0.0+git20150910.28fd64e+dfsg-4), libjs-jquery-selectize.js (= 0.12.6+dfsg-1), libjs-microplugin.js (= 0.0.3+dfsg-1), libjs-sifter.js (= 0.6.0+dfsg-1), libk5crypto3 (= 1.17-10), libkeyutils1 (= 1.6.1-2ubuntu1), libkrb5-26-heimdal (= 7.7.0+dfsg-2), libkrb5-3 (= 1.17-10), libkrb5support0 (= 1.17-10), liblapack-dev (= 3.9.0-3ubuntu1), liblapack3 (= 3.9.0-3ubuntu1), libldap-2.4-2 (= 2.4.53+dfsg-1ubuntu1), liblz4-1 (= 1.9.2-2), liblzma-dev (= 5.2.4-1ubuntu1), liblzma5 (= 5.2.4-1ubuntu1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.36-3ubuntu1), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libncurses-dev (= 6.2+20200918-1), libncurses5-dev (= 6.2+20200918-1), libncurses6 (= 6.2+20200918-1), libncursesw6 (= 6.2+20200918-1), libnettle8 (= 3.6-2), libnghttp2-14 (= 1.41.0-3), libnsl-dev (= 1.3.0-0ubuntu3), libnsl2 (= 1.3.0-0ubuntu3), libp11-kit0 (= 0.23.21-2build1), libpam-modules (= 1.3.1-5ubuntu6), libpam-modules-bin (= 1.3.1-5ubuntu6), libpam-runtime (= 1.3.1-5ubuntu6), libpam0g (= 1.3.1-5ubuntu6), libpango-1.0-0 (= 1.46.2-1), libpangocairo-1.0-0 (= 1.46.2-1), libpangoft2-1.0-0 (= 1.46.2-1), libpaper-utils (= 1.1.28), libpaper1 (= 1.1.28), libpcre16-3 (= 2:8.39-13), libpcre2-16-0 (= 10.34-7), libpcre2-32-0 (= 10.34-7), libpcre2-8-0 (= 10.34-7), libpcre2-dev (= 10.34-7), libpcre2-posix2 (= 10.34-7), libpcre3 (= 2:8.39-13), libpcre3-dev (= 2:8.39-13), libpcre32-3 (= 2:8.39-13), libpcrecpp0v5 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.3-1), libpixman-1-0 (= 0.38.4-0ubuntu1), libpng-dev (= 1.6.37-3), libpng16-16 (= 1.6.37-3), libpsl5 (= 0.21.0-1.1ubuntu1), libreadline-dev (= 8.0-4), libreadline8 (= 8.0-4), libroken18-heimdal (= 7.7.0+dfsg-2), librsvg2-2 (= 2.50.1+dfsg-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build2), libsasl2-2 (= 2.1.27+dfsg-2ubuntu1), libsasl2-modules-db (= 2.1.27+dfsg-2ubuntu1), libseccomp2 (= 2.4.3-1ubuntu5), libselinux1 (= 3.1-2build1), libsigsegv2 (= 2.12-2build1), libsm6 (= 2:1.2.3-1), libsmartcols1 (= 2.36-3ubuntu1), libsqlite3-0 (= 3.33.0-1), libssh-4 (= 0.9.4-1ubuntu3), libssl1.1 (= 1.1.1f-1ubuntu4), libstdc++-10-dev (= 10.2.0-16ubuntu1), libstdc++6 (= 10.2.0-16ubuntu1), libsub-override-perl (= 0.09-2), libswitch-perl (= 2.17-2), libsystemd0 (= 246.6-2ubuntu1), libtasn1-6 (= 4.16.0-2), libtcl8.6 (= 8.6.10+dfsg-1), libthai-data (= 0.1.28-3), libthai0 (= 0.1.28-3), libtiff5 (= 4.1.0+git191117-2build1), libtinfo6 (= 6.2+20200918-1), libtirpc-common (= 1.2.6-3), libtirpc-dev (= 1.2.6-3), libtirpc3 (= 1.2.6-3), libtk8.6 (= 8.6.10-1), libtool (= 2.4.6-14), libubsan1 (= 10.2.0-16ubuntu1), libuchardet0 (= 0.0.7-1), libudev1 (= 246.6-2ubuntu1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36-3ubuntu1), libwebp6 (= 0.6.1-2), libwind0-heimdal (= 7.7.0+dfsg-2), libx11-6 (= 2:1.6.12-1), libx11-data (= 2:1.6.12-1), libxau6 (= 1:1.0.9-0ubuntu1), libxcb-render0 (= 1.14-2), libxcb-shm0 (= 1.14-2), libxcb1 (= 1.14-2), libxdmcp6 (= 1:1.1.3-0ubuntu1), libxext6 (= 2:1.3.4-0ubuntu1), libxft2 (= 2.3.3-0ubuntu1), libxml2 (= 2.9.10+dfsg-6.2), libxmuu1 (= 2:1.1.3-0ubuntu1), libxrender1 (= 1:0.9.10-1), libxss1 (= 1:1.2.3-1), libxt6 (= 1:1.2.0-1), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.8.0-26.27), login (= 1:4.8.1-1ubuntu6), lsb-base (= 11.1.0ubuntu2), m4 (= 1.4.18-4), make (= 4.3-4ubuntu1), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20200918-1), ncurses-bin (= 6.2+20200918-1), node-jquery (= 3.5.1+dfsg-4), openssl (= 1.1.1f-1ubuntu4), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), pkg-config (= 0.29.2-1ubuntu1), po-debconf (= 1.0.21), r-base-core (= 4.0.2-1build1), r-base-dev (= 4.0.2-1build1), r-bioc-biocgenerics (= 0.36.0-1), r-bioc-chemminer (= 3.42.0+dfsg-1), r-cran-assertthat (= 0.2.1-2build1), r-cran-backports (= 1.1.10-1), r-cran-base64enc (= 0.1-3-3), r-cran-bh (= 1.66.0-1), r-cran-bitops (= 1.0-6-5), r-cran-callr (= 3.5.1-1), r-cran-cli (= 2.1.0-1), r-cran-colorspace (= 1.4-1+dfsg-2), r-cran-crayon (= 1.3.4-5), r-cran-crosstalk (= 1.1.0.1+dfsg-3), r-cran-dbi (= 1.1.0-3), r-cran-desc (= 1.2.0-3build1), r-cran-digest (= 0.6.25-1build1), r-cran-dt (= 0.16+dfsg-1), r-cran-ellipsis (= 0.3.1-1build1), r-cran-evaluate (= 0.14-2build1), r-cran-fansi (= 0.4.1-1build1), r-cran-farver (= 2.0.3-1build2), r-cran-ggplot2 (= 3.3.2+dfsg-2), r-cran-glue (= 1.4.2-1), r-cran-gridextra (= 2.3-3build1), r-cran-gtable (= 0.3.0+dfsg-2build1), r-cran-htmltools (= 0.5.0-1ubuntu1), r-cran-htmlwidgets (= 1.5.2+dfsg-1), r-cran-isoband (= 0.2.2-1), r-cran-jsonlite (= 1.7.1+dfsg-1), r-cran-labeling (= 0.4.2-1), r-cran-later (= 1.1.0.1+dfsg-1), r-cran-lattice (= 0.20-41-1build1), r-cran-lazyeval (= 0.2.2-1build1), r-cran-lifecycle (= 0.2.0-2build1), r-cran-littler (= 0.3.12-1), r-cran-magrittr (= 1.5-6build1), r-cran-mass (= 7.3-53-1), r-cran-matrix (= 1.2-18-1build1), r-cran-mgcv (= 1.8-33-1), r-cran-munsell (= 0.5.0-2build1), r-cran-nlme (= 3.1.149-1), r-cran-pillar (= 1.4.6-1), r-cran-pkgbuild (= 1.1.0-1), r-cran-pkgconfig (= 2.0.3-2build1), r-cran-pkgkitten (= 0.2.0-1), r-cran-pkgload (= 1.1.0-1), r-cran-png (= 0.1-7-4), r-cran-praise (= 1.0.0-4build1), r-cran-prettyunits (= 1.1.1-2build1), r-cran-processx (= 3.4.4-1), r-cran-promises (= 1.1.1+dfsg-1), r-cran-ps (= 1.4.0-1), r-cran-r6 (= 2.5.0-1), r-cran-rcolorbrewer (= 1.1-2-3), r-cran-rcpp (= 1.0.5-1), r-cran-rcurl (= 1.98-1.2-1build1), r-cran-rjson (= 0.2.20-2), r-cran-rlang (= 0.4.8-1), r-cran-rprojroot (= 1.3-2-3build1), r-cran-rstudioapi (= 0.11-2), r-cran-rsvg (= 2.1-1build1), r-cran-runit (= 0.4.32-3), r-cran-scales (= 1.1.1-1build1), r-cran-testthat (= 2.3.2-2build1), r-cran-tibble (= 3.0.4-1), r-cran-utf8 (= 1.1.4-2), r-cran-vctrs (= 0.3.4-1), r-cran-viridislite (= 0.3.0-4), r-cran-withr (= 2.3.0-1), r-cran-yaml (= 2.2.1-1build1), readline-common (= 8.0-4), rpcsvc-proto (= 1.4.2-0ubuntu4), sed (= 4.7-1ubuntu1), sensible-utils (= 0.0.13), shared-mime-info (= 2.0-1), sysvinit-utils (= 2.96-5ubuntu1), tar (= 1.30+dfsg-7), tzdata (= 2020d-1ubuntu1), ucf (= 3.0043), unzip (= 6.0-25ubuntu1), util-linux (= 2.36-3ubuntu1), x11-common (= 1:7.7+19ubuntu15), xauth (= 1:1.1-0ubuntu1), xdg-utils (= 1.1.3-2ubuntu1), xz-utils (= 5.2.4-1ubuntu1), zip (= 3.0-11build1), zlib1g (= 1:1.2.11.dfsg-2ubuntu4), zlib1g-dev (= 1:1.2.11.dfsg-2ubuntu4) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1604248786" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ r-bioc-fmcsr_1.32.0+dfsg-1_armhf.deb ------------------------------------ new Debian package, version 2.0. size 215356 bytes: control archive=1868 bytes. 1255 bytes, 23 lines control 2382 bytes, 31 lines md5sums Package: r-bioc-fmcsr Version: 1.32.0+dfsg-1 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian R Packages Maintainers Installed-Size: 351 Depends: r-base-core (>= 4.0.2-1build1), r-api-4.0, r-api-bioc-3.12, r-bioc-chemminer, r-cran-runit, r-bioc-biocgenerics, libc6 (>= 2.4), libgcc-s1 (>= 3.5), libstdc++6 (>= 5.2) Suggests: r-bioc-biocstyle, r-cran-knitr Section: gnu-r Priority: optional Homepage: https://bioconductor.org/packages/fmcsR/ Description: GNU R mismatch tolerant maximum common substructure searching The fmcsR package introduces an efficient maximum common substructure (MCS) algorithms combined with a novel matching strategy that allows for atom and/or bond mismatches in the substructures shared among two small molecules. The resulting flexible MCSs (FMCSs) are often larger than strict MCSs, resulting in the identification of more common features in their source structures, as well as a higher sensitivity in finding compounds with weak structural similarities. The fmcsR package provides several utilities to use the FMCS algorithm for pairwise compound comparisons, structure similarity searching and clustering. drwxr-xr-x root/root 0 2020-11-01 16:39 ./ drwxr-xr-x root/root 0 2020-11-01 16:39 ./usr/ drwxr-xr-x root/root 0 2020-11-01 16:39 ./usr/lib/ drwxr-xr-x root/root 0 2020-11-01 16:39 ./usr/lib/R/ drwxr-xr-x root/root 0 2020-11-01 16:39 ./usr/lib/R/site-library/ drwxr-xr-x root/root 0 2020-11-01 16:39 ./usr/lib/R/site-library/fmcsR/ -rw-r--r-- root/root 86 2020-11-01 16:39 ./usr/lib/R/site-library/fmcsR/CITATION -rw-r--r-- root/root 1753 2020-11-01 16:39 ./usr/lib/R/site-library/fmcsR/DESCRIPTION -rw-r--r-- root/root 324 2020-11-01 16:39 ./usr/lib/R/site-library/fmcsR/INDEX drwxr-xr-x root/root 0 2020-11-01 16:39 ./usr/lib/R/site-library/fmcsR/Meta/ -rw-r--r-- root/root 540 2020-11-01 16:39 ./usr/lib/R/site-library/fmcsR/Meta/Rd.rds -rw-r--r-- root/root 120 2020-11-01 16:39 ./usr/lib/R/site-library/fmcsR/Meta/data.rds -rw-r--r-- root/root 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./usr/share/doc/r-bioc-fmcsr/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: n/a Build-Time: 109 Distribution: hirsute-proposed Host Architecture: armhf Install-Time: 91 Job: r-bioc-fmcsr_1.32.0+dfsg-1.dsc Machine Architecture: arm64 Package: r-bioc-fmcsr Package-Time: 202 Source-Version: 1.32.0+dfsg-1 Space: n/a Status: successful Version: 1.32.0+dfsg-1 -------------------------------------------------------------------------------- Finished at 2020-11-01T23:21:28Z Build needed 00:03:22, no disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20236393 Scanning for processes to kill in build PACKAGEBUILD-20236393