https://launchpad.net/ubuntu/+source/r-bioc-fmcsr/1.42.0+dfsg1-1/+build/26922043 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos01-arm64-024 5.4.0-164-generic #181-Ubuntu SMP Fri Sep 1 13:42:23 UTC 2023 aarch64 Buildd toolchain package versions: launchpad-buildd_235~645~ubuntu20.04.1 python3-lpbuildd_235~645~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.11 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1.1. Syncing the system clock with the buildd NTP service... 27 Oct 00:42:32 ntpdate[1822]: adjust time server 10.211.37.1 offset -0.001101 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-26922043 --image-type chroot /home/buildd/filecache-default/59612f0fc5bae33f6226b6e60c2e882b82c04bd0 Creating target for build PACKAGEBUILD-26922043 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-26922043 Starting target for build PACKAGEBUILD-26922043 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-26922043 'deb http://ftpmaster.internal/ubuntu noble main universe' 'deb http://ftpmaster.internal/ubuntu noble-security main universe' 'deb http://ftpmaster.internal/ubuntu noble-updates main universe' 'deb http://ftpmaster.internal/ubuntu noble-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-26922043 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-26922043 Updating target for build PACKAGEBUILD-26922043 Get:1 http://ftpmaster.internal/ubuntu noble InRelease [213 kB] Get:2 http://ftpmaster.internal/ubuntu noble-security InRelease [74.9 kB] Get:3 http://ftpmaster.internal/ubuntu noble-updates InRelease [74.9 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease [74.9 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf Packages [1334 kB] Get:6 http://ftpmaster.internal/ubuntu noble/universe armhf Packages [13.9 MB] Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main armhf Packages [189 kB] Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main Translation-en [76.8 kB] Get:9 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf Packages [1161 kB] Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe Translation-en [767 kB] Fetched 17.9 MB in 5s (3578 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt apt-utils base-passwd bash-completion cpp-13 debianutils diffutils g++-13 gcc-13 gcc-13-base grep libapt-pkg6.0 libasan8 libatomic1 libc-bin libc-dev-bin libc6 libc6-dev libcc1-0 libgcc-13-dev libgcc-s1 libgomp1 liblzma5 libncursesw6 libpng16-16 libsqlite3-0 libssl3 libstdc++-13-dev libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libubsan1 libudev1 libxxhash0 libzstd1 mawk ncurses-base ncurses-bin openssl optipng systemd systemd-dev systemd-sysv xz-utils 45 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 60.4 MB of archives. After this operation, 20.5 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main armhf debianutils armhf 5.14 [88.0 kB] Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main armhf diffutils armhf 1:3.10-1 [167 kB] Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main armhf grep armhf 3.11-3 [157 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main armhf ncurses-bin armhf 6.4+20231016-1 [176 kB] Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libc6-dev armhf 2.38-3ubuntu1 [1347 kB] Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libc-dev-bin armhf 2.38-3ubuntu1 [18.9 kB] Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libubsan1 armhf 13.2.0-6ubuntu1 [1072 kB] Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gcc-13-base armhf 13.2.0-6ubuntu1 [44.3 kB] Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgcc-s1 armhf 13.2.0-6ubuntu1 [41.4 kB] Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgomp1 armhf 13.2.0-6ubuntu1 [120 kB] Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libatomic1 armhf 13.2.0-6ubuntu1 [7766 B] Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libasan8 armhf 13.2.0-6ubuntu1 [2749 kB] Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main armhf cpp-13 armhf 13.2.0-6ubuntu1 [8246 kB] Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libcc1-0 armhf 13.2.0-6ubuntu1 [43.7 kB] Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main armhf g++-13 armhf 13.2.0-6ubuntu1 [9436 kB] Get:16 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gcc-13 armhf 13.2.0-6ubuntu1 [16.5 MB] Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgcc-13-dev armhf 13.2.0-6ubuntu1 [901 kB] Get:18 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libstdc++-13-dev armhf 13.2.0-6ubuntu1 [2447 kB] Get:19 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libstdc++6 armhf 13.2.0-6ubuntu1 [697 kB] Get:20 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libzstd1 armhf 1.5.5+dfsg2-2 [265 kB] Get:21 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libc6 armhf 2.38-3ubuntu1 [2818 kB] Get:22 http://ftpmaster.internal/ubuntu noble-proposed/main armhf base-passwd armhf 3.6.2 [51.0 kB] Get:23 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libc-bin armhf 2.38-3ubuntu1 [532 kB] Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main armhf ncurses-base all 6.4+20231016-1 [24.7 kB] Get:25 http://ftpmaster.internal/ubuntu noble-proposed/main armhf liblzma5 armhf 5.4.4-0.1 [110 kB] Get:26 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libssl3 armhf 3.0.10-1ubuntu2.1 [1572 kB] Get:27 http://ftpmaster.internal/ubuntu noble-proposed/main armhf systemd-sysv armhf 253.5-1ubuntu7 [11.5 kB] Get:28 http://ftpmaster.internal/ubuntu noble-proposed/main armhf systemd-dev all 253.5-1ubuntu7 [78.5 kB] Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main armhf systemd armhf 253.5-1ubuntu7 [3043 kB] Get:30 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsystemd-shared armhf 253.5-1ubuntu7 [1781 kB] Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsystemd0 armhf 253.5-1ubuntu7 [379 kB] Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libudev1 armhf 253.5-1ubuntu7 [151 kB] Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxxhash0 armhf 0.8.2-2 [31.3 kB] Get:34 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libapt-pkg6.0 armhf 2.7.6 [960 kB] Get:35 http://ftpmaster.internal/ubuntu noble-proposed/main armhf apt armhf 2.7.6 [1360 kB] Get:36 http://ftpmaster.internal/ubuntu noble-proposed/main armhf apt-utils armhf 2.7.6 [212 kB] Get:37 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libncursesw6 armhf 6.4+20231016-1 [117 kB] Get:38 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libtinfo6 armhf 6.4+20231016-1 [91.0 kB] Get:39 http://ftpmaster.internal/ubuntu noble-proposed/main armhf mawk armhf 1.3.4.20230808-1 [114 kB] Get:40 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsqlite3-0 armhf 3.43.2-1 [587 kB] Get:41 http://ftpmaster.internal/ubuntu noble-proposed/main armhf openssl armhf 3.0.10-1ubuntu2.1 [1158 kB] Get:42 http://ftpmaster.internal/ubuntu noble-proposed/main armhf bash-completion all 1:2.11-8 [180 kB] Get:43 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libpng16-16 armhf 1.6.40-2 [166 kB] Get:44 http://ftpmaster.internal/ubuntu noble-proposed/main armhf xz-utils armhf 5.4.4-0.1 [266 kB] Get:45 http://ftpmaster.internal/ubuntu noble-proposed/main armhf optipng armhf 0.7.7-3 [82.2 kB] Preconfiguring packages ... Fetched 60.4 MB in 3s (19.7 MB/s) (Reading database ... 13362 files and directories currently installed.) Preparing to unpack .../debianutils_5.14_armhf.deb ... Unpacking debianutils (5.14) over (5.8-1) ... Setting up debianutils (5.14) ... (Reading database ... 13361 files and directories currently installed.) Preparing to unpack .../diffutils_1%3a3.10-1_armhf.deb ... Unpacking diffutils (1:3.10-1) over (1:3.8-4) ... Setting up diffutils (1:3.10-1) ... (Reading database ... 13361 files and directories currently installed.) Preparing to unpack .../archives/grep_3.11-3_armhf.deb ... Unpacking grep (3.11-3) over (3.11-2) ... Setting up grep (3.11-3) ... (Reading database ... 13361 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.4+20231016-1_armhf.deb ... Unpacking ncurses-bin (6.4+20231016-1) over (6.4+20230625-2) ... Setting up ncurses-bin (6.4+20231016-1) ... (Reading database ... 13361 files and directories currently installed.) 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Setting up libcc1-0:armhf (13.2.0-6ubuntu1) ... Setting up systemd (253.5-1ubuntu7) ... Initializing machine ID from random generator. Setting up optipng (0.7.7-3) ... Setting up libgcc-13-dev:armhf (13.2.0-6ubuntu1) ... Setting up libc6-dev:armhf (2.38-3ubuntu1) ... Setting up libstdc++-13-dev:armhf (13.2.0-6ubuntu1) ... Setting up systemd-sysv (253.5-1ubuntu7) ... Setting up gcc-13 (13.2.0-6ubuntu1) ... Setting up g++-13 (13.2.0-6ubuntu1) ... Processing triggers for libc-bin (2.38-3ubuntu1) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-26922043 armhf noble-proposed -c chroot:build-PACKAGEBUILD-26922043 --arch=armhf --dist=noble-proposed --nolog r-bioc-fmcsr_1.42.0+dfsg1-1.dsc Initiating build PACKAGEBUILD-26922043 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-164-generic #181-Ubuntu SMP Fri Sep 1 13:42:23 UTC 2023 armv7l sbuild (Debian sbuild) 0.79.0 (05 February 2020) on bos01-arm64-024.buildd +==============================================================================+ | r-bioc-fmcsr 1.42.0+dfsg1-1 (armhf) Fri, 27 Oct 2023 00:42:53 +0000 | +==============================================================================+ Package: r-bioc-fmcsr Version: 1.42.0+dfsg1-1 Source Version: 1.42.0+dfsg1-1 Distribution: noble-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-26922043/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/r-bioc-fmcsr-O78j1f/resolver-3QP9Hr' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- r-bioc-fmcsr_1.42.0+dfsg1-1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/r-bioc-fmcsr-O78j1f/r-bioc-fmcsr-1.42.0+dfsg1' with '<>' I: NOTICE: Log filtering will replace 'build/r-bioc-fmcsr-O78j1f' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-chemminer, r-cran-runit, r-bioc-biocgenerics, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-chemminer, r-cran-runit, r-bioc-biocgenerics, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [407 B] Get:5 copy:/<>/apt_archive ./ Packages [489 B] Fetched 1853 B in 0s (81.2 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: apt-utils bash-completion debconf-i18n krb5-locales libgpg-error-l10n libgpm2 liblocale-gettext-perl libnss-nis libnss-nisplus libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl psmisc uuid-runtime Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev dctrl-tools debhelper debugedit dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax fonts-noto-core fonts-noto-mono gettext gettext-base gfortran gfortran-13 groff-base icu-devtools intltool-debian javascript-common libalgorithm-c3-perl libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl libblas-dev libblas3 libboost1.81-dev libbrotli1 libbsd0 libbz2-dev libcairo-gobject2 libcairo2 libclass-c3-perl libclass-load-perl libclass-load-xs-perl libclone-perl libcurl3-gnutls libcurl4 libdata-optlist-perl libdatrie1 libdebhelper-perl libdeflate0 libdevel-callchecker-perl libdevel-globaldestruction-perl libdevel-overloadinfo-perl libdevel-stacktrace-perl libdist-checkconflicts-perl libdw1 libdynaloader-functions-perl libelf1 libencode-locale-perl libeval-closure-perl libexpat1 libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran-13-dev libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhttp-date-perl libhttp-message-perl libice6 libicu-dev libicu72 libio-html-perl libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 libldap2 liblerc4 liblua5.3-0 liblwp-mediatypes-perl liblzma-dev libmagic-mgc libmagic1 libmodule-implementation-perl libmodule-runtime-conflicts-perl libmodule-runtime-perl libmoose-perl libmro-compat-perl libnamespace-clean-perl libncurses-dev libncurses6 libnghttp2-14 libpackage-deprecationmanager-perl libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl libparams-util-perl libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpipeline1 libpixman-1-0 libpkgconf3 libpng-dev libpsl5 libreadline-dev librsvg2-2 librtmp1 libsasl2-2 libsasl2-modules-db libsharpyuv0 libsm6 libssh-4 libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff6 libtimedate-perl libtk8.6 libtool libtry-tiny-perl libuchardet0 liburi-perl libuv1 libvariable-magic-perl libwebp7 libwww-curl-perl libwww-curl-simple-perl libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 libyaml-0-2 m4 man-db node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data pkg-config pkgconf pkgconf-bin po-debconf r-base-core r-base-dev r-bioc-biocgenerics r-bioc-chemminer r-cran-base64enc r-cran-bh r-cran-bitops r-cran-bslib r-cran-cachem r-cran-cli r-cran-colorspace r-cran-commonmark r-cran-crayon r-cran-crosstalk r-cran-dbi r-cran-digest r-cran-dt r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fontawesome r-cran-fs r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-png r-cran-promises r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsvg r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-tibble r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml shared-mime-info ucf unzip x11-common xauth xdg-utils zip zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc debtags dh-make postgresql-client-common gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc gfortran-13-doc libcoarrays-dev groff apache2 | lighttpd | httpd liblapack-doc libboost1.81-doc libboost-atomic1.81-dev libboost-chrono1.81-dev libboost-container1.81-dev libboost-context1.81-dev libboost-contract1.81-dev libboost-coroutine1.81-dev libboost-date-time1.81-dev libboost-exception1.81-dev libboost-fiber1.81-dev libboost-filesystem1.81-dev libboost-graph1.81-dev libboost-graph-parallel1.81-dev libboost-iostreams1.81-dev libboost-locale1.81-dev libboost-log1.81-dev libboost-math1.81-dev libboost-mpi1.81-dev libboost-mpi-python1.81-dev libboost-numpy1.81-dev libboost-program-options1.81-dev libboost-python1.81-dev libboost-random1.81-dev libboost-regex1.81-dev libboost-serialization1.81-dev libboost-stacktrace1.81-dev libboost-system1.81-dev libboost-test1.81-dev libboost-thread1.81-dev libboost-timer1.81-dev libboost-type-erasure1.81-dev libboost-wave1.81-dev libboost1.81-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.81-dev low-memory-monitor libio-compress-brotli-perl icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc liblzma-doc ncurses-doc libscalar-number-perl readline-doc librsvg2-bin tcl8.6 tk8.6 libtool-doc gcj-jdk libbusiness-isbn-perl libregexp-ipv6-perl libwww-perl libcurl4-gnutls-dev m4-doc apparmor less www-browser nodejs texlive-latex-recommended texlive-xetex texlive-luatex pandoc-citeproc texlive-latex-extra context wkhtmltopdf ghc php python ruby libjs-katex citation-style-language-styles libmail-box-perl elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo r-bioc-biobase r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-rsqlite r-cran-scatterplot3d r-cran-gplots r-bioc-fmcsr r-cran-snow r-cran-rpostgresql r-bioc-biocstyle r-cran-biocmanager r-cran-bibtex r-cran-callr r-cran-covr r-cran-processx r-cran-ps r-cran-rprojroot r-cran-rstudioapi r-cran-whoami r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-dplyr r-cran-jpeg r-cran-viridis r-cran-curl r-cran-testthat r-cran-xml2 r-cran-rmysql r-cran-unitizer r-cran-forcats r-cran-r.utils r-cran-waldo r-cran-markdown r-cran-cairo r-cran-ragg r-cran-magick r-cran-sf r-cran-httr r-cran-r.rsp r-cran-lintr r-cran-tidyverse r-cran-getopt r-cran-bit64 r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-survival r-cran-units r-cran-vdiffr r-cran-purrr r-cran-roxygen2 r-cran-inline r-cran-xml r-cran-usethis r-cran-spelling r-cran-svglite r-cran-dichromat r-cran-bench r-cran-blob r-cran-brio r-cran-here r-cran-hms r-cran-pkgbuild r-cran-pkgload r-cran-tidyr r-cran-pkgdown r-cran-zeallot r-cran-codetools r-cran-remotes r-cran-plm r-cran-zoo Recommended packages: devscripts cme git-buildpackage curl | wget | lynx bzip2-doc libclass-c3-xs-perl libdevel-lexalias-perl libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs node-jquery libldap-common libdevel-partialdump-perl libpng-tools publicsuffix librsvg2-common libsasl2-modules libltdl-dev libmail-sendmail-perl r-recommended r-doc-html r-cran-curl r-cran-testthat r-cran-thematic r-cran-mockery r-cran-future r-cran-testit w3m | www-browser r-cran-covr r-cran-dplyr r-cran-spelling r-cran-hexbin r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp r-cran-profvis r-cran-quantreg r-cran-ragg r-cran-rpart r-cran-sf r-cran-svglite r-cran-vdiffr r-cran-xml2 r-cran-markdown r-cran-sp r-cran-codetools r-cran-formatr r-cran-gridsvg r-cran-jpeg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-webshot r-cran-rstudioapi node-highlight.js r-cran-lubridate r-cran-dygraphs r-cran-rsconnect r-cran-downlit r-cran-bit64 r-cran-hms r-cran-cairo r-cran-data.table r-cran-rsqlite r-cran-mockr r-cran-formattable r-cran-generics r-cran-waldo libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev dctrl-tools debhelper debugedit dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax fonts-noto-core fonts-noto-mono gettext gettext-base gfortran gfortran-13 groff-base icu-devtools intltool-debian javascript-common libalgorithm-c3-perl libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl libblas-dev libblas3 libboost1.81-dev libbrotli1 libbsd0 libbz2-dev libcairo-gobject2 libcairo2 libclass-c3-perl libclass-load-perl libclass-load-xs-perl libclone-perl libcurl3-gnutls libcurl4 libdata-optlist-perl libdatrie1 libdebhelper-perl libdeflate0 libdevel-callchecker-perl libdevel-globaldestruction-perl libdevel-overloadinfo-perl libdevel-stacktrace-perl libdist-checkconflicts-perl libdw1 libdynaloader-functions-perl libelf1 libencode-locale-perl libeval-closure-perl libexpat1 libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran-13-dev libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhttp-date-perl libhttp-message-perl libice6 libicu-dev libicu72 libio-html-perl libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 libldap2 liblerc4 liblua5.3-0 liblwp-mediatypes-perl liblzma-dev libmagic-mgc libmagic1 libmodule-implementation-perl libmodule-runtime-conflicts-perl libmodule-runtime-perl libmoose-perl libmro-compat-perl libnamespace-clean-perl libncurses-dev libncurses6 libnghttp2-14 libpackage-deprecationmanager-perl libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl libparams-util-perl libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpipeline1 libpixman-1-0 libpkgconf3 libpng-dev libpsl5 libreadline-dev librsvg2-2 librtmp1 libsasl2-2 libsasl2-modules-db libsharpyuv0 libsm6 libssh-4 libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff6 libtimedate-perl libtk8.6 libtool libtry-tiny-perl libuchardet0 liburi-perl libuv1 libvariable-magic-perl libwebp7 libwww-curl-perl libwww-curl-simple-perl libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 libyaml-0-2 m4 man-db node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data pkg-config pkgconf pkgconf-bin po-debconf r-base-core r-base-dev r-bioc-biocgenerics r-bioc-chemminer r-cran-base64enc r-cran-bh r-cran-bitops r-cran-bslib r-cran-cachem r-cran-cli r-cran-colorspace r-cran-commonmark r-cran-crayon r-cran-crosstalk r-cran-dbi r-cran-digest r-cran-dt r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fontawesome r-cran-fs r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-png r-cran-promises r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsvg r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-tibble r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml sbuild-build-depends-main-dummy shared-mime-info ucf unzip x11-common xauth xdg-utils zip zlib1g-dev 0 upgraded, 284 newly installed, 0 to remove and 0 not upgraded. Need to get 206 MB of archives. After this operation, 797 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [704 B] Get:2 http://ftpmaster.internal/ubuntu noble/main armhf libbsd0 armhf 0.11.7-4 [36.9 kB] Get:3 http://ftpmaster.internal/ubuntu noble/main armhf libelf1 armhf 0.189-4 [48.7 kB] Get:4 http://ftpmaster.internal/ubuntu noble/main armhf libexpat1 armhf 2.5.0-2 [63.7 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf libfribidi0 armhf 1.0.13-3 [24.0 kB] Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libglib2.0-0 armhf 2.78.1-1 [1395 kB] Get:7 http://ftpmaster.internal/ubuntu noble/main armhf libicu72 armhf 72.1-3ubuntu3 [10.5 MB] Get:8 http://ftpmaster.internal/ubuntu noble/main armhf libxml2 armhf 2.9.14+dfsg-1.3 [591 kB] Get:9 http://ftpmaster.internal/ubuntu noble/main armhf libyaml-0-2 armhf 0.2.5-1 [46.4 kB] Get:10 http://ftpmaster.internal/ubuntu noble/main armhf shared-mime-info armhf 2.2-1 [457 kB] Get:11 http://ftpmaster.internal/ubuntu noble/main armhf ucf all 3.0043+nmu1 [56.5 kB] Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libmagic-mgc armhf 1:5.45-2 [307 kB] Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libmagic1 armhf 1:5.45-2 [80.9 kB] Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main armhf file armhf 1:5.45-2 [21.1 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main armhf gettext-base armhf 0.21-13 [37.5 kB] Get:16 http://ftpmaster.internal/ubuntu noble/main armhf libuchardet0 armhf 0.0.7-1build2 [75.7 kB] Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main armhf groff-base armhf 1.23.0-3 [948 kB] Get:18 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libncurses6 armhf 6.4+20231016-1 [87.8 kB] Get:19 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libnghttp2-14 armhf 1.57.0-1 [67.8 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main armhf libpipeline1 armhf 1.5.7-1 [26.2 kB] Get:21 http://ftpmaster.internal/ubuntu noble/main armhf libpsl5 armhf 0.21.2-1 [57.6 kB] Get:22 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libuv1 armhf 1.46.0-2 [80.3 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main armhf libxau6 armhf 1:1.0.9-1build5 [6622 B] Get:24 http://ftpmaster.internal/ubuntu noble/main armhf libxdmcp6 armhf 1:1.1.3-0ubuntu5 [9452 B] Get:25 http://ftpmaster.internal/ubuntu noble/main armhf libxcb1 armhf 1.15-1 [45.4 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main armhf libx11-data all 2:1.8.6-1ubuntu1 [116 kB] Get:27 http://ftpmaster.internal/ubuntu noble/main armhf libx11-6 armhf 2:1.8.6-1ubuntu1 [586 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main armhf libxext6 armhf 2:1.3.4-1build1 [26.4 kB] Get:29 http://ftpmaster.internal/ubuntu noble/main armhf libxmuu1 armhf 2:1.1.3-3 [9288 B] Get:30 http://ftpmaster.internal/ubuntu noble-proposed/main armhf man-db armhf 2.12.0-1 [1195 kB] Get:31 http://ftpmaster.internal/ubuntu noble/main armhf xauth armhf 1:1.1.2-1 [22.9 kB] Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main armhf m4 armhf 1.4.19-4 [235 kB] Get:33 http://ftpmaster.internal/ubuntu noble/main armhf autoconf all 2.71-3 [339 kB] Get:34 http://ftpmaster.internal/ubuntu noble/main armhf autotools-dev all 20220109.1 [44.9 kB] Get:35 http://ftpmaster.internal/ubuntu noble/main armhf automake all 1:1.16.5-1.3 [558 kB] Get:36 http://ftpmaster.internal/ubuntu noble/main armhf autopoint all 0.21-13 [422 kB] Get:37 http://ftpmaster.internal/ubuntu noble/main armhf dctrl-tools armhf 2.24-3build2 [57.2 kB] Get:38 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libdebhelper-perl all 13.11.7ubuntu1 [85.8 kB] Get:39 http://ftpmaster.internal/ubuntu noble/main armhf libtool all 2.4.7-7 [166 kB] Get:40 http://ftpmaster.internal/ubuntu noble/main armhf dh-autoreconf all 20 [16.1 kB] Get:41 http://ftpmaster.internal/ubuntu noble/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] Get:42 http://ftpmaster.internal/ubuntu noble/main armhf libsub-override-perl all 0.09-4 [8706 B] Get:43 http://ftpmaster.internal/ubuntu noble/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [18.1 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main armhf dh-strip-nondeterminism all 1.13.1-1 [5362 B] Get:45 http://ftpmaster.internal/ubuntu noble/main armhf libdw1 armhf 0.189-4 [233 kB] Get:46 http://ftpmaster.internal/ubuntu noble/main armhf debugedit armhf 1:5.0-5 [42.8 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main armhf dwz armhf 0.15-1 [109 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main armhf gettext armhf 0.21-13 [801 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main armhf po-debconf all 1.0.21+nmu1 [233 kB] Get:51 http://ftpmaster.internal/ubuntu noble-proposed/main armhf debhelper all 13.11.7ubuntu1 [940 kB] Get:52 http://ftpmaster.internal/ubuntu noble/main armhf zip armhf 3.0-13 [162 kB] Get:53 http://ftpmaster.internal/ubuntu noble/main armhf unzip armhf 6.0-28ubuntu1 [162 kB] Get:54 http://ftpmaster.internal/ubuntu noble/main armhf libpaper1 armhf 1.1.29 [12.5 kB] Get:55 http://ftpmaster.internal/ubuntu noble/main armhf libpaper-utils armhf 1.1.29 [8170 B] Get:56 http://ftpmaster.internal/ubuntu noble/main armhf xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] Get:57 http://ftpmaster.internal/ubuntu noble/main armhf libblas3 armhf 3.11.0-2build1 [123 kB] Get:58 http://ftpmaster.internal/ubuntu noble/main armhf libbrotli1 armhf 1.0.9-2build8 [296 kB] Get:59 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libfreetype6 armhf 2.13.2+dfsg-1 [331 kB] Get:60 http://ftpmaster.internal/ubuntu noble/main armhf fonts-noto-mono all 20201225-2 [435 kB] Get:61 http://ftpmaster.internal/ubuntu noble/main armhf fonts-noto-core all 20201225-2 [13.3 MB] Get:62 http://ftpmaster.internal/ubuntu noble/main armhf fontconfig-config armhf 2.14.2-4ubuntu1 [35.8 kB] Get:63 http://ftpmaster.internal/ubuntu noble/main armhf libfontconfig1 armhf 2.14.2-4ubuntu1 [112 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main armhf libpixman-1-0 armhf 0.42.2-1 [184 kB] Get:65 http://ftpmaster.internal/ubuntu noble/main armhf libxcb-render0 armhf 1.15-1 [15.2 kB] Get:66 http://ftpmaster.internal/ubuntu noble/main armhf libxcb-shm0 armhf 1.15-1 [5852 B] Get:67 http://ftpmaster.internal/ubuntu noble/main armhf libxrender1 armhf 1:0.9.10-1.1 [16.5 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main armhf libcairo2 armhf 1.18.0-1 [481 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-3 [18.9 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-2 armhf 2.1.28+dfsg1-3 [49.6 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main armhf libldap2 armhf 2.6.6+dfsg-1~exp1ubuntu1 [170 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build4 [52.8 kB] Get:73 http://ftpmaster.internal/ubuntu noble/main armhf libssh-4 armhf 0.10.5-3ubuntu1 [166 kB] Get:74 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libcurl4 armhf 8.2.1-1ubuntu3.1 [280 kB] Get:75 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg-turbo8 armhf 2.1.5-2ubuntu1 [123 kB] Get:76 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] Get:77 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgfortran5 armhf 13.2.0-6ubuntu1 [300 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main armhf liblapack3 armhf 3.11.0-2build1 [1988 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main armhf fontconfig armhf 2.14.2-4ubuntu1 [189 kB] Get:80 http://ftpmaster.internal/ubuntu noble/main armhf libgraphite2-3 armhf 1.3.14-1build2 [65.2 kB] Get:81 http://ftpmaster.internal/ubuntu noble/main armhf libharfbuzz0b armhf 8.0.1-1 [433 kB] Get:82 http://ftpmaster.internal/ubuntu noble/main armhf libthai-data all 0.1.29-1build1 [162 kB] Get:83 http://ftpmaster.internal/ubuntu noble/main armhf libdatrie1 armhf 0.2.13-2 [16.8 kB] Get:84 http://ftpmaster.internal/ubuntu noble/main armhf libthai0 armhf 0.1.29-1build1 [15.8 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main armhf libpango-1.0-0 armhf 1.51.0+ds-2 [206 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main armhf libpangoft2-1.0-0 armhf 1.51.0+ds-2 [36.1 kB] Get:87 http://ftpmaster.internal/ubuntu noble/main armhf libpangocairo-1.0-0 armhf 1.51.0+ds-2 [25.3 kB] Get:88 http://ftpmaster.internal/ubuntu noble/main armhf libtcl8.6 armhf 8.6.13+dfsg-2 [902 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main armhf libdeflate0 armhf 1.18-1 [40.7 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main armhf libjbig0 armhf 2.1-6.1ubuntu1 [24.9 kB] Get:91 http://ftpmaster.internal/ubuntu noble/main armhf liblerc4 armhf 4.0.0+ds-2ubuntu2 [151 kB] Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsharpyuv0 armhf 1.3.2-0.3 [13.3 kB] Get:93 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libwebp7 armhf 1.3.2-0.3 [183 kB] Get:94 http://ftpmaster.internal/ubuntu noble/main armhf libtiff6 armhf 4.5.1+git230720-1ubuntu1 [177 kB] Get:95 http://ftpmaster.internal/ubuntu noble/main armhf libxft2 armhf 2.3.6-1 [36.8 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main armhf x11-common all 1:7.7+23ubuntu2 [23.4 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main armhf libxss1 armhf 1:1.2.3-1build2 [7580 B] Get:98 http://ftpmaster.internal/ubuntu noble/main armhf libtk8.6 armhf 8.6.13-2 [680 kB] Get:99 http://ftpmaster.internal/ubuntu noble/main armhf libice6 armhf 2:1.0.10-1build2 [36.4 kB] Get:100 http://ftpmaster.internal/ubuntu noble/main armhf libsm6 armhf 2:1.2.3-1build2 [15.1 kB] Get:101 http://ftpmaster.internal/ubuntu noble/main armhf libxt6 armhf 1:1.2.1-1.1 [142 kB] Get:102 http://ftpmaster.internal/ubuntu noble/universe armhf r-base-core armhf 4.3.1-4 [26.6 MB] Get:103 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgfortran-13-dev armhf 13.2.0-6ubuntu1 [359 kB] Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gfortran-13 armhf 13.2.0-6ubuntu1 [8800 kB] Get:105 http://ftpmaster.internal/ubuntu noble/main armhf gfortran armhf 4:13.2.0-1ubuntu1 [1174 B] Get:106 http://ftpmaster.internal/ubuntu noble/main armhf libblas-dev armhf 3.11.0-2build1 [132 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main armhf liblapack-dev armhf 3.11.0-2build1 [2059 kB] Get:108 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libncurses-dev armhf 6.4+20231016-1 [342 kB] Get:109 http://ftpmaster.internal/ubuntu noble/main armhf libreadline-dev armhf 8.2-1.3 [152 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg-turbo8-dev armhf 2.1.5-2ubuntu1 [263 kB] Get:111 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg8-dev armhf 8c-2ubuntu11 [1484 B] Get:112 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg-dev armhf 8c-2ubuntu11 [1482 B] Get:113 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-16-0 armhf 10.42-4 [180 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-32-0 armhf 10.42-4 [170 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-posix3 armhf 10.42-4 [6094 B] Get:116 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-dev armhf 10.42-4 [664 kB] Get:117 http://ftpmaster.internal/ubuntu noble/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-1ubuntu5 [880 kB] Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libpng-dev armhf 1.6.40-2 [248 kB] Get:119 http://ftpmaster.internal/ubuntu noble/main armhf libbz2-dev armhf 1.0.8-5build1 [29.8 kB] Get:120 http://ftpmaster.internal/ubuntu noble-proposed/main armhf liblzma-dev armhf 5.4.4-0.1 [166 kB] Get:121 http://ftpmaster.internal/ubuntu noble/main armhf icu-devtools armhf 72.1-3ubuntu3 [199 kB] Get:122 http://ftpmaster.internal/ubuntu noble/main armhf libicu-dev armhf 72.1-3ubuntu3 [11.6 MB] Get:123 http://ftpmaster.internal/ubuntu noble/main armhf libpkgconf3 armhf 1.8.1-2 [26.3 kB] Get:124 http://ftpmaster.internal/ubuntu noble/main armhf pkgconf-bin armhf 1.8.1-2 [20.6 kB] Get:125 http://ftpmaster.internal/ubuntu noble/main armhf pkgconf armhf 1.8.1-2 [16.7 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main armhf pkg-config armhf 1.8.1-2 [7170 B] Get:127 http://ftpmaster.internal/ubuntu noble/universe armhf r-base-dev all 4.3.1-4 [4332 B] Get:128 http://ftpmaster.internal/ubuntu noble/main armhf libfile-which-perl all 1.27-2 [12.5 kB] Get:129 http://ftpmaster.internal/ubuntu noble/universe armhf libswitch-perl all 2.17-3 [18.9 kB] Get:130 http://ftpmaster.internal/ubuntu noble/main armhf libclone-perl armhf 0.46-1 [10.0 kB] Get:131 http://ftpmaster.internal/ubuntu noble/main armhf libencode-locale-perl all 1.05-3 [11.6 kB] Get:132 http://ftpmaster.internal/ubuntu noble/main armhf libtimedate-perl all 2.3300-2 [34.0 kB] Get:133 http://ftpmaster.internal/ubuntu noble/main armhf libhttp-date-perl all 6.05-2 [9946 B] Get:134 http://ftpmaster.internal/ubuntu noble/main armhf libio-html-perl all 1.004-3 [15.9 kB] Get:135 http://ftpmaster.internal/ubuntu noble/main armhf liblwp-mediatypes-perl all 6.04-2 [20.1 kB] Get:136 http://ftpmaster.internal/ubuntu noble-proposed/main armhf liburi-perl all 5.21-1 [85.4 kB] Get:137 http://ftpmaster.internal/ubuntu noble/main armhf libhttp-message-perl all 6.44-2ubuntu1 [78.0 kB] Get:138 http://ftpmaster.internal/ubuntu noble/main armhf libparams-util-perl armhf 1.102-2 [20.5 kB] Get:139 http://ftpmaster.internal/ubuntu noble/main armhf libsub-install-perl all 0.929-1 [9764 B] Get:140 http://ftpmaster.internal/ubuntu noble/main armhf libdata-optlist-perl all 0.114-1 [9708 B] Get:141 http://ftpmaster.internal/ubuntu noble/main armhf libb-hooks-op-check-perl armhf 0.22-2build1 [9160 B] Get:142 http://ftpmaster.internal/ubuntu noble/main armhf libdynaloader-functions-perl all 0.003-3 [12.1 kB] Get:143 http://ftpmaster.internal/ubuntu noble/main armhf libdevel-callchecker-perl armhf 0.008-2 [13.6 kB] Get:144 http://ftpmaster.internal/ubuntu noble/main armhf libparams-classify-perl armhf 0.015-2build2 [19.4 kB] Get:145 http://ftpmaster.internal/ubuntu noble/main armhf libmodule-runtime-perl all 0.016-2 [16.4 kB] Get:146 http://ftpmaster.internal/ubuntu noble/main armhf libtry-tiny-perl all 0.31-2 [20.8 kB] Get:147 http://ftpmaster.internal/ubuntu noble/main armhf libmodule-implementation-perl all 0.09-2 [12.0 kB] Get:148 http://ftpmaster.internal/ubuntu noble/main armhf libpackage-stash-perl all 0.40-1 [19.5 kB] Get:149 http://ftpmaster.internal/ubuntu noble/universe armhf libclass-load-perl all 0.25-2 [12.7 kB] Get:150 http://ftpmaster.internal/ubuntu noble/universe armhf libclass-load-xs-perl armhf 0.10-2build1 [13.1 kB] Get:151 http://ftpmaster.internal/ubuntu noble/main armhf libsub-exporter-progressive-perl all 0.001013-3 [6718 B] Get:152 http://ftpmaster.internal/ubuntu noble/universe armhf libdevel-globaldestruction-perl all 0.14-4 [6114 B] Get:153 http://ftpmaster.internal/ubuntu noble/universe armhf libalgorithm-c3-perl all 0.11-2 [10.2 kB] Get:154 http://ftpmaster.internal/ubuntu noble/universe armhf libclass-c3-perl all 0.35-2 [18.4 kB] Get:155 http://ftpmaster.internal/ubuntu noble/universe armhf libmro-compat-perl all 0.15-2 [10.1 kB] Get:156 http://ftpmaster.internal/ubuntu noble/universe armhf libdevel-overloadinfo-perl all 0.007-1 [7422 B] Get:157 http://ftpmaster.internal/ubuntu noble/main armhf libdevel-stacktrace-perl all 2.0400-2 [22.2 kB] Get:158 http://ftpmaster.internal/ubuntu noble/main armhf libsub-exporter-perl all 0.990-1 [49.0 kB] Get:159 http://ftpmaster.internal/ubuntu noble/universe armhf libeval-closure-perl all 0.14-3 [10.1 kB] Get:160 http://ftpmaster.internal/ubuntu noble/universe armhf libdist-checkconflicts-perl all 0.11-2 [9942 B] Get:161 http://ftpmaster.internal/ubuntu noble/universe armhf libmodule-runtime-conflicts-perl all 0.003-2 [6956 B] Get:162 http://ftpmaster.internal/ubuntu noble/universe armhf libpackage-deprecationmanager-perl all 0.18-1 [16.7 kB] Get:163 http://ftpmaster.internal/ubuntu noble/main armhf libpackage-stash-xs-perl armhf 0.30-1build1 [17.2 kB] Get:164 http://ftpmaster.internal/ubuntu noble/universe armhf libmoose-perl armhf 2.2206-1 [748 kB] Get:165 http://ftpmaster.internal/ubuntu noble/main armhf libvariable-magic-perl armhf 0.63-1 [32.2 kB] Get:166 http://ftpmaster.internal/ubuntu noble/main armhf libb-hooks-endofscope-perl all 0.26-1 [17.8 kB] Get:167 http://ftpmaster.internal/ubuntu noble/main armhf libsub-identify-perl armhf 0.14-3 [9386 B] Get:168 http://ftpmaster.internal/ubuntu noble/main armhf libsub-name-perl armhf 0.27-1 [10.3 kB] Get:169 http://ftpmaster.internal/ubuntu noble/main armhf libnamespace-clean-perl all 0.27-2 [14.0 kB] Get:170 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libcurl3-gnutls armhf 8.2.1-1ubuntu3.1 [275 kB] Get:171 http://ftpmaster.internal/ubuntu noble/universe armhf libwww-curl-perl armhf 4.17-10 [54.7 kB] Get:172 http://ftpmaster.internal/ubuntu noble/universe armhf libwww-curl-simple-perl all 0.100191-3 [11.2 kB] Get:173 http://ftpmaster.internal/ubuntu noble/universe armhf dh-r all 20230707ubuntu1 [39.1 kB] Get:174 http://ftpmaster.internal/ubuntu noble/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] Get:175 http://ftpmaster.internal/ubuntu noble/universe armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] Get:176 http://ftpmaster.internal/ubuntu noble/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] Get:177 http://ftpmaster.internal/ubuntu noble/main armhf javascript-common all 11+nmu1 [5936 B] Get:178 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libboost1.81-dev armhf 1.81.0-7 [10.5 MB] Get:179 http://ftpmaster.internal/ubuntu noble/main armhf libcairo-gobject2 armhf 1.18.0-1 [125 kB] Get:180 http://ftpmaster.internal/ubuntu noble/main armhf libgdk-pixbuf2.0-common all 2.42.10+dfsg-1build1 [5496 B] Get:181 http://ftpmaster.internal/ubuntu noble/main armhf libgdk-pixbuf-2.0-0 armhf 2.42.10+dfsg-1build1 [133 kB] Get:182 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] Get:183 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-popper.js all 1.16.1+ds-6 [54.1 kB] Get:184 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] Get:185 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-d3 all 3.5.17-4 [132 kB] Get:186 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-es5-shim all 4.6.7-2 [39.8 kB] Get:187 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] Get:188 http://ftpmaster.internal/ubuntu noble/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] Get:189 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] Get:190 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] Get:191 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] Get:192 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] Get:193 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] Get:194 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] Get:195 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] Get:196 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] Get:197 http://ftpmaster.internal/ubuntu noble/universe armhf liblua5.3-0 armhf 5.3.6-2 [109 kB] Get:198 http://ftpmaster.internal/ubuntu noble/main armhf librsvg2-2 armhf 2.54.7+dfsg-2 [2630 kB] Get:199 http://ftpmaster.internal/ubuntu noble/universe armhf node-bootstrap-sass all 3.4.3-2 [187 kB] Get:200 http://ftpmaster.internal/ubuntu noble/universe armhf node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] Get:201 http://ftpmaster.internal/ubuntu noble/universe armhf node-normalize.css all 8.0.1-5 [10.8 kB] Get:202 http://ftpmaster.internal/ubuntu noble/universe armhf pandoc-data all 2.17.1.1-3ubuntu1 [82.9 kB] Get:203 http://ftpmaster.internal/ubuntu noble/universe armhf pandoc armhf 2.17.1.1-3ubuntu1 [29.0 MB] Get:204 http://ftpmaster.internal/ubuntu noble/universe armhf r-bioc-biocgenerics all 0.46.0-1 [591 kB] Get:205 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-littler armhf 0.3.18-2 [86.9 kB] Get:206 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rjson armhf 0.2.21-1 [142 kB] Get:207 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-bitops armhf 1.0-7-1 [29.4 kB] Get:208 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rcurl armhf 1.98-1.12+dfsg-1 [790 kB] Get:209 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-dbi all 1.1.3-1 [686 kB] Get:210 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-digest armhf 0.6.33-1 [180 kB] Get:211 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-pkgkitten all 0.2.3-1 [25.1 kB] Get:212 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rcpp armhf 1.0.11-1 [1958 kB] Get:213 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-cli armhf 3.6.1-1 [1308 kB] Get:214 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-glue armhf 1.6.2-1 [147 kB] Get:215 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rlang armhf 1.1.1-1 [1646 kB] Get:216 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-lifecycle all 1.0.3+dfsg-1 [109 kB] Get:217 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-gtable all 0.3.4+dfsg-1 [191 kB] Get:218 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-isoband armhf 0.2.7-1 [1477 kB] Get:219 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-mass armhf 7.3-60-2 [1116 kB] Get:220 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-lattice armhf 0.22-5-1 [1341 kB] Get:221 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-nlme armhf 3.1.163-1 [2253 kB] Get:222 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-matrix armhf 1.6-1-1 [3798 kB] Get:223 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-mgcv armhf 1.9-0-1 [3163 kB] Get:224 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-farver armhf 2.1.1-1 [1346 kB] Get:225 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-labeling all 0.4.3-1 [62.1 kB] Get:226 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-colorspace armhf 2.1-0+dfsg-1 [1538 kB] Get:227 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-munsell all 0.5.0-2build1 [208 kB] Get:228 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-r6 all 2.5.1-1 [99.0 kB] Get:229 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] Get:230 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-viridislite all 0.4.2-2 [1088 kB] Get:231 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-scales all 1.2.1-1 [544 kB] Get:232 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-fansi armhf 1.0.4-1 [610 kB] Get:233 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-magrittr armhf 2.0.3-1 [154 kB] Get:234 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-utf8 armhf 1.2.3-1 [137 kB] Get:235 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-vctrs armhf 0.6.3-1 [1307 kB] Get:236 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-pillar all 1.9.0+dfsg-1 [464 kB] Get:237 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] Get:238 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-tibble armhf 3.2.1+dfsg-2 [415 kB] Get:239 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-withr all 2.5.0-1 [225 kB] Get:240 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] Get:241 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-gridextra all 2.3-3build1 [1024 kB] Get:242 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-png armhf 0.1-8-1 [39.6 kB] Get:243 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-base64enc armhf 0.1-3-3 [27.3 kB] Get:244 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-fastmap armhf 1.1.1-1 [68.1 kB] Get:245 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-ellipsis armhf 0.3.2-2 [35.0 kB] Get:246 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-htmltools armhf 0.5.5-1 [361 kB] Get:247 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-jsonlite armhf 1.8.5+dfsg-1 [437 kB] Get:248 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-yaml armhf 2.3.7-1 [96.7 kB] Get:249 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-evaluate all 0.22-1 [95.9 kB] Get:250 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-xfun armhf 0.39+dfsg-1 [413 kB] Get:251 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-highr all 0.10+dfsg-1 [38.3 kB] Get:252 http://ftpmaster.internal/ubuntu noble/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] Get:253 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-knitr all 1.44+dfsg-1 [913 kB] Get:254 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-cachem armhf 1.0.8-1 [72.0 kB] Get:255 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] Get:256 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-memoise all 2.0.1-1 [53.9 kB] Get:257 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-mime armhf 0.12-1 [35.5 kB] Get:258 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-fs armhf 1.6.3+dfsg-1 [226 kB] Get:259 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rappdirs armhf 0.3.3-1 [47.4 kB] Get:260 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-sass armhf 0.4.7+dfsg-1 [920 kB] Get:261 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-bslib all 0.5.1+dfsg-1 [4628 kB] Get:262 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-fontawesome all 0.5.2-1 [1300 kB] Get:263 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-stringi armhf 1.7.12-1build1 [850 kB] Get:264 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-stringr all 1.5.0-1 [290 kB] Get:265 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-tinytex all 0.48-1 [138 kB] Get:266 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] Get:267 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-later armhf 1.3.1+dfsg-1 [115 kB] Get:268 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-promises armhf 1.2.0.1+dfsg-1 [278 kB] Get:269 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-httpuv armhf 1.6.11+dfsg-1 [472 kB] Get:270 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-xtable all 1:1.8-4-2 [689 kB] Get:271 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-sourcetools armhf 0.1.7-1-1 [45.7 kB] Get:272 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-crayon all 1.5.2-1 [164 kB] Get:273 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-commonmark armhf 1.9.0-1 [109 kB] Get:274 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] Get:275 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-shiny all 1.7.5.1+dfsg-1 [2724 kB] Get:276 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-rmarkdown all 2.25+dfsg-1 [1480 kB] Get:277 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-htmlwidgets all 1.6.2+dfsg-1 [120 kB] Get:278 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-lazyeval armhf 0.2.2-1build1 [142 kB] Get:279 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-crosstalk all 1.2.0+dfsg-1 [175 kB] Get:280 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-dt all 0.30+dfsg-2 [239 kB] Get:281 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rsvg armhf 2.4.0-1 [269 kB] Get:282 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-bh all 1.81.0-1 [5814 B] Get:283 http://ftpmaster.internal/ubuntu noble/universe armhf r-bioc-chemminer armhf 3.52.0+dfsg-1 [1175 kB] Get:284 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-runit all 0.4.32-3 [283 kB] Preconfiguring packages ... Fetched 206 MB in 20s (10.3 MB/s) Selecting previously unselected package libbsd0:armhf. (Reading database ... 13353 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.11.7-4_armhf.deb ... Unpacking libbsd0:armhf (0.11.7-4) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../001-libelf1_0.189-4_armhf.deb ... Unpacking libelf1:armhf (0.189-4) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../002-libexpat1_2.5.0-2_armhf.deb ... Unpacking libexpat1:armhf (2.5.0-2) ... Selecting previously unselected package libfribidi0:armhf. Preparing to unpack .../003-libfribidi0_1.0.13-3_armhf.deb ... Unpacking libfribidi0:armhf (1.0.13-3) ... Selecting previously unselected package libglib2.0-0:armhf. Preparing to unpack .../004-libglib2.0-0_2.78.1-1_armhf.deb ... Unpacking libglib2.0-0:armhf (2.78.1-1) ... Selecting previously unselected package libicu72:armhf. 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Setting up libpcre2-posix3:armhf (10.42-4) ... Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... Setting up libuchardet0:armhf (0.0.7-1build2) ... Setting up liblua5.3-0:armhf (5.3.6-2) ... Setting up libsub-override-perl (0.09-4) ... Setting up libharfbuzz0b:armhf (8.0.1-1) ... Setting up libthai-data (0.1.29-1build1) ... Setting up libdevel-globaldestruction-perl (0.14-4) ... Setting up node-bootstrap-sass (3.4.3-2) ... Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... Setting up pandoc-data (2.17.1.1-3ubuntu1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libgfortran-13-dev:armhf (13.2.0-6ubuntu1) ... Setting up libbsd0:armhf (0.11.7-4) ... Setting up node-normalize.css (8.0.1-5) ... Setting up libelf1:armhf (0.189-4) ... Setting up libicu-dev:armhf (72.1-3ubuntu3) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3) ... Setting up fonts-noto-core (20201225-2) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up xdg-utils (1.1.3-4.1ubuntu3) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libldap2:armhf (2.6.6+dfsg-1~exp1ubuntu1) ... Setting up liburi-perl (5.21-1) ... Setting up libblas-dev:armhf (3.11.0-2build1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode Setting up dctrl-tools (2.24-3build2) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libbz2-dev:armhf (1.0.8-5build1) ... Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... Setting up libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... Setting up libjpeg8:armhf (8c-2ubuntu11) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up r-cran-bh (1.81.0-1) ... Setting up libpaper1:armhf (1.1.29) ... Creating config file /etc/papersize with new version Setting up libice6:armhf (2:1.0.10-1build2) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libdw1:armhf (0.189-4) ... Setting up libjpeg-turbo8-dev:armhf (2.1.5-2ubuntu1) ... Setting up libxdmcp6:armhf (1:1.1.3-0ubuntu5) ... Setting up liblapack3:armhf (3.11.0-2build1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libncurses-dev:armhf (6.4+20231016-1) ... Setting up libxcb1:armhf (1.15-1) ... Setting up gettext (0.21-13) ... Setting up libpcre2-dev:armhf (10.42-4) ... Setting up libtool (2.4.7-7) ... Setting up libxcb-render0:armhf (1.15-1) ... Setting up fontconfig-config (2.14.2-4ubuntu1) ... Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... Setting up libpng-dev:armhf (1.6.40-2) ... Setting up libcurl3-gnutls:armhf (8.2.1-1ubuntu3.1) ... Setting up libxcb-shm0:armhf (1.15-1) ... Setting up libpaper-utils (1.1.29) ... Setting up libclass-c3-perl (0.35-2) ... Setting up libreadline-dev:armhf (8.2-1.3) ... Setting up libdevel-callchecker-perl:armhf (0.008-2) ... Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... Setting up pkgconf:armhf (1.8.1-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libthai0:armhf (0.1.29-1build1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up pandoc (2.17.1.1-3ubuntu1) ... Setting up gfortran-13 (13.2.0-6ubuntu1) ... Setting up shared-mime-info (2.2-1) ... Setting up liblapack-dev:armhf (3.11.0-2build1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode Setting up libdata-optlist-perl (0.114-1) ... Setting up pkg-config:armhf (1.8.1-2) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up libtiff6:armhf (4.5.1+git230720-1ubuntu1) ... Setting up debugedit (1:5.0-5) ... Setting up libcurl4:armhf (8.2.1-1ubuntu3.1) ... Setting up libx11-6:armhf (2:1.8.6-1ubuntu1) ... Setting up libgdk-pixbuf-2.0-0:armhf (2.42.10+dfsg-1build1) ... Setting up libfontconfig1:armhf (2.14.2-4ubuntu1) ... Setting up libmro-compat-perl (0.15-2) ... Setting up libjpeg8-dev:armhf (8c-2ubuntu11) ... Setting up libsm6:armhf (2:1.2.3-1build2) ... Setting up libxmuu1:armhf (2:1.1.3-3) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.44-2ubuntu1) ... Setting up libeval-closure-perl (0.14-3) ... Setting up fontconfig (2.14.2-4ubuntu1) ... Regenerating fonts cache... done. Setting up libxrender1:armhf (1:0.9.10-1.1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libparams-classify-perl:armhf (0.015-2build2) ... Setting up libpango-1.0-0:armhf (1.51.0+ds-2) ... Setting up libjpeg-dev:armhf (8c-2ubuntu11) ... Setting up libxext6:armhf (2:1.3.4-1build1) ... Setting up libwww-curl-perl:armhf (4.17-10) ... Setting up man-db (2.12.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up gfortran (4:13.2.0-1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:armhf (1.18.0-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libdist-checkconflicts-perl (0.11-2) ... Setting up libxt6:armhf (1:1.2.1-1.1) ... Setting up xauth (1:1.1.2-1) ... Setting up libcairo-gobject2:armhf (1.18.0-1) ... Setting up libxss1:armhf (1:1.2.3-1build2) ... Setting up libpangoft2-1.0-0:armhf (1.51.0+ds-2) ... Setting up libpangocairo-1.0-0:armhf (1.51.0+ds-2) ... Setting up libxft2:armhf (2.3.6-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libtk8.6:armhf (8.6.13-2) ... Setting up debhelper (13.11.7ubuntu1) ... Setting up libmodule-runtime-conflicts-perl (0.003-2) ... Setting up libclass-load-perl (0.25-2) ... Setting up librsvg2-2:armhf (2.54.7+dfsg-2) ... Setting up r-base-core (4.3.1-4) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.5.2-1) ... Setting up r-cran-labeling (0.4.3-1) ... Setting up r-cran-sourcetools (0.1.7-1-1) ... Setting up r-cran-rsvg (2.4.0-1) ... Setting up r-cran-lattice (0.22-5-1) ... Setting up r-cran-nlme (3.1.163-1) ... Setting up r-cran-farver (2.1.1-1) ... Setting up libpackage-deprecationmanager-perl (0.18-1) ... Setting up r-cran-viridislite (0.4.2-2) ... Setting up libdevel-overloadinfo-perl (0.007-1) ... Setting up libclass-load-xs-perl (0.10-2build1) ... Setting up r-cran-lazyeval (0.2.2-1build1) ... Setting up r-cran-commonmark (1.9.0-1) ... Setting up r-cran-r6 (2.5.1-1) ... Setting up r-cran-pkgkitten (0.2.3-1) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up r-cran-magrittr (2.0.3-1) ... Setting up r-cran-rappdirs (0.3.3-1) ... Setting up r-cran-littler (0.3.18-2) ... Setting up r-cran-fs (1.6.3+dfsg-1) ... Setting up r-cran-rcpp (1.0.11-1) ... Setting up r-bioc-biocgenerics (0.46.0-1) ... Setting up r-cran-rlang (1.1.1-1) ... Setting up r-base-dev (4.3.1-4) ... Setting up r-cran-xfun (0.39+dfsg-1) ... Setting up r-cran-withr (2.5.0-1) ... Setting up r-cran-mime (0.12-1) ... Setting up libmoose-perl:armhf (2.2206-1) ... Setting up r-cran-base64enc (0.1-3-3) ... Setting up r-cran-digest (0.6.33-1) ... Setting up r-cran-yaml (2.3.7-1) ... Setting up r-cran-evaluate (0.22-1) ... Setting up r-cran-dbi (1.1.3-1) ... Setting up r-cran-highr (0.10+dfsg-1) ... Setting up r-cran-fansi (1.0.4-1) ... Setting up r-cran-mass (7.3-60-2) ... Setting up r-cran-glue (1.6.2-1) ... Setting up r-cran-xtable (1:1.8-4-2) ... Setting up r-cran-cli (3.6.1-1) ... Setting up r-cran-lifecycle (1.0.3+dfsg-1) ... Setting up r-cran-bitops (1.0-7-1) ... Setting up r-cran-fastmap (1.1.1-1) ... Setting up r-cran-png (0.1-8-1) ... Setting up r-cran-jsonlite (1.8.5+dfsg-1) ... Setting up r-cran-pkgconfig (2.0.3-2build1) ... Setting up r-cran-utf8 (1.2.3-1) ... Setting up r-cran-colorspace (2.1-0+dfsg-1) ... Setting up r-cran-stringi (1.7.12-1build1) ... Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... Setting up r-cran-isoband (0.2.7-1) ... Setting up r-cran-runit (0.4.32-3) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up r-cran-gtable (0.3.4+dfsg-1) ... Setting up r-cran-later (1.3.1+dfsg-1) ... Setting up r-cran-matrix (1.6-1-1) ... Setting up r-cran-tinytex (0.48-1) ... Setting up r-cran-knitr (1.44+dfsg-1) ... Setting up r-cran-mgcv (1.9-0-1) ... Setting up r-cran-cachem (1.0.8-1) ... Setting up r-cran-rjson (0.2.21-1) ... Setting up r-cran-rcurl (1.98-1.12+dfsg-1) ... Setting up r-cran-vctrs (0.6.3-1) ... Setting up r-cran-pillar (1.9.0+dfsg-1) ... Setting up r-cran-ellipsis (0.3.2-2) ... Setting up r-cran-stringr (1.5.0-1) ... Setting up libwww-curl-simple-perl (0.100191-3) ... Setting up r-cran-munsell (0.5.0-2build1) ... Setting up r-cran-tibble (3.2.1+dfsg-2) ... Setting up r-cran-gridextra (2.3-3build1) ... Setting up r-cran-scales (1.2.1-1) ... Setting up r-cran-memoise (2.0.1-1) ... Setting up r-cran-promises (1.2.0.1+dfsg-1) ... Setting up r-cran-htmltools (0.5.5-1) ... Setting up r-cran-sass (0.4.7+dfsg-1) ... Setting up dh-r (20230707ubuntu1) ... Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... Setting up r-cran-httpuv (1.6.11+dfsg-1) ... Setting up r-cran-fontawesome (0.5.2-1) ... Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... Setting up r-cran-bslib (0.5.1+dfsg-1) ... Setting up r-cran-shiny (1.7.5.1+dfsg-1) ... Setting up r-cran-rmarkdown (2.25+dfsg-1) ... Setting up r-cran-crosstalk (1.2.0+dfsg-1) ... Setting up r-cran-htmlwidgets (1.6.2+dfsg-1) ... Setting up r-cran-dt (0.30+dfsg-2) ... Setting up r-bioc-chemminer (3.52.0+dfsg-1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.38-3ubuntu1) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-164-generic #181-Ubuntu SMP Fri Sep 1 13:42:23 UTC 2023 arm64 (armv7l) Toolchain package versions: binutils_2.41-5ubuntu1 dpkg-dev_1.22.0ubuntu1 g++-13_13.2.0-6ubuntu1 gcc-13_13.2.0-6ubuntu1 libc6-dev_2.38-3ubuntu1 libstdc++-13-dev_13.2.0-6ubuntu1 libstdc++6_13.2.0-6ubuntu1 linux-libc-dev_6.5.0-9.9 Package versions: adduser_3.137ubuntu1 advancecomp_2.5-1 apt_2.7.6 apt-utils_2.7.6 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13ubuntu3 base-passwd_3.6.2 bash_5.2.15-2ubuntu1 bash-completion_1:2.11-8 binutils_2.41-5ubuntu1 binutils-arm-linux-gnueabihf_2.41-5ubuntu1 binutils-common_2.41-5ubuntu1 bsdextrautils_2.39.1-4ubuntu2 bsdutils_1:2.39.1-4ubuntu2 build-essential_12.10ubuntu1 bzip2_1.0.8-5build1 ca-certificates_20230311ubuntu1 coreutils_9.1-1ubuntu2 cpp_4:13.2.0-1ubuntu1 cpp-13_13.2.0-6ubuntu1 dash_0.5.12-6ubuntu1 dctrl-tools_2.24-3build2 debconf_1.5.82 debconf-i18n_1.5.82 debhelper_13.11.7ubuntu1 debianutils_5.14 debugedit_1:5.0-5 dh-autoreconf_20 dh-r_20230707ubuntu1 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.0ubuntu1 dpkg-dev_1.22.0ubuntu1 dwz_0.15-1 e2fsprogs_1.47.0-2ubuntu1 fakeroot_1.32.1-1 file_1:5.45-2 findutils_4.9.0-5 fontconfig_2.14.2-4ubuntu1 fontconfig-config_2.14.2-4ubuntu1 fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1 fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3 fonts-mathjax_2.7.9+dfsg-1 fonts-noto-core_20201225-2 fonts-noto-mono_20201225-2 g++_4:13.2.0-1ubuntu1 g++-13_13.2.0-6ubuntu1 gcc_4:13.2.0-1ubuntu1 gcc-13_13.2.0-6ubuntu1 gcc-13-base_13.2.0-6ubuntu1 gettext_0.21-13 gettext-base_0.21-13 gfortran_4:13.2.0-1ubuntu1 gfortran-13_13.2.0-6ubuntu1 gpg_2.2.40-1.1ubuntu1 gpg-agent_2.2.40-1.1ubuntu1 gpgconf_2.2.40-1.1ubuntu1 gpgv_2.2.40-1.1ubuntu1 grep_3.11-3 groff-base_1.23.0-3 gzip_1.12-1ubuntu1 hostname_3.23+nmu1ubuntu1 icu-devtools_72.1-3ubuntu3 init_1.65.2ubuntu1 init-system-helpers_1.65.2ubuntu1 intltool-debian_0.35.0+20060710.6 javascript-common_11+nmu1 krb5-locales_1.20.1-3ubuntu1 libacl1_2.3.1-3 libalgorithm-c3-perl_0.11-2 libapparmor1_4.0.0~alpha2-0ubuntu5 libapt-pkg6.0_2.7.6 libarchive-zip-perl_1.68-1 libargon2-1_0~20190702+dfsg-3 libasan8_13.2.0-6ubuntu1 libassuan0_2.5.6-1 libatomic1_13.2.0-6ubuntu1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.1-1 libaudit1_1:3.1.1-1 libb-hooks-endofscope-perl_0.26-1 libb-hooks-op-check-perl_0.22-2build1 libbinutils_2.41-5ubuntu1 libblas-dev_3.11.0-2build1 libblas3_3.11.0-2build1 libblkid1_2.39.1-4ubuntu2 libboost1.81-dev_1.81.0-7 libbrotli1_1.0.9-2build8 libbsd0_0.11.7-4 libbz2-1.0_1.0.8-5build1 libbz2-dev_1.0.8-5build1 libc-bin_2.38-3ubuntu1 libc-dev-bin_2.38-3ubuntu1 libc6_2.38-3ubuntu1 libc6-dev_2.38-3ubuntu1 libcairo-gobject2_1.18.0-1 libcairo2_1.18.0-1 libcap-ng0_0.8.3-1build2 libcap2_1:2.66-4ubuntu1 libcc1-0_13.2.0-6ubuntu1 libclass-c3-perl_0.35-2 libclass-load-perl_0.25-2 libclass-load-xs-perl_0.10-2build1 libclone-perl_0.46-1 libcom-err2_1.47.0-2ubuntu1 libcrypt-dev_1:4.4.36-2 libcrypt1_1:4.4.36-2 libcryptsetup12_2:2.6.1-4ubuntu3 libctf-nobfd0_2.41-5ubuntu1 libctf0_2.41-5ubuntu1 libcurl3-gnutls_8.2.1-1ubuntu3.1 libcurl4_8.2.1-1ubuntu3.1 libdata-optlist-perl_0.114-1 libdatrie1_0.2.13-2 libdb5.3_5.3.28+dfsg2-2 libdebconfclient0_0.270ubuntu1 libdebhelper-perl_13.11.7ubuntu1 libdeflate0_1.18-1 libdevel-callchecker-perl_0.008-2 libdevel-globaldestruction-perl_0.14-4 libdevel-overloadinfo-perl_0.007-1 libdevel-stacktrace-perl_2.0400-2 libdevmapper1.02.1_2:1.02.185-2ubuntu1 libdist-checkconflicts-perl_0.11-2 libdpkg-perl_1.22.0ubuntu1 libdw1_0.189-4 libdynaloader-functions-perl_0.003-3 libelf1_0.189-4 libencode-locale-perl_1.05-3 libeval-closure-perl_0.14-3 libexpat1_2.5.0-2 libext2fs2_1.47.0-2ubuntu1 libfakeroot_1.32.1-1 libfdisk1_2.39.1-4ubuntu2 libffi8_3.4.4-1 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libfontconfig1_2.14.2-4ubuntu1 libfreetype6_2.13.2+dfsg-1 libfribidi0_1.0.13-3 libgcc-13-dev_13.2.0-6ubuntu1 libgcc-s1_13.2.0-6ubuntu1 libgcrypt20_1.10.2-3ubuntu1 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgdk-pixbuf-2.0-0_2.42.10+dfsg-1build1 libgdk-pixbuf2.0-common_2.42.10+dfsg-1build1 libgfortran-13-dev_13.2.0-6ubuntu1 libgfortran5_13.2.0-6ubuntu1 libglib2.0-0_2.78.1-1 libgmp10_2:6.3.0+dfsg-2ubuntu4 libgnutls30_3.8.1-4ubuntu1 libgomp1_13.2.0-6ubuntu1 libgpg-error-l10n_1.47-2 libgpg-error0_1.47-2 libgpm2_1.20.7-10build1 libgraphite2-3_1.3.14-1build2 libgssapi-krb5-2_1.20.1-3ubuntu1 libharfbuzz0b_8.0.1-1 libhogweed6_3.9.1-2 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zlib1g_1:1.2.13.dfsg-1ubuntu5 zlib1g-dev_1:1.2.13.dfsg-1ubuntu5 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: r-bioc-fmcsr Binary: r-bioc-fmcsr Architecture: any Version: 1.42.0+dfsg1-1 Maintainer: Debian R Packages Maintainers Uploaders: Andreas Tille Homepage: https://bioconductor.org/packages/fmcsR/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-fmcsr Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-fmcsr.git Testsuite: autopkgtest-pkg-r Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-chemminer, r-cran-runit, r-bioc-biocgenerics Package-List: r-bioc-fmcsr deb gnu-r optional arch=any Checksums-Sha1: ecf8644f0e078eb801634c96f941f00e0c496eca 37180 r-bioc-fmcsr_1.42.0+dfsg1.orig.tar.xz 41b53975048a34b585883bae7a440719c7f8d809 5792 r-bioc-fmcsr_1.42.0+dfsg1-1.debian.tar.xz Checksums-Sha256: a0503997c482cefae952c72ad251577d133c797bbf28b7d72a8662fdefcb2c08 37180 r-bioc-fmcsr_1.42.0+dfsg1.orig.tar.xz 039c0f8f1b4653c351bb2bc54048bb1d445529e79273416f05117da865edcc70 5792 r-bioc-fmcsr_1.42.0+dfsg1-1.debian.tar.xz Files: 7eb0eae425b4146da7536742a245c0eb 37180 r-bioc-fmcsr_1.42.0+dfsg1.orig.tar.xz df7159f698b3d140f5326d36f567a177 5792 r-bioc-fmcsr_1.42.0+dfsg1-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmUxPCgRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFqRw/9HE6CjgxH0DNc20w+OP6y+3PYKrRP5uom tpd30oti13UB4Y6kcleawyF699u8Y/JxOlJW2mkj8bmxr+DHCZJqAVuivFBfWcMm eQjfPEDCzgIIKjbOLGShP2t9znosxCpOCITIqWZN8Jzg7ve0H6XKPbKbUzN4D5Oi 6vEkJa3v0RtYbNi5IhuNEL3L7zao7Dqt1Qvt2G+zL55C18/2v0I3NfvwPeGM4NuD 3b+O0/Gve5mMo+ihHchc4emBZvG9n+v23bDZb2wS5K38QQqaU/2Fq2wUo38eUQzx ZSS2zdykF0Z8jDuANqWU0SONUtVNxRQx/ki+PHVu3Q8QchFu/oXPYeEk5SIdFVAn 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APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-26922043 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-26922043 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-26922043 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package r-bioc-fmcsr dpkg-buildpackage: info: source version 1.42.0+dfsg1-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary-arch dh binary-arch --buildsystem R dh_update_autotools_config -a -O--buildsystem=R dh_autoreconf -a -O--buildsystem=R configure.ac:32: warning: AC_OUTPUT should be used without arguments. configure.ac:32: You should run autoupdate. dh_auto_configure -a -O--buildsystem=R dh_auto_build -a -O--buildsystem=R dh_auto_test -a -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=R dh_prep -a -O--buildsystem=R dh_auto_install --destdir=debian/r-bioc-fmcsr/ -a -O--buildsystem=R I: R Package: fmcsR Version: 1.42.0 I: Building using R version 4.3.1-4 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Thu, 19 Oct 2023 16:19:26 +0200 mkdir -p /<>/r-bioc-fmcsr-1.42.0\+dfsg1/debian/r-bioc-fmcsr/usr/lib/R/site-library R CMD INSTALL -l /<>/r-bioc-fmcsr-1.42.0\+dfsg1/debian/r-bioc-fmcsr/usr/lib/R/site-library --clean . "--built-timestamp='Thu, 19 Oct 2023 16:19:26 +0200'" * installing *source* package ‘fmcsR’ ... ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ -std=gnu++17 accepts -g... yes checking for g++ -std=gnu++17 option to enable C++11 features... none needed checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for inline... inline checking for size_t... yes checking for alarm... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating config.h ** libs using C++ compiler: ‘g++ (Ubuntu 13.2.0-6ubuntu1) 13.2.0’ make[1]: Entering directory '/<>/src' g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=/usr/src/r-base-4.3.1-4 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c MCS.cpp -o MCS.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=/usr/src/r-base-4.3.1-4 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c MCSCompound.cpp -o MCSCompound.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=/usr/src/r-base-4.3.1-4 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c MCSMap.cpp -o MCSMap.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=/usr/src/r-base-4.3.1-4 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c MCSRingDetector.cpp -o MCSRingDetector.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=/usr/src/r-base-4.3.1-4 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c fmcs_R_wrap.cpp -o fmcs_R_wrap.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-E5Ax2d/r-base-4.3.1=/usr/src/r-base-4.3.1-4 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c util.cpp -o util.o g++ -std=gnu++17 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o fmcsR.so MCS.o MCSCompound.o MCSMap.o MCSRingDetector.o fmcs_R_wrap.o util.o -L/usr/lib/R/lib -lR make[1]: Leaving directory '/<>/src' make[1]: Entering directory '/<>/src' make[1]: Leaving directory '/<>/src' installing to /<>/debian/r-bioc-fmcsr/usr/lib/R/site-library/00LOCK-r-bioc-fmcsr-1.42.0+dfsg1/00new/fmcsR/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fmcsR) Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 299. Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 301. Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 302. Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 305. W: Ignoring specified R dependency: R (>= 2.10.0) I: Using r-bioc-chemminer for Depends:ChemmineR I: Using r-bioc-biocstyle for Suggests:BiocStyle I: Using r-cran-knitr for Suggests:knitr W: Cannot find a debian package for Suggests:knitcitations W: Cannot find a debian package for Suggests:knitrBootstrap I: Using r-cran-rmarkdown for Suggests:rmarkdown I: Using r-cran-runit for Imports:RUnit I: Using r-bioc-chemminer for Imports:ChemmineR I: Using r-bioc-biocgenerics for Imports:BiocGenerics I: BioConductor API version: r-api-bioc-3.17 I: Use r-bioc-fmcsr as Debian binary package for variables substitution dh_installdocs -a -O--buildsystem=R dh_installchangelogs -a -O--buildsystem=R dh_installsystemduser -a -O--buildsystem=R dh_perl -a -O--buildsystem=R dh_link -a -O--buildsystem=R dh_strip_nondeterminism -a -O--buildsystem=R dh_compress -a -O--buildsystem=R dh_fixperms -a -O--buildsystem=R dh_missing -a -O--buildsystem=R dh_dwz -a -O--buildsystem=R dh_strip -a -O--buildsystem=R c5177bc08273cd976ed70678743f6bfc0ede330c dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -a -O--buildsystem=R dh_gencontrol -a -O--buildsystem=R dh_md5sums -a -O--buildsystem=R dh_builddeb -a -O--buildsystem=R INFO: pkgstriptranslations version 154 INFO: pkgstriptranslations version 154 pkgstriptranslations: processing r-bioc-fmcsr (in debian/r-bioc-fmcsr); do_strip: , oemstrip: pkgstriptranslations: processing r-bioc-fmcsr-dbgsym (in debian/.debhelper/r-bioc-fmcsr/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/r-bioc-fmcsr/DEBIAN/control, package r-bioc-fmcsr, directory debian/r-bioc-fmcsr pkgstripfiles: processing control file: debian/.debhelper/r-bioc-fmcsr/dbgsym-root/DEBIAN/control, package r-bioc-fmcsr-dbgsym, directory debian/.debhelper/r-bioc-fmcsr/dbgsym-root dpkg-deb: building package 'r-bioc-fmcsr-dbgsym' in 'debian/.debhelper/scratch-space/build-r-bioc-fmcsr/r-bioc-fmcsr-dbgsym_1.42.0+dfsg1-1_armhf.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package r-bioc-fmcsr ... pkgstripfiles: No PNG files. dpkg-deb: building package 'r-bioc-fmcsr' in '../r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.deb'. Renaming r-bioc-fmcsr-dbgsym_1.42.0+dfsg1-1_armhf.deb to r-bioc-fmcsr-dbgsym_1.42.0+dfsg1-1_armhf.ddeb dpkg-genbuildinfo --build=any -O../r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.buildinfo dpkg-genchanges --build=any -mLaunchpad Build Daemon -O../r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-10-27T00:44:01Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.changes: ------------------------------------------ Format: 1.8 Date: Thu, 19 Oct 2023 16:19:26 +0200 Source: r-bioc-fmcsr Binary: r-bioc-fmcsr Built-For-Profiles: noudeb Architecture: armhf Version: 1.42.0+dfsg1-1 Distribution: noble-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: r-bioc-fmcsr - GNU R mismatch tolerant maximum common substructure searching Closes: 1049116 Changes: r-bioc-fmcsr (1.42.0+dfsg1-1) unstable; urgency=medium . * Clean up some auto generated files Closes: #1049116 * Since we are removing some docs anyway we also drop auto generated files which make building package twice in a row harder than needed Checksums-Sha1: 1163a45463e851dc28249822d2700186c12306b0 148078 r-bioc-fmcsr-dbgsym_1.42.0+dfsg1-1_armhf.ddeb c1d616aaf7e036acc7adc4d61e7ab83cf6ebb8c1 14171 r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.buildinfo 2017fc5e47c74532309c3145a1c4f028a7fe37c4 229964 r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.deb Checksums-Sha256: 65b5d5c303f553d6566d80eaa5d4d2e8af84d8d9194d1992e9c614f7f6b9e1ef 148078 r-bioc-fmcsr-dbgsym_1.42.0+dfsg1-1_armhf.ddeb 086ebebf47bc37c09decf4f6b45b3072177c3d486830e4cc2a0c89c77de16c8b 14171 r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.buildinfo 464c3f58cfbf2675b6759340e0222334c6189953fcef34732c03e6dd03e19600 229964 r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.deb Files: 83dff0f07d00b8337519978ef2caeeaa 148078 debug optional r-bioc-fmcsr-dbgsym_1.42.0+dfsg1-1_armhf.ddeb 5db376d2335873a166afd66e0c772395 14171 gnu-r optional r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.buildinfo 10e8e4b866b73e4af95e99221db55911 229964 gnu-r optional r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.deb /<>/r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.changes.new could not be renamed to /<>/r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: r-bioc-fmcsr Binary: r-bioc-fmcsr r-bioc-fmcsr-dbgsym Architecture: armhf Version: 1.42.0+dfsg1-1 Checksums-Md5: 83dff0f07d00b8337519978ef2caeeaa 148078 r-bioc-fmcsr-dbgsym_1.42.0+dfsg1-1_armhf.ddeb 10e8e4b866b73e4af95e99221db55911 229964 r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.deb Checksums-Sha1: 1163a45463e851dc28249822d2700186c12306b0 148078 r-bioc-fmcsr-dbgsym_1.42.0+dfsg1-1_armhf.ddeb 2017fc5e47c74532309c3145a1c4f028a7fe37c4 229964 r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.deb Checksums-Sha256: 65b5d5c303f553d6566d80eaa5d4d2e8af84d8d9194d1992e9c614f7f6b9e1ef 148078 r-bioc-fmcsr-dbgsym_1.42.0+dfsg1-1_armhf.ddeb 464c3f58cfbf2675b6759340e0222334c6189953fcef34732c03e6dd03e19600 229964 r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.deb Build-Origin: Ubuntu Build-Architecture: armhf Build-Date: Fri, 27 Oct 2023 00:44:01 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-13), autotools-dev (= 20220109.1), base-files (= 13ubuntu3), base-passwd (= 3.6.2), bash (= 5.2.15-2ubuntu1), binutils (= 2.41-5ubuntu1), binutils-arm-linux-gnueabihf (= 2.41-5ubuntu1), binutils-common (= 2.41-5ubuntu1), bsdextrautils (= 2.39.1-4ubuntu2), bsdutils (= 1:2.39.1-4ubuntu2), build-essential (= 12.10ubuntu1), bzip2 (= 1.0.8-5build1), ca-certificates (= 20230311ubuntu1), coreutils (= 9.1-1ubuntu2), cpp (= 4:13.2.0-1ubuntu1), cpp-13 (= 13.2.0-6ubuntu1), dash (= 0.5.12-6ubuntu1), dctrl-tools (= 2.24-3build2), debconf (= 1.5.82), debhelper (= 13.11.7ubuntu1), debianutils (= 5.14), debugedit (= 1:5.0-5), dh-autoreconf (= 20), dh-r (= 20230707ubuntu1), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), dpkg (= 1.22.0ubuntu1), dpkg-dev (= 1.22.0ubuntu1), dwz (= 0.15-1), file (= 1:5.45-2), findutils (= 4.9.0-5), fontconfig (= 2.14.2-4ubuntu1), fontconfig-config (= 2.14.2-4ubuntu1), fonts-font-awesome (= 5.0.10+really4.7.0~dfsg-4.1), fonts-glyphicons-halflings (= 1.009~3.4.1+dfsg-3), fonts-mathjax (= 2.7.9+dfsg-1), fonts-noto-core (= 20201225-2), fonts-noto-mono (= 20201225-2), g++ (= 4:13.2.0-1ubuntu1), g++-13 (= 13.2.0-6ubuntu1), gcc (= 4:13.2.0-1ubuntu1), gcc-13 (= 13.2.0-6ubuntu1), gcc-13-base (= 13.2.0-6ubuntu1), gettext (= 0.21-13), gettext-base (= 0.21-13), gfortran (= 4:13.2.0-1ubuntu1), gfortran-13 (= 13.2.0-6ubuntu1), grep (= 3.11-3), groff-base (= 1.23.0-3), gzip (= 1.12-1ubuntu1), hostname (= 3.23+nmu1ubuntu1), icu-devtools (= 72.1-3ubuntu3), init-system-helpers (= 1.65.2ubuntu1), intltool-debian (= 0.35.0+20060710.6), javascript-common (= 11+nmu1), libacl1 (= 2.3.1-3), libalgorithm-c3-perl (= 0.11-2), libarchive-zip-perl (= 1.68-1), libasan8 (= 13.2.0-6ubuntu1), libatomic1 (= 13.2.0-6ubuntu1), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.1.1-1), libaudit1 (= 1:3.1.1-1), libb-hooks-endofscope-perl (= 0.26-1), libb-hooks-op-check-perl (= 0.22-2build1), libbinutils (= 2.41-5ubuntu1), libblas-dev (= 3.11.0-2build1), libblas3 (= 3.11.0-2build1), libblkid1 (= 2.39.1-4ubuntu2), libboost1.81-dev (= 1.81.0-7), libbrotli1 (= 1.0.9-2build8), libbsd0 (= 0.11.7-4), libbz2-1.0 (= 1.0.8-5build1), libbz2-dev (= 1.0.8-5build1), libc-bin (= 2.38-3ubuntu1), libc-dev-bin (= 2.38-3ubuntu1), libc6 (= 2.38-3ubuntu1), libc6-dev (= 2.38-3ubuntu1), libcairo-gobject2 (= 1.18.0-1), libcairo2 (= 1.18.0-1), libcap-ng0 (= 0.8.3-1build2), libcap2 (= 1:2.66-4ubuntu1), libcc1-0 (= 13.2.0-6ubuntu1), libclass-c3-perl (= 0.35-2), libclass-load-perl (= 0.25-2), libclass-load-xs-perl (= 0.10-2build1), libclone-perl (= 0.46-1), libcom-err2 (= 1.47.0-2ubuntu1), libcrypt-dev (= 1:4.4.36-2), libcrypt1 (= 1:4.4.36-2), libctf-nobfd0 (= 2.41-5ubuntu1), libctf0 (= 2.41-5ubuntu1), libcurl3-gnutls (= 8.2.1-1ubuntu3.1), libcurl4 (= 8.2.1-1ubuntu3.1), libdata-optlist-perl (= 0.114-1), libdatrie1 (= 0.2.13-2), libdb5.3 (= 5.3.28+dfsg2-2), libdebconfclient0 (= 0.270ubuntu1), libdebhelper-perl (= 13.11.7ubuntu1), libdeflate0 (= 1.18-1), libdevel-callchecker-perl (= 0.008-2), libdevel-globaldestruction-perl (= 0.14-4), libdevel-overloadinfo-perl (= 0.007-1), libdevel-stacktrace-perl (= 2.0400-2), libdist-checkconflicts-perl (= 0.11-2), libdpkg-perl (= 1.22.0ubuntu1), libdw1 (= 0.189-4), libdynaloader-functions-perl (= 0.003-3), libelf1 (= 0.189-4), libencode-locale-perl (= 1.05-3), libeval-closure-perl (= 0.14-3), libexpat1 (= 2.5.0-2), libffi8 (= 3.4.4-1), libfile-stripnondeterminism-perl (= 1.13.1-1), libfile-which-perl (= 1.27-2), libfontconfig1 (= 2.14.2-4ubuntu1), libfreetype6 (= 2.13.2+dfsg-1), libfribidi0 (= 1.0.13-3), libgcc-13-dev (= 13.2.0-6ubuntu1), libgcc-s1 (= 13.2.0-6ubuntu1), libgcrypt20 (= 1.10.2-3ubuntu1), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgdk-pixbuf-2.0-0 (= 2.42.10+dfsg-1build1), libgdk-pixbuf2.0-common (= 2.42.10+dfsg-1build1), libgfortran-13-dev (= 13.2.0-6ubuntu1), libgfortran5 (= 13.2.0-6ubuntu1), libglib2.0-0 (= 2.78.1-1), libgmp10 (= 2:6.3.0+dfsg-2ubuntu4), libgnutls30 (= 3.8.1-4ubuntu1), libgomp1 (= 13.2.0-6ubuntu1), libgpg-error0 (= 1.47-2), libgraphite2-3 (= 1.3.14-1build2), libgssapi-krb5-2 (= 1.20.1-3ubuntu1), libharfbuzz0b (= 8.0.1-1), libhogweed6 (= 3.9.1-2), libhttp-date-perl (= 6.05-2), libhttp-message-perl (= 6.44-2ubuntu1), libice6 (= 2:1.0.10-1build2), libicu-dev (= 72.1-3ubuntu3), libicu72 (= 72.1-3ubuntu3), libidn2-0 (= 2.3.4-1), libio-html-perl (= 1.004-3), libisl23 (= 0.26-3), libjansson4 (= 2.14-2), libjbig0 (= 2.1-6.1ubuntu1), libjpeg-dev (= 8c-2ubuntu11), libjpeg-turbo8 (= 2.1.5-2ubuntu1), libjpeg-turbo8-dev (= 2.1.5-2ubuntu1), libjpeg8 (= 8c-2ubuntu11), libjpeg8-dev (= 8c-2ubuntu11), libjs-bootstrap (= 3.4.1+dfsg-3), libjs-bootstrap4 (= 4.6.1+dfsg1-4), libjs-d3 (= 3.5.17-4), libjs-es5-shim (= 4.6.7-2), libjs-highlight.js (= 9.18.5+dfsg1-2), libjs-jquery (= 3.6.1+dfsg+~3.5.14-1), libjs-jquery-datatables (= 1.11.5+dfsg-2), libjs-jquery-datatables-extensions (= 0.0+git20150910.28fd64e+dfsg-5), libjs-jquery-selectize.js (= 0.12.6+dfsg-1.1), libjs-jquery-ui (= 1.13.2+dfsg-1), libjs-json (= 0~20221030+~1.0.8-1), libjs-mathjax (= 2.7.9+dfsg-1), libjs-microplugin.js (= 0.0.3+dfsg-1.1), libjs-modernizr (= 2.6.2+ds1-5), libjs-popper.js (= 1.16.1+ds-6), libjs-prettify (= 2015.12.04+dfsg-1.1), libjs-sifter.js (= 0.6.0+dfsg-3), libjs-twitter-bootstrap-datepicker (= 1.3.1+dfsg1-4.1), libk5crypto3 (= 1.20.1-3ubuntu1), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-3ubuntu1), libkrb5support0 (= 1.20.1-3ubuntu1), liblapack-dev (= 3.11.0-2build1), liblapack3 (= 3.11.0-2build1), libldap2 (= 2.6.6+dfsg-1~exp1ubuntu1), liblerc4 (= 4.0.0+ds-2ubuntu2), liblua5.3-0 (= 5.3.6-2), liblwp-mediatypes-perl (= 6.04-2), liblz4-1 (= 1.9.4-1), liblzma-dev (= 5.4.4-0.1), liblzma5 (= 5.4.4-0.1), libmagic-mgc (= 1:5.45-2), libmagic1 (= 1:5.45-2), libmd0 (= 1.1.0-1), libmodule-implementation-perl (= 0.09-2), libmodule-runtime-conflicts-perl (= 0.003-2), libmodule-runtime-perl (= 0.016-2), libmoose-perl (= 2.2206-1), libmount1 (= 2.39.1-4ubuntu2), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.1-1), libmro-compat-perl (= 0.15-2), libnamespace-clean-perl (= 0.27-2), libncurses-dev (= 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(= 1.6.40-2), libpsl5 (= 0.21.2-1), libreadline-dev (= 8.2-1.3), libreadline8 (= 8.2-1.3), librsvg2-2 (= 2.54.7+dfsg-2), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build4), libsasl2-2 (= 2.1.28+dfsg1-3), libsasl2-modules-db (= 2.1.28+dfsg1-3), libseccomp2 (= 2.5.4-1ubuntu3), libselinux1 (= 3.5-1), libsframe1 (= 2.41-5ubuntu1), libsharpyuv0 (= 1.3.2-0.3), libsm6 (= 2:1.2.3-1build2), libsmartcols1 (= 2.39.1-4ubuntu2), libssh-4 (= 0.10.5-3ubuntu1), libssl3 (= 3.0.10-1ubuntu2.1), libstdc++-13-dev (= 13.2.0-6ubuntu1), libstdc++6 (= 13.2.0-6ubuntu1), libsub-exporter-perl (= 0.990-1), libsub-exporter-progressive-perl (= 0.001013-3), libsub-identify-perl (= 0.14-3), libsub-install-perl (= 0.929-1), libsub-name-perl (= 0.27-1), libsub-override-perl (= 0.09-4), libswitch-perl (= 2.17-3), libsystemd0 (= 253.5-1ubuntu7), libtasn1-6 (= 4.19.0-3), libtcl8.6 (= 8.6.13+dfsg-2), libthai-data (= 0.1.29-1build1), libthai0 (= 0.1.29-1build1), libtiff6 (= 4.5.1+git230720-1ubuntu1), libtimedate-perl (= 2.3300-2), libtinfo6 (= 6.4+20231016-1), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtk8.6 (= 8.6.13-2), libtool (= 2.4.7-7), libtry-tiny-perl (= 0.31-2), libubsan1 (= 13.2.0-6ubuntu1), libuchardet0 (= 0.0.7-1build2), libudev1 (= 253.5-1ubuntu7), libunistring2 (= 1.0-2), liburi-perl (= 5.21-1), libuuid1 (= 2.39.1-4ubuntu2), libuv1 (= 1.46.0-2), libvariable-magic-perl (= 0.63-1), libwebp7 (= 1.3.2-0.3), libwww-curl-perl (= 4.17-10), libwww-curl-simple-perl (= 0.100191-3), libx11-6 (= 2:1.8.6-1ubuntu1), libx11-data (= 2:1.8.6-1ubuntu1), libxau6 (= 1:1.0.9-1build5), libxcb-render0 (= 1.15-1), libxcb-shm0 (= 1.15-1), libxcb1 (= 1.15-1), libxdmcp6 (= 1:1.1.3-0ubuntu5), libxext6 (= 2:1.3.4-1build1), libxft2 (= 2.3.6-1), libxml2 (= 2.9.14+dfsg-1.3), libxmuu1 (= 2:1.1.3-3), libxrender1 (= 1:0.9.10-1.1), libxss1 (= 1:1.2.3-1build2), libxt6 (= 1:1.2.1-1.1), libyaml-0-2 (= 0.2.5-1), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.5.0-9.9), login (= 1:4.13+dfsg1-1ubuntu1), lto-disabled-list (= 43), m4 (= 1.4.19-4), make (= 4.3-4.1build1), man-db (= 2.12.0-1), mawk (= 1.3.4.20230808-1), ncurses-base (= 6.4+20231016-1), ncurses-bin (= 6.4+20231016-1), node-bootstrap-sass (= 3.4.3-2), node-html5shiv (= 3.7.3+dfsg-5), node-normalize.css (= 8.0.1-5), openssl (= 3.0.10-1ubuntu2.1), pandoc (= 2.17.1.1-3ubuntu1), pandoc-data (= 2.17.1.1-3ubuntu1), patch (= 2.7.6-7build2), perl (= 5.36.0-9ubuntu1), perl-base (= 5.36.0-9ubuntu1), perl-modules-5.36 (= 5.36.0-9ubuntu1), pkg-config (= 1.8.1-2), pkgconf (= 1.8.1-2), pkgconf-bin (= 1.8.1-2), po-debconf (= 1.0.21+nmu1), r-base-core (= 4.3.1-4), r-base-dev (= 4.3.1-4), r-bioc-biocgenerics (= 0.46.0-1), r-bioc-chemminer (= 3.52.0+dfsg-1), r-cran-base64enc (= 0.1-3-3), r-cran-bh (= 1.81.0-1), r-cran-bitops (= 1.0-7-1), r-cran-bslib (= 0.5.1+dfsg-1), r-cran-cachem (= 1.0.8-1), r-cran-cli (= 3.6.1-1), r-cran-colorspace (= 2.1-0+dfsg-1), r-cran-commonmark (= 1.9.0-1), r-cran-crayon (= 1.5.2-1), r-cran-crosstalk (= 1.2.0+dfsg-1), r-cran-dbi (= 1.1.3-1), r-cran-digest (= 0.6.33-1), r-cran-dt (= 0.30+dfsg-2), r-cran-ellipsis (= 0.3.2-2), r-cran-evaluate (= 0.22-1), r-cran-fansi (= 1.0.4-1), r-cran-farver (= 2.1.1-1), r-cran-fastmap (= 1.1.1-1), r-cran-fontawesome (= 0.5.2-1), r-cran-fs (= 1.6.3+dfsg-1), r-cran-ggplot2 (= 3.4.4+dfsg-1), r-cran-glue (= 1.6.2-1), r-cran-gridextra (= 2.3-3build1), r-cran-gtable (= 0.3.4+dfsg-1), r-cran-highr (= 0.10+dfsg-1), r-cran-htmltools (= 0.5.5-1), r-cran-htmlwidgets (= 1.6.2+dfsg-1), r-cran-httpuv (= 1.6.11+dfsg-1), r-cran-isoband (= 0.2.7-1), r-cran-jquerylib (= 0.1.4+dfsg-4), r-cran-jsonlite (= 1.8.5+dfsg-1), r-cran-knitr (= 1.44+dfsg-1), r-cran-labeling (= 0.4.3-1), r-cran-later (= 1.3.1+dfsg-1), r-cran-lattice (= 0.22-5-1), r-cran-lazyeval (= 0.2.2-1build1), r-cran-lifecycle (= 1.0.3+dfsg-1), r-cran-littler (= 0.3.18-2), r-cran-magrittr (= 2.0.3-1), r-cran-mass (= 7.3-60-2), r-cran-matrix (= 1.6-1-1), r-cran-memoise (= 2.0.1-1), r-cran-mgcv (= 1.9-0-1), r-cran-mime (= 0.12-1), r-cran-munsell (= 0.5.0-2build1), r-cran-nlme (= 3.1.163-1), r-cran-pillar (= 1.9.0+dfsg-1), r-cran-pkgconfig (= 2.0.3-2build1), r-cran-pkgkitten (= 0.2.3-1), r-cran-png (= 0.1-8-1), r-cran-promises (= 1.2.0.1+dfsg-1), r-cran-r6 (= 2.5.1-1), r-cran-rappdirs (= 0.3.3-1), r-cran-rcolorbrewer (= 1.1-3-1build1), r-cran-rcpp (= 1.0.11-1), r-cran-rcurl (= 1.98-1.12+dfsg-1), r-cran-rjson (= 0.2.21-1), r-cran-rlang (= 1.1.1-1), r-cran-rmarkdown (= 2.25+dfsg-1), r-cran-rsvg (= 2.4.0-1), r-cran-runit (= 0.4.32-3), r-cran-sass (= 0.4.7+dfsg-1), r-cran-scales (= 1.2.1-1), r-cran-shiny (= 1.7.5.1+dfsg-1), r-cran-sourcetools (= 0.1.7-1-1), r-cran-stringi (= 1.7.12-1build1), r-cran-stringr (= 1.5.0-1), r-cran-tibble (= 3.2.1+dfsg-2), r-cran-tinytex (= 0.48-1), r-cran-utf8 (= 1.2.3-1), r-cran-vctrs (= 0.6.3-1), r-cran-viridislite (= 0.4.2-2), r-cran-withr (= 2.5.0-1), r-cran-xfun (= 0.39+dfsg-1), r-cran-xtable (= 1:1.8-4-2), r-cran-yaml (= 2.3.7-1), readline-common (= 8.2-1.3), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.9-1), sensible-utils (= 0.0.20), shared-mime-info (= 2.2-1), sysvinit-utils (= 3.07-1ubuntu1), tar (= 1.34+dfsg-1.2ubuntu1), tzdata (= 2023c-9ubuntu1), ucf (= 3.0043+nmu1), unzip (= 6.0-28ubuntu1), util-linux (= 2.39.1-4ubuntu2), x11-common (= 1:7.7+23ubuntu2), xauth (= 1:1.1.2-1), xdg-utils (= 1.1.3-4.1ubuntu3), xz-utils (= 5.4.4-0.1), zip (= 3.0-13), zlib1g (= 1:1.2.13.dfsg-1ubuntu5), zlib1g-dev (= 1:1.2.13.dfsg-1ubuntu5) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1697725166" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ r-bioc-fmcsr_1.42.0+dfsg1-1_armhf.deb ------------------------------------- new Debian package, version 2.0. size 229964 bytes: control archive=1796 bytes. 1244 bytes, 23 lines control 2382 bytes, 31 lines md5sums Package: r-bioc-fmcsr Version: 1.42.0+dfsg1-1 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian R Packages Maintainers Installed-Size: 360 Depends: r-api-4.0, r-api-bioc-3.17, r-bioc-chemminer, r-cran-runit, r-bioc-biocgenerics, libc6 (>= 2.38), libgcc-s1 (>= 3.5), libstdc++6 (>= 13.1) Suggests: r-bioc-biocstyle, r-cran-knitr, r-cran-rmarkdown Section: gnu-r Priority: optional Homepage: https://bioconductor.org/packages/fmcsR/ Description: GNU R mismatch tolerant maximum common substructure searching The fmcsR package introduces an efficient maximum common substructure (MCS) algorithms combined with a novel matching strategy that allows for atom and/or bond mismatches in the substructures shared among two small molecules. The resulting flexible MCSs (FMCSs) are often larger than strict MCSs, resulting in the identification of more common features in their source structures, as well as a higher sensitivity in finding compounds with weak structural similarities. The fmcsR package provides several utilities to use the FMCS algorithm for pairwise compound comparisons, structure similarity searching and clustering. drwxr-xr-x root/root 0 2023-10-19 14:19 ./ drwxr-xr-x root/root 0 2023-10-19 14:19 ./usr/ drwxr-xr-x root/root 0 2023-10-19 14:19 ./usr/lib/ drwxr-xr-x root/root 0 2023-10-19 14:19 ./usr/lib/R/ drwxr-xr-x root/root 0 2023-10-19 14:19 ./usr/lib/R/site-library/ drwxr-xr-x root/root 0 2023-10-19 14:19 ./usr/lib/R/site-library/fmcsR/ -rw-r--r-- root/root 86 2023-10-19 14:19 ./usr/lib/R/site-library/fmcsR/CITATION -rw-r--r-- root/root 1763 2023-10-19 14:19 ./usr/lib/R/site-library/fmcsR/DESCRIPTION -rw-r--r-- root/root 324 2023-10-19 14:19 ./usr/lib/R/site-library/fmcsR/INDEX drwxr-xr-x root/root 0 2023-10-19 14:19 ./usr/lib/R/site-library/fmcsR/Meta/ -rw-r--r-- root/root 540 2023-10-19 14:19 ./usr/lib/R/site-library/fmcsR/Meta/Rd.rds -rw-r--r-- root/root 121 2023-10-19 14:19 ./usr/lib/R/site-library/fmcsR/Meta/data.rds -rw-r--r-- root/root 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./usr/share/doc/r-bioc-fmcsr/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: 2304 Build-Time: 21 Distribution: noble-proposed Host Architecture: armhf Install-Time: 46 Job: r-bioc-fmcsr_1.42.0+dfsg1-1.dsc Machine Architecture: arm64 Package: r-bioc-fmcsr Package-Time: 68 Source-Version: 1.42.0+dfsg1-1 Space: 2304 Status: successful Version: 1.42.0+dfsg1-1 -------------------------------------------------------------------------------- Finished at 2023-10-27T00:44:01Z Build needed 00:01:08, 2304k disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-26922043 Scanning for processes to kill in build PACKAGEBUILD-26922043