https://launchpad.net/ubuntu/+source/r-bioc-fmcsr/1.44.0+dfsg-1/+build/27033351 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos03-arm64-012 5.4.0-167-generic #184-Ubuntu SMP Tue Oct 31 09:24:51 UTC 2023 aarch64 Buildd toolchain package versions: launchpad-buildd_235~645~ubuntu20.04.1 python3-lpbuildd_235~645~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.11 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1.1. Syncing the system clock with the buildd NTP service... 30 Nov 11:11:55 ntpdate[1884]: adjust time server 10.211.37.1 offset -0.011830 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27033351 --image-type chroot /home/buildd/filecache-default/59612f0fc5bae33f6226b6e60c2e882b82c04bd0 Creating target for build PACKAGEBUILD-27033351 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27033351 Starting target for build PACKAGEBUILD-27033351 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27033351 'deb http://ftpmaster.internal/ubuntu noble main universe' 'deb http://ftpmaster.internal/ubuntu noble-security main universe' 'deb http://ftpmaster.internal/ubuntu noble-updates main universe' 'deb http://ftpmaster.internal/ubuntu noble-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-27033351 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27033351 Updating target for build PACKAGEBUILD-27033351 Get:1 http://ftpmaster.internal/ubuntu noble InRelease [240 kB] Get:2 http://ftpmaster.internal/ubuntu noble-security InRelease [74.9 kB] Get:3 http://ftpmaster.internal/ubuntu noble-updates InRelease [74.9 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease [102 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf Packages [1336 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main Translation-en [517 kB] Get:7 http://ftpmaster.internal/ubuntu noble/universe armhf Packages [14.7 MB] Get:8 http://ftpmaster.internal/ubuntu noble/universe Translation-en [6026 kB] Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main armhf Packages [150 kB] Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main Translation-en [52.7 kB] Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf Packages [1239 kB] Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe Translation-en [383 kB] Fetched 24.9 MB in 8s (2958 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libunistring2 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: libunistring5 The following packages will be upgraded: apt apt-utils base-files base-passwd bash bash-completion binutils binutils-arm-linux-gnueabihf binutils-common bsdextrautils bsdutils cpp cpp-13 debianutils diffutils dpkg dpkg-dev fakeroot g++ g++-13 gcc gcc-13 gcc-13-base grep krb5-locales libapparmor1 libapt-pkg6.0 libargon2-1 libasan8 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcc1-0 libcryptsetup12 libctf-nobfd0 libctf0 libdb5.3 libdpkg-perl libfakeroot libfdisk1 libffi8 libgcc-13-dev libgcc-s1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error-l10n libgpg-error0 libgssapi-krb5-2 libidn2-0 libk5crypto3 libkrb5-3 libkrb5support0 liblzma5 libmount1 libncursesw6 libnsl-dev libnsl2 libpam-modules libpam-modules-bin libpam-runtime libpam0g libperl5.36 libpng16-16 libproc2-0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsframe1 libsmartcols1 libsqlite3-0 libssl3 libstdc++-13-dev libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libubsan1 libudev1 libuuid1 libxxhash0 libzstd1 linux-libc-dev lto-disabled-list mawk mount ncurses-base ncurses-bin openssl optipng perl perl-base perl-modules-5.36 pinentry-curses procps readline-common systemd systemd-dev systemd-sysv sysvinit-utils ubuntu-keyring util-linux uuid-runtime xz-utils zlib1g 119 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 86.0 MB of archives. After this operation, 1912 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu noble/main armhf libnsl-dev armhf 1.3.0-3 [65.8 kB] Get:2 http://ftpmaster.internal/ubuntu noble/main armhf libc6-dev armhf 2.38-3ubuntu1 [1347 kB] Get:3 http://ftpmaster.internal/ubuntu noble/main armhf libc-dev-bin armhf 2.38-3ubuntu1 [18.9 kB] Get:4 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc-common all 1.3.4+ds-1 [7920 B] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc-dev armhf 1.3.4+ds-1 [184 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main armhf libgssapi-krb5-2 armhf 1.20.1-5build1 [118 kB] Get:7 http://ftpmaster.internal/ubuntu noble/main armhf libkrb5-3 armhf 1.20.1-5build1 [320 kB] Get:8 http://ftpmaster.internal/ubuntu noble/main armhf libk5crypto3 armhf 1.20.1-5build1 [78.6 kB] Get:9 http://ftpmaster.internal/ubuntu noble/main armhf libkrb5support0 armhf 1.20.1-5build1 [31.3 kB] Get:10 http://ftpmaster.internal/ubuntu noble/main armhf libssl3 armhf 3.0.10-1ubuntu3 [1560 kB] Get:11 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc3 armhf 1.3.4+ds-1 [72.0 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main armhf libnsl2 armhf 1.3.0-3 [35.9 kB] Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main armhf linux-libc-dev armhf 6.6.0-13.13 [1527 kB] Get:14 http://ftpmaster.internal/ubuntu noble/main armhf libcc1-0 armhf 13.2.0-7ubuntu1 [43.7 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main armhf gcc-13-base armhf 13.2.0-7ubuntu1 [44.6 kB] Get:16 http://ftpmaster.internal/ubuntu noble/main armhf libgcc-s1 armhf 13.2.0-7ubuntu1 [41.1 kB] Get:17 http://ftpmaster.internal/ubuntu noble/main armhf libgomp1 armhf 13.2.0-7ubuntu1 [120 kB] Get:18 http://ftpmaster.internal/ubuntu noble/main armhf libatomic1 armhf 13.2.0-7ubuntu1 [7762 B] Get:19 http://ftpmaster.internal/ubuntu noble/main armhf libasan8 armhf 13.2.0-7ubuntu1 [2749 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main armhf libubsan1 armhf 13.2.0-7ubuntu1 [1072 kB] Get:21 http://ftpmaster.internal/ubuntu noble/main armhf g++-13 armhf 13.2.0-7ubuntu1 [9436 kB] Get:22 http://ftpmaster.internal/ubuntu noble/main armhf libstdc++-13-dev armhf 13.2.0-7ubuntu1 [2449 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main armhf libgcc-13-dev armhf 13.2.0-7ubuntu1 [901 kB] Get:24 http://ftpmaster.internal/ubuntu noble/main armhf gcc-13 armhf 13.2.0-7ubuntu1 [16.5 MB] Get:25 http://ftpmaster.internal/ubuntu noble/main armhf cpp-13 armhf 13.2.0-7ubuntu1 [8245 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main armhf libstdc++6 armhf 13.2.0-7ubuntu1 [697 kB] Get:27 http://ftpmaster.internal/ubuntu noble/main armhf libzstd1 armhf 1.5.5+dfsg2-2 [265 kB] Get:28 http://ftpmaster.internal/ubuntu noble-proposed/main armhf zlib1g armhf 1:1.3.dfsg-3ubuntu1 [50.6 kB] Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libctf0 armhf 2.41-7ubuntu1 [86.9 kB] Get:30 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libctf-nobfd0 armhf 2.41-7ubuntu1 [87.1 kB] Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsframe1 armhf 2.41-7ubuntu1 [12.8 kB] Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libbinutils armhf 2.41-7ubuntu1 [457 kB] Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main armhf binutils-common armhf 2.41-7ubuntu1 [228 kB] Get:34 http://ftpmaster.internal/ubuntu noble-proposed/main armhf binutils armhf 2.41-7ubuntu1 [3076 B] Get:35 http://ftpmaster.internal/ubuntu noble-proposed/main armhf binutils-arm-linux-gnueabihf armhf 2.41-7ubuntu1 [2934 kB] Get:36 http://ftpmaster.internal/ubuntu noble/main armhf libc6 armhf 2.38-3ubuntu1 [2818 kB] Get:37 http://ftpmaster.internal/ubuntu noble/main armhf base-files armhf 13ubuntu5 [73.3 kB] Get:38 http://ftpmaster.internal/ubuntu noble/main armhf debianutils armhf 5.14 [88.0 kB] Get:39 http://ftpmaster.internal/ubuntu noble-proposed/main armhf bash armhf 5.2.21-2ubuntu1 [673 kB] Get:40 http://ftpmaster.internal/ubuntu noble/main armhf bsdutils armhf 1:2.39.2-6ubuntu1 [99.5 kB] Get:41 http://ftpmaster.internal/ubuntu noble/main armhf diffutils armhf 1:3.10-1 [167 kB] Get:42 http://ftpmaster.internal/ubuntu noble/main armhf liblzma5 armhf 5.4.5-0.1 [111 kB] Get:43 http://ftpmaster.internal/ubuntu noble/main armhf libapparmor1 armhf 4.0.0~alpha2-0ubuntu6 [43.6 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main armhf libaudit-common all 1:3.1.1-1build1 [5510 B] Get:45 http://ftpmaster.internal/ubuntu noble/main armhf libcap-ng0 armhf 0.8.3-1build3 [13.7 kB] Get:46 http://ftpmaster.internal/ubuntu noble/main armhf libaudit1 armhf 1:3.1.1-1build1 [44.0 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main armhf libblkid1 armhf 2.39.2-6ubuntu1 [159 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main armhf libselinux1 armhf 3.5-1build2 [69.6 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main armhf libmount1 armhf 2.39.2-6ubuntu1 [171 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main armhf libpam0g armhf 1.5.2-9.1ubuntu1 [59.9 kB] Get:51 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libseccomp2 armhf 2.5.4-2ubuntu1 [48.9 kB] Get:52 http://ftpmaster.internal/ubuntu noble/main armhf systemd-sysv armhf 253.5-1ubuntu7 [11.5 kB] Get:53 http://ftpmaster.internal/ubuntu noble/main armhf systemd-dev all 253.5-1ubuntu7 [78.5 kB] Get:54 http://ftpmaster.internal/ubuntu noble/main armhf systemd armhf 253.5-1ubuntu7 [3043 kB] Get:55 http://ftpmaster.internal/ubuntu noble/main armhf libsystemd-shared armhf 253.5-1ubuntu7 [1781 kB] Get:56 http://ftpmaster.internal/ubuntu noble/main armhf libargon2-1 armhf 0~20190702+dfsg-4 [22.3 kB] Get:57 http://ftpmaster.internal/ubuntu noble/main armhf libuuid1 armhf 2.39.2-6ubuntu1 [33.4 kB] Get:58 http://ftpmaster.internal/ubuntu noble/main armhf libcryptsetup12 armhf 2:2.6.1-5ubuntu1 [217 kB] Get:59 http://ftpmaster.internal/ubuntu noble/main armhf libfdisk1 armhf 2.39.2-6ubuntu1 [195 kB] Get:60 http://ftpmaster.internal/ubuntu noble/main armhf mount armhf 2.39.2-6ubuntu1 [132 kB] Get:61 http://ftpmaster.internal/ubuntu noble/main armhf libsystemd0 armhf 253.5-1ubuntu7 [379 kB] Get:62 http://ftpmaster.internal/ubuntu noble/main armhf libudev1 armhf 253.5-1ubuntu7 [151 kB] Get:63 http://ftpmaster.internal/ubuntu noble/main armhf libxxhash0 armhf 0.8.2-2 [31.3 kB] Get:64 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libapt-pkg6.0 armhf 2.7.7 [962 kB] Get:65 http://ftpmaster.internal/ubuntu noble/main armhf dpkg armhf 1.22.1ubuntu3 [1341 kB] Get:66 http://ftpmaster.internal/ubuntu noble/main armhf grep armhf 3.11-3 [157 kB] Get:67 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-bin armhf 6.4+20231121-1build1 [176 kB] Get:68 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libperl5.36 armhf 5.36.0-10ubuntu1 [4019 kB] Get:69 http://ftpmaster.internal/ubuntu noble-proposed/main armhf perl armhf 5.36.0-10ubuntu1 [235 kB] Get:70 http://ftpmaster.internal/ubuntu noble-proposed/main armhf perl-base armhf 5.36.0-10ubuntu1 [1617 kB] Get:71 http://ftpmaster.internal/ubuntu noble-proposed/main armhf perl-modules-5.36 all 5.36.0-10ubuntu1 [2984 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main armhf libdb5.3 armhf 5.3.28+dfsg2-4 [652 kB] Get:73 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgdbm6 armhf 1.23-5 [29.8 kB] Get:74 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgdbm-compat4 armhf 1.23-5 [5970 B] Get:75 http://ftpmaster.internal/ubuntu noble/main armhf util-linux armhf 2.39.2-6ubuntu1 [1211 kB] Get:76 http://ftpmaster.internal/ubuntu noble-proposed/main armhf base-passwd armhf 3.6.3 [51.0 kB] Get:77 http://ftpmaster.internal/ubuntu noble/main armhf libc-bin armhf 2.38-3ubuntu1 [532 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-base all 6.4+20231121-1build1 [25.2 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main armhf sysvinit-utils armhf 3.08-3ubuntu1 [33.4 kB] Get:80 http://ftpmaster.internal/ubuntu noble-proposed/main armhf apt armhf 2.7.7 [1364 kB] Get:81 http://ftpmaster.internal/ubuntu noble-proposed/main armhf apt-utils armhf 2.7.7 [212 kB] Get:82 http://ftpmaster.internal/ubuntu noble-proposed/main armhf ubuntu-keyring all 2023.11.28.1 [11.1 kB] Get:83 http://ftpmaster.internal/ubuntu noble/main armhf libunistring5 armhf 1.1-2 [512 kB] Get:84 http://ftpmaster.internal/ubuntu noble/main armhf libidn2-0 armhf 2.3.4-1build1 [94.2 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main armhf libgnutls30 armhf 3.8.1-4ubuntu6 [941 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules-bin armhf 1.5.2-9.1ubuntu1 [43.6 kB] Get:87 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules armhf 1.5.2-9.1ubuntu1 [265 kB] Get:88 http://ftpmaster.internal/ubuntu noble/main armhf libsmartcols1 armhf 2.39.2-6ubuntu1 [116 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main armhf uuid-runtime armhf 2.39.2-6ubuntu1 [40.7 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error-l10n all 1.47-3 [7936 B] Get:91 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error0 armhf 1.47-3 [62.2 kB] Get:92 http://ftpmaster.internal/ubuntu noble/main armhf libpam-runtime all 1.5.2-9.1ubuntu1 [41.5 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main armhf libsemanage-common all 3.5-1build1 [9982 B] Get:94 http://ftpmaster.internal/ubuntu noble/main armhf libsepol2 armhf 3.5-2 [262 kB] Get:95 http://ftpmaster.internal/ubuntu noble/main armhf libsemanage2 armhf 3.5-1build1 [84.1 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main armhf libncursesw6 armhf 6.4+20231121-1build1 [118 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main armhf libtinfo6 armhf 6.4+20231121-1build1 [90.4 kB] Get:98 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libffi8 armhf 3.4.4-2 [20.8 kB] Get:99 http://ftpmaster.internal/ubuntu noble/main armhf libproc2-0 armhf 2:4.0.4-2ubuntu1 [49.6 kB] Get:100 http://ftpmaster.internal/ubuntu noble/main armhf mawk armhf 1.3.4.20231102-1 [115 kB] Get:101 http://ftpmaster.internal/ubuntu noble/main armhf procps armhf 2:4.0.4-2ubuntu1 [699 kB] Get:102 http://ftpmaster.internal/ubuntu noble/main armhf krb5-locales all 1.20.1-5build1 [13.7 kB] Get:103 http://ftpmaster.internal/ubuntu noble-proposed/main armhf readline-common all 8.2-3 [56.2 kB] Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libreadline8 armhf 8.2-3 [129 kB] Get:105 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsqlite3-0 armhf 3.44.2-1 [593 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main armhf openssl armhf 3.0.10-1ubuntu3 [1158 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main armhf bash-completion all 1:2.11-8 [180 kB] Get:108 http://ftpmaster.internal/ubuntu noble/main armhf bsdextrautils armhf 2.39.2-6ubuntu1 [77.7 kB] Get:109 http://ftpmaster.internal/ubuntu noble/main armhf libpng16-16 armhf 1.6.40-2 [166 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main armhf xz-utils armhf 5.4.5-0.1 [266 kB] Get:111 http://ftpmaster.internal/ubuntu noble-proposed/main armhf g++ armhf 4:13.2.0-2ubuntu1 [1108 B] Get:112 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gcc armhf 4:13.2.0-2ubuntu1 [5196 B] Get:113 http://ftpmaster.internal/ubuntu noble-proposed/main armhf cpp armhf 4:13.2.0-2ubuntu1 [29.0 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main armhf dpkg-dev all 1.22.1ubuntu3 [1148 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main armhf libdpkg-perl all 1.22.1ubuntu3 [286 kB] Get:116 http://ftpmaster.internal/ubuntu noble/main armhf lto-disabled-list all 44 [12.4 kB] Get:117 http://ftpmaster.internal/ubuntu noble/main armhf libfakeroot armhf 1.32.2-1 [28.0 kB] Get:118 http://ftpmaster.internal/ubuntu noble/main armhf fakeroot armhf 1.32.2-1 [68.8 kB] Get:119 http://ftpmaster.internal/ubuntu noble/main armhf optipng armhf 0.7.7-3 [82.2 kB] Get:120 http://ftpmaster.internal/ubuntu noble/main armhf pinentry-curses armhf 1.2.1-3ubuntu1 [36.4 kB] Preconfiguring packages ... Fetched 86.0 MB in 4s (22.2 MB/s) (Reading database ... 13362 files and directories currently installed.) Preparing to unpack .../00-libnsl-dev_1.3.0-3_armhf.deb ... Unpacking libnsl-dev:armhf (1.3.0-3) over (1.3.0-2build2) ... Preparing to unpack .../01-libc6-dev_2.38-3ubuntu1_armhf.deb ... Unpacking libc6-dev:armhf (2.38-3ubuntu1) over (2.38-1ubuntu6) ... Preparing to unpack .../02-libc-dev-bin_2.38-3ubuntu1_armhf.deb ... Unpacking libc-dev-bin (2.38-3ubuntu1) over (2.38-1ubuntu6) ... Preparing to unpack .../03-libtirpc-common_1.3.4+ds-1_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1) over (1.3.3+ds-1) ... Preparing to unpack .../04-libtirpc-dev_1.3.4+ds-1_armhf.deb ... Unpacking libtirpc-dev:armhf (1.3.4+ds-1) over (1.3.3+ds-1) ... Preparing to unpack .../05-libgssapi-krb5-2_1.20.1-5build1_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.20.1-5build1) over (1.20.1-3ubuntu1) ... Preparing to unpack .../06-libkrb5-3_1.20.1-5build1_armhf.deb ... 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Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of restart. Setting up cpp (4:13.2.0-2ubuntu1) ... Setting up libasan8:armhf (13.2.0-7ubuntu1) ... Setting up procps (2:4.0.4-2ubuntu1) ... Installing new version of config file /etc/sysctl.conf ... Setting up libcryptsetup12:armhf (2:2.6.1-5ubuntu1) ... Setting up mawk (1.3.4.20231102-1) ... Setting up libkrb5-3:armhf (1.20.1-5build1) ... Setting up libbinutils:armhf (2.41-7ubuntu1) ... Setting up libc-dev-bin (2.38-3ubuntu1) ... Setting up openssl (3.0.10-1ubuntu3) ... Setting up libgpg-error-l10n (1.47-3) ... Setting up readline-common (8.2-3) ... Setting up libcc1-0:armhf (13.2.0-7ubuntu1) ... Setting up libgdbm6:armhf (1.23-5) ... Setting up libctf0:armhf (2.41-7ubuntu1) ... Setting up pinentry-curses (1.2.1-3ubuntu1) ... Setting up libreadline8:armhf (8.2-3) ... Setting up systemd (253.5-1ubuntu7) ... Initializing machine ID from random generator. Setting up optipng (0.7.7-3) ... 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Processing triggers for debianutils (5.14) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-27033351 armhf noble-proposed -c chroot:build-PACKAGEBUILD-27033351 --arch=armhf --dist=noble-proposed --nolog r-bioc-fmcsr_1.44.0+dfsg-1.dsc Initiating build PACKAGEBUILD-27033351 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-167-generic #184-Ubuntu SMP Tue Oct 31 09:24:51 UTC 2023 armv7l sbuild (Debian sbuild) 0.79.0 (05 February 2020) on bos03-arm64-012.buildd +==============================================================================+ | r-bioc-fmcsr 1.44.0+dfsg-1 (armhf) Thu, 30 Nov 2023 11:12:31 +0000 | +==============================================================================+ Package: r-bioc-fmcsr Version: 1.44.0+dfsg-1 Source Version: 1.44.0+dfsg-1 Distribution: noble-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-27033351/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/r-bioc-fmcsr-V6gi6v/resolver-tQRBzS' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- r-bioc-fmcsr_1.44.0+dfsg-1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/r-bioc-fmcsr-V6gi6v/r-bioc-fmcsr-1.44.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/r-bioc-fmcsr-V6gi6v' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-chemminer, r-cran-runit, r-bioc-biocgenerics, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-chemminer, r-cran-runit, r-bioc-biocgenerics, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [407 B] Get:5 copy:/<>/apt_archive ./ Packages [489 B] Fetched 1853 B in 0s (73.5 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: apt-utils bash-completion debconf-i18n krb5-locales libgpg-error-l10n libgpm2 liblocale-gettext-perl libnss-nis libnss-nisplus libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libunistring2 psmisc uuid-runtime Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev dctrl-tools debhelper debugedit dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax fonts-noto-core fonts-noto-mono gettext gettext-base gfortran gfortran-13 groff-base icu-devtools intltool-debian javascript-common libalgorithm-c3-perl libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl libblas-dev libblas3 libboost1.81-dev libbrotli1 libbsd0 libbz2-dev libcairo-gobject2 libcairo2 libclass-c3-perl libclass-load-perl libclass-load-xs-perl libclone-perl libcurl3-gnutls libcurl4 libdata-optlist-perl libdatrie1 libdebhelper-perl libdeflate0 libdevel-callchecker-perl libdevel-globaldestruction-perl libdevel-overloadinfo-perl libdevel-stacktrace-perl libdist-checkconflicts-perl libdw1 libdynaloader-functions-perl libelf1 libencode-locale-perl libeval-closure-perl libexpat1 libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran-13-dev libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhttp-date-perl libhttp-message-perl libice6 libicu-dev libicu72 libio-html-perl libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 libldap2 liblerc4 liblua5.3-0 liblwp-mediatypes-perl liblzma-dev libmagic-mgc libmagic1 libmodule-implementation-perl libmodule-runtime-conflicts-perl libmodule-runtime-perl libmoose-perl libmro-compat-perl libnamespace-clean-perl libncurses-dev libncurses6 libnghttp2-14 libpackage-deprecationmanager-perl libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl libparams-util-perl libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpipeline1 libpixman-1-0 libpkgconf3 libpng-dev libpsl5 libreadline-dev librsvg2-2 librtmp1 libsasl2-2 libsasl2-modules-db libsharpyuv0 libsm6 libssh-4 libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff6 libtimedate-perl libtk8.6 libtool libtry-tiny-perl libuchardet0 liburi-perl libuv1 libvariable-magic-perl libwebp7 libwww-curl-perl libwww-curl-simple-perl libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 libyaml-0-2 m4 man-db node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data pkg-config pkgconf pkgconf-bin po-debconf r-base-core r-base-dev r-bioc-biocgenerics r-bioc-chemminer r-cran-base64enc r-cran-bh r-cran-bitops r-cran-bslib r-cran-cachem r-cran-cli r-cran-colorspace r-cran-commonmark r-cran-crayon r-cran-crosstalk r-cran-dbi r-cran-digest r-cran-dt r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fontawesome r-cran-fs r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-png r-cran-promises r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsvg r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-tibble r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml shared-mime-info ucf unzip x11-common xauth xdg-utils zip zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc debtags dh-make postgresql-client-common gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc gfortran-13-doc libcoarrays-dev groff apache2 | lighttpd | httpd liblapack-doc libboost1.81-doc libboost-atomic1.81-dev libboost-chrono1.81-dev libboost-container1.81-dev libboost-context1.81-dev libboost-contract1.81-dev libboost-coroutine1.81-dev libboost-date-time1.81-dev libboost-exception1.81-dev libboost-fiber1.81-dev libboost-filesystem1.81-dev libboost-graph1.81-dev libboost-graph-parallel1.81-dev libboost-iostreams1.81-dev libboost-locale1.81-dev libboost-log1.81-dev libboost-math1.81-dev libboost-mpi1.81-dev libboost-mpi-python1.81-dev libboost-numpy1.81-dev libboost-program-options1.81-dev libboost-python1.81-dev libboost-random1.81-dev libboost-regex1.81-dev libboost-serialization1.81-dev libboost-stacktrace1.81-dev libboost-system1.81-dev libboost-test1.81-dev libboost-thread1.81-dev libboost-timer1.81-dev libboost-type-erasure1.81-dev libboost-wave1.81-dev libboost1.81-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.81-dev low-memory-monitor libio-compress-brotli-perl icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc liblzma-doc ncurses-doc libscalar-number-perl readline-doc librsvg2-bin tcl8.6 tk8.6 libtool-doc gcj-jdk libbusiness-isbn-perl libregexp-ipv6-perl libwww-perl libcurl4-gnutls-dev m4-doc apparmor less www-browser nodejs texlive-latex-recommended texlive-xetex texlive-luatex pandoc-citeproc texlive-latex-extra context wkhtmltopdf ghc php python ruby libjs-katex citation-style-language-styles libmail-box-perl elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo r-bioc-biobase r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-rsqlite r-cran-scatterplot3d r-cran-gplots r-bioc-fmcsr r-cran-snow r-cran-rpostgresql r-bioc-biocstyle r-cran-biocmanager r-cran-bibtex r-cran-callr r-cran-covr r-cran-processx r-cran-ps r-cran-rprojroot r-cran-rstudioapi r-cran-whoami r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-dplyr r-cran-jpeg r-cran-viridis r-cran-curl r-cran-testthat r-cran-xml2 r-cran-rmysql r-cran-forcats r-cran-r.utils r-cran-waldo r-cran-markdown r-cran-magick r-cran-sf r-cran-getopt r-cran-httr r-cran-bit64 r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-survival r-cran-units r-cran-vdiffr r-cran-roxygen2 r-cran-inline r-cran-dichromat r-cran-bench r-cran-blob r-cran-brio r-cran-here r-cran-hms r-cran-pkgbuild r-cran-pkgload r-cran-purrr r-cran-tidyr r-cran-plm r-cran-zoo Recommended packages: devscripts cme git-buildpackage curl | wget | lynx bzip2-doc libclass-c3-xs-perl libdevel-lexalias-perl libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs node-jquery libldap-common libdevel-partialdump-perl libpng-tools publicsuffix librsvg2-common libsasl2-modules libltdl-dev libmail-sendmail-perl r-recommended r-doc-html r-cran-curl r-cran-testthat r-cran-thematic r-cran-mockery r-cran-future r-cran-testit w3m | www-browser r-cran-covr r-cran-unitizer r-cran-dplyr r-cran-spelling r-cran-hexbin r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp r-cran-profvis r-cran-quantreg r-cran-ragg r-cran-rpart r-cran-sf r-cran-svglite r-cran-vdiffr r-cran-xml2 r-cran-cairo r-cran-markdown r-cran-callr r-cran-httr r-cran-r.rsp r-cran-codetools r-cran-formatr r-cran-gridsvg r-cran-jpeg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-webshot r-cran-rstudioapi node-highlight.js r-cran-lintr r-cran-tidyverse r-cran-lubridate r-cran-purrr r-cran-xml r-cran-usethis r-cran-dygraphs r-cran-rsconnect r-cran-downlit r-cran-bit64 r-cran-hms r-cran-data.table r-cran-rsqlite r-cran-mockr r-cran-formattable r-cran-generics r-cran-pkgdown r-cran-waldo r-cran-zeallot r-cran-remotes r-cran-renv libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev dctrl-tools debhelper debugedit dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax fonts-noto-core fonts-noto-mono gettext gettext-base gfortran gfortran-13 groff-base icu-devtools intltool-debian javascript-common libalgorithm-c3-perl libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl libblas-dev libblas3 libboost1.81-dev libbrotli1 libbsd0 libbz2-dev libcairo-gobject2 libcairo2 libclass-c3-perl libclass-load-perl libclass-load-xs-perl libclone-perl libcurl3-gnutls libcurl4 libdata-optlist-perl libdatrie1 libdebhelper-perl libdeflate0 libdevel-callchecker-perl libdevel-globaldestruction-perl libdevel-overloadinfo-perl libdevel-stacktrace-perl libdist-checkconflicts-perl libdw1 libdynaloader-functions-perl libelf1 libencode-locale-perl libeval-closure-perl libexpat1 libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran-13-dev libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhttp-date-perl libhttp-message-perl libice6 libicu-dev libicu72 libio-html-perl libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 libldap2 liblerc4 liblua5.3-0 liblwp-mediatypes-perl liblzma-dev libmagic-mgc libmagic1 libmodule-implementation-perl libmodule-runtime-conflicts-perl libmodule-runtime-perl libmoose-perl libmro-compat-perl libnamespace-clean-perl libncurses-dev libncurses6 libnghttp2-14 libpackage-deprecationmanager-perl libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl libparams-util-perl libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpipeline1 libpixman-1-0 libpkgconf3 libpng-dev libpsl5 libreadline-dev librsvg2-2 librtmp1 libsasl2-2 libsasl2-modules-db libsharpyuv0 libsm6 libssh-4 libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff6 libtimedate-perl libtk8.6 libtool libtry-tiny-perl libuchardet0 liburi-perl libuv1 libvariable-magic-perl libwebp7 libwww-curl-perl libwww-curl-simple-perl libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 libyaml-0-2 m4 man-db node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data pkg-config pkgconf pkgconf-bin po-debconf r-base-core r-base-dev r-bioc-biocgenerics r-bioc-chemminer r-cran-base64enc r-cran-bh r-cran-bitops r-cran-bslib r-cran-cachem r-cran-cli r-cran-colorspace r-cran-commonmark r-cran-crayon r-cran-crosstalk r-cran-dbi r-cran-digest r-cran-dt r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fontawesome r-cran-fs r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-png r-cran-promises r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsvg r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-tibble r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml sbuild-build-depends-main-dummy shared-mime-info ucf unzip x11-common xauth xdg-utils zip zlib1g-dev 0 upgraded, 284 newly installed, 0 to remove and 0 not upgraded. Need to get 207 MB of archives. After this operation, 800 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [702 B] Get:2 http://ftpmaster.internal/ubuntu noble/main armhf libbsd0 armhf 0.11.7-4 [36.9 kB] Get:3 http://ftpmaster.internal/ubuntu noble/main armhf libelf1 armhf 0.190-1 [49.8 kB] Get:4 http://ftpmaster.internal/ubuntu noble/main armhf libexpat1 armhf 2.5.0-2 [63.7 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf libfribidi0 armhf 1.0.13-3 [24.0 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main armhf libglib2.0-0 armhf 2.78.1-4 [1403 kB] Get:7 http://ftpmaster.internal/ubuntu noble/main armhf libicu72 armhf 72.1-3ubuntu3 [10.5 MB] Get:8 http://ftpmaster.internal/ubuntu noble/main armhf libxml2 armhf 2.9.14+dfsg-1.3build2 [597 kB] Get:9 http://ftpmaster.internal/ubuntu noble/main armhf libyaml-0-2 armhf 0.2.5-1 [46.4 kB] Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main armhf shared-mime-info armhf 2.4-1 [463 kB] Get:11 http://ftpmaster.internal/ubuntu noble/main armhf ucf all 3.0043+nmu1 [56.5 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main armhf libmagic-mgc armhf 1:5.45-2 [307 kB] Get:13 http://ftpmaster.internal/ubuntu noble/main armhf libmagic1 armhf 1:5.45-2 [80.9 kB] Get:14 http://ftpmaster.internal/ubuntu noble/main armhf file armhf 1:5.45-2 [21.1 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main armhf gettext-base armhf 0.21-13build1 [37.7 kB] Get:16 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libuchardet0 armhf 0.0.8-1 [73.9 kB] Get:17 http://ftpmaster.internal/ubuntu noble/main armhf groff-base armhf 1.23.0-3 [948 kB] Get:18 http://ftpmaster.internal/ubuntu noble/main armhf libncurses6 armhf 6.4+20231121-1build1 [88.0 kB] Get:19 http://ftpmaster.internal/ubuntu noble/main armhf libnghttp2-14 armhf 1.58.0-1 [68.2 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main armhf libpipeline1 armhf 1.5.7-1 [26.2 kB] Get:21 http://ftpmaster.internal/ubuntu noble/main armhf libpsl5 armhf 0.21.2-1build1 [55.5 kB] Get:22 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libuv1 armhf 1.46.0-2 [80.3 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main armhf libxau6 armhf 1:1.0.9-1build5 [6622 B] Get:24 http://ftpmaster.internal/ubuntu noble/main armhf libxdmcp6 armhf 1:1.1.3-0ubuntu5 [9452 B] Get:25 http://ftpmaster.internal/ubuntu noble/main armhf libxcb1 armhf 1.15-1 [45.4 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main armhf libx11-data all 2:1.8.7-1 [115 kB] Get:27 http://ftpmaster.internal/ubuntu noble/main armhf libx11-6 armhf 2:1.8.7-1 [585 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main armhf libxext6 armhf 2:1.3.4-1build1 [26.4 kB] Get:29 http://ftpmaster.internal/ubuntu noble/main armhf libxmuu1 armhf 2:1.1.3-3 [9288 B] Get:30 http://ftpmaster.internal/ubuntu noble-proposed/main armhf man-db armhf 2.12.0-1 [1195 kB] Get:31 http://ftpmaster.internal/ubuntu noble/main armhf xauth armhf 1:1.1.2-1 [22.9 kB] Get:32 http://ftpmaster.internal/ubuntu noble/main armhf m4 armhf 1.4.19-4 [235 kB] Get:33 http://ftpmaster.internal/ubuntu noble/main armhf autoconf all 2.71-3 [339 kB] Get:34 http://ftpmaster.internal/ubuntu noble/main armhf autotools-dev all 20220109.1 [44.9 kB] Get:35 http://ftpmaster.internal/ubuntu noble/main armhf automake all 1:1.16.5-1.3 [558 kB] Get:36 http://ftpmaster.internal/ubuntu noble/main armhf autopoint all 0.21-13build1 [422 kB] Get:37 http://ftpmaster.internal/ubuntu noble/main armhf dctrl-tools armhf 2.24-3build2 [57.2 kB] Get:38 http://ftpmaster.internal/ubuntu noble/main armhf libdebhelper-perl all 13.11.8ubuntu1 [85.9 kB] Get:39 http://ftpmaster.internal/ubuntu noble/main armhf libtool all 2.4.7-7 [166 kB] Get:40 http://ftpmaster.internal/ubuntu noble/main armhf dh-autoreconf all 20 [16.1 kB] Get:41 http://ftpmaster.internal/ubuntu noble/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] Get:42 http://ftpmaster.internal/ubuntu noble/main armhf libsub-override-perl all 0.09-4 [8706 B] Get:43 http://ftpmaster.internal/ubuntu noble/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [18.1 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main armhf dh-strip-nondeterminism all 1.13.1-1 [5362 B] Get:45 http://ftpmaster.internal/ubuntu noble/main armhf libdw1 armhf 0.190-1 [235 kB] Get:46 http://ftpmaster.internal/ubuntu noble/main armhf debugedit armhf 1:5.0-5 [42.8 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main armhf dwz armhf 0.15-1 [109 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main armhf gettext armhf 0.21-13build1 [799 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main armhf po-debconf all 1.0.21+nmu1 [233 kB] Get:51 http://ftpmaster.internal/ubuntu noble/main armhf debhelper all 13.11.8ubuntu1 [940 kB] Get:52 http://ftpmaster.internal/ubuntu noble/main armhf zip armhf 3.0-13 [162 kB] Get:53 http://ftpmaster.internal/ubuntu noble/main armhf unzip armhf 6.0-28ubuntu1 [162 kB] Get:54 http://ftpmaster.internal/ubuntu noble/main armhf libpaper1 armhf 1.1.29 [12.5 kB] Get:55 http://ftpmaster.internal/ubuntu noble/main armhf libpaper-utils armhf 1.1.29 [8170 B] Get:56 http://ftpmaster.internal/ubuntu noble/main armhf xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] Get:57 http://ftpmaster.internal/ubuntu noble/main armhf libblas3 armhf 3.11.0-2build1 [123 kB] Get:58 http://ftpmaster.internal/ubuntu noble/main armhf libbrotli1 armhf 1.1.0-2 [318 kB] Get:59 http://ftpmaster.internal/ubuntu noble/main armhf libfreetype6 armhf 2.13.2+dfsg-1 [331 kB] Get:60 http://ftpmaster.internal/ubuntu noble/main armhf fonts-noto-mono all 20201225-2 [435 kB] Get:61 http://ftpmaster.internal/ubuntu noble/main armhf fonts-noto-core all 20201225-2 [13.3 MB] Get:62 http://ftpmaster.internal/ubuntu noble/main armhf fontconfig-config armhf 2.14.2-4ubuntu1 [35.8 kB] Get:63 http://ftpmaster.internal/ubuntu noble/main armhf libfontconfig1 armhf 2.14.2-4ubuntu1 [112 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main armhf libpixman-1-0 armhf 0.42.2-1 [184 kB] Get:65 http://ftpmaster.internal/ubuntu noble/main armhf libxcb-render0 armhf 1.15-1 [15.2 kB] Get:66 http://ftpmaster.internal/ubuntu noble/main armhf libxcb-shm0 armhf 1.15-1 [5852 B] Get:67 http://ftpmaster.internal/ubuntu noble/main armhf libxrender1 armhf 1:0.9.10-1.1 [16.5 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main armhf libcairo2 armhf 1.18.0-1 [481 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-4 [19.0 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-2 armhf 2.1.28+dfsg1-4 [49.8 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main armhf libldap2 armhf 2.6.6+dfsg-1~exp1ubuntu1 [170 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build4 [52.8 kB] Get:73 http://ftpmaster.internal/ubuntu noble/main armhf libssh-4 armhf 0.10.5-3ubuntu1 [166 kB] Get:74 http://ftpmaster.internal/ubuntu noble/main armhf libcurl4 armhf 8.4.0-2ubuntu1 [294 kB] Get:75 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg-turbo8 armhf 2.1.5-2ubuntu1 [123 kB] Get:76 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] Get:77 http://ftpmaster.internal/ubuntu noble/main armhf libgfortran5 armhf 13.2.0-7ubuntu1 [300 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main armhf liblapack3 armhf 3.11.0-2build1 [1988 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main armhf fontconfig armhf 2.14.2-4ubuntu1 [189 kB] Get:80 http://ftpmaster.internal/ubuntu noble/main armhf libgraphite2-3 armhf 1.3.14-1build2 [65.2 kB] Get:81 http://ftpmaster.internal/ubuntu noble/main armhf libharfbuzz0b armhf 8.0.1-1 [433 kB] Get:82 http://ftpmaster.internal/ubuntu noble/main armhf libthai-data all 0.1.29-1build1 [162 kB] Get:83 http://ftpmaster.internal/ubuntu noble/main armhf libdatrie1 armhf 0.2.13-2 [16.8 kB] Get:84 http://ftpmaster.internal/ubuntu noble/main armhf libthai0 armhf 0.1.29-1build1 [15.8 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main armhf libpango-1.0-0 armhf 1.51.0+ds-3 [206 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main armhf libpangoft2-1.0-0 armhf 1.51.0+ds-3 [36.4 kB] Get:87 http://ftpmaster.internal/ubuntu noble/main armhf libpangocairo-1.0-0 armhf 1.51.0+ds-3 [25.5 kB] Get:88 http://ftpmaster.internal/ubuntu noble/main armhf libtcl8.6 armhf 8.6.13+dfsg-2 [902 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main armhf libdeflate0 armhf 1.18-1 [40.7 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main armhf libjbig0 armhf 2.1-6.1ubuntu1 [24.9 kB] Get:91 http://ftpmaster.internal/ubuntu noble/main armhf liblerc4 armhf 4.0.0+ds-2ubuntu2 [151 kB] Get:92 http://ftpmaster.internal/ubuntu noble/main armhf libsharpyuv0 armhf 1.3.2-0.3 [13.3 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main armhf libwebp7 armhf 1.3.2-0.3 [183 kB] Get:94 http://ftpmaster.internal/ubuntu noble/main armhf libtiff6 armhf 4.5.1+git230720-1ubuntu1 [177 kB] Get:95 http://ftpmaster.internal/ubuntu noble/main armhf libxft2 armhf 2.3.6-1 [36.8 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main armhf x11-common all 1:7.7+23ubuntu2 [23.4 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main armhf libxss1 armhf 1:1.2.3-1build2 [7580 B] Get:98 http://ftpmaster.internal/ubuntu noble/main armhf libtk8.6 armhf 8.6.13-2 [680 kB] Get:99 http://ftpmaster.internal/ubuntu noble/main armhf libice6 armhf 2:1.0.10-1build2 [36.4 kB] Get:100 http://ftpmaster.internal/ubuntu noble/main armhf libsm6 armhf 2:1.2.3-1build2 [15.1 kB] Get:101 http://ftpmaster.internal/ubuntu noble/main armhf libxt6 armhf 1:1.2.1-1.1 [142 kB] Get:102 http://ftpmaster.internal/ubuntu noble/universe armhf r-base-core armhf 4.3.2-1 [26.6 MB] Get:103 http://ftpmaster.internal/ubuntu noble/main armhf libgfortran-13-dev armhf 13.2.0-7ubuntu1 [359 kB] Get:104 http://ftpmaster.internal/ubuntu noble/main armhf gfortran-13 armhf 13.2.0-7ubuntu1 [8801 kB] Get:105 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gfortran armhf 4:13.2.0-2ubuntu1 [1176 B] Get:106 http://ftpmaster.internal/ubuntu noble/main armhf libblas-dev armhf 3.11.0-2build1 [132 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main armhf liblapack-dev armhf 3.11.0-2build1 [2059 kB] Get:108 http://ftpmaster.internal/ubuntu noble/main armhf libncurses-dev armhf 6.4+20231121-1build1 [502 kB] Get:109 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libreadline-dev armhf 8.2-3 [153 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg-turbo8-dev armhf 2.1.5-2ubuntu1 [263 kB] Get:111 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg8-dev armhf 8c-2ubuntu11 [1484 B] Get:112 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg-dev armhf 8c-2ubuntu11 [1482 B] Get:113 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-16-0 armhf 10.42-4 [180 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-32-0 armhf 10.42-4 [170 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-posix3 armhf 10.42-4 [6094 B] Get:116 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-dev armhf 10.42-4 [664 kB] Get:117 http://ftpmaster.internal/ubuntu noble-proposed/main armhf zlib1g-dev armhf 1:1.3.dfsg-3ubuntu1 [882 kB] Get:118 http://ftpmaster.internal/ubuntu noble/main armhf libpng-dev armhf 1.6.40-2 [248 kB] Get:119 http://ftpmaster.internal/ubuntu noble/main armhf libbz2-dev armhf 1.0.8-5build1 [29.8 kB] Get:120 http://ftpmaster.internal/ubuntu noble/main armhf liblzma-dev armhf 5.4.5-0.1 [166 kB] Get:121 http://ftpmaster.internal/ubuntu noble/main armhf icu-devtools armhf 72.1-3ubuntu3 [199 kB] Get:122 http://ftpmaster.internal/ubuntu noble/main armhf libicu-dev armhf 72.1-3ubuntu3 [11.6 MB] Get:123 http://ftpmaster.internal/ubuntu noble/main armhf libpkgconf3 armhf 1.8.1-2 [26.3 kB] Get:124 http://ftpmaster.internal/ubuntu noble/main armhf pkgconf-bin armhf 1.8.1-2 [20.6 kB] Get:125 http://ftpmaster.internal/ubuntu noble/main armhf pkgconf armhf 1.8.1-2 [16.7 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main armhf pkg-config armhf 1.8.1-2 [7170 B] Get:127 http://ftpmaster.internal/ubuntu noble/universe armhf r-base-dev all 4.3.2-1 [4334 B] Get:128 http://ftpmaster.internal/ubuntu noble/main armhf libfile-which-perl all 1.27-2 [12.5 kB] Get:129 http://ftpmaster.internal/ubuntu noble/universe armhf libswitch-perl all 2.17-3 [18.9 kB] Get:130 http://ftpmaster.internal/ubuntu noble/main armhf libclone-perl armhf 0.46-1 [10.0 kB] Get:131 http://ftpmaster.internal/ubuntu noble/main armhf libencode-locale-perl all 1.05-3 [11.6 kB] Get:132 http://ftpmaster.internal/ubuntu noble/main armhf libtimedate-perl all 2.3300-2 [34.0 kB] Get:133 http://ftpmaster.internal/ubuntu noble/main armhf libhttp-date-perl all 6.06-1 [10.2 kB] Get:134 http://ftpmaster.internal/ubuntu noble/main armhf libio-html-perl all 1.004-3 [15.9 kB] Get:135 http://ftpmaster.internal/ubuntu noble/main armhf liblwp-mediatypes-perl all 6.04-2 [20.1 kB] Get:136 http://ftpmaster.internal/ubuntu noble/main armhf liburi-perl all 5.21-1 [85.4 kB] Get:137 http://ftpmaster.internal/ubuntu noble/main armhf libhttp-message-perl all 6.44-2ubuntu1 [78.0 kB] Get:138 http://ftpmaster.internal/ubuntu noble/main armhf libparams-util-perl armhf 1.102-2 [20.5 kB] Get:139 http://ftpmaster.internal/ubuntu noble/main armhf libsub-install-perl all 0.929-1 [9764 B] Get:140 http://ftpmaster.internal/ubuntu noble/main armhf libdata-optlist-perl all 0.114-1 [9708 B] Get:141 http://ftpmaster.internal/ubuntu noble/main armhf libb-hooks-op-check-perl armhf 0.22-2build1 [9160 B] Get:142 http://ftpmaster.internal/ubuntu noble/main armhf libdynaloader-functions-perl all 0.003-3 [12.1 kB] Get:143 http://ftpmaster.internal/ubuntu noble/main armhf libdevel-callchecker-perl armhf 0.008-2 [13.6 kB] Get:144 http://ftpmaster.internal/ubuntu noble/main armhf libparams-classify-perl armhf 0.015-2build2 [19.4 kB] Get:145 http://ftpmaster.internal/ubuntu noble/main armhf libmodule-runtime-perl all 0.016-2 [16.4 kB] Get:146 http://ftpmaster.internal/ubuntu noble/main armhf libtry-tiny-perl all 0.31-2 [20.8 kB] Get:147 http://ftpmaster.internal/ubuntu noble/main armhf libmodule-implementation-perl all 0.09-2 [12.0 kB] Get:148 http://ftpmaster.internal/ubuntu noble/main armhf libpackage-stash-perl all 0.40-1 [19.5 kB] Get:149 http://ftpmaster.internal/ubuntu noble/universe armhf libclass-load-perl all 0.25-2 [12.7 kB] Get:150 http://ftpmaster.internal/ubuntu noble/universe armhf libclass-load-xs-perl armhf 0.10-2build1 [13.1 kB] Get:151 http://ftpmaster.internal/ubuntu noble/main armhf libsub-exporter-progressive-perl all 0.001013-3 [6718 B] Get:152 http://ftpmaster.internal/ubuntu noble/universe armhf libdevel-globaldestruction-perl all 0.14-4 [6114 B] Get:153 http://ftpmaster.internal/ubuntu noble/universe armhf libalgorithm-c3-perl all 0.11-2 [10.2 kB] Get:154 http://ftpmaster.internal/ubuntu noble/universe armhf libclass-c3-perl all 0.35-2 [18.4 kB] Get:155 http://ftpmaster.internal/ubuntu noble/universe armhf libmro-compat-perl all 0.15-2 [10.1 kB] Get:156 http://ftpmaster.internal/ubuntu noble/universe armhf libdevel-overloadinfo-perl all 0.007-1 [7422 B] Get:157 http://ftpmaster.internal/ubuntu noble/main armhf libdevel-stacktrace-perl all 2.0400-2 [22.2 kB] Get:158 http://ftpmaster.internal/ubuntu noble/main armhf libsub-exporter-perl all 0.990-1 [49.0 kB] Get:159 http://ftpmaster.internal/ubuntu noble/universe armhf libeval-closure-perl all 0.14-3 [10.1 kB] Get:160 http://ftpmaster.internal/ubuntu noble/universe armhf libdist-checkconflicts-perl all 0.11-2 [9942 B] Get:161 http://ftpmaster.internal/ubuntu noble/universe armhf libmodule-runtime-conflicts-perl all 0.003-2 [6956 B] Get:162 http://ftpmaster.internal/ubuntu noble/universe armhf libpackage-deprecationmanager-perl all 0.18-1 [16.7 kB] Get:163 http://ftpmaster.internal/ubuntu noble/main armhf libpackage-stash-xs-perl armhf 0.30-1build1 [17.2 kB] Get:164 http://ftpmaster.internal/ubuntu noble/universe armhf libmoose-perl armhf 2.2206-1 [748 kB] Get:165 http://ftpmaster.internal/ubuntu noble/main armhf libvariable-magic-perl armhf 0.63-1 [32.2 kB] Get:166 http://ftpmaster.internal/ubuntu noble/main armhf libb-hooks-endofscope-perl all 0.26-1 [17.8 kB] Get:167 http://ftpmaster.internal/ubuntu noble/main armhf libsub-identify-perl armhf 0.14-3 [9386 B] Get:168 http://ftpmaster.internal/ubuntu noble/main armhf libsub-name-perl armhf 0.27-1 [10.3 kB] Get:169 http://ftpmaster.internal/ubuntu noble/main armhf libnamespace-clean-perl all 0.27-2 [14.0 kB] Get:170 http://ftpmaster.internal/ubuntu noble/main armhf libcurl3-gnutls armhf 8.4.0-2ubuntu1 [289 kB] Get:171 http://ftpmaster.internal/ubuntu noble/universe armhf libwww-curl-perl armhf 4.17-10 [54.7 kB] Get:172 http://ftpmaster.internal/ubuntu noble/universe armhf libwww-curl-simple-perl all 0.100191-3 [11.2 kB] Get:173 http://ftpmaster.internal/ubuntu noble/universe armhf dh-r all 20230707ubuntu1 [39.1 kB] Get:174 http://ftpmaster.internal/ubuntu noble/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] Get:175 http://ftpmaster.internal/ubuntu noble/universe armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] Get:176 http://ftpmaster.internal/ubuntu noble/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] Get:177 http://ftpmaster.internal/ubuntu noble/main armhf javascript-common all 11+nmu1 [5936 B] Get:178 http://ftpmaster.internal/ubuntu noble/universe armhf libboost1.81-dev armhf 1.81.0-7build1 [10.5 MB] Get:179 http://ftpmaster.internal/ubuntu noble/main armhf libcairo-gobject2 armhf 1.18.0-1 [125 kB] Get:180 http://ftpmaster.internal/ubuntu noble/main armhf libgdk-pixbuf2.0-common all 2.42.10+dfsg-3 [7624 B] Get:181 http://ftpmaster.internal/ubuntu noble/main armhf libgdk-pixbuf-2.0-0 armhf 2.42.10+dfsg-3 [135 kB] Get:182 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] Get:183 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-popper.js all 1.16.1+ds-6 [54.1 kB] Get:184 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] Get:185 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-d3 all 3.5.17-4 [132 kB] Get:186 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-es5-shim all 4.6.7-2 [39.8 kB] Get:187 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] Get:188 http://ftpmaster.internal/ubuntu noble/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] Get:189 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] Get:190 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] Get:191 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] Get:192 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] Get:193 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] Get:194 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] Get:195 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] Get:196 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] Get:197 http://ftpmaster.internal/ubuntu noble/universe armhf liblua5.3-0 armhf 5.3.6-2 [109 kB] Get:198 http://ftpmaster.internal/ubuntu noble/main armhf librsvg2-2 armhf 2.54.7+dfsg-2 [2630 kB] Get:199 http://ftpmaster.internal/ubuntu noble/universe armhf node-bootstrap-sass all 3.4.3-2 [187 kB] Get:200 http://ftpmaster.internal/ubuntu noble/universe armhf node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] Get:201 http://ftpmaster.internal/ubuntu noble/universe armhf node-normalize.css all 8.0.1-5 [10.8 kB] Get:202 http://ftpmaster.internal/ubuntu noble/universe armhf pandoc-data all 2.17.1.1-3ubuntu1 [82.9 kB] Get:203 http://ftpmaster.internal/ubuntu noble/universe armhf pandoc armhf 2.17.1.1-3ubuntu1 [29.0 MB] Get:204 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-bioc-biocgenerics all 0.48.1-1 [595 kB] Get:205 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-littler armhf 0.3.18-2 [86.9 kB] Get:206 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rjson armhf 0.2.21-1 [142 kB] Get:207 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-bitops armhf 1.0-7-1 [29.4 kB] Get:208 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rcurl armhf 1.98-1.13+dfsg-1 [790 kB] Get:209 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-dbi all 1.1.3-1 [686 kB] Get:210 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-digest armhf 0.6.33-1 [180 kB] Get:211 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-pkgkitten all 0.2.3-1 [25.1 kB] Get:212 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rcpp armhf 1.0.11-1 [1958 kB] Get:213 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-cli armhf 3.6.1-1 [1308 kB] Get:214 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-glue armhf 1.6.2-1 [147 kB] Get:215 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rlang armhf 1.1.2-1 [1658 kB] Get:216 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] Get:217 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-gtable all 0.3.4+dfsg-1 [191 kB] Get:218 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-isoband armhf 0.2.7-1 [1477 kB] Get:219 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-mass armhf 7.3-60-2 [1116 kB] Get:220 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-lattice armhf 0.22-5-1 [1341 kB] Get:221 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-nlme armhf 3.1.163-1 [2253 kB] Get:222 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-matrix armhf 1.6-3-1 [3758 kB] Get:223 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-mgcv armhf 1.9-0-1 [3163 kB] Get:224 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-farver armhf 2.1.1-1 [1346 kB] Get:225 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-labeling all 0.4.3-1 [62.1 kB] Get:226 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-colorspace armhf 2.1-0+dfsg-1 [1538 kB] Get:227 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-munsell all 0.5.0-2build1 [208 kB] Get:228 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-r6 all 2.5.1-1 [99.0 kB] Get:229 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] Get:230 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-viridislite all 0.4.2-2 [1088 kB] Get:231 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-scales all 1.2.1-1 [544 kB] Get:232 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-fansi armhf 1.0.5-1 [611 kB] Get:233 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-magrittr armhf 2.0.3-1 [154 kB] Get:234 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-utf8 armhf 1.2.4-1 [136 kB] Get:235 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-vctrs armhf 0.6.4-1 [1307 kB] Get:236 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-pillar all 1.9.0+dfsg-1 [464 kB] Get:237 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] Get:238 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-tibble armhf 3.2.1+dfsg-2 [415 kB] Get:239 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-withr all 2.5.0-1 [225 kB] Get:240 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] Get:241 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-gridextra all 2.3-3build1 [1024 kB] Get:242 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-png armhf 0.1-8-1 [39.6 kB] Get:243 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-base64enc armhf 0.1-3-3 [27.3 kB] Get:244 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-ellipsis armhf 0.3.2-2 [35.0 kB] Get:245 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-fastmap armhf 1.1.1-1 [68.1 kB] Get:246 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-htmltools armhf 0.5.7-1 [368 kB] Get:247 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-jsonlite armhf 1.8.7+dfsg-1 [437 kB] Get:248 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-evaluate all 0.23-1 [90.2 kB] Get:249 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-xfun armhf 0.41+dfsg-1 [415 kB] Get:250 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-highr all 0.10+dfsg-1 [38.3 kB] Get:251 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-yaml armhf 2.3.7-1 [96.7 kB] Get:252 http://ftpmaster.internal/ubuntu noble/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] Get:253 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-knitr all 1.45+dfsg-1 [917 kB] Get:254 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-cachem armhf 1.0.8-1 [72.0 kB] Get:255 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] Get:256 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-memoise all 2.0.1-1 [53.9 kB] Get:257 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-mime armhf 0.12-1 [35.5 kB] Get:258 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-fs armhf 1.6.3+dfsg-1 [226 kB] Get:259 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rappdirs armhf 0.3.3-1 [47.4 kB] Get:260 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-sass armhf 0.4.7+dfsg-1 [920 kB] Get:261 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-bslib all 0.6.0+dfsg-1 [4895 kB] Get:262 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-fontawesome all 0.5.2-1 [1300 kB] Get:263 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-stringi armhf 1.8.2-1 [859 kB] Get:264 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-stringr all 1.5.1-1 [290 kB] Get:265 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-tinytex all 0.49-1 [141 kB] Get:266 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] Get:267 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-later armhf 1.3.1+dfsg-1 [115 kB] Get:268 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-promises armhf 1.2.1+dfsg-1 [281 kB] Get:269 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-httpuv armhf 1.6.12+dfsg-1 [489 kB] Get:270 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-xtable all 1:1.8-4-2 [689 kB] Get:271 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-sourcetools armhf 0.1.7-1-1 [45.7 kB] Get:272 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-crayon all 1.5.2-1 [164 kB] Get:273 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-commonmark armhf 1.9.0-1 [109 kB] Get:274 http://ftpmaster.internal/ubuntu noble/universe armhf libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] Get:275 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] Get:276 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rmarkdown all 2.25+dfsg-1 [1480 kB] Get:277 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-htmlwidgets all 1.6.3+dfsg-1 [123 kB] Get:278 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-lazyeval armhf 0.2.2-1build1 [142 kB] Get:279 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] Get:280 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-dt all 0.30+dfsg-2 [239 kB] Get:281 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-rsvg armhf 2.6.0-1 [271 kB] Get:282 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-bh all 1.81.0-1 [5814 B] Get:283 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf r-bioc-chemminer armhf 3.54.0+dfsg-1 [1178 kB] Get:284 http://ftpmaster.internal/ubuntu noble/universe armhf r-cran-runit all 0.4.32-3 [283 kB] Preconfiguring packages ... Fetched 207 MB in 9s (22.3 MB/s) Selecting previously unselected package libbsd0:armhf. (Reading database ... 13388 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.11.7-4_armhf.deb ... Unpacking libbsd0:armhf (0.11.7-4) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../001-libelf1_0.190-1_armhf.deb ... Unpacking libelf1:armhf (0.190-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../002-libexpat1_2.5.0-2_armhf.deb ... Unpacking libexpat1:armhf (2.5.0-2) ... Selecting previously unselected package libfribidi0:armhf. Preparing to unpack .../003-libfribidi0_1.0.13-3_armhf.deb ... Unpacking libfribidi0:armhf (1.0.13-3) ... Selecting previously unselected package libglib2.0-0:armhf. Preparing to unpack .../004-libglib2.0-0_2.78.1-4_armhf.deb ... Unpacking libglib2.0-0:armhf (2.78.1-4) ... Selecting previously unselected package libicu72:armhf. 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Setting up libicu72:armhf (72.1-3ubuntu3) ... Setting up liblerc4:armhf (4.0.0+ds-2ubuntu2) ... Setting up fonts-noto-mono (20201225-2) ... Setting up libjs-mathjax (2.7.9+dfsg-1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libdatrie1:armhf (0.2.13-2) ... Setting up libjs-popper.js (1.16.1+ds-6) ... Setting up libmagic-mgc (1:5.45-2) ... Setting up libclone-perl:armhf (0.46-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:armhf (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libglib2.0-0:armhf (2.78.1-4) ... No schema files found: doing nothing. Setting up libjs-sifter.js (0.6.0+dfsg-3) ... Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... Setting up unzip (6.0-28ubuntu1) ... Setting up libdebhelper-perl (13.11.8ubuntu1) ... Setting up libbrotli1:armhf (1.1.0-2) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libgdk-pixbuf2.0-common (2.42.10+dfsg-3) ... 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Setting up xdg-utils (1.1.3-4.1ubuntu3) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libldap2:armhf (2.6.6+dfsg-1~exp1ubuntu1) ... Setting up liburi-perl (5.21-1) ... Setting up libblas-dev:armhf (3.11.0-2build1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode Setting up dctrl-tools (2.24-3build2) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libbz2-dev:armhf (1.0.8-5build1) ... Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... Setting up libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... Setting up libjpeg8:armhf (8c-2ubuntu11) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... 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Setting up libpango-1.0-0:armhf (1.51.0+ds-3) ... Setting up libjpeg-dev:armhf (8c-2ubuntu11) ... Setting up libxext6:armhf (2:1.3.4-1build1) ... Setting up libwww-curl-perl:armhf (4.17-10) ... Setting up man-db (2.12.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up gfortran (4:13.2.0-2ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:armhf (1.18.0-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libdist-checkconflicts-perl (0.11-2) ... Setting up libxt6:armhf (1:1.2.1-1.1) ... Setting up xauth (1:1.1.2-1) ... Setting up libcairo-gobject2:armhf (1.18.0-1) ... Setting up libxss1:armhf (1:1.2.3-1build2) ... Setting up libpangoft2-1.0-0:armhf (1.51.0+ds-3) ... 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Setting up r-cran-rmarkdown (2.25+dfsg-1) ... Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... Setting up r-cran-htmlwidgets (1.6.3+dfsg-1) ... Setting up r-cran-dt (0.30+dfsg-2) ... Setting up r-bioc-chemminer (3.54.0+dfsg-1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.38-3ubuntu1) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-167-generic #184-Ubuntu SMP Tue Oct 31 09:24:51 UTC 2023 arm64 (armv7l) Toolchain package versions: binutils_2.41-7ubuntu1 dpkg-dev_1.22.1ubuntu3 g++-13_13.2.0-7ubuntu1 gcc-13_13.2.0-7ubuntu1 libc6-dev_2.38-3ubuntu1 libstdc++-13-dev_13.2.0-7ubuntu1 libstdc++6_13.2.0-7ubuntu1 linux-libc-dev_6.6.0-13.13 Package versions: adduser_3.137ubuntu1 advancecomp_2.5-1 apt_2.7.7 apt-utils_2.7.7 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13build1 autotools-dev_20220109.1 base-files_13ubuntu5 base-passwd_3.6.3 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Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-27033351 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-27033351 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-27033351 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package r-bioc-fmcsr dpkg-buildpackage: info: source version 1.44.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary-arch dh binary-arch --buildsystem R dh_update_autotools_config -a -O--buildsystem=R dh_autoreconf -a -O--buildsystem=R configure.ac:32: warning: AC_OUTPUT should be used without arguments. configure.ac:32: You should run autoupdate. dh_auto_configure -a -O--buildsystem=R dh_auto_build -a -O--buildsystem=R dh_auto_test -a -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=R dh_prep -a -O--buildsystem=R dh_auto_install --destdir=debian/r-bioc-fmcsr/ -a -O--buildsystem=R I: R Package: fmcsR Version: 1.44.0 I: Building using R version 4.3.2-1 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Thu, 30 Nov 2023 08:10:16 +0100 mkdir -p /<>/r-bioc-fmcsr-1.44.0\+dfsg/debian/r-bioc-fmcsr/usr/lib/R/site-library R CMD INSTALL -l /<>/r-bioc-fmcsr-1.44.0\+dfsg/debian/r-bioc-fmcsr/usr/lib/R/site-library --clean . "--built-timestamp='Thu, 30 Nov 2023 08:10:16 +0100'" * installing *source* package ‘fmcsR’ ... ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ -std=gnu++17 accepts -g... yes checking for g++ -std=gnu++17 option to enable C++11 features... none needed checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for inline... inline checking for size_t... yes checking for alarm... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating config.h ** libs using C++ compiler: ‘g++ (Ubuntu 13.2.0-7ubuntu1) 13.2.0’ make[1]: Entering directory '/<>/src' g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=/usr/src/r-base-4.3.2-1 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c MCS.cpp -o MCS.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=/usr/src/r-base-4.3.2-1 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c MCSCompound.cpp -o MCSCompound.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=/usr/src/r-base-4.3.2-1 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c MCSMap.cpp -o MCSMap.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=/usr/src/r-base-4.3.2-1 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c MCSRingDetector.cpp -o MCSRingDetector.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=/usr/src/r-base-4.3.2-1 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c fmcs_R_wrap.cpp -o fmcs_R_wrap.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fdebug-prefix-map=/build/r-base-yAXEf4/r-base-4.3.2=/usr/src/r-base-4.3.2-1 -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c util.cpp -o util.o g++ -std=gnu++17 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o fmcsR.so MCS.o MCSCompound.o MCSMap.o MCSRingDetector.o fmcs_R_wrap.o util.o -L/usr/lib/R/lib -lR make[1]: Leaving directory '/<>/src' make[1]: Entering directory '/<>/src' make[1]: Leaving directory '/<>/src' installing to /<>/debian/r-bioc-fmcsr/usr/lib/R/site-library/00LOCK-r-bioc-fmcsr-1.44.0+dfsg/00new/fmcsR/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fmcsR) Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 305. Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 307. Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 308. Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 311. W: Ignoring specified R dependency: R (>= 2.10.0) I: Using r-bioc-chemminer for Depends:ChemmineR I: Using r-bioc-biocstyle for Suggests:BiocStyle I: Using r-cran-knitr for Suggests:knitr W: Cannot find a debian package for Suggests:knitcitations W: Cannot find a debian package for Suggests:knitrBootstrap I: Using r-cran-rmarkdown for Suggests:rmarkdown I: Using r-cran-runit for Imports:RUnit I: Using r-bioc-chemminer for Imports:ChemmineR I: Using r-bioc-biocgenerics for Imports:BiocGenerics I: BioConductor API version: r-api-bioc-3.18 I: Use r-bioc-fmcsr as Debian binary package for variables substitution dh_installdocs -a -O--buildsystem=R dh_installchangelogs -a -O--buildsystem=R dh_installsystemduser -a -O--buildsystem=R dh_perl -a -O--buildsystem=R dh_link -a -O--buildsystem=R dh_strip_nondeterminism -a -O--buildsystem=R dh_compress -a -O--buildsystem=R dh_fixperms -a -O--buildsystem=R dh_missing -a -O--buildsystem=R dh_dwz -a -O--buildsystem=R dh_strip -a -O--buildsystem=R e123c319b94a3d57aad1e775f680ee64cb14d7f7 dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -a -O--buildsystem=R dh_gencontrol -a -O--buildsystem=R dh_md5sums -a -O--buildsystem=R dh_builddeb -a -O--buildsystem=R INFO: pkgstriptranslations version 154 INFO: pkgstriptranslations version 154 pkgstriptranslations: processing r-bioc-fmcsr (in debian/r-bioc-fmcsr); do_strip: , oemstrip: pkgstriptranslations: processing r-bioc-fmcsr-dbgsym (in debian/.debhelper/r-bioc-fmcsr/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/r-bioc-fmcsr/DEBIAN/control, package r-bioc-fmcsr, directory debian/r-bioc-fmcsr pkgstripfiles: processing control file: debian/.debhelper/r-bioc-fmcsr/dbgsym-root/DEBIAN/control, package r-bioc-fmcsr-dbgsym, directory debian/.debhelper/r-bioc-fmcsr/dbgsym-root pkgstripfiles: Truncating usr/share/doc/r-bioc-fmcsr/changelog.Debian.gz to topmost ten records dpkg-deb: building package 'r-bioc-fmcsr-dbgsym' in 'debian/.debhelper/scratch-space/build-r-bioc-fmcsr/r-bioc-fmcsr-dbgsym_1.44.0+dfsg-1_armhf.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package r-bioc-fmcsr ... pkgstripfiles: No PNG files. dpkg-deb: building package 'r-bioc-fmcsr' in '../r-bioc-fmcsr_1.44.0+dfsg-1_armhf.deb'. Renaming r-bioc-fmcsr-dbgsym_1.44.0+dfsg-1_armhf.deb to r-bioc-fmcsr-dbgsym_1.44.0+dfsg-1_armhf.ddeb dpkg-genbuildinfo --build=any -O../r-bioc-fmcsr_1.44.0+dfsg-1_armhf.buildinfo dpkg-genchanges --build=any -mLaunchpad Build Daemon -O../r-bioc-fmcsr_1.44.0+dfsg-1_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-11-30T11:13:35Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ r-bioc-fmcsr_1.44.0+dfsg-1_armhf.changes: ----------------------------------------- Format: 1.8 Date: Thu, 30 Nov 2023 08:10:16 +0100 Source: r-bioc-fmcsr Binary: r-bioc-fmcsr Built-For-Profiles: noudeb Architecture: armhf Version: 1.44.0+dfsg-1 Distribution: noble-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: r-bioc-fmcsr - GNU R mismatch tolerant maximum common substructure searching Changes: r-bioc-fmcsr (1.44.0+dfsg-1) unstable; urgency=medium . * New upstream version Checksums-Sha1: 2163f4695f289e3e5f716e7df3bad740b2447754 148050 r-bioc-fmcsr-dbgsym_1.44.0+dfsg-1_armhf.ddeb 16f49f76fbc831cf280d209785ba2f3c4e96cb0c 14188 r-bioc-fmcsr_1.44.0+dfsg-1_armhf.buildinfo db2c70a6a13f3a4563eb2f0a64765beae3cd9cd3 230176 r-bioc-fmcsr_1.44.0+dfsg-1_armhf.deb Checksums-Sha256: 8d686834237f8835932042a1fc143446a2ea3b840ea71fc743d85888727973d1 148050 r-bioc-fmcsr-dbgsym_1.44.0+dfsg-1_armhf.ddeb 864595bab5ad7674a2d0fcd04102896e8dd4d982fbe7d9bfe56ef15601ee4185 14188 r-bioc-fmcsr_1.44.0+dfsg-1_armhf.buildinfo 2c58f91c5f2d51af5b4f8533c7da5c45c19e42011bf41acd849bef0f29755572 230176 r-bioc-fmcsr_1.44.0+dfsg-1_armhf.deb Files: 1fd79c2a8783b645175284a0aa2df427 148050 debug optional r-bioc-fmcsr-dbgsym_1.44.0+dfsg-1_armhf.ddeb f430fda63e957484a74489fc73229e75 14188 gnu-r optional r-bioc-fmcsr_1.44.0+dfsg-1_armhf.buildinfo 9824d8fd1be0bcd783b764510fd273cf 230176 gnu-r optional r-bioc-fmcsr_1.44.0+dfsg-1_armhf.deb /<>/r-bioc-fmcsr_1.44.0+dfsg-1_armhf.changes.new could not be renamed to /<>/r-bioc-fmcsr_1.44.0+dfsg-1_armhf.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: r-bioc-fmcsr Binary: r-bioc-fmcsr r-bioc-fmcsr-dbgsym Architecture: armhf Version: 1.44.0+dfsg-1 Checksums-Md5: 1fd79c2a8783b645175284a0aa2df427 148050 r-bioc-fmcsr-dbgsym_1.44.0+dfsg-1_armhf.ddeb 9824d8fd1be0bcd783b764510fd273cf 230176 r-bioc-fmcsr_1.44.0+dfsg-1_armhf.deb Checksums-Sha1: 2163f4695f289e3e5f716e7df3bad740b2447754 148050 r-bioc-fmcsr-dbgsym_1.44.0+dfsg-1_armhf.ddeb db2c70a6a13f3a4563eb2f0a64765beae3cd9cd3 230176 r-bioc-fmcsr_1.44.0+dfsg-1_armhf.deb Checksums-Sha256: 8d686834237f8835932042a1fc143446a2ea3b840ea71fc743d85888727973d1 148050 r-bioc-fmcsr-dbgsym_1.44.0+dfsg-1_armhf.ddeb 2c58f91c5f2d51af5b4f8533c7da5c45c19e42011bf41acd849bef0f29755572 230176 r-bioc-fmcsr_1.44.0+dfsg-1_armhf.deb Build-Origin: Ubuntu Build-Architecture: armhf Build-Date: Thu, 30 Nov 2023 11:13:35 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-13build1), autotools-dev (= 20220109.1), base-files (= 13ubuntu5), base-passwd (= 3.6.3), bash (= 5.2.21-2ubuntu1), binutils (= 2.41-7ubuntu1), binutils-arm-linux-gnueabihf (= 2.41-7ubuntu1), binutils-common (= 2.41-7ubuntu1), bsdextrautils (= 2.39.2-6ubuntu1), bsdutils (= 1:2.39.2-6ubuntu1), build-essential (= 12.10ubuntu1), bzip2 (= 1.0.8-5build1), ca-certificates (= 20230311ubuntu1), coreutils (= 9.1-1ubuntu2), cpp (= 4:13.2.0-2ubuntu1), cpp-13 (= 13.2.0-7ubuntu1), dash (= 0.5.12-6ubuntu1), dctrl-tools (= 2.24-3build2), debconf (= 1.5.82), debhelper (= 13.11.8ubuntu1), debianutils (= 5.14), debugedit (= 1:5.0-5), dh-autoreconf (= 20), dh-r (= 20230707ubuntu1), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), dpkg (= 1.22.1ubuntu3), dpkg-dev (= 1.22.1ubuntu3), dwz (= 0.15-1), file (= 1:5.45-2), findutils (= 4.9.0-5), fontconfig (= 2.14.2-4ubuntu1), fontconfig-config (= 2.14.2-4ubuntu1), fonts-font-awesome (= 5.0.10+really4.7.0~dfsg-4.1), fonts-glyphicons-halflings (= 1.009~3.4.1+dfsg-3), fonts-mathjax (= 2.7.9+dfsg-1), fonts-noto-core (= 20201225-2), fonts-noto-mono (= 20201225-2), g++ (= 4:13.2.0-2ubuntu1), g++-13 (= 13.2.0-7ubuntu1), gcc (= 4:13.2.0-2ubuntu1), gcc-13 (= 13.2.0-7ubuntu1), gcc-13-base (= 13.2.0-7ubuntu1), gettext (= 0.21-13build1), gettext-base (= 0.21-13build1), gfortran (= 4:13.2.0-2ubuntu1), gfortran-13 (= 13.2.0-7ubuntu1), grep (= 3.11-3), groff-base (= 1.23.0-3), gzip (= 1.12-1ubuntu1), hostname (= 3.23+nmu1ubuntu1), icu-devtools (= 72.1-3ubuntu3), init-system-helpers (= 1.65.2ubuntu1), intltool-debian (= 0.35.0+20060710.6), javascript-common (= 11+nmu1), libacl1 (= 2.3.1-3), libalgorithm-c3-perl (= 0.11-2), libarchive-zip-perl (= 1.68-1), libasan8 (= 13.2.0-7ubuntu1), libatomic1 (= 13.2.0-7ubuntu1), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.1.1-1build1), libaudit1 (= 1:3.1.1-1build1), libb-hooks-endofscope-perl (= 0.26-1), libb-hooks-op-check-perl (= 0.22-2build1), libbinutils (= 2.41-7ubuntu1), libblas-dev (= 3.11.0-2build1), libblas3 (= 3.11.0-2build1), libblkid1 (= 2.39.2-6ubuntu1), libboost1.81-dev (= 1.81.0-7build1), libbrotli1 (= 1.1.0-2), libbsd0 (= 0.11.7-4), libbz2-1.0 (= 1.0.8-5build1), libbz2-dev (= 1.0.8-5build1), libc-bin (= 2.38-3ubuntu1), libc-dev-bin (= 2.38-3ubuntu1), libc6 (= 2.38-3ubuntu1), libc6-dev (= 2.38-3ubuntu1), libcairo-gobject2 (= 1.18.0-1), libcairo2 (= 1.18.0-1), libcap-ng0 (= 0.8.3-1build3), libcap2 (= 1:2.66-4ubuntu1), libcc1-0 (= 13.2.0-7ubuntu1), libclass-c3-perl (= 0.35-2), libclass-load-perl (= 0.25-2), libclass-load-xs-perl (= 0.10-2build1), libclone-perl (= 0.46-1), libcom-err2 (= 1.47.0-2ubuntu1), libcrypt-dev (= 1:4.4.36-2), libcrypt1 (= 1:4.4.36-2), libctf-nobfd0 (= 2.41-7ubuntu1), libctf0 (= 2.41-7ubuntu1), libcurl3-gnutls (= 8.4.0-2ubuntu1), libcurl4 (= 8.4.0-2ubuntu1), libdata-optlist-perl (= 0.114-1), libdatrie1 (= 0.2.13-2), libdb5.3 (= 5.3.28+dfsg2-4), libdebconfclient0 (= 0.270ubuntu1), libdebhelper-perl (= 13.11.8ubuntu1), libdeflate0 (= 1.18-1), libdevel-callchecker-perl (= 0.008-2), libdevel-globaldestruction-perl (= 0.14-4), libdevel-overloadinfo-perl (= 0.007-1), libdevel-stacktrace-perl (= 2.0400-2), libdist-checkconflicts-perl (= 0.11-2), libdpkg-perl (= 1.22.1ubuntu3), libdw1 (= 0.190-1), libdynaloader-functions-perl (= 0.003-3), libelf1 (= 0.190-1), libencode-locale-perl (= 1.05-3), libeval-closure-perl (= 0.14-3), libexpat1 (= 2.5.0-2), libffi8 (= 3.4.4-2), libfile-stripnondeterminism-perl (= 1.13.1-1), libfile-which-perl (= 1.27-2), libfontconfig1 (= 2.14.2-4ubuntu1), libfreetype6 (= 2.13.2+dfsg-1), libfribidi0 (= 1.0.13-3), libgcc-13-dev (= 13.2.0-7ubuntu1), libgcc-s1 (= 13.2.0-7ubuntu1), libgcrypt20 (= 1.10.2-3ubuntu1), libgdbm-compat4 (= 1.23-5), libgdbm6 (= 1.23-5), libgdk-pixbuf-2.0-0 (= 2.42.10+dfsg-3), libgdk-pixbuf2.0-common (= 2.42.10+dfsg-3), libgfortran-13-dev (= 13.2.0-7ubuntu1), libgfortran5 (= 13.2.0-7ubuntu1), libglib2.0-0 (= 2.78.1-4), libgmp10 (= 2:6.3.0+dfsg-2ubuntu4), libgnutls30 (= 3.8.1-4ubuntu6), libgomp1 (= 13.2.0-7ubuntu1), libgpg-error0 (= 1.47-3), libgraphite2-3 (= 1.3.14-1build2), libgssapi-krb5-2 (= 1.20.1-5build1), libharfbuzz0b (= 8.0.1-1), libhogweed6 (= 3.9.1-2), libhttp-date-perl (= 6.06-1), libhttp-message-perl (= 6.44-2ubuntu1), libice6 (= 2:1.0.10-1build2), libicu-dev (= 72.1-3ubuntu3), libicu72 (= 72.1-3ubuntu3), libidn2-0 (= 2.3.4-1build1), libio-html-perl (= 1.004-3), libisl23 (= 0.26-3), libjansson4 (= 2.14-2), libjbig0 (= 2.1-6.1ubuntu1), libjpeg-dev (= 8c-2ubuntu11), libjpeg-turbo8 (= 2.1.5-2ubuntu1), libjpeg-turbo8-dev (= 2.1.5-2ubuntu1), libjpeg8 (= 8c-2ubuntu11), libjpeg8-dev (= 8c-2ubuntu11), libjs-bootstrap (= 3.4.1+dfsg-3), libjs-bootstrap4 (= 4.6.1+dfsg1-4), libjs-d3 (= 3.5.17-4), libjs-es5-shim (= 4.6.7-2), libjs-highlight.js (= 9.18.5+dfsg1-2), libjs-jquery (= 3.6.1+dfsg+~3.5.14-1), libjs-jquery-datatables (= 1.11.5+dfsg-2), libjs-jquery-datatables-extensions (= 0.0+git20150910.28fd64e+dfsg-5), libjs-jquery-selectize.js (= 0.12.6+dfsg-1.1), libjs-jquery-ui (= 1.13.2+dfsg-1), libjs-json (= 0~20221030+~1.0.8-1), libjs-mathjax (= 2.7.9+dfsg-1), libjs-microplugin.js (= 0.0.3+dfsg-1.1), libjs-modernizr (= 2.6.2+ds1-5), libjs-popper.js (= 1.16.1+ds-6), libjs-prettify (= 2015.12.04+dfsg-1.1), libjs-sifter.js (= 0.6.0+dfsg-3), libjs-twitter-bootstrap-datepicker (= 1.3.1+dfsg1-4.1), libk5crypto3 (= 1.20.1-5build1), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-5build1), libkrb5support0 (= 1.20.1-5build1), liblapack-dev (= 3.11.0-2build1), liblapack3 (= 3.11.0-2build1), libldap2 (= 2.6.6+dfsg-1~exp1ubuntu1), liblerc4 (= 4.0.0+ds-2ubuntu2), liblua5.3-0 (= 5.3.6-2), liblwp-mediatypes-perl (= 6.04-2), liblz4-1 (= 1.9.4-1), liblzma-dev (= 5.4.5-0.1), liblzma5 (= 5.4.5-0.1), libmagic-mgc (= 1:5.45-2), libmagic1 (= 1:5.45-2), libmd0 (= 1.1.0-1), libmodule-implementation-perl (= 0.09-2), libmodule-runtime-conflicts-perl (= 0.003-2), libmodule-runtime-perl (= 0.016-2), libmoose-perl (= 2.2206-1), libmount1 (= 2.39.2-6ubuntu1), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.1-1), libmro-compat-perl (= 0.15-2), libnamespace-clean-perl (= 0.27-2), libncurses-dev (= 6.4+20231121-1build1), libncurses6 (= 6.4+20231121-1build1), libncursesw6 (= 6.4+20231121-1build1), libnettle8 (= 3.9.1-2), libnghttp2-14 (= 1.58.0-1), libnsl-dev (= 1.3.0-3), libnsl2 (= 1.3.0-3), libp11-kit0 (= 0.25.0-4ubuntu1), libpackage-deprecationmanager-perl (= 0.18-1), libpackage-stash-perl (= 0.40-1), libpackage-stash-xs-perl (= 0.30-1build1), libpam-modules (= 1.5.2-9.1ubuntu1), libpam-modules-bin (= 1.5.2-9.1ubuntu1), libpam-runtime (= 1.5.2-9.1ubuntu1), libpam0g (= 1.5.2-9.1ubuntu1), libpango-1.0-0 (= 1.51.0+ds-3), libpangocairo-1.0-0 (= 1.51.0+ds-3), libpangoft2-1.0-0 (= 1.51.0+ds-3), libpaper-utils (= 1.1.29), libpaper1 (= 1.1.29), libparams-classify-perl (= 0.015-2build2), libparams-util-perl (= 1.102-2), libpcre2-16-0 (= 10.42-4), libpcre2-32-0 (= 10.42-4), libpcre2-8-0 (= 10.42-4), libpcre2-dev (= 10.42-4), libpcre2-posix3 (= 10.42-4), libperl5.36 (= 5.36.0-10ubuntu1), libpipeline1 (= 1.5.7-1), libpixman-1-0 (= 0.42.2-1), libpkgconf3 (= 1.8.1-2), libpng-dev (= 1.6.40-2), libpng16-16 (= 1.6.40-2), libpsl5 (= 0.21.2-1build1), libreadline-dev (= 8.2-3), libreadline8 (= 8.2-3), librsvg2-2 (= 2.54.7+dfsg-2), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build4), libsasl2-2 (= 2.1.28+dfsg1-4), libsasl2-modules-db (= 2.1.28+dfsg1-4), libseccomp2 (= 2.5.4-2ubuntu1), libselinux1 (= 3.5-1build2), libsframe1 (= 2.41-7ubuntu1), libsharpyuv0 (= 1.3.2-0.3), libsm6 (= 2:1.2.3-1build2), libsmartcols1 (= 2.39.2-6ubuntu1), libssh-4 (= 0.10.5-3ubuntu1), libssl3 (= 3.0.10-1ubuntu3), libstdc++-13-dev (= 13.2.0-7ubuntu1), libstdc++6 (= 13.2.0-7ubuntu1), libsub-exporter-perl (= 0.990-1), libsub-exporter-progressive-perl (= 0.001013-3), libsub-identify-perl (= 0.14-3), libsub-install-perl (= 0.929-1), libsub-name-perl (= 0.27-1), libsub-override-perl (= 0.09-4), libswitch-perl (= 2.17-3), libsystemd0 (= 253.5-1ubuntu7), libtasn1-6 (= 4.19.0-3), libtcl8.6 (= 8.6.13+dfsg-2), libthai-data (= 0.1.29-1build1), libthai0 (= 0.1.29-1build1), libtiff6 (= 4.5.1+git230720-1ubuntu1), libtimedate-perl (= 2.3300-2), libtinfo6 (= 6.4+20231121-1build1), libtirpc-common (= 1.3.4+ds-1), libtirpc-dev (= 1.3.4+ds-1), libtirpc3 (= 1.3.4+ds-1), libtk8.6 (= 8.6.13-2), libtool (= 2.4.7-7), libtry-tiny-perl (= 0.31-2), libubsan1 (= 13.2.0-7ubuntu1), libuchardet0 (= 0.0.8-1), libudev1 (= 253.5-1ubuntu7), libunistring5 (= 1.1-2), liburi-perl (= 5.21-1), libuuid1 (= 2.39.2-6ubuntu1), libuv1 (= 1.46.0-2), libvariable-magic-perl (= 0.63-1), libwebp7 (= 1.3.2-0.3), libwww-curl-perl (= 4.17-10), libwww-curl-simple-perl (= 0.100191-3), libx11-6 (= 2:1.8.7-1), libx11-data (= 2:1.8.7-1), libxau6 (= 1:1.0.9-1build5), libxcb-render0 (= 1.15-1), libxcb-shm0 (= 1.15-1), libxcb1 (= 1.15-1), libxdmcp6 (= 1:1.1.3-0ubuntu5), libxext6 (= 2:1.3.4-1build1), libxft2 (= 2.3.6-1), libxml2 (= 2.9.14+dfsg-1.3build2), libxmuu1 (= 2:1.1.3-3), libxrender1 (= 1:0.9.10-1.1), libxss1 (= 1:1.2.3-1build2), libxt6 (= 1:1.2.1-1.1), libyaml-0-2 (= 0.2.5-1), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.6.0-13.13), login (= 1:4.13+dfsg1-1ubuntu1), lto-disabled-list (= 44), m4 (= 1.4.19-4), make (= 4.3-4.1build1), man-db (= 2.12.0-1), mawk (= 1.3.4.20231102-1), ncurses-base (= 6.4+20231121-1build1), ncurses-bin (= 6.4+20231121-1build1), node-bootstrap-sass (= 3.4.3-2), node-html5shiv (= 3.7.3+dfsg-5), node-normalize.css (= 8.0.1-5), openssl (= 3.0.10-1ubuntu3), pandoc (= 2.17.1.1-3ubuntu1), pandoc-data (= 2.17.1.1-3ubuntu1), patch (= 2.7.6-7build2), perl (= 5.36.0-10ubuntu1), perl-base (= 5.36.0-10ubuntu1), perl-modules-5.36 (= 5.36.0-10ubuntu1), pkg-config (= 1.8.1-2), pkgconf (= 1.8.1-2), pkgconf-bin (= 1.8.1-2), po-debconf (= 1.0.21+nmu1), r-base-core (= 4.3.2-1), r-base-dev (= 4.3.2-1), r-bioc-biocgenerics (= 0.48.1-1), r-bioc-chemminer (= 3.54.0+dfsg-1), r-cran-base64enc (= 0.1-3-3), r-cran-bh (= 1.81.0-1), r-cran-bitops (= 1.0-7-1), r-cran-bslib (= 0.6.0+dfsg-1), r-cran-cachem (= 1.0.8-1), r-cran-cli (= 3.6.1-1), r-cran-colorspace (= 2.1-0+dfsg-1), r-cran-commonmark (= 1.9.0-1), r-cran-crayon (= 1.5.2-1), r-cran-crosstalk (= 1.2.1+dfsg-1), r-cran-dbi (= 1.1.3-1), r-cran-digest (= 0.6.33-1), r-cran-dt (= 0.30+dfsg-2), r-cran-ellipsis (= 0.3.2-2), r-cran-evaluate (= 0.23-1), r-cran-fansi (= 1.0.5-1), r-cran-farver (= 2.1.1-1), r-cran-fastmap (= 1.1.1-1), r-cran-fontawesome (= 0.5.2-1), r-cran-fs (= 1.6.3+dfsg-1), r-cran-ggplot2 (= 3.4.4+dfsg-1), r-cran-glue (= 1.6.2-1), r-cran-gridextra (= 2.3-3build1), r-cran-gtable (= 0.3.4+dfsg-1), r-cran-highr (= 0.10+dfsg-1), r-cran-htmltools (= 0.5.7-1), r-cran-htmlwidgets (= 1.6.3+dfsg-1), r-cran-httpuv (= 1.6.12+dfsg-1), r-cran-isoband (= 0.2.7-1), r-cran-jquerylib (= 0.1.4+dfsg-4), r-cran-jsonlite (= 1.8.7+dfsg-1), r-cran-knitr (= 1.45+dfsg-1), r-cran-labeling (= 0.4.3-1), r-cran-later (= 1.3.1+dfsg-1), r-cran-lattice (= 0.22-5-1), r-cran-lazyeval (= 0.2.2-1build1), r-cran-lifecycle (= 1.0.4+dfsg-1), r-cran-littler (= 0.3.18-2), r-cran-magrittr (= 2.0.3-1), r-cran-mass (= 7.3-60-2), r-cran-matrix (= 1.6-3-1), r-cran-memoise (= 2.0.1-1), r-cran-mgcv (= 1.9-0-1), r-cran-mime (= 0.12-1), r-cran-munsell (= 0.5.0-2build1), r-cran-nlme (= 3.1.163-1), r-cran-pillar (= 1.9.0+dfsg-1), r-cran-pkgconfig (= 2.0.3-2build1), r-cran-pkgkitten (= 0.2.3-1), r-cran-png (= 0.1-8-1), r-cran-promises (= 1.2.1+dfsg-1), r-cran-r6 (= 2.5.1-1), r-cran-rappdirs (= 0.3.3-1), r-cran-rcolorbrewer (= 1.1-3-1build1), r-cran-rcpp (= 1.0.11-1), r-cran-rcurl (= 1.98-1.13+dfsg-1), r-cran-rjson (= 0.2.21-1), r-cran-rlang (= 1.1.2-1), r-cran-rmarkdown (= 2.25+dfsg-1), r-cran-rsvg (= 2.6.0-1), r-cran-runit (= 0.4.32-3), r-cran-sass (= 0.4.7+dfsg-1), r-cran-scales (= 1.2.1-1), r-cran-shiny (= 1.8.0+dfsg-1), r-cran-sourcetools (= 0.1.7-1-1), r-cran-stringi (= 1.8.2-1), r-cran-stringr (= 1.5.1-1), r-cran-tibble (= 3.2.1+dfsg-2), r-cran-tinytex (= 0.49-1), r-cran-utf8 (= 1.2.4-1), r-cran-vctrs (= 0.6.4-1), r-cran-viridislite (= 0.4.2-2), r-cran-withr (= 2.5.0-1), r-cran-xfun (= 0.41+dfsg-1), r-cran-xtable (= 1:1.8-4-2), r-cran-yaml (= 2.3.7-1), readline-common (= 8.2-3), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.9-1), sensible-utils (= 0.0.20), shared-mime-info (= 2.4-1), sysvinit-utils (= 3.08-3ubuntu1), tar (= 1.34+dfsg-1.2ubuntu1), tzdata (= 2023c-9ubuntu1), ucf (= 3.0043+nmu1), unzip (= 6.0-28ubuntu1), util-linux (= 2.39.2-6ubuntu1), x11-common (= 1:7.7+23ubuntu2), xauth (= 1:1.1.2-1), xdg-utils (= 1.1.3-4.1ubuntu3), xz-utils (= 5.4.5-0.1), zip (= 3.0-13), zlib1g (= 1:1.3.dfsg-3ubuntu1), zlib1g-dev (= 1:1.3.dfsg-3ubuntu1) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1701328216" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ r-bioc-fmcsr_1.44.0+dfsg-1_armhf.deb ------------------------------------ new Debian package, version 2.0. size 230176 bytes: control archive=1792 bytes. 1243 bytes, 23 lines control 2382 bytes, 31 lines md5sums Package: r-bioc-fmcsr Version: 1.44.0+dfsg-1 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian R Packages Maintainers Installed-Size: 364 Depends: r-api-4.0, r-api-bioc-3.18, r-bioc-chemminer, r-cran-runit, r-bioc-biocgenerics, libc6 (>= 2.38), libgcc-s1 (>= 3.5), libstdc++6 (>= 13.1) Suggests: r-bioc-biocstyle, r-cran-knitr, r-cran-rmarkdown Section: gnu-r Priority: optional Homepage: https://bioconductor.org/packages/fmcsR/ Description: GNU R mismatch tolerant maximum common substructure searching The fmcsR package introduces an efficient maximum common substructure (MCS) algorithms combined with a novel matching strategy that allows for atom and/or bond mismatches in the substructures shared among two small molecules. The resulting flexible MCSs (FMCSs) are often larger than strict MCSs, resulting in the identification of more common features in their source structures, as well as a higher sensitivity in finding compounds with weak structural similarities. The fmcsR package provides several utilities to use the FMCS algorithm for pairwise compound comparisons, structure similarity searching and clustering. drwxr-xr-x root/root 0 2023-11-30 07:10 ./ drwxr-xr-x root/root 0 2023-11-30 07:10 ./usr/ drwxr-xr-x root/root 0 2023-11-30 07:10 ./usr/lib/ drwxr-xr-x root/root 0 2023-11-30 07:10 ./usr/lib/R/ drwxr-xr-x root/root 0 2023-11-30 07:10 ./usr/lib/R/site-library/ drwxr-xr-x root/root 0 2023-11-30 07:10 ./usr/lib/R/site-library/fmcsR/ -rw-r--r-- root/root 86 2023-11-30 07:10 ./usr/lib/R/site-library/fmcsR/CITATION -rw-r--r-- root/root 1763 2023-11-30 07:10 ./usr/lib/R/site-library/fmcsR/DESCRIPTION -rw-r--r-- root/root 324 2023-11-30 07:10 ./usr/lib/R/site-library/fmcsR/INDEX drwxr-xr-x root/root 0 2023-11-30 07:10 ./usr/lib/R/site-library/fmcsR/Meta/ -rw-r--r-- root/root 540 2023-11-30 07:10 ./usr/lib/R/site-library/fmcsR/Meta/Rd.rds -rw-r--r-- root/root 121 2023-11-30 07:10 ./usr/lib/R/site-library/fmcsR/Meta/data.rds -rw-r--r-- root/root 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./usr/share/doc/r-bioc-fmcsr/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: 2308 Build-Time: 23 Distribution: noble-proposed Host Architecture: armhf Install-Time: 39 Job: r-bioc-fmcsr_1.44.0+dfsg-1.dsc Machine Architecture: arm64 Package: r-bioc-fmcsr Package-Time: 64 Source-Version: 1.44.0+dfsg-1 Space: 2308 Status: successful Version: 1.44.0+dfsg-1 -------------------------------------------------------------------------------- Finished at 2023-11-30T11:13:35Z Build needed 00:01:04, 2308k disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27033351 Scanning for processes to kill in build PACKAGEBUILD-27033351