RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux allspice 3.2.0-37-generic #58-Ubuntu SMP Thu Jan 24 15:28:10 UTC 2013 x86_64 Buildd toolchain package versions: launchpad-buildd_119~0.IS.08.04 python-lpbuildd_119~0.IS.08.04 bzr_2.5.1-0ubuntu2. Syncing the system clock with the buildd NTP service... 16 Jan 17:19:22 ntpdate[24058]: adjust time server 10.211.37.1 offset -0.000042 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-5469622', '/home/buildd/filecache-default/85437d411726979c3d865ddb70b8896a411f3906'] Unpacking chroot for build PACKAGEBUILD-5469622 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-5469622'] Mounting chroot for build PACKAGEBUILD-5469622 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-5469622', 'deb http://ftpmaster.internal/ubuntu trusty main universe', 'deb http://ftpmaster.internal/ubuntu trusty-security main universe', 'deb http://ftpmaster.internal/ubuntu trusty-updates main universe', 'deb http://ftpmaster.internal/ubuntu trusty-proposed main universe'] Overriding sources.list in build-PACKAGEBUILD-5469622 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-5469622', 'i386'] Updating debian chroot for build PACKAGEBUILD-5469622 Ign http://archive-team.internal trusty InRelease Ign http://archive-team.internal trusty Release.gpg Get:1 http://archive-team.internal trusty Release [732 B] Ign http://ftpmaster.internal trusty InRelease Ign http://ftpmaster.internal trusty-security InRelease Ign http://ftpmaster.internal trusty-updates InRelease Get:2 http://archive-team.internal trusty/main i386 Packages [1172 B] Ign http://ftpmaster.internal trusty-proposed InRelease Get:3 http://ftpmaster.internal trusty Release.gpg [933 B] Ign http://archive-team.internal trusty/main Translation-en Get:4 http://ftpmaster.internal trusty-security Release.gpg [933 B] Get:5 http://ftpmaster.internal trusty-updates Release.gpg [933 B] Get:6 http://ftpmaster.internal trusty-proposed Release.gpg [933 B] Get:7 http://ftpmaster.internal trusty Release [58.5 kB] Get:8 http://ftpmaster.internal trusty-security Release [58.5 kB] Get:9 http://ftpmaster.internal trusty-updates Release [58.5 kB] Get:10 http://ftpmaster.internal trusty-proposed Release [58.5 kB] Get:11 http://ftpmaster.internal trusty/main i386 Packages [1285 kB] Get:12 http://ftpmaster.internal trusty/universe i386 Packages [5864 kB] Get:13 http://ftpmaster.internal trusty/main Translation-en [740 kB] Get:14 http://ftpmaster.internal trusty/universe Translation-en [4035 kB] Get:15 http://ftpmaster.internal trusty-security/main i386 Packages [14 B] Get:16 http://ftpmaster.internal trusty-security/universe i386 Packages [14 B] Get:17 http://ftpmaster.internal trusty-security/main Translation-en [14 B] Get:18 http://ftpmaster.internal trusty-security/universe Translation-en [14 B] Get:19 http://ftpmaster.internal trusty-updates/main i386 Packages [14 B] Get:20 http://ftpmaster.internal trusty-updates/universe i386 Packages [14 B] Get:21 http://ftpmaster.internal trusty-updates/main Translation-en [14 B] Get:22 http://ftpmaster.internal trusty-updates/universe Translation-en [14 B] Get:23 http://ftpmaster.internal trusty-proposed/main i386 Packages [33.0 kB] Get:24 http://ftpmaster.internal trusty-proposed/universe i386 Packages [157 kB] Get:25 http://ftpmaster.internal trusty-proposed/main Translation-en [17.0 kB] Get:26 http://ftpmaster.internal trusty-proposed/universe Translation-en [102 kB] Fetched 12.5 MB in 6s (1880 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libprocps1 Use 'apt-get autoremove' to remove it. The following NEW packages will be installed: libdebconfclient0 libprocps3 The following packages will be upgraded: apt apt-transport-https base-files base-passwd bsdutils cpp cpp-4.8 e2fslibs e2fsprogs findutils g++ g++-4.8 gcc gcc-4.8 gcc-4.8-base gzip ifupdown libapt-pkg4.12 libasan0 libatomic1 libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcomerr2 libffi6 libgcc-4.8-dev libgcc1 libgmp10 libgomp1 libitm1 libmount1 libncurses5 libncursesw5 libpam-modules libpam-modules-bin libpam-runtime libpam0g libquadmath0 libsqlite3-0 libss2 libstdc++-4.8-dev libstdc++6 libtinfo5 libudev1 libuuid1 linux-libc-dev login mount multiarch-support ncurses-base ncurses-bin passwd perl perl-base perl-modules pkgbinarymangler procps udev util-linux 61 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 41.1 MB of archives. After this operation, 498 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main base-files i386 7.2ubuntu1 [45.1 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main libc-bin i386 2.18-0ubuntu6 [1100 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main libc6-dev i386 2.18-0ubuntu6 [2552 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libc-dev-bin i386 2.18-0ubuntu6 [63.4 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main linux-libc-dev i386 3.13.0-3.18 [736 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main libitm1 i386 4.8.2-14ubuntu1 [28.4 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main libgomp1 i386 4.8.2-14ubuntu1 [25.0 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main libasan0 i386 4.8.2-14ubuntu1 [64.1 kB] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main gcc-4.8-base i386 4.8.2-14ubuntu1 [15.0 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main libgcc1 i386 1:4.8.2-14ubuntu1 [46.5 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main libatomic1 i386 4.8.2-14ubuntu1 [8238 B] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main libquadmath0 i386 4.8.2-14ubuntu1 [187 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main cpp-4.8 i386 4.8.2-14ubuntu1 [4293 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main libstdc++-4.8-dev i386 4.8.2-14ubuntu1 [1055 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main g++-4.8 i386 4.8.2-14ubuntu1 [6870 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main gcc-4.8 i386 4.8.2-14ubuntu1 [4813 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libgcc-4.8-dev i386 4.8.2-14ubuntu1 [1734 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main libstdc++6 i386 4.8.2-14ubuntu1 [261 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main libgmp10 i386 2:5.1.3+dfsg-1ubuntu1 [230 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main libc6 i386 2.18-0ubuntu6 [4017 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main e2fslibs i386 1.42.9-2ubuntu1 [192 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main e2fsprogs i386 1.42.9-2ubuntu1 [665 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty/main findutils i386 4.4.2-7 [237 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main gzip i386 1.6-3ubuntu1 [83.8 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty/main login i386 1:4.1.5.1-1ubuntu7 [303 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main mount i386 2.20.1-5.1ubuntu13 [112 kB] Get:27 http://ftpmaster.internal/ubuntu/ trusty/main ncurses-bin i386 5.9+20131221-1ubuntu1 [135 kB] Get:28 http://ftpmaster.internal/ubuntu/ trusty/main perl i386 5.18.2-2 [2159 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty/main perl-base i386 5.18.2-2 [1133 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/main perl-modules all 5.18.2-2 [2696 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/main util-linux i386 2.20.1-5.1ubuntu13 [450 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main libapt-pkg4.12 i386 0.9.14.1ubuntu2 [623 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main apt i386 0.9.14.1ubuntu2 [954 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty/main libdebconfclient0 i386 0.187ubuntu1 [6594 B] Get:35 http://ftpmaster.internal/ubuntu/ trusty/main base-passwd i386 3.5.31 [43.8 kB] Get:36 http://ftpmaster.internal/ubuntu/ trusty/main bsdutils i386 1:2.20.1-5.1ubuntu13 [33.7 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty/main ncurses-base all 5.9+20131221-1ubuntu1 [16.5 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main libpam0g i386 1.1.3-11ubuntu1 [55.1 kB] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main libpam-modules-bin i386 1.1.3-11ubuntu1 [30.7 kB] Get:40 http://ftpmaster.internal/ubuntu/ trusty/main libpam-modules i386 1.1.3-11ubuntu1 [226 kB] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main passwd i386 1:4.1.5.1-1ubuntu7 [747 kB] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main libuuid1 i386 2.20.1-5.1ubuntu13 [11.3 kB] Get:43 http://ftpmaster.internal/ubuntu/ trusty/main libblkid1 i386 2.20.1-5.1ubuntu13 [67.4 kB] Get:44 http://ftpmaster.internal/ubuntu/ trusty/main libcomerr2 i386 1.42.9-2ubuntu1 [62.4 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main libmount1 i386 2.20.1-5.1ubuntu13 [59.7 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty/main libncursesw5 i386 5.9+20131221-1ubuntu1 [122 kB] Get:47 http://ftpmaster.internal/ubuntu/ trusty/main libtinfo5 i386 5.9+20131221-1ubuntu1 [70.9 kB] Get:48 http://ftpmaster.internal/ubuntu/ trusty/main libncurses5 i386 5.9+20131221-1ubuntu1 [93.7 kB] Get:49 http://ftpmaster.internal/ubuntu/ trusty/main libss2 i386 1.42.9-2ubuntu1 [66.5 kB] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main libffi6 i386 3.0.13-11 [14.3 kB] Get:51 http://ftpmaster.internal/ubuntu/ trusty/main libsqlite3-0 i386 3.8.2-1ubuntu2 [344 kB] Get:52 http://ftpmaster.internal/ubuntu/ trusty/main libprocps3 i386 1:3.3.9-1ubuntu2 [30.0 kB] Get:53 http://ftpmaster.internal/ubuntu/ trusty/main procps i386 1:3.3.9-1ubuntu2 [203 kB] Get:54 http://ftpmaster.internal/ubuntu/ trusty/main udev i386 204-5ubuntu8 [736 kB] Get:55 http://ftpmaster.internal/ubuntu/ trusty/main libudev1 i386 204-5ubuntu8 [36.5 kB] Get:56 http://ftpmaster.internal/ubuntu/ trusty/main libpam-runtime all 1.1.3-11ubuntu1 [38.6 kB] Get:57 http://ftpmaster.internal/ubuntu/ trusty/main multiarch-support i386 2.18-0ubuntu6 [4486 B] Get:58 http://ftpmaster.internal/ubuntu/ trusty/main ifupdown i386 0.7.47.2ubuntu1 [51.3 kB] Get:59 http://ftpmaster.internal/ubuntu/ trusty/main apt-transport-https i386 0.9.14.1ubuntu2 [24.9 kB] Get:60 http://ftpmaster.internal/ubuntu/ trusty/main cpp i386 4:4.8.2-1ubuntu3 [27.7 kB] Get:61 http://ftpmaster.internal/ubuntu/ trusty/main gcc i386 4:4.8.2-1ubuntu3 [4990 B] Get:62 http://ftpmaster.internal/ubuntu/ trusty/main g++ i386 4:4.8.2-1ubuntu3 [1492 B] Get:63 http://ftpmaster.internal/ubuntu/ trusty/main pkgbinarymangler all 119 [28.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 41.1 MB in 6s (6329 kB/s) (Reading database ... 11989 files and directories currently installed.) Preparing to replace base-files 6.12ubuntu5 (using .../base-files_7.2ubuntu1_i386.deb) ... Unpacking replacement base-files ... Setting up base-files (7.2ubuntu1) ... Installing new version of config file /etc/debian_version ... (Reading database ... 11989 files and directories currently installed.) Preparing to replace libc-bin 2.18-0ubuntu2 (using .../libc-bin_2.18-0ubuntu6_i386.deb) ... Unpacking replacement libc-bin ... Preparing to replace libc6:i386 2.18-0ubuntu2 (using .../libc6_2.18-0ubuntu6_i386.deb) ... Unpacking replacement libc6:i386 ... Preparing to replace libgcc1:i386 1:4.8.2-10ubuntu2 (using .../libgcc1_1%3a4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement libgcc1:i386 ... Preparing to replace gcc-4.8-base:i386 4.8.2-10ubuntu2 (using .../gcc-4.8-base_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement gcc-4.8-base:i386 ... Setting up gcc-4.8-base:i386 (4.8.2-14ubuntu1) ... Setting up libgcc1:i386 (1:4.8.2-14ubuntu1) ... Setting up libc6:i386 (2.18-0ubuntu6) ... Setting up libc-bin (2.18-0ubuntu6) ... (Reading database ... 11989 files and directories currently installed.) Preparing to replace libc6-dev:i386 2.18-0ubuntu2 (using .../libc6-dev_2.18-0ubuntu6_i386.deb) ... Unpacking replacement libc6-dev:i386 ... Preparing to replace libc-dev-bin 2.18-0ubuntu2 (using .../libc-dev-bin_2.18-0ubuntu6_i386.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace linux-libc-dev:i386 3.12.0-7.15 (using .../linux-libc-dev_3.13.0-3.18_i386.deb) ... Unpacking replacement linux-libc-dev:i386 ... Preparing to replace libitm1:i386 4.8.2-10ubuntu2 (using .../libitm1_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement libitm1:i386 ... Preparing to replace libgomp1:i386 4.8.2-10ubuntu2 (using .../libgomp1_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement libgomp1:i386 ... Preparing to replace libasan0:i386 4.8.2-10ubuntu2 (using .../libasan0_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement libasan0:i386 ... Preparing to replace libatomic1:i386 4.8.2-10ubuntu2 (using .../libatomic1_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement libatomic1:i386 ... Preparing to replace libquadmath0:i386 4.8.2-10ubuntu2 (using .../libquadmath0_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement libquadmath0:i386 ... Preparing to replace cpp-4.8 4.8.2-10ubuntu2 (using .../cpp-4.8_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement cpp-4.8 ... Preparing to replace libstdc++-4.8-dev:i386 4.8.2-10ubuntu2 (using .../libstdc++-4.8-dev_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement libstdc++-4.8-dev:i386 ... Preparing to replace g++-4.8 4.8.2-10ubuntu2 (using .../g++-4.8_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement g++-4.8 ... Preparing to replace gcc-4.8 4.8.2-10ubuntu2 (using .../gcc-4.8_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement gcc-4.8 ... Preparing to replace libgcc-4.8-dev:i386 4.8.2-10ubuntu2 (using .../libgcc-4.8-dev_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement libgcc-4.8-dev:i386 ... Preparing to replace libstdc++6:i386 4.8.2-10ubuntu2 (using .../libstdc++6_4.8.2-14ubuntu1_i386.deb) ... Unpacking replacement libstdc++6:i386 ... Setting up libstdc++6:i386 (4.8.2-14ubuntu1) ... Processing triggers for libc-bin ... (Reading database ... 11994 files and directories currently installed.) Preparing to replace libgmp10:i386 2:5.1.2+dfsg-3ubuntu3 (using .../libgmp10_2%3a5.1.3+dfsg-1ubuntu1_i386.deb) ... Unpacking replacement libgmp10:i386 ... Preparing to replace e2fslibs:i386 1.42.8-1ubuntu3 (using .../e2fslibs_1.42.9-2ubuntu1_i386.deb) ... Unpacking replacement e2fslibs:i386 ... Setting up e2fslibs:i386 (1.42.9-2ubuntu1) ... Processing triggers for libc-bin ... (Reading database ... 11994 files and directories currently installed.) Preparing to replace e2fsprogs 1.42.8-1ubuntu3 (using .../e2fsprogs_1.42.9-2ubuntu1_i386.deb) ... Unpacking replacement e2fsprogs ... Setting up e2fsprogs (1.42.9-2ubuntu1) ... (Reading database ... 11997 files and directories currently installed.) Preparing to replace findutils 4.4.2-6ubuntu2 (using .../findutils_4.4.2-7_i386.deb) ... Unpacking replacement findutils ... Setting up findutils (4.4.2-7) ... (Reading database ... 11997 files and directories currently installed.) Preparing to replace gzip 1.6-2ubuntu1 (using .../gzip_1.6-3ubuntu1_i386.deb) ... Unpacking replacement gzip ... Setting up gzip (1.6-3ubuntu1) ... (Reading database ... 11997 files and directories currently installed.) Preparing to replace login 1:4.1.5.1-1ubuntu6 (using .../login_1%3a4.1.5.1-1ubuntu7_i386.deb) ... Unpacking replacement login ... Setting up login (1:4.1.5.1-1ubuntu7) ... (Reading database ... 11995 files and directories currently installed.) Preparing to replace mount 2.20.1-5.1ubuntu11 (using .../mount_2.20.1-5.1ubuntu13_i386.deb) ... Unpacking replacement mount ... Setting up mount (2.20.1-5.1ubuntu13) ... (Reading database ... 11995 files and directories currently installed.) Preparing to replace ncurses-bin 5.9+20130608-1ubuntu1 (using .../ncurses-bin_5.9+20131221-1ubuntu1_i386.deb) ... Unpacking replacement ncurses-bin ... Setting up ncurses-bin (5.9+20131221-1ubuntu1) ... (Reading database ... 11995 files and directories currently installed.) Preparing to replace perl 5.18.1-5 (using .../perl_5.18.2-2_i386.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.18.1-5 (using .../perl-base_5.18.2-2_i386.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.18.2-2) ... (Reading database ... 12000 files and directories currently installed.) Preparing to replace perl-modules 5.18.1-5 (using .../perl-modules_5.18.2-2_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace util-linux 2.20.1-5.1ubuntu11 (using .../util-linux_2.20.1-5.1ubuntu13_i386.deb) ... Unpacking replacement util-linux ... Setting up util-linux (2.20.1-5.1ubuntu13) ... (Reading database ... 11994 files and directories currently installed.) Preparing to replace libapt-pkg4.12:i386 0.9.14.1ubuntu1 (using .../libapt-pkg4.12_0.9.14.1ubuntu2_i386.deb) ... Unpacking replacement libapt-pkg4.12:i386 ... Setting up libapt-pkg4.12:i386 (0.9.14.1ubuntu2) ... Processing triggers for libc-bin ... (Reading database ... 11994 files and directories currently installed.) Preparing to replace apt 0.9.14.1ubuntu1 (using .../apt_0.9.14.1ubuntu2_i386.deb) ... Unpacking replacement apt ... Setting up apt (0.9.14.1ubuntu2) ... Selecting previously unselected package libdebconfclient0:i386. (Reading database ... 11995 files and directories currently installed.) Unpacking libdebconfclient0:i386 (from .../libdebconfclient0_0.187ubuntu1_i386.deb) ... Setting up libdebconfclient0:i386 (0.187ubuntu1) ... Processing triggers for libc-bin ... (Reading database ... 12000 files and directories currently installed.) Preparing to replace base-passwd 3.5.28 (using .../base-passwd_3.5.31_i386.deb) ... Unpacking replacement base-passwd ... Setting up base-passwd (3.5.31) ... Changing shell of daemon from /bin/sh to /usr/sbin/nologin Changing shell of bin from /bin/sh to /usr/sbin/nologin Changing shell of sys from /bin/sh to /usr/sbin/nologin Changing shell of games from /bin/sh to /usr/sbin/nologin Changing shell of man from /bin/sh to /usr/sbin/nologin Changing shell of lp from /bin/sh to /usr/sbin/nologin Changing shell of mail from /bin/sh to /usr/sbin/nologin Changing shell of news from /bin/sh to /usr/sbin/nologin Changing shell of uucp from /bin/sh to /usr/sbin/nologin Changing shell of proxy from /bin/sh to /usr/sbin/nologin Changing shell of www-data from /bin/sh to /usr/sbin/nologin Changing shell of backup from /bin/sh to /usr/sbin/nologin Changing shell of list from /bin/sh to /usr/sbin/nologin Changing shell of irc from /bin/sh to /usr/sbin/nologin Changing shell of gnats from /bin/sh to /usr/sbin/nologin Changing shell of nobody from /bin/sh to /usr/sbin/nologin 16 changes have been made, rewriting files Writing passwd-file to /etc/passwd Writing shadow-file to /etc/shadow Writing group-file to /etc/group (Reading database ... 12001 files and directories currently installed.) Preparing to replace bsdutils 1:2.20.1-5.1ubuntu11 (using .../bsdutils_1%3a2.20.1-5.1ubuntu13_i386.deb) ... Unpacking replacement bsdutils ... Setting up bsdutils (1:2.20.1-5.1ubuntu13) ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace ncurses-base 5.9+20130608-1ubuntu1 (using .../ncurses-base_5.9+20131221-1ubuntu1_all.deb) ... Unpacking replacement ncurses-base ... Setting up ncurses-base (5.9+20131221-1ubuntu1) ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace libpam0g:i386 1.1.3-10ubuntu1 (using .../libpam0g_1.1.3-11ubuntu1_i386.deb) ... Unpacking replacement libpam0g:i386 ... Setting up libpam0g:i386 (1.1.3-11ubuntu1) ... Processing triggers for libc-bin ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace libpam-modules-bin 1.1.3-10ubuntu1 (using .../libpam-modules-bin_1.1.3-11ubuntu1_i386.deb) ... Unpacking replacement libpam-modules-bin ... Setting up libpam-modules-bin (1.1.3-11ubuntu1) ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace libpam-modules:i386 1.1.3-10ubuntu1 (using .../libpam-modules_1.1.3-11ubuntu1_i386.deb) ... Unpacking replacement libpam-modules:i386 ... Setting up libpam-modules:i386 (1.1.3-11ubuntu1) ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace passwd 1:4.1.5.1-1ubuntu6 (using .../passwd_1%3a4.1.5.1-1ubuntu7_i386.deb) ... Unpacking replacement passwd ... Setting up passwd (1:4.1.5.1-1ubuntu7) ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace libuuid1:i386 2.20.1-5.1ubuntu11 (using .../libuuid1_2.20.1-5.1ubuntu13_i386.deb) ... Unpacking replacement libuuid1:i386 ... Setting up libuuid1:i386 (2.20.1-5.1ubuntu13) ... Processing triggers for libc-bin ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace libblkid1:i386 2.20.1-5.1ubuntu11 (using .../libblkid1_2.20.1-5.1ubuntu13_i386.deb) ... Unpacking replacement libblkid1:i386 ... Setting up libblkid1:i386 (2.20.1-5.1ubuntu13) ... Processing triggers for libc-bin ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace libcomerr2:i386 1.42.8-1ubuntu3 (using .../libcomerr2_1.42.9-2ubuntu1_i386.deb) ... Unpacking replacement libcomerr2:i386 ... Setting up libcomerr2:i386 (1.42.9-2ubuntu1) ... Processing triggers for libc-bin ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace libmount1:i386 2.20.1-5.1ubuntu11 (using .../libmount1_2.20.1-5.1ubuntu13_i386.deb) ... Unpacking replacement libmount1:i386 ... Setting up libmount1:i386 (2.20.1-5.1ubuntu13) ... Processing triggers for libc-bin ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace libncursesw5:i386 5.9+20130608-1ubuntu1 (using .../libncursesw5_5.9+20131221-1ubuntu1_i386.deb) ... Unpacking replacement libncursesw5:i386 ... Preparing to replace libtinfo5:i386 5.9+20130608-1ubuntu1 (using .../libtinfo5_5.9+20131221-1ubuntu1_i386.deb) ... Unpacking replacement libtinfo5:i386 ... Setting up libtinfo5:i386 (5.9+20131221-1ubuntu1) ... Processing triggers for libc-bin ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace libncurses5:i386 5.9+20130608-1ubuntu1 (using .../libncurses5_5.9+20131221-1ubuntu1_i386.deb) ... Unpacking replacement libncurses5:i386 ... Setting up libncurses5:i386 (5.9+20131221-1ubuntu1) ... Processing triggers for libc-bin ... (Reading database ... 12001 files and directories currently installed.) Preparing to replace libss2:i386 1.42.8-1ubuntu3 (using .../libss2_1.42.9-2ubuntu1_i386.deb) ... Unpacking replacement libss2:i386 ... Setting up libss2:i386 (1.42.9-2ubuntu1) ... 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Setting up gcc-4.8 (4.8.2-14ubuntu1) ... Setting up g++-4.8 (4.8.2-14ubuntu1) ... Setting up libncursesw5:i386 (5.9+20131221-1ubuntu1) ... Setting up libffi6:i386 (3.0.13-11) ... Setting up libsqlite3-0:i386 (3.8.2-1ubuntu2) ... Setting up libprocps3:i386 (1:3.3.9-1ubuntu2) ... Setting up procps (1:3.3.9-1ubuntu2) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libudev1:i386 (204-5ubuntu8) ... Setting up udev (204-5ubuntu8) ... invoke-rc.d: policy-rc.d denied execution of restart. Removing 'diversion of /bin/udevadm to /bin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up ifupdown (0.7.47.2ubuntu1) ... Setting up apt-transport-https (0.9.14.1ubuntu2) ... Setting up cpp (4:4.8.2-1ubuntu3) ... Setting up gcc (4:4.8.2-1ubuntu3) ... Setting up g++ (4:4.8.2-1ubuntu3) ... Setting up pkgbinarymangler (119) ... Setting up perl-modules (5.18.2-2) ... Setting up perl (5.18.2-2) ... Processing triggers for libc-bin ... Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-5469622', 'i386', 'trusty-proposed', '--nolog', '--batch', '--archive=ubuntu', '--dist=trusty-proposed', '-A', '--purpose=PRIMARY', '--architecture=i386', '--comp=universe', 'r-bioc-xvector_0.2.0-2.dsc'] Initiating build PACKAGEBUILD-5469622 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 3.2.0-37-generic #58-Ubuntu SMP Thu Jan 24 15:28:10 UTC 2013 i686 Automatic build of r-bioc-xvector_0.2.0-2 on allspice by sbuild/i386 1.170.5 Build started at 20140116-1719 ****************************************************************************** r-bioc-xvector_0.2.0-2.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 9), cdbs, r-base-dev, r-bioc-biocgenerics (>= 0.7.2), r-bioc-iranges (>= 1.19.36) Checking for already installed source dependencies... debhelper: missing cdbs: missing r-base-dev: missing r-bioc-biocgenerics: missing r-bioc-iranges: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper cdbs r-base-dev r-bioc-biocgenerics r-bioc-iranges Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libprocps1 Use 'apt-get autoremove' to remove it. The following extra packages will be installed: apparmor-easyprof autoconf automake autotools-dev bsdmainutils ca-certificates dh-apparmor dh-python dh-translations file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base intltool intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libencode-locale-perl libexpat1 libfile-listing-perl libfontconfig1 libfreetype6 libgfortran-4.8-dev libgfortran3 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libice6 libio-html-perl libio-socket-ssl-perl libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic1 libmpdec2 libncurses5-dev libnet-http-perl libnet-ssleay-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-dev libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libreadline-dev libreadline6-dev libsigsegv2 libsm6 libssl1.0.0 libtcl8.5 libthai-data libthai0 libtiff5 libtinfo-dev libtk8.5 libunistring0 liburi-perl libwww-perl libwww-robotrules-perl libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl libxml2 libxrender1 libxss1 libxt6 m4 man-db mime-support netbase openssl po-debconf python python-minimal python-scour python2.7 python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal r-base-core tcl8.5 tk8.5 ucf unzip x11-common xdg-utils zip zlib1g-dev Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc libtool wamerican wordlist whois vacation devscripts dh-make gettext-doc gfortran-multilib gfortran-doc gfortran-4.8-multilib gfortran-4.8-doc libgfortran3-dbg groff libdata-dump-perl libcrypt-ssleay-perl ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp libauthen-ntlm-perl less www-browser libmail-box-perl python-doc python-tk python-rsvg python-cairo python2.7-doc binfmt-support python3-doc python3-tk python3.3-doc r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo texi2html tcl-tclreadline gvfs-bin Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info libhtml-format-perl libio-socket-inet6-perl libio-socket-ip-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl xml-core libmail-sendmail-perl r-recommended r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl x11-utils x11-xserver-utils The following NEW packages will be installed: apparmor-easyprof autoconf automake autotools-dev bsdmainutils ca-certificates cdbs debhelper dh-apparmor dh-python dh-translations file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base intltool intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libencode-locale-perl libexpat1 libfile-listing-perl libfontconfig1 libfreetype6 libgfortran-4.8-dev libgfortran3 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libice6 libio-html-perl libio-socket-ssl-perl libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic1 libmpdec2 libncurses5-dev libnet-http-perl libnet-ssleay-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-dev libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libreadline-dev libreadline6-dev libsigsegv2 libsm6 libssl1.0.0 libtcl8.5 libthai-data libthai0 libtiff5 libtinfo-dev libtk8.5 libunistring0 liburi-perl libwww-perl libwww-robotrules-perl libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl libxml2 libxrender1 libxss1 libxt6 m4 man-db mime-support netbase openssl po-debconf python python-minimal python-scour python2.7 python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal r-base-core r-base-dev r-bioc-biocgenerics r-bioc-iranges tcl8.5 tk8.5 ucf unzip x11-common xdg-utils zip zlib1g-dev 0 upgraded, 136 newly installed, 0 to remove and 0 not upgraded. Need to get 57.6 MB of archives. After this operation, 166 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1 i386 2.1.0-4ubuntu1 [71.4 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main libmagic1 i386 1:5.14-2ubuntu1 [184 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main libssl1.0.0 i386 1.0.1f-1ubuntu1 [780 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-minimal i386 3.3.3-6 [394 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main mime-support all 3.54ubuntu1 [31.7 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main libmpdec2 i386 2.4.0-6 [73.3 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-stdlib i386 3.3.3-6 [1963 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main python3.3-minimal i386 3.3.3-6 [1306 kB] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main libasprintf0c2 i386 0.18.3.1-1ubuntu2 [6618 B] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main libglib2.0-0 i386 2.39.2-0ubuntu2 [1017 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main libpipeline1 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http://ftpmaster.internal/ubuntu/ trusty/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:77 http://ftpmaster.internal/ubuntu/ trusty/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:78 http://ftpmaster.internal/ubuntu/ trusty/main apparmor-easyprof all 2.8.0-0ubuntu37 [20.3 kB] Get:79 http://ftpmaster.internal/ubuntu/ trusty/main dh-apparmor all 2.8.0-0ubuntu37 [7316 B] Get:80 http://ftpmaster.internal/ubuntu/ trusty/main debhelper all 9.20131127ubuntu1 [604 kB] Get:81 http://ftpmaster.internal/ubuntu/ trusty/main liburi-perl all 1.60-1 [89.6 kB] Get:82 http://ftpmaster.internal/ubuntu/ trusty/main libencode-locale-perl all 1.03-1 [12.4 kB] Get:83 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-date-perl all 6.02-1 [10.4 kB] Get:84 http://ftpmaster.internal/ubuntu/ trusty/main libfile-listing-perl all 6.04-1 [9774 B] Get:85 http://ftpmaster.internal/ubuntu/ trusty/main libhtml-tagset-perl all 3.20-2 [13.5 kB] Get:86 http://ftpmaster.internal/ubuntu/ trusty/main libhtml-parser-perl i386 3.71-1build1 [97.8 kB] Get:87 http://ftpmaster.internal/ubuntu/ trusty/main libhtml-tree-perl all 5.03-1 [215 kB] Get:88 http://ftpmaster.internal/ubuntu/ trusty/main libio-html-perl all 1.00-1 [15.7 kB] Get:89 http://ftpmaster.internal/ubuntu/ trusty/main liblwp-mediatypes-perl all 6.02-1 [21.7 kB] Get:90 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-message-perl all 6.06-1 [78.7 kB] Get:91 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-cookies-perl all 6.00-2 [23.3 kB] Get:92 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-negotiate-perl all 6.00-2 [13.4 kB] Get:93 http://ftpmaster.internal/ubuntu/ trusty/main libnet-ssleay-perl i386 1.57-1 [243 kB] Get:94 http://ftpmaster.internal/ubuntu/ trusty/main libio-socket-ssl-perl all 1.76-2ubuntu1 [51.4 kB] Get:95 http://ftpmaster.internal/ubuntu/ trusty/main libnet-http-perl all 6.06-1 [24.2 kB] Get:96 http://ftpmaster.internal/ubuntu/ trusty/main liblwp-protocol-https-perl all 6.04-2 [7330 B] Get:97 http://ftpmaster.internal/ubuntu/ trusty/main libwww-robotrules-perl all 6.01-1 [14.1 kB] Get:98 http://ftpmaster.internal/ubuntu/ trusty/main libwww-perl all 6.05-2 [146 kB] Get:99 http://ftpmaster.internal/ubuntu/ trusty/main libxml-parser-perl i386 2.41-1build3 [299 kB] Get:100 http://ftpmaster.internal/ubuntu/ trusty/main intltool all 0.50.2-2 [52.0 kB] Get:101 http://ftpmaster.internal/ubuntu/ trusty/main dh-translations all 119 [21.5 kB] Get:102 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-stdlib i386 2.7.6-5 [1842 kB] Get:103 http://ftpmaster.internal/ubuntu/ trusty/main python2.7 i386 2.7.6-5 [193 kB] Get:104 http://ftpmaster.internal/ubuntu/ trusty/main python-minimal i386 2.7.5-5ubuntu3 [27.5 kB] Get:105 http://ftpmaster.internal/ubuntu/ trusty/main libpython-stdlib i386 2.7.5-5ubuntu3 [7010 B] Get:106 http://ftpmaster.internal/ubuntu/ trusty/main python i386 2.7.5-5ubuntu3 [133 kB] Get:107 http://ftpmaster.internal/ubuntu/ trusty/main python-scour all 0.26-3 [46.5 kB] Get:108 http://ftpmaster.internal/ubuntu/ trusty/main cdbs all 0.4.122ubuntu2 [42.1 kB] Get:109 http://ftpmaster.internal/ubuntu/ trusty/main libgfortran-4.8-dev i386 4.8.2-14ubuntu1 [243 kB] Get:110 http://ftpmaster.internal/ubuntu/ trusty/main gfortran-4.8 i386 4.8.2-14ubuntu1 [4562 kB] Get:111 http://ftpmaster.internal/ubuntu/ trusty/main gfortran i386 4:4.8.2-1ubuntu3 [1258 B] Get:112 http://ftpmaster.internal/ubuntu/ trusty/main libblas3 i386 1.2.20110419-7 [183 kB] Get:113 http://ftpmaster.internal/ubuntu/ trusty/main libblas-dev i386 1.2.20110419-7 [194 kB] Get:114 http://ftpmaster.internal/ubuntu/ trusty/main libbz2-dev i386 1.0.6-5 [31.9 kB] Get:115 http://ftpmaster.internal/ubuntu/ trusty/main libjpeg-turbo8-dev i386 1.3.0-0ubuntu2 [247 kB] Get:116 http://ftpmaster.internal/ubuntu/ trusty/main libjpeg8-dev i386 8c-2ubuntu8 [1546 B] Get:117 http://ftpmaster.internal/ubuntu/ trusty/main libjpeg-dev i386 8c-2ubuntu8 [1544 B] Get:118 http://ftpmaster.internal/ubuntu/ trusty/main liblapack3 i386 3.5.0-2 [1497 kB] Get:119 http://ftpmaster.internal/ubuntu/ trusty/main liblapack-dev i386 3.5.0-2 [1506 kB] Get:120 http://ftpmaster.internal/ubuntu/ trusty/main libtinfo-dev i386 5.9+20131221-1ubuntu1 [71.2 kB] Get:121 http://ftpmaster.internal/ubuntu/ trusty/main libncurses5-dev i386 5.9+20131221-1ubuntu1 [166 kB] Get:122 http://ftpmaster.internal/ubuntu/ trusty/main libpaper-utils i386 1.1.24+nmu2ubuntu3 [8096 B] Get:123 http://ftpmaster.internal/ubuntu/ trusty/main libpcre3-dev i386 1:8.31-2ubuntu2 [232 kB] Get:124 http://ftpmaster.internal/ubuntu/ trusty/main zlib1g-dev i386 1:1.2.8.dfsg-1ubuntu1 [181 kB] Get:125 http://ftpmaster.internal/ubuntu/ trusty/main libpng12-dev i386 1.2.49-5ubuntu1 [204 kB] Get:126 http://ftpmaster.internal/ubuntu/ trusty/main libreadline6-dev i386 6.2-9ubuntu1 [249 kB] Get:127 http://ftpmaster.internal/ubuntu/ trusty/main libreadline-dev i386 6.2-9ubuntu1 [936 B] Get:128 http://ftpmaster.internal/ubuntu/ trusty/main zip i386 3.0-8 [255 kB] Get:129 http://ftpmaster.internal/ubuntu/ trusty/main unzip i386 6.0-9ubuntu1 [183 kB] Get:130 http://ftpmaster.internal/ubuntu/ trusty/main xdg-utils all 1.1.0~rc1-2ubuntu7 [65.6 kB] Get:131 http://ftpmaster.internal/ubuntu/ trusty/main tcl8.5 i386 8.5.15-2ubuntu1 [13.9 kB] Get:132 http://ftpmaster.internal/ubuntu/ trusty/main tk8.5 i386 8.5.15-2ubuntu2 [12.0 kB] Get:133 http://ftpmaster.internal/ubuntu/ trusty/universe r-base-core i386 3.0.2-1ubuntu1 [21.3 MB] Get:134 http://ftpmaster.internal/ubuntu/ trusty/universe r-base-dev all 3.0.2-1ubuntu1 [3952 B] Get:135 http://ftpmaster.internal/ubuntu/ trusty/universe r-bioc-biocgenerics all 0.8.0-1 [386 kB] Get:136 http://ftpmaster.internal/ubuntu/ trusty-proposed/universe r-bioc-iranges i386 1.20.6-1ubuntu1 [1849 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 57.6 MB in 6s (8615 kB/s) Selecting previously unselected package libexpat1:i386. 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Setting up gfortran (4:4.8.2-1ubuntu3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode Setting up libblas3 (1.2.20110419-7) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up libblas-dev (1.2.20110419-7) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up libbz2-dev:i386 (1.0.6-5) ... Setting up libjpeg-turbo8-dev:i386 (1.3.0-0ubuntu2) ... Setting up libjpeg8-dev:i386 (8c-2ubuntu8) ... Setting up libjpeg-dev:i386 (8c-2ubuntu8) ... Setting up liblapack3 (3.5.0-2) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up liblapack-dev (3.5.0-2) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libtinfo-dev:i386 (5.9+20131221-1ubuntu1) ... Setting up libncurses5-dev:i386 (5.9+20131221-1ubuntu1) ... Setting up libpaper-utils (1.1.24+nmu2ubuntu3) ... Setting up libpcre3-dev:i386 (1:8.31-2ubuntu2) ... Setting up zlib1g-dev:i386 (1:1.2.8.dfsg-1ubuntu1) ... Setting up libpng12-dev (1.2.49-5ubuntu1) ... Setting up libreadline6-dev:i386 (6.2-9ubuntu1) ... Setting up libreadline-dev:i386 (6.2-9ubuntu1) ... Setting up zip (3.0-8) ... Setting up unzip (6.0-9ubuntu1) ... Setting up xdg-utils (1.1.0~rc1-2ubuntu7) ... Setting up tcl8.5 (8.5.15-2ubuntu1) ... Setting up tk8.5 (8.5.15-2ubuntu2) ... Setting up r-base-core (3.0.2-1ubuntu1) ... Creating config file /etc/R/Renviron with new version Setting up r-bioc-biocgenerics (0.8.0-1) ... Setting up r-bioc-iranges (1.20.6-1ubuntu1) ... Setting up libwww-perl (6.05-2) ... Setting up libxml-parser-perl (2.41-1build3) ... Setting up intltool (0.50.2-2) ... Setting up python3 (3.3.3-1) ... running python rtupdate hooks for python3.3... running python post-rtupdate hooks for python3.3... Setting up dh-python (1.20131021-1ubuntu8) ... Setting up apparmor-easyprof (2.8.0-0ubuntu37) ... Setting up dh-apparmor (2.8.0-0ubuntu37) ... Setting up debhelper (9.20131127ubuntu1) ... Setting up liblwp-protocol-https-perl (6.04-2) ... Setting up dh-translations (119) ... Setting up cdbs (0.4.122ubuntu2) ... Setting up r-base-dev (3.0.2-1ubuntu1) ... Processing triggers for libc-bin ... Processing triggers for ca-certificates ... Updating certificates in /etc/ssl/certs... 166 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d....done. Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.18-0ubuntu6 make_3.81-8.2ubuntu3 dpkg-dev_1.17.1ubuntu1 gcc-4.8_4.8.2-14ubuntu1 g++-4.8_4.8.2-14ubuntu1 binutils_2.24-2ubuntu2 libstdc++-4.8-dev_4.8.2-14ubuntu1 libstdc++6_4.8.2-14ubuntu1 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::Quilt gpgv: Signature made Thu Jan 16 12:34:42 2014 UTC using DSA key ID C09FD35A gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./r-bioc-xvector_0.2.0-2.dsc dpkg-source: info: extracting r-bioc-xvector in r-bioc-xvector-0.2.0 dpkg-source: info: unpacking r-bioc-xvector_0.2.0.orig.tar.gz dpkg-source: info: unpacking r-bioc-xvector_0.2.0-2.debian.tar.gz dpkg-buildpackage: source package r-bioc-xvector dpkg-buildpackage: source version 0.2.0-2 dpkg-buildpackage: source distribution unstable dpkg-source --before-build r-bioc-xvector-0.2.0 dpkg-buildpackage: host architecture i386 /usr/bin/fakeroot debian/rules clean test -x debian/rules dh_clean if test -d src; then \ find src -regex ".*\.o" | \ xargs --no-run-if-empty -r rm; \ fi rm -f config.log config.status debian/rules build test -x debian/rules mkdir -p "." /usr/bin/fakeroot debian/rules binary test -x debian/rules dh_testroot dh_prep dh_installdirs -A mkdir -p "." dh_installdirs usr/lib/R/site-library echo "R:Depends=r-base-core (>= 3.0.2-1ubuntu1)" >> debian/r-bioc-xvector.substvars if test -f /usr/bin/xvfb-run; then \ xvfb-run -a \ R CMD INSTALL -l /build/buildd/r-bioc-xvector-0.2.0/debian/r-bioc-xvector/usr/lib/R/site-library --clean \ . ; \ else \ R CMD INSTALL -l /build/buildd/r-bioc-xvector-0.2.0/debian/r-bioc-xvector/usr/lib/R/site-library \ --clean . ;\ fi * installing *source* package 'XVector' ... ** libs make[1]: Entering directory `/build/buildd/r-bioc-xvector-0.2.0/src' gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c IRanges_stubs.c -o IRanges_stubs.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c Ocopy_byteblocks.c -o Ocopy_byteblocks.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c R_init_XVector.c -o R_init_XVector.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c SharedDouble_class.c -o SharedDouble_class.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c SharedInteger_class.c -o SharedInteger_class.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c SharedRaw_class.c -o SharedRaw_class.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c SharedVector_class.c -o SharedVector_class.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c XRawList_comparison.c -o XRawList_comparison.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c XVectorList_class.c -o XVectorList_class.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c XVector_class.c -o XVector_class.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c slice_methods.c -o slice_methods.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c vector_copy.c -o vector_copy.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -fpic -O3 -pipe -g -c view_summarization_methods.c -o view_summarization_methods.o gcc -std=gnu99 -shared -o XVector.so IRanges_stubs.o Ocopy_byteblocks.o R_init_XVector.o SharedDouble_class.o SharedInteger_class.o SharedRaw_class.o SharedVector_class.o XRawList_comparison.o XVectorList_class.o XVector_class.o slice_methods.o vector_copy.o view_summarization_methods.o -L/usr/lib/R/lib -lR make[1]: Leaving directory `/build/buildd/r-bioc-xvector-0.2.0/src' make[1]: Entering directory `/build/buildd/r-bioc-xvector-0.2.0/src' make[1]: Leaving directory `/build/buildd/r-bioc-xvector-0.2.0/src' installing to /build/buildd/r-bioc-xvector-0.2.0/debian/r-bioc-xvector/usr/lib/R/site-library/XVector/libs ** R ** inst ** preparing package for lazy loading Creating a generic function for 'toString' from package 'base' in package 'XVector' ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (XVector) rm -vf /build/buildd/r-bioc-xvector-0.2.0/debian/r-bioc-xvector/usr/lib/R/site-library/R.css \ /build/buildd/r-bioc-xvector-0.2.0/debian/r-bioc-xvector/usr/lib/R/site-library/XVector/COPYING \ /build/buildd/r-bioc-xvector-0.2.0/debian/r-bioc-xvector/usr/lib/R/site-library/XVector/LICENSE.txt if test -f debian/overrides; then \ install -d /build/buildd/r-bioc-xvector-0.2.0/debian/r-bioc-xvector/usr/share/lintian/overrides ; \ install -m 0644 debian/overrides \ /build/buildd/r-bioc-xvector-0.2.0/debian/r-bioc-xvector/usr/share/lintian/overrides/r-bioc-xvector; \ fi Adding cdbs dependencies to debian/r-bioc-xvector.substvars dh_installdirs -pr-bioc-xvector dh_installdocs -pr-bioc-xvector ./TODO dh_installexamples -pr-bioc-xvector dh_installman -pr-bioc-xvector dh_installinfo -pr-bioc-xvector dh_installmenu -pr-bioc-xvector dh_installcron -pr-bioc-xvector dh_installinit -pr-bioc-xvector dh_installdebconf -pr-bioc-xvector dh_installemacsen -pr-bioc-xvector dh_installcatalogs -pr-bioc-xvector dh_installpam -pr-bioc-xvector dh_installlogrotate -pr-bioc-xvector dh_installlogcheck -pr-bioc-xvector dh_installchangelogs -pr-bioc-xvector dh_installudev -pr-bioc-xvector dh_lintian -pr-bioc-xvector dh_bugfiles -pr-bioc-xvector dh_install -pr-bioc-xvector dh_link -pr-bioc-xvector dh_installmime -pr-bioc-xvector dh_installgsettings -pr-bioc-xvector dh_strip -pr-bioc-xvector dh_strip debug symbol extraction: all non-arch-all packages for this build platform i386: r-bioc-xvector dh_strip debug symbol extraction: packages to act on: r-bioc-xvector dh_strip debug symbol extraction: ignored packages: Using buildid for compat level >= 9 dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-deb: building package `r-bioc-xvector-dbgsym' in `../r-bioc-xvector-dbgsym_0.2.0-2_i386.ddeb'. dh_compress -pr-bioc-xvector dh_fixperms -pr-bioc-xvector dh_makeshlibs -pr-bioc-xvector dh_installdeb -pr-bioc-xvector dh_perl -pr-bioc-xvector dh_shlibdeps -pr-bioc-xvector dh_gencontrol -pr-bioc-xvector dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe # only call dh_scour for packages in main if grep -q '^Component:[[:space:]]*main' /CurrentlyBuilding 2>/dev/null; then dh_scour -pr-bioc-xvector ; fi dh_md5sums -pr-bioc-xvector dh_builddeb -pr-bioc-xvector INFO: pkgstriptranslations version 119 pkgstriptranslations: processing r-bioc-xvector (in debian/r-bioc-xvector); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/r-bioc-xvector/DEBIAN/control, package r-bioc-xvector, directory debian/r-bioc-xvector pkgstripfiles: PNG optimization for package r-bioc-xvector took 0 s dpkg-deb: warning: 'debian/r-bioc-xvector/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `r-bioc-xvector' in `../r-bioc-xvector_0.2.0-2_i386.deb'. dpkg-genchanges -b -mUbuntu/amd64 Build Daemon >../r-bioc-xvector_0.2.0-2_i386.changes dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build r-bioc-xvector-0.2.0 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20140116-1720 Publishing debug debs. chroot-autobuild/build/buildd/r-bioc-xvector_0.2.0-2_i386.deb: new debian package, version 2.0. size 327784 bytes: control archive= 1483 bytes. 673 bytes, 13 lines control 2280 bytes, 28 lines md5sums Package: r-bioc-xvector Version: 0.2.0-2 Architecture: i386 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 576 Depends: r-base-core (>= 3.0.2-1ubuntu1), libc6 (>= 2.4), r-bioc-biocgenerics, r-bioc-iranges Section: gnu-r Priority: optional Homepage: http://www.bioconductor.org/packages/release/bioc/html/XVector.html Description: BioConductor representation and manpulation of external sequences This BioConductor package provides memory efficient S4 classes for storing sequences "externally" (behind an R external pointer, or on disk). chroot-autobuild/build/buildd/r-bioc-xvector_0.2.0-2_i386.deb: drwxr-xr-x root/root 0 2014-01-16 17:20 ./ drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/ drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/lib/ drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/lib/R/ drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/lib/R/site-library/ drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/ drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/Meta/ -rw-r--r-- root/root 1367 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/Meta/links.rds -rw-r--r-- root/root 1688 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/Meta/Rd.rds -rw-r--r-- root/root 1025 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/Meta/package.rds -rw-r--r-- root/root 682 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/Meta/nsInfo.rds -rw-r--r-- root/root 1774 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/Meta/hsearch.rds drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/R/ -rw-r--r-- root/root 1056 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/R/XVector -rw-r--r-- root/root 4478 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/R/XVector.rdx -rw-r--r-- root/root 326212 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/R/XVector.rdb drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/include/ -rw-r--r-- root/root 1204 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/include/XVector_defines.h -rw-r--r-- root/root 9380 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/include/_XVector_stubs.c -rw-r--r-- root/root 5174 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/include/XVector_interface.h drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/html/ -rw-r--r-- root/root 12700 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/html/00Index.html -rw-r--r-- root/root 1179 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/html/R.css -rw-r--r-- root/root 1123 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/DESCRIPTION drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/unitTests/ -rw-r--r-- root/root 539 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/unitTests/test_slice-methods.R -rw-r--r-- root/root 2264 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/unitTests/test_view-summarization-methods.R drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/libs/ -rw-r--r-- root/root 83752 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/libs/XVector.so -rw-r--r-- root/root 902 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/INDEX -rw-r--r-- root/root 2239 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/NAMESPACE drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/help/ -rw-r--r-- root/root 254 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/help/paths.rds -rw-r--r-- root/root 1449 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/help/aliases.rds -rw-r--r-- root/root 506 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/help/XVector.rdx -rw-r--r-- root/root 7481 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/help/AnIndex -rw-r--r-- root/root 45393 2014-01-16 17:20 ./usr/lib/R/site-library/XVector/help/XVector.rdb drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/share/ drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2014-01-16 17:20 ./usr/share/doc/r-bioc-xvector/ -rw-r--r-- root/root 285 2013-11-05 07:54 ./usr/share/doc/r-bioc-xvector/README.test -rw-r--r-- root/root 17 2013-10-14 22:02 ./usr/share/doc/r-bioc-xvector/TODO -rw-r--r-- root/root 5290 2013-11-04 21:35 ./usr/share/doc/r-bioc-xvector/copyright -rw-r--r-- root/root 305 2014-01-16 12:32 ./usr/share/doc/r-bioc-xvector/changelog.Debian.gz r-bioc-xvector_0.2.0-2_i386.changes: Format: 1.8 Date: Thu, 16 Jan 2014 13:31:06 +0100 Source: r-bioc-xvector Binary: r-bioc-xvector Architecture: i386 Version: 0.2.0-2 Distribution: trusty-proposed Urgency: medium Maintainer: Ubuntu/amd64 Build Daemon Changed-By: Andreas Tille Description: r-bioc-xvector - BioConductor representation and manpulation of external sequences Closes: 735537 Changes: r-bioc-xvector (0.2.0-2) unstable; urgency=medium . [ Martin Pitt ] * debian/tests/control: Add missing r-cran-runit test dependency, and allow stderr output. Closes: #735537 . [ Andreas Tille ] * Standards-Version: 3.9.5 Checksums-Sha1: 1c4ae7e55df06563da3cfdf3a398477f93578ef6 327784 r-bioc-xvector_0.2.0-2_i386.deb Checksums-Sha256: 6c4c2f249deaa7b4f0a23d3fd3a3ef999fcfbaf6e5d6a9041688d05eeb552568 327784 r-bioc-xvector_0.2.0-2_i386.deb Files: 99ed49ad703b690c7176dc7e1476f17d 327784 gnu-r optional r-bioc-xvector_0.2.0-2_i386.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20140116-1720 Build needed 00:00:16, 1508k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-5469622'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-5469622/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-5469622'] Unmounting chroot for build PACKAGEBUILD-5469622... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-5469622'] Removing build PACKAGEBUILD-5469622