RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux ross 3.2.0-54-powerpc64-smp #82-Ubuntu SMP Tue Sep 10 20:15:55 UTC 2013 ppc64 Buildd toolchain package versions: launchpad-buildd_122~0.IS.8.04 python-lpbuildd_122~0.IS.8.04 bzr_2.5.1-0ubuntu2 dpkg-dev_1.16.1.2ubuntu7.4. Syncing the system clock with the buildd NTP service... 5 Jun 23:40:08 ntpdate[17833]: adjust time server 10.211.37.1 offset 0.000050 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-6074517', '/home/buildd/filecache-default/50636025247bf1b1e8d6f0848ab4f73fc9c05cbb'] Unpacking chroot for build PACKAGEBUILD-6074517 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-6074517'] Mounting chroot for build PACKAGEBUILD-6074517 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-6074517', 'deb http://ftpmaster.internal/ubuntu utopic main universe', 'deb http://ftpmaster.internal/ubuntu utopic-security main universe', 'deb http://ftpmaster.internal/ubuntu utopic-updates main universe', 'deb http://ftpmaster.internal/ubuntu utopic-proposed main universe'] Overriding sources.list in build-PACKAGEBUILD-6074517 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-6074517', 'powerpc'] Updating debian chroot for build PACKAGEBUILD-6074517 Ign http://archive-team.internal utopic InRelease Ign http://archive-team.internal utopic Release.gpg Get:1 http://archive-team.internal utopic Release [744 B] Ign http://ftpmaster.internal utopic InRelease Ign http://ftpmaster.internal utopic-security InRelease Ign http://ftpmaster.internal utopic-updates InRelease Ign http://ftpmaster.internal utopic-proposed InRelease Get:2 http://ftpmaster.internal utopic Release.gpg [933 B] Get:3 http://ftpmaster.internal utopic-security Release.gpg [933 B] Get:4 http://archive-team.internal utopic/main powerpc Packages Get:5 http://ftpmaster.internal utopic-updates Release.gpg [933 B] Get:6 http://ftpmaster.internal utopic-proposed Release.gpg [933 B] Get:7 http://ftpmaster.internal utopic Release [58.5 kB] Ign http://archive-team.internal utopic/main Translation-en Get:8 http://ftpmaster.internal utopic-security Release [58.5 kB] Get:9 http://ftpmaster.internal utopic-updates Release [58.5 kB] Get:10 http://ftpmaster.internal utopic-proposed Release [58.5 kB] Get:11 http://ftpmaster.internal utopic/main powerpc Packages [1309 kB] Get:12 http://ftpmaster.internal utopic/universe powerpc Packages [5913 kB] Get:13 http://ftpmaster.internal utopic/main Translation-en [767 kB] Get:14 http://ftpmaster.internal utopic/universe Translation-en [4206 kB] Get:15 http://ftpmaster.internal utopic-security/main powerpc Packages [14 B] Get:16 http://ftpmaster.internal utopic-security/universe powerpc Packages [14 B] Get:17 http://ftpmaster.internal utopic-security/main Translation-en [14 B] Get:18 http://ftpmaster.internal utopic-security/universe Translation-en [14 B] Get:19 http://ftpmaster.internal utopic-updates/main powerpc Packages [14 B] Get:20 http://ftpmaster.internal utopic-updates/universe powerpc Packages [14 B] Get:21 http://ftpmaster.internal utopic-updates/main Translation-en [14 B] Get:22 http://ftpmaster.internal utopic-updates/universe Translation-en [14 B] Get:23 http://ftpmaster.internal utopic-proposed/main powerpc Packages [19.4 kB] Get:24 http://ftpmaster.internal utopic-proposed/universe powerpc Packages [219 kB] Get:25 http://ftpmaster.internal utopic-proposed/main Translation-en [16.3 kB] Get:26 http://ftpmaster.internal utopic-proposed/universe Translation-en [128 kB] Fetched 12.8 MB in 15s (841 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: init-system-helpers The following packages will be upgraded: bash binutils bsdutils busybox-initramfs ca-certificates cpp cpp-4.8 e2fslibs e2fsprogs fakeroot g++ g++-4.8 gcc gcc-4.8 gcc-4.8-base gcc-4.9-base hostname ifupdown initramfs-tools initramfs-tools-bin initscripts kmod libasan0 libatomic1 libblkid1 libcgmanager0 libcomerr2 libdbus-1-3 libdebconfclient0 libdrm2 libfakeroot libffi6 libgcc-4.8-dev libgcc1 libgmp10 libgnutls26 libgnutls28 libgomp1 libkmod2 libmount1 libnih-dbus1 libnih1 libpam-modules libpam-modules-bin libpam-runtime libpam0g libplymouth2 libprocps3 libselinux1 libsemanage-common libsemanage1 libsepol1 libss2 libssl1.0.0 libstdc++-4.8-dev libstdc++6 libtasn1-6 libudev1 libuuid1 linux-libc-dev login lsb-base make module-init-tools mount mountall openssl passwd plymouth procps sysv-rc sysvinit-utils tzdata udev upstart util-linux 76 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 28.1 MB of archives. After this operation, 1933 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ utopic/main bash powerpc 4.3-7ubuntu3 [520 kB] Get:2 http://ftpmaster.internal/ubuntu/ utopic/main e2fslibs powerpc 1.42.10-1ubuntu1 [184 kB] Get:3 http://ftpmaster.internal/ubuntu/ utopic/main e2fsprogs powerpc 1.42.10-1ubuntu1 [663 kB] Get:4 http://ftpmaster.internal/ubuntu/ utopic/main libselinux1 powerpc 2.3-1 [53.8 kB] Get:5 http://ftpmaster.internal/ubuntu/ utopic/main init-system-helpers all 1.18 [12.6 kB] Get:6 http://ftpmaster.internal/ubuntu/ utopic/main plymouth powerpc 0.8.8-0ubuntu18 [86.3 kB] Get:7 http://ftpmaster.internal/ubuntu/ utopic/main libplymouth2 powerpc 0.8.8-0ubuntu18 [68.9 kB] Get:8 http://ftpmaster.internal/ubuntu/ utopic/main initramfs-tools-bin powerpc 0.103ubuntu7 [8786 B] Get:9 http://ftpmaster.internal/ubuntu/ utopic/main initramfs-tools all 0.103ubuntu7 [44.6 kB] Get:10 http://ftpmaster.internal/ubuntu/ utopic/main mountall powerpc 2.54 [49.4 kB] Get:11 http://ftpmaster.internal/ubuntu/ utopic/main upstart powerpc 1.12.1-0ubuntu8 [295 kB] Get:12 http://ftpmaster.internal/ubuntu/ utopic/main lsb-base all 4.1+Debian11ubuntu8 [13.1 kB] Get:13 http://ftpmaster.internal/ubuntu/ utopic/main initscripts powerpc 2.88dsf-41ubuntu16 [35.1 kB] Get:14 http://ftpmaster.internal/ubuntu/ utopic/main sysv-rc all 2.88dsf-41ubuntu16 [37.8 kB] Get:15 http://ftpmaster.internal/ubuntu/ utopic/main sysvinit-utils powerpc 2.88dsf-41ubuntu16 [48.2 kB] Get:16 http://ftpmaster.internal/ubuntu/ utopic/main libdbus-1-3 powerpc 1.6.18-0ubuntu8 [115 kB] Get:17 http://ftpmaster.internal/ubuntu/ utopic/main libnih-dbus1 powerpc 1.0.3-4ubuntu26 [13.0 kB] Get:18 http://ftpmaster.internal/ubuntu/ utopic/main libnih1 powerpc 1.0.3-4ubuntu26 [42.9 kB] Get:19 http://ftpmaster.internal/ubuntu/ utopic/main libpam0g powerpc 1.1.8-3ubuntu1 [55.3 kB] Get:20 http://ftpmaster.internal/ubuntu/ utopic/main libsemanage-common all 2.3-1 [6278 B] Get:21 http://ftpmaster.internal/ubuntu/ utopic/main libsemanage1 powerpc 2.3-1 [60.4 kB] Get:22 http://ftpmaster.internal/ubuntu/ utopic/main libsepol1 powerpc 2.3-1 [90.3 kB] Get:23 http://ftpmaster.internal/ubuntu/ utopic/main libpam-modules-bin powerpc 1.1.8-3ubuntu1 [29.0 kB] Get:24 http://ftpmaster.internal/ubuntu/ utopic/main libpam-modules powerpc 1.1.8-3ubuntu1 [224 kB] Get:25 http://ftpmaster.internal/ubuntu/ utopic/main passwd powerpc 1:4.1.5.1-1.1ubuntu1 [708 kB] Get:26 http://ftpmaster.internal/ubuntu/ utopic/main libuuid1 powerpc 2.20.1-5.1ubuntu21 [12.0 kB] Get:27 http://ftpmaster.internal/ubuntu/ utopic/main libblkid1 powerpc 2.20.1-5.1ubuntu21 [61.7 kB] Get:28 http://ftpmaster.internal/ubuntu/ utopic/main libcgmanager0 powerpc 0.26-0ubuntu3 [20.2 kB] Get:29 http://ftpmaster.internal/ubuntu/ utopic/main libkmod2 powerpc 16-2ubuntu4 [37.1 kB] Get:30 http://ftpmaster.internal/ubuntu/ utopic/main tzdata all 2014d-1 [190 kB] Get:31 http://ftpmaster.internal/ubuntu/ utopic/main util-linux powerpc 2.20.1-5.1ubuntu21 [437 kB] Get:32 http://ftpmaster.internal/ubuntu/ utopic-proposed/main libprocps3 powerpc 1:3.3.9-1ubuntu5 [29.4 kB] Get:33 http://ftpmaster.internal/ubuntu/ utopic-proposed/main procps powerpc 1:3.3.9-1ubuntu5 [202 kB] Get:34 http://ftpmaster.internal/ubuntu/ utopic/main udev powerpc 204-10ubuntu8 [729 kB] Get:35 http://ftpmaster.internal/ubuntu/ utopic/main libudev1 powerpc 204-10ubuntu8 [39.2 kB] Get:36 http://ftpmaster.internal/ubuntu/ utopic/main busybox-initramfs powerpc 1:1.22.0-6ubuntu1 [171 kB] Get:37 http://ftpmaster.internal/ubuntu/ utopic/main kmod powerpc 16-2ubuntu4 [82.1 kB] Get:38 http://ftpmaster.internal/ubuntu/ utopic/main module-init-tools all 16-2ubuntu4 [2084 B] Get:39 http://ftpmaster.internal/ubuntu/ utopic/main libdrm2 powerpc 2.4.54-1 [21.3 kB] Get:40 http://ftpmaster.internal/ubuntu/ utopic/main ifupdown powerpc 0.7.48.1ubuntu4 [48.4 kB] Get:41 http://ftpmaster.internal/ubuntu/ utopic/main mount powerpc 2.20.1-5.1ubuntu21 [108 kB] Get:42 http://ftpmaster.internal/ubuntu/ utopic/main hostname powerpc 3.15ubuntu2 [11.3 kB] Get:43 http://ftpmaster.internal/ubuntu/ utopic/main login powerpc 1:4.1.5.1-1.1ubuntu1 [297 kB] Get:44 http://ftpmaster.internal/ubuntu/ utopic/main bsdutils powerpc 1:2.20.1-5.1ubuntu21 [33.8 kB] Get:45 http://ftpmaster.internal/ubuntu/ utopic/main libgomp1 powerpc 4.9.0-5ubuntu2 [36.1 kB] Get:46 http://ftpmaster.internal/ubuntu/ utopic/main gcc-4.9-base powerpc 4.9.0-5ubuntu2 [15.5 kB] Get:47 http://ftpmaster.internal/ubuntu/ utopic/main libstdc++6 powerpc 4.9.0-5ubuntu2 [288 kB] Get:48 http://ftpmaster.internal/ubuntu/ utopic/main libatomic1 powerpc 4.9.0-5ubuntu2 [7354 B] Get:49 http://ftpmaster.internal/ubuntu/ utopic/main libgcc1 powerpc 1:4.9.0-5ubuntu2 [35.3 kB] Get:50 http://ftpmaster.internal/ubuntu/ utopic/main libcomerr2 powerpc 1.42.10-1ubuntu1 [63.2 kB] Get:51 http://ftpmaster.internal/ubuntu/ utopic/main libdebconfclient0 powerpc 0.191ubuntu1 [6022 B] Get:52 http://ftpmaster.internal/ubuntu/ utopic/main libmount1 powerpc 2.20.1-5.1ubuntu21 [52.7 kB] Get:53 http://ftpmaster.internal/ubuntu/ utopic/main libss2 powerpc 1.42.10-1ubuntu1 [67.2 kB] Get:54 http://ftpmaster.internal/ubuntu/ utopic-proposed/main libffi6 powerpc 3.1-2 [16.9 kB] Get:55 http://ftpmaster.internal/ubuntu/ utopic/main libgmp10 powerpc 2:6.0.0+dfsg-4 [193 kB] Get:56 http://ftpmaster.internal/ubuntu/ utopic/main libtasn1-6 powerpc 3.6-1 [39.9 kB] Get:57 http://ftpmaster.internal/ubuntu/ utopic/main libgnutls28 powerpc 3.2.15-1 [380 kB] Get:58 http://ftpmaster.internal/ubuntu/ utopic/main libssl1.0.0 powerpc 1.0.1f-1ubuntu4 [693 kB] Get:59 http://ftpmaster.internal/ubuntu/ utopic/main libgnutls26 powerpc 2.12.23-15ubuntu2 [334 kB] Get:60 http://ftpmaster.internal/ubuntu/ utopic/main g++-4.8 powerpc 4.8.3-2ubuntu1 [5963 kB] Get:61 http://ftpmaster.internal/ubuntu/ utopic/main gcc-4.8 powerpc 4.8.3-2ubuntu1 [4567 kB] Get:62 http://ftpmaster.internal/ubuntu/ utopic/main cpp-4.8 powerpc 4.8.3-2ubuntu1 [4156 kB] Get:63 http://ftpmaster.internal/ubuntu/ utopic/main binutils powerpc 2.24.51.20140604-1ubuntu2 [2041 kB] Get:64 http://ftpmaster.internal/ubuntu/ utopic/main libstdc++-4.8-dev powerpc 4.8.3-2ubuntu1 [1066 kB] Get:65 http://ftpmaster.internal/ubuntu/ utopic/main libgcc-4.8-dev powerpc 4.8.3-2ubuntu1 [285 kB] Get:66 http://ftpmaster.internal/ubuntu/ utopic/main libasan0 powerpc 4.8.3-2ubuntu1 [62.8 kB] Get:67 http://ftpmaster.internal/ubuntu/ utopic/main gcc-4.8-base powerpc 4.8.3-2ubuntu1 [15.1 kB] Get:68 http://ftpmaster.internal/ubuntu/ utopic/main libpam-runtime all 1.1.8-3ubuntu1 [39.7 kB] Get:69 http://ftpmaster.internal/ubuntu/ utopic/main openssl powerpc 1.0.1f-1ubuntu4 [466 kB] Get:70 http://ftpmaster.internal/ubuntu/ utopic/main ca-certificates all 20140325 [184 kB] Get:71 http://ftpmaster.internal/ubuntu/ utopic/main cpp powerpc 4:4.8.2-4ubuntu1 [27.6 kB] Get:72 http://ftpmaster.internal/ubuntu/ utopic/main libfakeroot powerpc 1.20-3ubuntu3 [21.3 kB] Get:73 http://ftpmaster.internal/ubuntu/ utopic/main fakeroot powerpc 1.20-3ubuntu3 [54.1 kB] Get:74 http://ftpmaster.internal/ubuntu/ utopic/main gcc powerpc 4:4.8.2-4ubuntu1 [5214 B] Get:75 http://ftpmaster.internal/ubuntu/ utopic/main g++ powerpc 4:4.8.2-4ubuntu1 [1598 B] Get:76 http://ftpmaster.internal/ubuntu/ utopic/main linux-libc-dev powerpc 3.15.0-5.10 [749 kB] Get:77 http://ftpmaster.internal/ubuntu/ utopic/main make powerpc 4.0-7 [139 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 28.1 MB in 2s (11.2 MB/s) (Reading database ... 11721 files and directories currently installed.) Preparing to unpack .../bash_4.3-7ubuntu3_powerpc.deb ... Unpacking bash (4.3-7ubuntu3) over (4.3-7ubuntu1) ... Setting up bash (4.3-7ubuntu3) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 11721 files and directories currently installed.) Preparing to unpack .../e2fslibs_1.42.10-1ubuntu1_powerpc.deb ... Unpacking e2fslibs:powerpc (1.42.10-1ubuntu1) over (1.42.9-3ubuntu1) ... Setting up e2fslibs:powerpc (1.42.10-1ubuntu1) ... Processing triggers for libc-bin (2.19-0ubuntu6) ... (Reading database ... 11721 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.42.10-1ubuntu1_powerpc.deb ... Unpacking e2fsprogs (1.42.10-1ubuntu1) over (1.42.9-3ubuntu1) ... Setting up e2fsprogs (1.42.10-1ubuntu1) ... (Reading database ... 11721 files and directories currently installed.) Preparing to unpack .../libselinux1_2.3-1_powerpc.deb ... 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Setting up g++ (4:4.8.2-4ubuntu1) ... Setting up linux-libc-dev:powerpc (3.15.0-5.10) ... Setting up make (4.0-7) ... Setting up mountall (2.54) ... Installing new version of config file /etc/init/mounted-proc.conf ... Setting up initscripts (2.88dsf-41ubuntu16) ... Installing new version of config file /etc/init.d/ondemand ... Setting up procps (1:3.3.9-1ubuntu5) ... Installing new version of config file /etc/init/procps.conf ... invoke-rc.d: policy-rc.d denied execution of start. Setting up udev (204-10ubuntu8) ... Installing new version of config file /etc/init/udev-finish.conf ... Installing new version of config file /etc/init.d/udev ... invoke-rc.d: policy-rc.d denied execution of restart. update-initramfs: deferring update (trigger activated) update-rc.d: warning: default start runlevel arguments (2 3 4 5) do not match udev Default-Start values (S) update-rc.d: warning: default stop runlevel arguments (0 1 6) do not match udev Default-Stop values (none) update-rc.d: warning: default start runlevel arguments (2 3 4 5) do not match udev-finish Default-Start values (S) update-rc.d: warning: default stop runlevel arguments (0 1 6) do not match udev-finish Default-Stop values (none) update-rc.d: warning: default start runlevel arguments (2 3 4 5) do not match lvm2 Default-Start values (S) update-rc.d: warning: default stop runlevel arguments (0 1 6) do not match lvm2 Default-Stop values (none) Setting up initramfs-tools (0.103ubuntu7) ... update-initramfs: deferring update (trigger activated) Setting up ifupdown (0.7.48.1ubuntu4) ... Installing new version of config file /etc/init/network-interface.conf ... update-rc.d: warning: default start runlevel arguments (2 3 4 5) do not match networking Default-Start values (S) update-rc.d: warning: default stop runlevel arguments (0 1 6) do not match networking Default-Stop values (0 6) Setting up upstart (1.12.1-0ubuntu8) ... Installing new version of config file /etc/upstart-xsessions ... Installing new version of config file /etc/cron.daily/upstart ... Setting up plymouth (0.8.8-0ubuntu18) ... update-initramfs: deferring update (trigger activated) Processing triggers for libc-bin (2.19-0ubuntu6) ... Processing triggers for ca-certificates (20140325) ... Updating certificates in /etc/ssl/certs... 7 added, 3 removed; done. Running hooks in /etc/ca-certificates/update.d....done. Processing triggers for initramfs-tools (0.103ubuntu7) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-6074517', 'powerpc', 'utopic-proposed', '--nolog', '--batch', '--archive=ubuntu', '--dist=utopic-proposed', '--purpose=PRIMARY', '--architecture=powerpc', '--comp=universe', 'r-cran-ape_3.1-2-1.dsc'] Initiating build PACKAGEBUILD-6074517 with 2 jobs across 2 processor cores. Kernel reported to sbuild: 3.2.0-54-powerpc64-smp #82-Ubuntu SMP Tue Sep 10 20:15:55 UTC 2013 ppc Automatic build of r-cran-ape_3.1-2-1 on ross by sbuild/powerpc 1.170.5 Build started at 20140605-2343 ****************************************************************************** r-cran-ape_3.1-2-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 9.0.0), r-base-dev (>= 3.1.0), r-cran-nlme, r-cran-lattice, cdbs Checking for already installed source dependencies... debhelper: missing r-base-dev: missing r-cran-nlme: missing r-cran-lattice: missing cdbs: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper r-base-dev r-cran-nlme r-cran-lattice cdbs Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf automake autotools-dev bsdmainutils dh-apparmor dh-translations file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base intltool intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libencode-locale-perl libexpat1 libfile-listing-perl libfontconfig1 libfreetype6 libgfortran-4.8-dev libgfortran3 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libice6 libio-html-perl libio-socket-ssl-perl libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblwp-mediatypes-perl liblwp-protocol-https-perl liblzma-dev libmagic1 libncurses5-dev libnet-http-perl libnet-ssleay-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-dev libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libreadline-dev libreadline6-dev libsigsegv2 libsm6 libtcl8.5 libthai-data libthai0 libtiff5 libtinfo-dev libtk8.5 libunistring0 liburi-perl libwww-perl libwww-robotrules-perl libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl libxml2 libxrender1 libxss1 libxt6 m4 man-db mime-support netbase po-debconf python python-minimal python-scour python2.7 python2.7-minimal r-base-core ucf unzip x11-common xdg-utils zip zlib1g-dev Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc libtool wamerican wordlist whois vacation devscripts dh-make apparmor-easyprof gettext-doc gfortran-multilib gfortran-doc gfortran-4.8-multilib gfortran-4.8-doc libgfortran3-dbg groff libdata-dump-perl libcrypt-ssleay-perl liblzma-doc ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp tcl8.5 tk8.5 libauthen-ntlm-perl less www-browser libmail-box-perl python-doc python-tk python-rsvg python-cairo python2.7-doc binfmt-support r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo gvfs-bin Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info libhtml-format-perl libio-socket-inet6-perl libio-socket-ip-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl xml-core libmail-sendmail-perl r-recommended r-doc-html libfile-mimeinfo-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autotools-dev bsdmainutils cdbs debhelper dh-apparmor dh-translations file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base intltool intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libencode-locale-perl libexpat1 libfile-listing-perl libfontconfig1 libfreetype6 libgfortran-4.8-dev libgfortran3 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libice6 libio-html-perl libio-socket-ssl-perl libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblwp-mediatypes-perl liblwp-protocol-https-perl liblzma-dev libmagic1 libncurses5-dev libnet-http-perl libnet-ssleay-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-dev libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libreadline-dev libreadline6-dev libsigsegv2 libsm6 libtcl8.5 libthai-data libthai0 libtiff5 libtinfo-dev libtk8.5 libunistring0 liburi-perl libwww-perl libwww-robotrules-perl libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl libxml2 libxrender1 libxss1 libxt6 m4 man-db mime-support netbase po-debconf python python-minimal python-scour python2.7 python2.7-minimal r-base-core r-base-dev r-cran-lattice r-cran-nlme ucf unzip x11-common xdg-utils zip zlib1g-dev 0 upgraded, 122 newly installed, 0 to remove and 0 not upgraded. Need to get 49.2 MB of archives. After this operation, 147 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ utopic/main libexpat1 powerpc 2.1.0-5ubuntu1 [63.4 kB] Get:2 http://ftpmaster.internal/ubuntu/ utopic/main libmagic1 powerpc 1:5.18-1ubuntu1 [196 kB] Get:3 http://ftpmaster.internal/ubuntu/ utopic/main libasprintf0c2 powerpc 0.18.3.2-1ubuntu1 [6484 B] Get:4 http://ftpmaster.internal/ubuntu/ utopic/main libglib2.0-0 powerpc 2.41.0-1 [932 kB] Get:5 http://ftpmaster.internal/ubuntu/ utopic/main libpipeline1 powerpc 1.3.0-1 [22.0 kB] Get:6 http://ftpmaster.internal/ubuntu/ utopic/main libxau6 powerpc 1:1.0.8-1 [8284 B] Get:7 http://ftpmaster.internal/ubuntu/ utopic/main libxdmcp6 powerpc 1:1.1.1-1 [12.6 kB] Get:8 http://ftpmaster.internal/ubuntu/ utopic/main libxcb1 powerpc 1.10-2ubuntu1 [34.5 kB] Get:9 http://ftpmaster.internal/ubuntu/ utopic/main libx11-data all 2:1.6.2-1ubuntu2 [111 kB] Get:10 http://ftpmaster.internal/ubuntu/ utopic/main libx11-6 powerpc 2:1.6.2-1ubuntu2 [516 kB] Get:11 http://ftpmaster.internal/ubuntu/ utopic/main libxext6 powerpc 2:1.3.2-1 [31.8 kB] Get:12 http://ftpmaster.internal/ubuntu/ utopic/main libxml2 powerpc 2.9.1+dfsg1-3ubuntu5 [478 kB] Get:13 http://ftpmaster.internal/ubuntu/ utopic/main groff-base powerpc 1.22.2-5 [1101 kB] Get:14 http://ftpmaster.internal/ubuntu/ utopic/main bsdmainutils powerpc 9.0.5ubuntu1 [202 kB] Get:15 http://ftpmaster.internal/ubuntu/ utopic/main man-db powerpc 2.6.7.1-1 [833 kB] Get:16 http://ftpmaster.internal/ubuntu/ utopic/main fonts-dejavu-core all 2.34-1ubuntu1 [1024 kB] Get:17 http://ftpmaster.internal/ubuntu/ utopic/main ucf all 3.0030 [55.5 kB] Get:18 http://ftpmaster.internal/ubuntu/ utopic/main fontconfig-config all 2.11.0-0ubuntu5 [47.6 kB] Get:19 http://ftpmaster.internal/ubuntu/ utopic/main libfreetype6 powerpc 2.5.2-1ubuntu4 [267 kB] Get:20 http://ftpmaster.internal/ubuntu/ utopic/main libfontconfig1 powerpc 2.11.0-0ubuntu5 [116 kB] Get:21 http://ftpmaster.internal/ubuntu/ utopic/main libpixman-1-0 powerpc 0.32.4-1ubuntu1 [143 kB] Get:22 http://ftpmaster.internal/ubuntu/ utopic/main libxcb-render0 powerpc 1.10-2ubuntu1 [10.3 kB] Get:23 http://ftpmaster.internal/ubuntu/ utopic/main libxcb-shm0 powerpc 1.10-2ubuntu1 [5308 B] Get:24 http://ftpmaster.internal/ubuntu/ utopic/main libxrender1 powerpc 1:0.9.8-1 [20.1 kB] Get:25 http://ftpmaster.internal/ubuntu/ utopic/main libcairo2 powerpc 1.13.0~20140204-0ubuntu1 [486 kB] Get:26 http://ftpmaster.internal/ubuntu/ utopic/main libcroco3 powerpc 0.6.8-2ubuntu1 [70.1 kB] Get:27 http://ftpmaster.internal/ubuntu/ utopic/main libdatrie1 powerpc 0.2.8-1 [15.3 kB] Get:28 http://ftpmaster.internal/ubuntu/ utopic/main libgfortran3 powerpc 4.9.0-5ubuntu2 [189 kB] Get:29 http://ftpmaster.internal/ubuntu/ utopic/main libgraphite2-3 powerpc 1.2.4-1ubuntu1 [49.0 kB] Get:30 http://ftpmaster.internal/ubuntu/ utopic/main libharfbuzz0b powerpc 0.9.28-2 [113 kB] Get:31 http://ftpmaster.internal/ubuntu/ utopic/main x11-common all 1:7.7+1ubuntu8 [49.8 kB] Get:32 http://ftpmaster.internal/ubuntu/ utopic/main libice6 powerpc 2:1.0.8-2 [43.9 kB] Get:33 http://ftpmaster.internal/ubuntu/ utopic/main libjpeg-turbo8 powerpc 1.3.0-0ubuntu2 [85.3 kB] Get:34 http://ftpmaster.internal/ubuntu/ utopic/main libthai-data all 0.1.20-3 [130 kB] Get:35 http://ftpmaster.internal/ubuntu/ utopic/main libthai0 powerpc 0.1.20-3 [15.8 kB] Get:36 http://ftpmaster.internal/ubuntu/ utopic/main fontconfig powerpc 2.11.0-0ubuntu5 [174 kB] Get:37 http://ftpmaster.internal/ubuntu/ utopic/main libpango-1.0-0 powerpc 1.36.3-1ubuntu1 [139 kB] Get:38 http://ftpmaster.internal/ubuntu/ utopic/main libpangoft2-1.0-0 powerpc 1.36.3-1ubuntu1 [29.9 kB] Get:39 http://ftpmaster.internal/ubuntu/ utopic/main libpangocairo-1.0-0 powerpc 1.36.3-1ubuntu1 [19.0 kB] Get:40 http://ftpmaster.internal/ubuntu/ utopic/main libpaper1 powerpc 1.1.24+nmu2ubuntu3 [13.1 kB] Get:41 http://ftpmaster.internal/ubuntu/ utopic/main libpcrecpp0 powerpc 1:8.31-5ubuntu1 [15.1 kB] Get:42 http://ftpmaster.internal/ubuntu/ utopic/main libsigsegv2 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libpython2.7-minimal powerpc 2.7.7-2 [308 kB] Get:54 http://ftpmaster.internal/ubuntu/ utopic/main python2.7-minimal powerpc 2.7.7-2 [1115 kB] Get:55 http://ftpmaster.internal/ubuntu/ utopic/main file powerpc 1:5.18-1ubuntu1 [19.9 kB] Get:56 http://ftpmaster.internal/ubuntu/ utopic/main mime-support all 3.55ubuntu1 [31.1 kB] Get:57 http://ftpmaster.internal/ubuntu/ utopic/main netbase all 5.2 [12.9 kB] Get:58 http://ftpmaster.internal/ubuntu/ utopic/main gettext-base powerpc 0.18.3.2-1ubuntu1 [45.0 kB] Get:59 http://ftpmaster.internal/ubuntu/ utopic/main m4 powerpc 1.4.17-4 [183 kB] Get:60 http://ftpmaster.internal/ubuntu/ utopic/main autoconf all 2.69-6 [322 kB] Get:61 http://ftpmaster.internal/ubuntu/ utopic/main autotools-dev all 20140510.1 [39.7 kB] Get:62 http://ftpmaster.internal/ubuntu/ utopic/main automake all 1:1.14.1-2ubuntu1 [510 kB] Get:63 http://ftpmaster.internal/ubuntu/ utopic/main gettext powerpc 0.18.3.2-1ubuntu1 [781 kB] Get:64 http://ftpmaster.internal/ubuntu/ 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Get:116 http://ftpmaster.internal/ubuntu/ utopic/main unzip powerpc 6.0-12ubuntu1 [149 kB] Get:117 http://ftpmaster.internal/ubuntu/ utopic/main xdg-utils all 1.1.0~rc1-2ubuntu7 [65.6 kB] Get:118 http://ftpmaster.internal/ubuntu/ utopic/universe r-base-core powerpc 3.1.0-1 [19.3 MB] Get:119 http://ftpmaster.internal/ubuntu/ utopic/main liblzma-dev powerpc 5.1.1alpha+20120614-2ubuntu2 [137 kB] Get:120 http://ftpmaster.internal/ubuntu/ utopic/universe r-base-dev all 3.1.0-1 [4078 B] Get:121 http://ftpmaster.internal/ubuntu/ utopic/universe r-cran-lattice powerpc 0.20-29-1 [701 kB] Get:122 http://ftpmaster.internal/ubuntu/ utopic/universe r-cran-nlme powerpc 3.1.117-1 [1993 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 49.2 MB in 6s (7867 kB/s) Selecting previously unselected package libexpat1:powerpc. 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Selecting previously unselected package r-cran-nlme. Preparing to unpack .../r-cran-nlme_3.1.117-1_powerpc.deb ... Unpacking r-cran-nlme (3.1.117-1) ... Setting up libexpat1:powerpc (2.1.0-5ubuntu1) ... Setting up libmagic1:powerpc (1:5.18-1ubuntu1) ... Setting up libasprintf0c2:powerpc (0.18.3.2-1ubuntu1) ... Setting up libglib2.0-0:powerpc (2.41.0-1) ... No schema files found: doing nothing. Setting up libpipeline1:powerpc (1.3.0-1) ... Setting up libxau6:powerpc (1:1.0.8-1) ... Setting up libxdmcp6:powerpc (1:1.1.1-1) ... Setting up libxcb1:powerpc (1.10-2ubuntu1) ... Setting up libx11-data (2:1.6.2-1ubuntu2) ... Setting up libx11-6:powerpc (2:1.6.2-1ubuntu2) ... Setting up libxext6:powerpc (2:1.3.2-1) ... Setting up libxml2:powerpc (2.9.1+dfsg1-3ubuntu5) ... Setting up groff-base (1.22.2-5) ... Setting up bsdmainutils (9.0.5ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.6.7.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up fonts-dejavu-core (2.34-1ubuntu1) ... Setting up ucf (3.0030) ... Setting up fontconfig-config (2.11.0-0ubuntu5) ... Setting up libfreetype6:powerpc (2.5.2-1ubuntu4) ... Setting up libfontconfig1:powerpc (2.11.0-0ubuntu5) ... Setting up libpixman-1-0:powerpc (0.32.4-1ubuntu1) ... Setting up libxcb-render0:powerpc (1.10-2ubuntu1) ... Setting up libxcb-shm0:powerpc (1.10-2ubuntu1) ... Setting up libxrender1:powerpc (1:0.9.8-1) ... Setting up libcairo2:powerpc (1.13.0~20140204-0ubuntu1) ... Setting up libcroco3:powerpc (0.6.8-2ubuntu1) ... Setting up libdatrie1:powerpc (0.2.8-1) ... Setting up libgfortran3:powerpc (4.9.0-5ubuntu2) ... Setting up libgraphite2-3:powerpc (1.2.4-1ubuntu1) ... Setting up libharfbuzz0b:powerpc (0.9.28-2) ... Setting up x11-common (1:7.7+1ubuntu8) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6:powerpc (2:1.0.8-2) ... Setting up libjpeg-turbo8:powerpc (1.3.0-0ubuntu2) ... Setting up libthai-data (0.1.20-3) ... Setting up libthai0:powerpc (0.1.20-3) ... Setting up fontconfig (2.11.0-0ubuntu5) ... Regenerating fonts cache... done. Setting up libpango-1.0-0:powerpc (1.36.3-1ubuntu1) ... Setting up libpangoft2-1.0-0:powerpc (1.36.3-1ubuntu1) ... Setting up libpangocairo-1.0-0:powerpc (1.36.3-1ubuntu1) ... Setting up libpaper1:powerpc (1.1.24+nmu2ubuntu3) ... Creating config file /etc/papersize with new version Setting up libpcrecpp0:powerpc (1:8.31-5ubuntu1) ... Setting up libsigsegv2:powerpc (2.10-4) ... Setting up libsm6:powerpc (2:1.2.1-2) ... Setting up libtcl8.5:powerpc (8.5.15-2ubuntu1) ... Setting up libjbig0:powerpc (2.0-2ubuntu4.1) ... Setting up libjpeg8:powerpc (8c-2ubuntu8) ... Setting up libtiff5:powerpc (4.0.3-8ubuntu1) ... Setting up libxft2:powerpc (2.3.1-2) ... Setting up libxss1:powerpc (1:1.2.2-1) ... Setting up libtk8.5:powerpc (8.5.15-2ubuntu3) ... Setting up libunistring0:powerpc (0.9.3-5ubuntu3) ... Setting up libxt6:powerpc (1:1.1.4-1) ... Setting up libpython2.7-minimal:powerpc (2.7.7-2) ... Setting up python2.7-minimal (2.7.7-2) ... Linking and byte-compiling packages for runtime python2.7... Setting up file (1:5.18-1ubuntu1) ... Setting up mime-support (3.55ubuntu1) ... Setting up netbase (5.2) ... Setting up gettext-base (0.18.3.2-1ubuntu1) ... Setting up m4 (1.4.17-4) ... Setting up autoconf (2.69-6) ... Setting up autotools-dev (20140510.1) ... Setting up automake (1:1.14.1-2ubuntu1) ... update-alternatives: using /usr/bin/automake-1.14 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.18.3.2-1ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up dh-apparmor (2.8.95~2430-0ubuntu5) ... Setting up debhelper (9.20140228ubuntu6) ... Setting up liburi-perl (1.60-1) ... Setting up libencode-locale-perl (1.03-1) ... Setting up libhttp-date-perl (6.02-1) ... Setting up libfile-listing-perl (6.04-1) ... Setting up libhtml-tagset-perl (3.20-2) ... Setting up libhtml-parser-perl (3.71-1build1) ... Setting up libhtml-tree-perl (5.03-1) ... Setting up libio-html-perl (1.00-1) ... Setting up liblwp-mediatypes-perl (6.02-1) ... Setting up libhttp-message-perl (6.06-1) ... Setting up libhttp-cookies-perl (6.00-2) ... Setting up libhttp-negotiate-perl (6.00-2) ... Setting up libnet-ssleay-perl (1.63-1) ... Setting up libio-socket-ssl-perl (1.965-1ubuntu1) ... Setting up libnet-http-perl (6.06-1) ... Setting up libwww-robotrules-perl (6.01-1) ... Setting up libpython2.7-stdlib:powerpc (2.7.7-2) ... Setting up python2.7 (2.7.7-2) ... Setting up python-minimal (2.7.6-2) ... Setting up libpython-stdlib:powerpc (2.7.6-2) ... Setting up python (2.7.6-2) ... Setting up python-scour (0.26-3build1) ... Setting up libgfortran-4.8-dev:powerpc (4.8.3-2ubuntu1) ... Setting up gfortran-4.8 (4.8.3-2ubuntu1) ... Setting up gfortran (4:4.8.2-4ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode Setting up libblas3 (1.2.20110419-7) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up libblas-dev (1.2.20110419-7) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up libbz2-dev:powerpc (1.0.6-5) ... Setting up libjpeg-turbo8-dev:powerpc (1.3.0-0ubuntu2) ... Setting up libjpeg8-dev:powerpc (8c-2ubuntu8) ... Setting up libjpeg-dev:powerpc (8c-2ubuntu8) ... Setting up liblapack3 (3.5.0-2ubuntu1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up liblapack-dev (3.5.0-2ubuntu1) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libtinfo-dev:powerpc (5.9+20140118-1ubuntu1) ... Setting up libncurses5-dev:powerpc (5.9+20140118-1ubuntu1) ... Setting up libpaper-utils (1.1.24+nmu2ubuntu3) ... Setting up libpcre3-dev:powerpc (1:8.31-5ubuntu1) ... Setting up zlib1g-dev:powerpc (1:1.2.8.dfsg-1ubuntu1) ... Setting up libpng12-dev (1.2.50-1ubuntu2) ... Setting up libreadline6-dev:powerpc (6.3-4ubuntu2) ... Setting up libreadline-dev:powerpc (6.3-4ubuntu2) ... Setting up zip (3.0-8) ... Setting up unzip (6.0-12ubuntu1) ... Setting up xdg-utils (1.1.0~rc1-2ubuntu7) ... Setting up r-base-core (3.1.0-1) ... Creating config file /etc/R/Renviron with new version Setting up liblzma-dev:powerpc (5.1.1alpha+20120614-2ubuntu2) ... Setting up r-cran-lattice (0.20-29-1) ... Setting up r-cran-nlme (3.1.117-1) ... Setting up liblwp-protocol-https-perl (6.04-3) ... Setting up libwww-perl (6.06-1) ... Setting up libxml-parser-perl (2.41-1build3) ... Setting up intltool (0.50.2-2) ... Setting up dh-translations (121) ... Setting up cdbs (0.4.122ubuntu2) ... Setting up r-base-dev (3.1.0-1) ... Processing triggers for libc-bin (2.19-0ubuntu6) ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.19-0ubuntu6 make_4.0-7 dpkg-dev_1.17.9ubuntu1 gcc-4.8_4.8.3-2ubuntu1 g++-4.8_4.8.3-2ubuntu1 binutils_2.24.51.20140604-1ubuntu2 libstdc++-4.8-dev_4.8.3-2ubuntu1 libstdc++6_4.9.0-5ubuntu2 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::Quilt gpgv: Signature made Thu Jun 5 16:12:44 2014 UTC using RSA key ID D1C646D1 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./r-cran-ape_3.1-2-1.dsc dpkg-source: info: extracting r-cran-ape in r-cran-ape-3.1-2 dpkg-source: info: unpacking r-cran-ape_3.1-2.orig.tar.gz dpkg-source: info: unpacking r-cran-ape_3.1-2-1.debian.tar.xz dpkg-buildpackage: source package r-cran-ape dpkg-buildpackage: source version 3.1-2-1 dpkg-buildpackage: source distribution unstable dpkg-source --before-build r-cran-ape-3.1-2 dpkg-buildpackage: host architecture powerpc /usr/bin/fakeroot debian/rules clean test -x debian/rules dh_clean if test -d src; then \ find src -regex ".*\.o" | \ xargs --no-run-if-empty -r rm; \ fi rm -f config.log config.status debian/rules build-arch test -x debian/rules mkdir -p "." /usr/bin/fakeroot debian/rules binary-arch test -x debian/rules dh_testroot dh_prep dh_installdirs -A mkdir -p "." dh_installdirs usr/lib/R/site-library echo "R:Depends=r-base-core (>= 3.1.0-1)" >> debian/r-cran-ape.substvars if test -f /usr/bin/xvfb-run; then \ xvfb-run -a \ R CMD INSTALL -l /build/buildd/r-cran-ape-3.1-2/debian/r-cran-ape/usr/lib/R/site-library --clean \ . ; \ else \ R CMD INSTALL -l /build/buildd/r-cran-ape-3.1-2/debian/r-cran-ape/usr/lib/R/site-library \ --clean . ;\ fi * installing *source* package 'ape' ... ** package 'ape' successfully unpacked and MD5 sums checked ** libs make[1]: Entering directory '/build/buildd/r-cran-ape-3.1-2/src' gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c BIONJ.c -o BIONJ.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c NNI.c -o NNI.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c SPR.c -o SPR.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c TBR.c -o TBR.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c additive.c -o additive.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c ape.c -o ape.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bNNI.c -o bNNI.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bionjs.c -o bionjs.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bipartition.c -o bipartition.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bitsplits.c -o bitsplits.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c delta_plot.c -o delta_plot.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c dist_dna.c -o dist_dna.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c dist_nodes.c -o dist_nodes.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c ewLasso.c -o ewLasso.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c heap.c -o heap.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c mat_expo.c -o mat_expo.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c me.c -o me.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c me_balanced.c -o me_balanced.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c me_ols.c -o me_ols.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c mvr.c -o mvr.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c mvrs.c -o mvrs.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c nj.c -o nj.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c njs.c -o njs.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c pic.c -o pic.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c plot_phylo.c -o plot_phylo.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c rTrait.c -o rTrait.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c read_dna.c -o read_dna.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c reorder_phylo.c -o reorder_phylo.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c treePop.c -o treePop.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c tree_build.c -o tree_build.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c tree_phylo.c -o tree_phylo.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c triangMtd.c -o triangMtd.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c triangMtds.c -o triangMtds.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c ultrametric.c -o ultrametric.o gcc -std=gnu99 -shared -Wl,-Bsymbolic-functions -Wl,-z,relro -o ape.so BIONJ.o NNI.o SPR.o TBR.o additive.o ape.o bNNI.o bionjs.o bipartition.o bitsplits.o delta_plot.o dist_dna.o dist_nodes.o ewLasso.o heap.o mat_expo.o me.o me_balanced.o me_ols.o mvr.o mvrs.o nj.o njs.o pic.o plot_phylo.o rTrait.o read_dna.o reorder_phylo.o treePop.o tree_build.o tree_phylo.o triangMtd.o triangMtds.o ultrametric.o -llapack -lblas -lgfortran -lm -L/usr/lib/R/lib -lR make[1]: Leaving directory '/build/buildd/r-cran-ape-3.1-2/src' make[1]: Entering directory '/build/buildd/r-cran-ape-3.1-2/src' make[1]: Leaving directory '/build/buildd/r-cran-ape-3.1-2/src' installing to /build/buildd/r-cran-ape-3.1-2/debian/r-cran-ape/usr/lib/R/site-library/ape/libs ** R ** data ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (ape) rm -vf /build/buildd/r-cran-ape-3.1-2/debian/r-cran-ape/usr/lib/R/site-library/R.css \ /build/buildd/r-cran-ape-3.1-2/debian/r-cran-ape/usr/lib/R/site-library/ape/COPYING \ /build/buildd/r-cran-ape-3.1-2/debian/r-cran-ape/usr/lib/R/site-library/ape/LICENSE.txt if test -f debian/overrides; then \ install -d /build/buildd/r-cran-ape-3.1-2/debian/r-cran-ape/usr/share/lintian/overrides ; \ install -m 0644 debian/overrides \ /build/buildd/r-cran-ape-3.1-2/debian/r-cran-ape/usr/share/lintian/overrides/r-cran-ape; \ fi Adding cdbs dependencies to debian/r-cran-ape.substvars dh_installdirs -pr-cran-ape dh_installdocs -pr-cran-ape ./NEWS dh_installexamples -pr-cran-ape dh_installman -pr-cran-ape dh_installinfo -pr-cran-ape dh_installmenu -pr-cran-ape dh_installcron -pr-cran-ape dh_installinit -pr-cran-ape dh_installdebconf -pr-cran-ape dh_installemacsen -pr-cran-ape dh_installcatalogs -pr-cran-ape dh_installpam -pr-cran-ape dh_installlogrotate -pr-cran-ape dh_installlogcheck -pr-cran-ape dh_installchangelogs -pr-cran-ape dh_installudev -pr-cran-ape dh_lintian -pr-cran-ape dh_bugfiles -pr-cran-ape dh_install -pr-cran-ape dh_link -pr-cran-ape dh_installmime -pr-cran-ape dh_installgsettings -pr-cran-ape dh_strip -pr-cran-ape dh_strip debug symbol extraction: not enabling -a because /CurrentlyBuilding exists dh_strip debug symbol extraction: all non-arch-all packages for this build platform powerpc: r-cran-ape dh_strip debug symbol extraction: packages to act on: r-cran-ape dh_strip debug symbol extraction: ignored packages: Using buildid for compat level >= 9 dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package r-cran-ape: unused substitution variable ${R:Depends} /usr/bin/pkg_create_dbgsym: building ddeb package dpkg-deb: building package `r-cran-ape-dbgsym' in `../r-cran-ape-dbgsym_3.1-2-1_powerpc.ddeb'. dh_compress -pr-cran-ape dh_fixperms -pr-cran-ape dh_makeshlibs -pr-cran-ape dh_installdeb -pr-cran-ape dh_perl -pr-cran-ape dh_shlibdeps -pr-cran-ape dh_gencontrol -pr-cran-ape dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe # only call dh_scour for packages in main if grep -q '^Component:[[:space:]]*main' /CurrentlyBuilding 2>/dev/null; then dh_scour -pr-cran-ape ; fi dh_md5sums -pr-cran-ape dh_builddeb -pr-cran-ape INFO: pkgstriptranslations version 121 pkgstriptranslations: processing r-cran-ape (in debian/r-cran-ape); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/r-cran-ape/DEBIAN/control, package r-cran-ape, directory debian/r-cran-ape pkgstripfiles: PNG optimization for package r-cran-ape took 0 s dpkg-deb: warning: 'debian/r-cran-ape/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `r-cran-ape' in `../r-cran-ape_3.1-2-1_powerpc.deb'. dpkg-genchanges -B -mUbuntu/powerpc Build Daemon >../r-cran-ape_3.1-2-1_powerpc.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build r-cran-ape-3.1-2 dpkg-buildpackage: binary-only upload (no source included) ****************************************************************************** Build finished at 20140605-2346 Publishing debug debs. chroot-autobuild/build/buildd/r-cran-ape_3.1-2-1_powerpc.deb: new debian package, version 2.0. size 1273630 bytes: control archive= 2585 bytes. 1492 bytes, 26 lines control 3682 bytes, 48 lines md5sums Package: r-cran-ape Version: 3.1-2-1 Architecture: powerpc Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1581 Depends: libc6 (>= 2.4), liblapack3 | liblapack.so.3, r-base-core (>= 3.1.0-1), r-cran-nlme, r-cran-lattice Suggests: phyml, clustalw, t-coffee, muscle, r-cran-expm Section: gnu-r Priority: optional Homepage: http://cran.r-project.org/web/packages/ape/index.html Description: GNU R package for Analyses of Phylogenetics and Evolution This package provides functions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from allelic and nucleotide data, reading and writing nucleotide sequences, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R. chroot-autobuild/build/buildd/r-cran-ape_3.1-2-1_powerpc.deb: drwxr-xr-x root/root 0 2014-06-05 23:46 ./ drwxr-xr-x root/root 0 2014-06-05 23:46 ./usr/ drwxr-xr-x root/root 0 2014-06-05 23:45 ./usr/lib/ drwxr-xr-x root/root 0 2014-06-05 23:45 ./usr/lib/R/ drwxr-xr-x root/root 0 2014-06-05 23:46 ./usr/lib/R/site-library/ drwxr-xr-x root/root 0 2014-06-05 23:46 ./usr/lib/R/site-library/ape/ -rw-r--r-- root/root 3501 2014-06-05 23:45 ./usr/lib/R/site-library/ape/NAMESPACE -rw-r--r-- root/root 90946 2014-06-05 23:45 ./usr/lib/R/site-library/ape/NEWS -rw-r--r-- root/root 2807 2014-06-05 23:45 ./usr/lib/R/site-library/ape/DESCRIPTION drwxr-xr-x root/root 0 2014-06-05 23:46 ./usr/lib/R/site-library/ape/Meta/ -rw-r--r-- root/root 1674 2014-06-05 23:45 ./usr/lib/R/site-library/ape/Meta/package.rds -rw-r--r-- root/root 7178 2014-06-05 23:46 ./usr/lib/R/site-library/ape/Meta/Rd.rds 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2014-06-05 23:46 ./usr/lib/R/site-library/ape/INDEX drwxr-xr-x root/root 0 2014-06-05 23:46 ./usr/share/ drwxr-xr-x root/root 0 2014-06-05 23:46 ./usr/share/doc/ drwxr-xr-x root/root 0 2014-06-05 23:46 ./usr/share/doc/r-cran-ape/ -rw-r--r-- root/root 1512 2014-06-05 16:10 ./usr/share/doc/r-cran-ape/copyright -rw-r--r-- root/root 26578 2014-05-27 09:31 ./usr/share/doc/r-cran-ape/NEWS.gz -rw-r--r-- root/root 238 2014-06-05 16:10 ./usr/share/doc/r-cran-ape/changelog.Debian.gz r-cran-ape_3.1-2-1_powerpc.changes: Format: 1.8 Date: Tue, 27 May 2014 19:05:11 +0200 Source: r-cran-ape Binary: r-cran-ape Architecture: powerpc Version: 3.1-2-1 Distribution: utopic-proposed Urgency: low Maintainer: Ubuntu/powerpc Build Daemon Changed-By: Dylan Aïssi Description: r-cran-ape - GNU R package for Analyses of Phylogenetics and Evolution Changes: r-cran-ape (3.1-2-1) unstable; urgency=low . * New upstream release. * Add debian/control Suggests field. Checksums-Sha1: 58d7c156ee230af87b84525b7547ebcd40c1eb19 1273630 r-cran-ape_3.1-2-1_powerpc.deb Checksums-Sha256: 3178e11df6ffebae23c083288f4505a5e39676c6c716125c3568a86029732b11 1273630 r-cran-ape_3.1-2-1_powerpc.deb Files: 276ae9db0872640f9493fb0ec979db44 1273630 gnu-r optional r-cran-ape_3.1-2-1_powerpc.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20140605-2346 Build needed 00:00:56, 5556k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-6074517'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-6074517/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-6074517'] Unmounting chroot for build PACKAGEBUILD-6074517... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-6074517'] Removing build PACKAGEBUILD-6074517