RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux z13-014 4.3.0-0-generic #9 SMP Tue Dec 1 18:12:15 CET 2015 s390x Buildd toolchain package versions: launchpad-buildd_136 python-lpbuildd_136 sbuild_0.66.0-5ubuntu1 dpkg-dev_1.18.3ubuntu1 python-debian_0.1.27ubuntu1. Syncing the system clock with the buildd NTP service... 5 Dec 12:55:51 ntpdate[56390]: adjust time server 10.211.37.1 offset 0.000646 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-8381149', '/home/buildd/filecache-default/8808aeb45a9438550e8005f67e1dc6d720c06f47'] Unpacking chroot for build PACKAGEBUILD-8381149 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-8381149'] Mounting chroot for build PACKAGEBUILD-8381149 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-8381149', 'deb http://ftpmaster.internal/ubuntu xenial main universe'] Overriding sources.list in build-PACKAGEBUILD-8381149 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-8381149', 's390x'] Updating debian chroot for build PACKAGEBUILD-8381149 Get:1 http://ftpmaster.internal xenial InRelease [227 kB] Ign http://archive-team.internal xenial InRelease Ign http://archive-team.internal xenial Release.gpg Hit http://archive-team.internal xenial Release Ign http://archive-team.internal xenial/main s390x Packages/DiffIndex Hit http://archive-team.internal xenial/main Translation-en Get:2 http://ftpmaster.internal xenial/main s390x Packages [1299 kB] Hit http://archive-team.internal xenial/main s390x Packages Get:3 http://ftpmaster.internal xenial/universe s390x Packages [5566 kB] Get:4 http://ftpmaster.internal xenial/main Translation-en [847 kB] Get:5 http://ftpmaster.internal xenial/universe Translation-en [4728 kB] Fetched 12.7 MB in 6s (1911 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-8381149', 's390x', 'xenial', '-c', 'chroot:autobuild', '--arch=s390x', '--dist=xenial', '--purge=never', '--nolog', 'r-cran-igraph_0.7.1-1.dsc'] Initiating build PACKAGEBUILD-8381149 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.3.0-0-generic #9 SMP Tue Dec 1 18:12:15 CET 2015 s390x sbuild (Debian sbuild) 0.66.0 (04 Oct 2015) on z13-014.buildd +==============================================================================+ | r-cran-igraph 0.7.1-1 (s390x) 05 Dec 2015 12:56 | +==============================================================================+ Package: r-cran-igraph Version: 0.7.1-1 Source Version: 0.7.1-1 Distribution: xenial Machine Architecture: s390x Host Architecture: s390x Build Architecture: s390x I: NOTICE: Log filtering will replace 'build/r-cran-igraph-z01jtj/r-cran-igraph-0.7.1' with '<>' I: NOTICE: Log filtering will replace 'build/r-cran-igraph-z01jtj' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-8381149/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- r-cran-igraph_0.7.1-1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-xIwv8b/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign file: ./ InRelease Ign file: ./ Release.gpg Get:1 file: ./ Release [2119 B] Ign file: ./ Translation-en Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/772 B of archives. After this operation, 0 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! sbuild-build-depends-core-dummy debconf: delaying package configuration, since apt-utils is not installed Authentication warning overridden. Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11407 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 9), cdbs, r-base-dev, r-cran-matrix Filtered Build-Depends: debhelper (>= 9), cdbs, r-base-dev, r-cran-matrix dpkg-deb: building package 'sbuild-build-depends-r-cran-igraph-dummy' in '/<>/resolver-7b4MvJ/apt_archive/sbuild-build-depends-r-cran-igraph-dummy.deb'. Ign file: ./ InRelease Ign file: ./ Release.gpg Get:1 file: ./ Release [2119 B] Ign file: ./ Translation-en Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install r-cran-igraph build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf automake autotools-dev bsdmainutils cdbs debhelper dh-strip-nondeterminism dh-translations file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-5 groff-base intltool intltool-debian libarchive-zip-perl libasprintf0v5 libblas-common libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libcurl3 libdatrie1 libencode-locale-perl libexpat1 libfile-listing-perl libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran-5-dev libgfortran3 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libice6 libicu55 libio-html-perl libio-socket-ssl-perl libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblwp-mediatypes-perl liblwp-protocol-https-perl liblzma-dev libmagic1 libncurses5-dev libnet-http-perl libnet-ssleay-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng12-dev libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libreadline-dev libreadline6-dev libsigsegv2 libsm6 libtcl8.6 libthai-data libthai0 libtiff5 libtimedate-perl libtinfo-dev libtk8.6 libunistring0 liburi-perl libwww-perl libwww-robotrules-perl libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl libxml2 libxrender1 libxss1 libxt6 m4 man-db mime-support netbase po-debconf python python-minimal python-scour python2.7 python2.7-minimal r-base-core r-base-dev r-cran-lattice r-cran-matrix ucf unzip x11-common xdg-utils zip zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc libtool wamerican wordlist whois vacation devscripts dh-make gettext-doc gfortran-multilib gfortran-doc gfortran-5-multilib gfortran-5-doc libgfortran3-dbg groff libdata-dump-perl libcrypt-ssleay-perl liblzma-doc ncurses-doc readline-doc tcl8.6 tk8.6 libauthen-ntlm-perl less www-browser libmail-box-perl python-doc python-tk python-rsvg python-cairo python2.7-doc binfmt-support r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo gvfs-bin Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev bzip2-doc libglib2.0-data shared-mime-info xdg-user-dirs libhtml-format-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl xml-core ifupdown libmail-sendmail-perl r-recommended r-doc-html libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autotools-dev bsdmainutils cdbs debhelper dh-strip-nondeterminism dh-translations file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-5 groff-base intltool intltool-debian libarchive-zip-perl libasprintf0v5 libblas-common libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libcurl3 libdatrie1 libencode-locale-perl libexpat1 libfile-listing-perl libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran-5-dev libgfortran3 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libice6 libicu55 libio-html-perl libio-socket-ssl-perl libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblwp-mediatypes-perl liblwp-protocol-https-perl liblzma-dev libmagic1 libncurses5-dev libnet-http-perl libnet-ssleay-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng12-dev libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libreadline-dev libreadline6-dev libsigsegv2 libsm6 libtcl8.6 libthai-data libthai0 libtiff5 libtimedate-perl libtinfo-dev libtk8.6 libunistring0 liburi-perl libwww-perl libwww-robotrules-perl libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl libxml2 libxrender1 libxss1 libxt6 m4 man-db mime-support netbase po-debconf python python-minimal python-scour python2.7 python2.7-minimal r-base-core r-base-dev r-cran-lattice r-cran-matrix sbuild-build-depends-r-cran-igraph-dummy ucf unzip x11-common xdg-utils zip zlib1g-dev 0 upgraded, 131 newly installed, 0 to remove and 0 not upgraded. Need to get 79.1 MB/79.1 MB of archives. After this operation, 291 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libasprintf0v5 groff-base libpython2.7-minimal python-minimal libpython2.7-stdlib python2.7 libpython-stdlib python file libx11-data libfile-stripnondeterminism-perl dh-strip-nondeterminism libhtml-parser-perl libnet-ssleay-perl libxml-parser-perl libgfortran3 libgfortran-5-dev gfortran-5 libblas-common libblas3 x11-common libjpeg8 libjpeg8-dev libjpeg-dev liblapack3 libncurses5-dev libthai-data libpaper-utils libpcre3-dev libreadline-dev libtcl8.6 libtk8.6 sbuild-build-depends-r-cran-igraph-dummy Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ xenial/main libasprintf0v5 s390x 0.19.4-1ubuntu3 [6638 B] Get:2 http://ftpmaster.internal/ubuntu/ xenial/main groff-base s390x 1.22.3-4 [1199 kB] Get:3 http://ftpmaster.internal/ubuntu/ xenial/main bsdmainutils s390x 9.0.6ubuntu1 [178 kB] Get:4 http://ftpmaster.internal/ubuntu/ xenial/main libpipeline1 s390x 1.4.1-1 [24.7 kB] Get:5 http://ftpmaster.internal/ubuntu/ xenial/main man-db s390x 2.7.5-1 [850 kB] Get:6 http://ftpmaster.internal/ubuntu/ xenial/main fonts-dejavu-core all 2.35-1 [1039 kB] Get:7 http://ftpmaster.internal/ubuntu/ xenial/main ucf all 3.0031 [52.7 kB] Get:8 http://ftpmaster.internal/ubuntu/ xenial/main fontconfig-config all 2.11.1-0ubuntu6 [48.7 kB] Get:9 http://ftpmaster.internal/ubuntu/ xenial/main libexpat1 s390x 2.1.0-7 [65.4 kB] Get:10 http://ftpmaster.internal/ubuntu/ xenial/main libfreetype6 s390x 2.5.2-4ubuntu2 [300 kB] Get:11 http://ftpmaster.internal/ubuntu/ xenial/main libfontconfig1 s390x 2.11.1-0ubuntu6 [125 kB] Get:12 http://ftpmaster.internal/ubuntu/ xenial/main fontconfig s390x 2.11.1-0ubuntu6 [176 kB] Get:13 http://ftpmaster.internal/ubuntu/ xenial/main libjpeg-turbo8 s390x 1.3.0-0ubuntu2 [97.3 kB] Get:14 http://ftpmaster.internal/ubuntu/ xenial/main libpcrecpp0v5 s390x 2:8.35-7.1ubuntu1 [14.6 kB] Get:15 http://ftpmaster.internal/ubuntu/ xenial/main libpython2.7-minimal s390x 2.7.10-4ubuntu2 [337 kB] Get:16 http://ftpmaster.internal/ubuntu/ xenial/main python2.7-minimal s390x 2.7.10-4ubuntu2 [1048 kB] Get:17 http://ftpmaster.internal/ubuntu/ xenial/main python-minimal s390x 2.7.9-1 [28.2 kB] Get:18 http://ftpmaster.internal/ubuntu/ xenial/main mime-support all 3.59ubuntu1 [31.0 kB] Get:19 http://ftpmaster.internal/ubuntu/ xenial/main libpython2.7-stdlib s390x 2.7.10-4ubuntu2 [1761 kB] Get:20 http://ftpmaster.internal/ubuntu/ xenial/main python2.7 s390x 2.7.10-4ubuntu2 [210 kB] Get:21 http://ftpmaster.internal/ubuntu/ xenial/main libpython-stdlib s390x 2.7.9-1 [7720 B] Get:22 http://ftpmaster.internal/ubuntu/ xenial/main python s390x 2.7.9-1 [137 kB] Get:23 http://ftpmaster.internal/ubuntu/ xenial/main libmagic1 s390x 1:5.25-2ubuntu1 [214 kB] Get:24 http://ftpmaster.internal/ubuntu/ xenial/main file s390x 1:5.25-2ubuntu1 [21.5 kB] Get:25 http://ftpmaster.internal/ubuntu/ xenial/main netbase all 5.3 [12.9 kB] Get:26 http://ftpmaster.internal/ubuntu/ xenial/main gettext-base s390x 0.19.4-1ubuntu3 [48.3 kB] Get:27 http://ftpmaster.internal/ubuntu/ xenial/main libglib2.0-0 s390x 2.47.3-3 [1041 kB] Get:28 http://ftpmaster.internal/ubuntu/ xenial/main libicu55 s390x 55.1-6ubuntu1 [7478 kB] Get:29 http://ftpmaster.internal/ubuntu/ xenial/main libxau6 s390x 1:1.0.8-1 [7420 B] Get:30 http://ftpmaster.internal/ubuntu/ xenial/main libxdmcp6 s390x 1:1.1.2-1.1 [11.0 kB] Get:31 http://ftpmaster.internal/ubuntu/ xenial/main libxcb1 s390x 1.11.1-1ubuntu1 [38.8 kB] Get:32 http://ftpmaster.internal/ubuntu/ xenial/main libx11-data all 2:1.6.3-1ubuntu2 [113 kB] Get:33 http://ftpmaster.internal/ubuntu/ xenial/main libx11-6 s390x 2:1.6.3-1ubuntu2 [544 kB] Get:34 http://ftpmaster.internal/ubuntu/ xenial/main libxext6 s390x 2:1.3.3-1 [27.8 kB] Get:35 http://ftpmaster.internal/ubuntu/ xenial/main libxml2 s390x 2.9.2+zdfsg1-4ubuntu1 [640 kB] Get:36 http://ftpmaster.internal/ubuntu/ xenial/main libsigsegv2 s390x 2.10-4 [13.4 kB] Get:37 http://ftpmaster.internal/ubuntu/ xenial/main m4 s390x 1.4.17-4 [192 kB] Get:38 http://ftpmaster.internal/ubuntu/ xenial/main autoconf all 2.69-9 [321 kB] Get:39 http://ftpmaster.internal/ubuntu/ xenial/main autotools-dev all 20150820.1 [39.8 kB] Get:40 http://ftpmaster.internal/ubuntu/ xenial/main automake all 1:1.15-1ubuntu1 [511 kB] Get:41 http://ftpmaster.internal/ubuntu/ xenial/main libcroco3 s390x 0.6.9-1 [77.2 kB] Get:42 http://ftpmaster.internal/ubuntu/ xenial/main libunistring0 s390x 0.9.3-5.2ubuntu1 [262 kB] Get:43 http://ftpmaster.internal/ubuntu/ xenial/main gettext s390x 0.19.4-1ubuntu3 [838 kB] Get:44 http://ftpmaster.internal/ubuntu/ xenial/main intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:45 http://ftpmaster.internal/ubuntu/ xenial/main po-debconf all 1.0.18 [234 kB] Get:46 http://ftpmaster.internal/ubuntu/ xenial/main libarchive-zip-perl all 1.53-1 [87.0 kB] Get:47 http://ftpmaster.internal/ubuntu/ xenial/main libfile-stripnondeterminism-perl all 0.014-1 [10.1 kB] Get:48 http://ftpmaster.internal/ubuntu/ xenial/main libtimedate-perl all 2.3000-2 [37.5 kB] Get:49 http://ftpmaster.internal/ubuntu/ xenial/main dh-strip-nondeterminism all 0.014-1 [5596 B] Get:50 http://ftpmaster.internal/ubuntu/ xenial/main debhelper all 9.20151126ubuntu1 [741 kB] Get:51 http://ftpmaster.internal/ubuntu/ xenial/main liburi-perl all 1.69-1 [84.5 kB] Get:52 http://ftpmaster.internal/ubuntu/ xenial/main libencode-locale-perl all 1.05-1 [12.3 kB] Get:53 http://ftpmaster.internal/ubuntu/ xenial/main libhttp-date-perl all 6.02-1 [10.4 kB] Get:54 http://ftpmaster.internal/ubuntu/ xenial/main libfile-listing-perl all 6.04-1 [9774 B] Get:55 http://ftpmaster.internal/ubuntu/ xenial/main libhtml-tagset-perl all 3.20-2 [13.5 kB] Get:56 http://ftpmaster.internal/ubuntu/ xenial/main libhtml-parser-perl s390x 3.71-2 [89.8 kB] Get:57 http://ftpmaster.internal/ubuntu/ xenial/main libhtml-tree-perl all 5.03-2 [197 kB] Get:58 http://ftpmaster.internal/ubuntu/ xenial/main libio-html-perl all 1.001-1 [14.9 kB] Get:59 http://ftpmaster.internal/ubuntu/ xenial/main liblwp-mediatypes-perl all 6.02-1 [21.7 kB] Get:60 http://ftpmaster.internal/ubuntu/ xenial/main libhttp-message-perl all 6.11-1 [74.3 kB] Get:61 http://ftpmaster.internal/ubuntu/ xenial/main libhttp-cookies-perl all 6.01-1 [17.2 kB] Get:62 http://ftpmaster.internal/ubuntu/ xenial/main libhttp-negotiate-perl all 6.00-2 [13.4 kB] Get:63 http://ftpmaster.internal/ubuntu/ xenial/main libnet-ssleay-perl s390x 1.72-1 [253 kB] Get:64 http://ftpmaster.internal/ubuntu/ xenial/main libio-socket-ssl-perl all 2.021-1 [161 kB] Get:65 http://ftpmaster.internal/ubuntu/ xenial/main libnet-http-perl all 6.09-1 [24.0 kB] Get:66 http://ftpmaster.internal/ubuntu/ xenial/main liblwp-protocol-https-perl all 6.06-2 [8682 B] Get:67 http://ftpmaster.internal/ubuntu/ xenial/main libwww-robotrules-perl all 6.01-1 [14.1 kB] Get:68 http://ftpmaster.internal/ubuntu/ xenial/main libwww-perl all 6.13-1 [146 kB] Get:69 http://ftpmaster.internal/ubuntu/ xenial/main libxml-parser-perl s390x 2.44-1 [204 kB] Get:70 http://ftpmaster.internal/ubuntu/ xenial/main intltool all 0.51.0-1 [44.7 kB] Get:71 http://ftpmaster.internal/ubuntu/ xenial/main dh-translations all 123 [21.9 kB] Get:72 http://ftpmaster.internal/ubuntu/ xenial/main python-scour all 0.26-3ubuntu1 [40.4 kB] Get:73 http://ftpmaster.internal/ubuntu/ xenial/main cdbs all 0.4.130ubuntu2 [42.8 kB] Get:74 http://ftpmaster.internal/ubuntu/ xenial/main libgfortran3 s390x 5.2.1-27ubuntu1 [228 kB] Get:75 http://ftpmaster.internal/ubuntu/ xenial/main libgfortran-5-dev s390x 5.2.1-27ubuntu1 [256 kB] Get:76 http://ftpmaster.internal/ubuntu/ xenial/main gfortran-5 s390x 5.2.1-27ubuntu1 [23.5 MB] Get:77 http://ftpmaster.internal/ubuntu/ xenial/main gfortran s390x 4:5.2.1-16ubuntu2 [1288 B] Get:78 http://ftpmaster.internal/ubuntu/ xenial/main libblas-common s390x 1.2.20110419-11 [3044 B] Get:79 http://ftpmaster.internal/ubuntu/ xenial/main libblas3 s390x 1.2.20110419-11 [136 kB] Get:80 http://ftpmaster.internal/ubuntu/ xenial/main libblas-dev s390x 1.2.20110419-11 [131 kB] Get:81 http://ftpmaster.internal/ubuntu/ xenial/main libbz2-dev s390x 1.0.6-8 [31.5 kB] Get:82 http://ftpmaster.internal/ubuntu/ xenial/main libpixman-1-0 s390x 0.33.4-1 [138 kB] Get:83 http://ftpmaster.internal/ubuntu/ xenial/main libxcb-render0 s390x 1.11.1-1ubuntu1 [11.4 kB] Get:84 http://ftpmaster.internal/ubuntu/ xenial/main libxcb-shm0 s390x 1.11.1-1ubuntu1 [5488 B] Get:85 http://ftpmaster.internal/ubuntu/ xenial/main libxrender1 s390x 1:0.9.9-0ubuntu1 [17.6 kB] Get:86 http://ftpmaster.internal/ubuntu/ xenial/main libcairo2 s390x 1.14.4-1 [520 kB] Get:87 http://ftpmaster.internal/ubuntu/ xenial/main libcurl3 s390x 7.45.0-1ubuntu1 [175 kB] Get:88 http://ftpmaster.internal/ubuntu/ xenial/main libdatrie1 s390x 0.2.10-1 [17.1 kB] Get:89 http://ftpmaster.internal/ubuntu/ xenial/main libgraphite2-3 s390x 1.2.4-3ubuntu1 [52.1 kB] Get:90 http://ftpmaster.internal/ubuntu/ xenial/main libharfbuzz0b s390x 1.0.1-1build2 [136 kB] Get:91 http://ftpmaster.internal/ubuntu/ xenial/main x11-common all 1:7.7+12ubuntu1 [22.4 kB] Get:92 http://ftpmaster.internal/ubuntu/ xenial/main libice6 s390x 2:1.0.9-1 [37.3 kB] Get:93 http://ftpmaster.internal/ubuntu/ xenial/main libjpeg-turbo8-dev s390x 1.3.0-0ubuntu2 [231 kB] Get:94 http://ftpmaster.internal/ubuntu/ xenial/main libjpeg8 s390x 8c-2ubuntu8 [2142 B] Get:95 http://ftpmaster.internal/ubuntu/ xenial/main libjpeg8-dev s390x 8c-2ubuntu8 [1612 B] Get:96 http://ftpmaster.internal/ubuntu/ xenial/main libjpeg-dev s390x 8c-2ubuntu8 [1612 B] Get:97 http://ftpmaster.internal/ubuntu/ xenial/main liblapack3 s390x 3.5.0-5 [1404 kB] Get:98 http://ftpmaster.internal/ubuntu/ xenial/main liblapack-dev s390x 3.5.0-5 [1386 kB] Get:99 http://ftpmaster.internal/ubuntu/ xenial/main libtinfo-dev s390x 5.9+20150516-2ubuntu1 [80.8 kB] Get:100 http://ftpmaster.internal/ubuntu/ xenial/main libncurses5-dev s390x 5.9+20150516-2ubuntu1 [169 kB] Get:101 http://ftpmaster.internal/ubuntu/ xenial/main libthai-data all 0.1.24-1 [131 kB] Get:102 http://ftpmaster.internal/ubuntu/ xenial/main libthai0 s390x 0.1.24-1 [17.3 kB] Get:103 http://ftpmaster.internal/ubuntu/ xenial/main libpango-1.0-0 s390x 1.38.1-1 [144 kB] Get:104 http://ftpmaster.internal/ubuntu/ xenial/main libpangoft2-1.0-0 s390x 1.38.1-1 [32.1 kB] Get:105 http://ftpmaster.internal/ubuntu/ xenial/main libpangocairo-1.0-0 s390x 1.38.1-1 [19.2 kB] Get:106 http://ftpmaster.internal/ubuntu/ xenial/main libpaper1 s390x 1.1.24+nmu4ubuntu1 [13.6 kB] Get:107 http://ftpmaster.internal/ubuntu/ xenial/main libpaper-utils s390x 1.1.24+nmu4ubuntu1 [8180 B] Get:108 http://ftpmaster.internal/ubuntu/ xenial/main libpcre16-3 s390x 2:8.35-7.1ubuntu1 [78.9 kB] Get:109 http://ftpmaster.internal/ubuntu/ xenial/main libpcre32-3 s390x 2:8.35-7.1ubuntu1 [73.8 kB] Get:110 http://ftpmaster.internal/ubuntu/ xenial/main libpcre3-dev s390x 2:8.35-7.1ubuntu1 [370 kB] Get:111 http://ftpmaster.internal/ubuntu/ xenial/main zlib1g-dev s390x 1:1.2.8.dfsg-2ubuntu4 [168 kB] Get:112 http://ftpmaster.internal/ubuntu/ xenial/main libpng12-dev s390x 1.2.54-1 [183 kB] Get:113 http://ftpmaster.internal/ubuntu/ xenial/main libreadline6-dev s390x 6.3-8ubuntu1 [125 kB] Get:114 http://ftpmaster.internal/ubuntu/ xenial/main libreadline-dev s390x 6.3-8ubuntu1 [992 B] Get:115 http://ftpmaster.internal/ubuntu/ xenial/main libsm6 s390x 2:1.2.2-1 [15.3 kB] Get:116 http://ftpmaster.internal/ubuntu/ xenial/main libtcl8.6 s390x 8.6.4+dfsg-2ubuntu1 [816 kB] Get:117 http://ftpmaster.internal/ubuntu/ xenial/main libjbig0 s390x 2.1-3.1 [26.6 kB] Get:118 http://ftpmaster.internal/ubuntu/ xenial/main libtiff5 s390x 4.0.5-1 [139 kB] Get:119 http://ftpmaster.internal/ubuntu/ xenial/main libxft2 s390x 2.3.2-1 [36.7 kB] Get:120 http://ftpmaster.internal/ubuntu/ xenial/main libxss1 s390x 1:1.2.2-1 [7602 B] Get:121 http://ftpmaster.internal/ubuntu/ xenial/main libtk8.6 s390x 8.6.4+dfsg-2ubuntu1 [660 kB] Get:122 http://ftpmaster.internal/ubuntu/ xenial/main libxt6 s390x 1:1.1.5-0ubuntu1 [147 kB] Get:123 http://ftpmaster.internal/ubuntu/ xenial/main zip s390x 3.0-11 [158 kB] Get:124 http://ftpmaster.internal/ubuntu/ xenial/main unzip s390x 6.0-20ubuntu1 [156 kB] Get:125 http://ftpmaster.internal/ubuntu/ xenial/main xdg-utils all 1.1.0~rc3+git20150907-1ubuntu3 [58.1 kB] Get:126 http://ftpmaster.internal/ubuntu/ xenial/universe r-base-core s390x 3.2.2-1 [20.2 MB] Get:127 http://ftpmaster.internal/ubuntu/ xenial/main liblzma-dev s390x 5.1.1alpha+20120614-2ubuntu2 [140 kB] Get:128 http://ftpmaster.internal/ubuntu/ xenial/universe r-base-dev all 3.2.2-1 [4348 B] Get:129 http://ftpmaster.internal/ubuntu/ xenial/universe r-cran-lattice s390x 0.20-33-1 [703 kB] Get:130 http://ftpmaster.internal/ubuntu/ xenial/universe r-cran-matrix s390x 1.2-3-1 [2961 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 79.1 MB in 51s (1527 kB/s) Selecting previously unselected package libasprintf0v5:s390x. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11407 files and directories currently installed.) Preparing to unpack .../libasprintf0v5_0.19.4-1ubuntu3_s390x.deb ... Unpacking libasprintf0v5:s390x (0.19.4-1ubuntu3) ... Selecting previously unselected package groff-base. Preparing to unpack .../groff-base_1.22.3-4_s390x.deb ... Unpacking groff-base (1.22.3-4) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../bsdmainutils_9.0.6ubuntu1_s390x.deb ... 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Selecting previously unselected package libjpeg-dev:s390x. Preparing to unpack .../libjpeg-dev_8c-2ubuntu8_s390x.deb ... Unpacking libjpeg-dev:s390x (8c-2ubuntu8) ... Selecting previously unselected package liblapack3. Preparing to unpack .../liblapack3_3.5.0-5_s390x.deb ... Unpacking liblapack3 (3.5.0-5) ... Selecting previously unselected package liblapack-dev. Preparing to unpack .../liblapack-dev_3.5.0-5_s390x.deb ... Unpacking liblapack-dev (3.5.0-5) ... Selecting previously unselected package libtinfo-dev:s390x. Preparing to unpack .../libtinfo-dev_5.9+20150516-2ubuntu1_s390x.deb ... Unpacking libtinfo-dev:s390x (5.9+20150516-2ubuntu1) ... Selecting previously unselected package libncurses5-dev:s390x. Preparing to unpack .../libncurses5-dev_5.9+20150516-2ubuntu1_s390x.deb ... Unpacking libncurses5-dev:s390x (5.9+20150516-2ubuntu1) ... Selecting previously unselected package libthai-data. Preparing to unpack .../libthai-data_0.1.24-1_all.deb ... Unpacking libthai-data (0.1.24-1) ... Selecting previously unselected package libthai0:s390x. Preparing to unpack .../libthai0_0.1.24-1_s390x.deb ... Unpacking libthai0:s390x (0.1.24-1) ... Selecting previously unselected package libpango-1.0-0:s390x. Preparing to unpack .../libpango-1.0-0_1.38.1-1_s390x.deb ... Unpacking libpango-1.0-0:s390x (1.38.1-1) ... Selecting previously unselected package libpangoft2-1.0-0:s390x. Preparing to unpack .../libpangoft2-1.0-0_1.38.1-1_s390x.deb ... Unpacking libpangoft2-1.0-0:s390x (1.38.1-1) ... Selecting previously unselected package libpangocairo-1.0-0:s390x. Preparing to unpack .../libpangocairo-1.0-0_1.38.1-1_s390x.deb ... Unpacking libpangocairo-1.0-0:s390x (1.38.1-1) ... Selecting previously unselected package libpaper1:s390x. Preparing to unpack .../libpaper1_1.1.24+nmu4ubuntu1_s390x.deb ... Unpacking libpaper1:s390x (1.1.24+nmu4ubuntu1) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../libpaper-utils_1.1.24+nmu4ubuntu1_s390x.deb ... Unpacking libpaper-utils (1.1.24+nmu4ubuntu1) ... Selecting previously unselected package libpcre16-3:s390x. Preparing to unpack .../libpcre16-3_2%3a8.35-7.1ubuntu1_s390x.deb ... Unpacking libpcre16-3:s390x (2:8.35-7.1ubuntu1) ... Selecting previously unselected package libpcre32-3:s390x. Preparing to unpack .../libpcre32-3_2%3a8.35-7.1ubuntu1_s390x.deb ... Unpacking libpcre32-3:s390x (2:8.35-7.1ubuntu1) ... Selecting previously unselected package libpcre3-dev:s390x. Preparing to unpack .../libpcre3-dev_2%3a8.35-7.1ubuntu1_s390x.deb ... Unpacking libpcre3-dev:s390x (2:8.35-7.1ubuntu1) ... Selecting previously unselected package zlib1g-dev:s390x. Preparing to unpack .../zlib1g-dev_1%3a1.2.8.dfsg-2ubuntu4_s390x.deb ... Unpacking zlib1g-dev:s390x (1:1.2.8.dfsg-2ubuntu4) ... Selecting previously unselected package libpng12-dev:s390x. Preparing to unpack .../libpng12-dev_1.2.54-1_s390x.deb ... Unpacking libpng12-dev:s390x (1.2.54-1) ... Selecting previously unselected package libreadline6-dev:s390x. Preparing to unpack .../libreadline6-dev_6.3-8ubuntu1_s390x.deb ... Unpacking libreadline6-dev:s390x (6.3-8ubuntu1) ... Selecting previously unselected package libreadline-dev:s390x. Preparing to unpack .../libreadline-dev_6.3-8ubuntu1_s390x.deb ... Unpacking libreadline-dev:s390x (6.3-8ubuntu1) ... Selecting previously unselected package libsm6:s390x. Preparing to unpack .../libsm6_2%3a1.2.2-1_s390x.deb ... Unpacking libsm6:s390x (2:1.2.2-1) ... Selecting previously unselected package libtcl8.6:s390x. Preparing to unpack .../libtcl8.6_8.6.4+dfsg-2ubuntu1_s390x.deb ... Unpacking libtcl8.6:s390x (8.6.4+dfsg-2ubuntu1) ... Selecting previously unselected package libjbig0:s390x. Preparing to unpack .../libjbig0_2.1-3.1_s390x.deb ... Unpacking libjbig0:s390x (2.1-3.1) ... Selecting previously unselected package libtiff5:s390x. Preparing to unpack .../libtiff5_4.0.5-1_s390x.deb ... Unpacking libtiff5:s390x (4.0.5-1) ... Selecting previously unselected package libxft2:s390x. Preparing to unpack .../libxft2_2.3.2-1_s390x.deb ... Unpacking libxft2:s390x (2.3.2-1) ... Selecting previously unselected package libxss1:s390x. Preparing to unpack .../libxss1_1%3a1.2.2-1_s390x.deb ... Unpacking libxss1:s390x (1:1.2.2-1) ... Selecting previously unselected package libtk8.6:s390x. Preparing to unpack .../libtk8.6_8.6.4+dfsg-2ubuntu1_s390x.deb ... Unpacking libtk8.6:s390x (8.6.4+dfsg-2ubuntu1) ... Selecting previously unselected package libxt6:s390x. Preparing to unpack .../libxt6_1%3a1.1.5-0ubuntu1_s390x.deb ... Unpacking libxt6:s390x (1:1.1.5-0ubuntu1) ... Selecting previously unselected package zip. Preparing to unpack .../archives/zip_3.0-11_s390x.deb ... Unpacking zip (3.0-11) ... Selecting previously unselected package unzip. Preparing to unpack .../unzip_6.0-20ubuntu1_s390x.deb ... Unpacking unzip (6.0-20ubuntu1) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../xdg-utils_1.1.0~rc3+git20150907-1ubuntu3_all.deb ... Unpacking xdg-utils (1.1.0~rc3+git20150907-1ubuntu3) ... Selecting previously unselected package r-base-core. Preparing to unpack .../r-base-core_3.2.2-1_s390x.deb ... Unpacking r-base-core (3.2.2-1) ... Selecting previously unselected package liblzma-dev:s390x. Preparing to unpack .../liblzma-dev_5.1.1alpha+20120614-2ubuntu2_s390x.deb ... Unpacking liblzma-dev:s390x (5.1.1alpha+20120614-2ubuntu2) ... Selecting previously unselected package r-base-dev. Preparing to unpack .../r-base-dev_3.2.2-1_all.deb ... Unpacking r-base-dev (3.2.2-1) ... Selecting previously unselected package r-cran-lattice. Preparing to unpack .../r-cran-lattice_0.20-33-1_s390x.deb ... Unpacking r-cran-lattice (0.20-33-1) ... Selecting previously unselected package r-cran-matrix. Preparing to unpack .../r-cran-matrix_1.2-3-1_s390x.deb ... Unpacking r-cran-matrix (1.2-3-1) ... Selecting previously unselected package sbuild-build-depends-r-cran-igraph-dummy. Preparing to unpack .../sbuild-build-depends-r-cran-igraph-dummy.deb ... Unpacking sbuild-build-depends-r-cran-igraph-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Processing triggers for systemd (228-2ubuntu1) ... Setting up libasprintf0v5:s390x (0.19.4-1ubuntu3) ... Setting up groff-base (1.22.3-4) ... Setting up bsdmainutils (9.0.6ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libpipeline1:s390x (1.4.1-1) ... Setting up man-db (2.7.5-1) ... Not building database; man-db/auto-update is not 'true'. Setting up fonts-dejavu-core (2.35-1) ... Setting up ucf (3.0031) ... Setting up fontconfig-config (2.11.1-0ubuntu6) ... Setting up libexpat1:s390x (2.1.0-7) ... Setting up libfreetype6:s390x (2.5.2-4ubuntu2) ... Setting up libfontconfig1:s390x (2.11.1-0ubuntu6) ... Setting up fontconfig (2.11.1-0ubuntu6) ... Regenerating fonts cache... done. Setting up libjpeg-turbo8:s390x (1.3.0-0ubuntu2) ... Setting up libpcrecpp0v5:s390x (2:8.35-7.1ubuntu1) ... Setting up mime-support (3.59ubuntu1) ... Setting up libpython2.7-stdlib:s390x (2.7.10-4ubuntu2) ... Setting up python2.7 (2.7.10-4ubuntu2) ... Setting up libpython-stdlib:s390x (2.7.9-1) ... Setting up python (2.7.9-1) ... Setting up libmagic1:s390x (1:5.25-2ubuntu1) ... Setting up file (1:5.25-2ubuntu1) ... Setting up netbase (5.3) ... Setting up gettext-base (0.19.4-1ubuntu3) ... Setting up libglib2.0-0:s390x (2.47.3-3) ... No schema files found: doing nothing. Setting up libicu55:s390x (55.1-6ubuntu1) ... Setting up libxau6:s390x (1:1.0.8-1) ... Setting up libxdmcp6:s390x (1:1.1.2-1.1) ... Setting up libxcb1:s390x (1.11.1-1ubuntu1) ... Setting up libx11-data (2:1.6.3-1ubuntu2) ... Setting up libx11-6:s390x (2:1.6.3-1ubuntu2) ... Setting up libxext6:s390x (2:1.3.3-1) ... Setting up libxml2:s390x (2.9.2+zdfsg1-4ubuntu1) ... Setting up libsigsegv2:s390x (2.10-4) ... Setting up m4 (1.4.17-4) ... Setting up autoconf (2.69-9) ... Setting up autotools-dev (20150820.1) ... Setting up automake (1:1.15-1ubuntu1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libcroco3:s390x (0.6.9-1) ... Setting up libunistring0:s390x (0.9.3-5.2ubuntu1) ... Setting up gettext (0.19.4-1ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up po-debconf (1.0.18) ... Setting up libarchive-zip-perl (1.53-1) ... Setting up libfile-stripnondeterminism-perl (0.014-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up liburi-perl (1.69-1) ... Setting up libencode-locale-perl (1.05-1) ... Setting up libhttp-date-perl (6.02-1) ... Setting up libfile-listing-perl (6.04-1) ... Setting up libhtml-tagset-perl (3.20-2) ... Setting up libhtml-parser-perl (3.71-2) ... Setting up libhtml-tree-perl (5.03-2) ... Setting up libio-html-perl (1.001-1) ... Setting up liblwp-mediatypes-perl (6.02-1) ... Setting up libhttp-message-perl (6.11-1) ... Setting up libhttp-cookies-perl (6.01-1) ... Setting up libhttp-negotiate-perl (6.00-2) ... Setting up libnet-ssleay-perl (1.72-1) ... Setting up libio-socket-ssl-perl (2.021-1) ... Setting up libnet-http-perl (6.09-1) ... Setting up libwww-robotrules-perl (6.01-1) ... Setting up python-scour (0.26-3ubuntu1) ... Setting up libgfortran3:s390x (5.2.1-27ubuntu1) ... Setting up libgfortran-5-dev:s390x (5.2.1-27ubuntu1) ... Setting up gfortran-5 (5.2.1-27ubuntu1) ... Setting up gfortran (4:5.2.1-16ubuntu2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libblas-common (1.2.20110419-11) ... Setting up libblas3 (1.2.20110419-11) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up libblas-dev (1.2.20110419-11) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up libbz2-dev:s390x (1.0.6-8) ... Setting up libpixman-1-0:s390x (0.33.4-1) ... Setting up libxcb-render0:s390x (1.11.1-1ubuntu1) ... Setting up libxcb-shm0:s390x (1.11.1-1ubuntu1) ... Setting up libxrender1:s390x (1:0.9.9-0ubuntu1) ... Setting up libcairo2:s390x (1.14.4-1) ... Setting up libcurl3:s390x (7.45.0-1ubuntu1) ... Setting up libdatrie1:s390x (0.2.10-1) ... Setting up libgraphite2-3:s390x (1.2.4-3ubuntu1) ... Setting up libharfbuzz0b:s390x (1.0.1-1build2) ... Setting up x11-common (1:7.7+12ubuntu1) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6:s390x (2:1.0.9-1) ... Setting up libjpeg-turbo8-dev:s390x (1.3.0-0ubuntu2) ... Setting up libjpeg8:s390x (8c-2ubuntu8) ... Setting up libjpeg8-dev:s390x (8c-2ubuntu8) ... Setting up libjpeg-dev:s390x (8c-2ubuntu8) ... Setting up liblapack3 (3.5.0-5) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up liblapack-dev (3.5.0-5) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libtinfo-dev:s390x (5.9+20150516-2ubuntu1) ... Setting up libncurses5-dev:s390x (5.9+20150516-2ubuntu1) ... Setting up libthai-data (0.1.24-1) ... Setting up libthai0:s390x (0.1.24-1) ... Setting up libpango-1.0-0:s390x (1.38.1-1) ... Setting up libpangoft2-1.0-0:s390x (1.38.1-1) ... Setting up libpangocairo-1.0-0:s390x (1.38.1-1) ... Setting up libpaper1:s390x (1.1.24+nmu4ubuntu1) ... Creating config file /etc/papersize with new version Setting up libpaper-utils (1.1.24+nmu4ubuntu1) ... Setting up libpcre16-3:s390x (2:8.35-7.1ubuntu1) ... Setting up libpcre32-3:s390x (2:8.35-7.1ubuntu1) ... Setting up libpcre3-dev:s390x (2:8.35-7.1ubuntu1) ... Setting up zlib1g-dev:s390x (1:1.2.8.dfsg-2ubuntu4) ... Setting up libpng12-dev:s390x (1.2.54-1) ... Setting up libreadline6-dev:s390x (6.3-8ubuntu1) ... Setting up libreadline-dev:s390x (6.3-8ubuntu1) ... Setting up libsm6:s390x (2:1.2.2-1) ... Setting up libtcl8.6:s390x (8.6.4+dfsg-2ubuntu1) ... Setting up libjbig0:s390x (2.1-3.1) ... Setting up libtiff5:s390x (4.0.5-1) ... Setting up libxft2:s390x (2.3.2-1) ... Setting up libxss1:s390x (1:1.2.2-1) ... Setting up libtk8.6:s390x (8.6.4+dfsg-2ubuntu1) ... Setting up libxt6:s390x (1:1.1.5-0ubuntu1) ... Setting up zip (3.0-11) ... Setting up unzip (6.0-20ubuntu1) ... Setting up xdg-utils (1.1.0~rc3+git20150907-1ubuntu3) ... Setting up r-base-core (3.2.2-1) ... Creating config file /etc/R/Renviron with new version Setting up liblzma-dev:s390x (5.1.1alpha+20120614-2ubuntu2) ... Setting up r-cran-lattice (0.20-33-1) ... Setting up r-cran-matrix (1.2-3-1) ... Setting up debhelper (9.20151126ubuntu1) ... Setting up libwww-perl (6.13-1) ... Setting up libxml-parser-perl (2.44-1) ... Setting up intltool (0.51.0-1) ... Setting up dh-translations (123) ... Setting up cdbs (0.4.130ubuntu2) ... Setting up r-base-dev (3.2.2-1) ... Setting up sbuild-build-depends-r-cran-igraph-dummy (0.invalid.0) ... Setting up dh-strip-nondeterminism (0.014-1) ... Setting up liblwp-protocol-https-perl (6.06-2) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Processing triggers for systemd (228-2ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.3.0-0-generic s390x (s390x) Toolchain package versions: binutils_2.25.90.20151125-2ubuntu1 dpkg-dev_1.18.3ubuntu1 g++-5_5.2.1-27ubuntu1 gcc-5_5.2.1-27ubuntu1 libc6-dev_2.21-0ubuntu5 libstdc++-5-dev_5.2.1-27ubuntu1 libstdc++6_5.2.1-27ubuntu1 linux-libc-dev_4.3.0-1.10 Package versions: adduser_3.113+nmu3ubuntu4 advancecomp_1.20-1 apt_1.0.10.2ubuntu1 apt-transport-https_1.0.10.2ubuntu1 autoconf_2.69-9 automake_1:1.15-1ubuntu1 autotools-dev_20150820.1 base-files_9.4ubuntu3 base-passwd_3.5.38 bash_4.3-14ubuntu1 binutils_2.25.90.20151125-2ubuntu1 bsdmainutils_9.0.6ubuntu1 bsdutils_1:2.27.1-1ubuntu3 build-essential_12.1ubuntu2 bzip2_1.0.6-8 ca-certificates_20150426ubuntu1 cdbs_0.4.130ubuntu2 coreutils_8.23-4ubuntu2 cpp_4:5.2.1-16ubuntu2 cpp-5_5.2.1-27ubuntu1 dash_0.5.7-4ubuntu2 debconf_1.5.58ubuntu1 debhelper_9.20151126ubuntu1 debianutils_4.5.1 dh-strip-nondeterminism_0.014-1 dh-translations_123 diffutils_1:3.3-2 dmsetup_2:1.02.99-1ubuntu1 dpkg_1.18.3ubuntu1 dpkg-dev_1.18.3ubuntu1 e2fslibs_1.42.13-1ubuntu1 e2fsprogs_1.42.13-1ubuntu1 fakeroot_1.20.2-1ubuntu1 file_1:5.25-2ubuntu1 findutils_4.4.2-10 fontconfig_2.11.1-0ubuntu6 fontconfig-config_2.11.1-0ubuntu6 fonts-dejavu-core_2.35-1 g++_4:5.2.1-16ubuntu2 g++-5_5.2.1-27ubuntu1 gcc_4:5.2.1-16ubuntu2 gcc-5_5.2.1-27ubuntu1 gcc-5-base_5.2.1-27ubuntu1 gettext_0.19.4-1ubuntu3 gettext-base_0.19.4-1ubuntu3 gfortran_4:5.2.1-16ubuntu2 gfortran-5_5.2.1-27ubuntu1 gnupg_1.4.19-6ubuntu1 gpgv_1.4.19-6ubuntu1 grep_2.21-2 groff-base_1.22.3-4 gzip_1.6-4ubuntu1 hostname_3.16ubuntu2 init_1.24ubuntu2 initscripts_2.88dsf-59.2ubuntu3 insserv_1.14.0-5ubuntu3 intltool_0.51.0-1 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-2 libapparmor1_2.10-0ubuntu8 libapt-pkg4.16_1.0.10.2ubuntu1 libarchive-zip-perl_1.53-1 libasn1-8-heimdal_1.6~rc2+dfsg-10ubuntu1 libasprintf0v5_0.19.4-1ubuntu3 libatomic1_5.2.1-27ubuntu1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.4-4ubuntu1 libaudit1_1:2.4.4-4ubuntu1 libblas-common_1.2.20110419-11 libblas-dev_1.2.20110419-11 libblas3_1.2.20110419-11 libblkid1_2.27.1-1ubuntu3 libbz2-1.0_1.0.6-8 libbz2-dev_1.0.6-8 libc-bin_2.21-0ubuntu5 libc-dev-bin_2.21-0ubuntu5 libc6_2.21-0ubuntu5 libc6-dev_2.21-0ubuntu5 libcairo2_1.14.4-1 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.2.1-27ubuntu1 libcomerr2_1.42.13-1ubuntu1 libcroco3_0.6.9-1 libcryptsetup4_2:1.6.6-5ubuntu2 libcurl3_7.45.0-1ubuntu1 libcurl3-gnutls_7.45.0-1ubuntu1 libdatrie1_0.2.10-1 libdb5.3_5.3.28-11 libdebconfclient0_0.198ubuntu1 libdevmapper1.02.1_2:1.02.99-1ubuntu1 libdpkg-perl_1.18.3ubuntu1 libencode-locale-perl_1.05-1 libexpat1_2.1.0-7 libfakeroot_1.20.2-1ubuntu1 libfdisk1_2.27.1-1ubuntu3 libffi6_3.2.1-3 libfile-listing-perl_6.04-1 libfile-stripnondeterminism-perl_0.014-1 libfontconfig1_2.11.1-0ubuntu6 libfreetype6_2.5.2-4ubuntu2 libgcc-5-dev_5.2.1-27ubuntu1 libgcc1_1:5.2.1-27ubuntu1 libgcrypt20_1.6.4-3 libgdbm3_1.8.3-13.1 libgfortran-5-dev_5.2.1-27ubuntu1 libgfortran3_5.2.1-27ubuntu1 libglib2.0-0_2.47.3-3 libgmp10_2:6.1.0+dfsg-2 libgnutls-deb0-28_3.3.18-1ubuntu1 libgomp1_5.2.1-27ubuntu1 libgpg-error0_1.20-1 libgraphite2-3_1.2.4-3ubuntu1 libgssapi-krb5-2_1.13.2+dfsg-4 libgssapi3-heimdal_1.6~rc2+dfsg-10ubuntu1 libharfbuzz0b_1.0.1-1build2 libhcrypto4-heimdal_1.6~rc2+dfsg-10ubuntu1 libheimbase1-heimdal_1.6~rc2+dfsg-10ubuntu1 libheimntlm0-heimdal_1.6~rc2+dfsg-10ubuntu1 libhogweed4_3.1.1-4 libhtml-parser-perl_3.71-2 libhtml-tagset-perl_3.20-2 libhtml-tree-perl_5.03-2 libhttp-cookies-perl_6.01-1 libhttp-date-perl_6.02-1 libhttp-message-perl_6.11-1 libhttp-negotiate-perl_6.00-2 libhx509-5-heimdal_1.6~rc2+dfsg-10ubuntu1 libice6_2:1.0.9-1 libicu55_55.1-6ubuntu1 libidn11_1.32-3ubuntu1 libio-html-perl_1.001-1 libio-socket-ssl-perl_2.021-1 libisl15_0.15-3 libjbig0_2.1-3.1 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_1.3.0-0ubuntu2 libjpeg-turbo8-dev_1.3.0-0ubuntu2 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libk5crypto3_1.13.2+dfsg-4 libkeyutils1_1.5.9-5ubuntu1 libkmod2_21-1ubuntu1 libkrb5-26-heimdal_1.6~rc2+dfsg-10ubuntu1 libkrb5-3_1.13.2+dfsg-4 libkrb5support0_1.13.2+dfsg-4 liblapack-dev_3.5.0-5 liblapack3_3.5.0-5 libldap-2.4-2_2.4.41+dfsg-1ubuntu2 liblockfile-bin_1.09-6ubuntu1 liblockfile1_1.09-6ubuntu1 liblwp-mediatypes-perl_6.02-1 liblwp-protocol-https-perl_6.06-2 liblzma-dev_5.1.1alpha+20120614-2ubuntu2 liblzma5_5.1.1alpha+20120614-2ubuntu2 libmagic1_1:5.25-2ubuntu1 libmount1_2.27.1-1ubuntu3 libmpc3_1.0.3-1 libmpfr4_3.1.3-1 libncurses5_5.9+20150516-2ubuntu1 libncurses5-dev_5.9+20150516-2ubuntu1 libncursesw5_5.9+20150516-2ubuntu1 libnet-http-perl_6.09-1 libnet-ssleay-perl_1.72-1 libnettle6_3.1.1-4 libp11-kit0_0.23.1-3 libpam-modules_1.1.8-3.1ubuntu3 libpam-modules-bin_1.1.8-3.1ubuntu3 libpam-runtime_1.1.8-3.1ubuntu3 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login_1:4.1.5.1-1.1ubuntu7 lsb-base_9.20150917ubuntu1 m4_1.4.17-4 make_4.0-8.2 man-db_2.7.5-1 mawk_1.3.3-17ubuntu2 mime-support_3.59ubuntu1 mount_2.27.1-1ubuntu3 multiarch-support_2.21-0ubuntu5 ncurses-base_5.9+20150516-2ubuntu1 ncurses-bin_5.9+20150516-2ubuntu1 netbase_5.3 openssl_1.0.2d-0ubuntu2 optipng_0.7.5-1 passwd_1:4.1.5.1-1.1ubuntu7 patch_2.7.5-1 perl_5.20.2-6 perl-base_5.20.2-6 perl-modules_5.20.2-6 pkg-create-dbgsym_0.70 pkgbinarymangler_123 po-debconf_1.0.18 policyrcd-script-zg2_0.1-2 procps_1:3.3.9-1ubuntu8 python_2.7.9-1 python-minimal_2.7.9-1 python-scour_0.26-3ubuntu1 python2.7_2.7.10-4ubuntu2 python2.7-minimal_2.7.10-4ubuntu2 r-base-core_3.2.2-1 r-base-dev_3.2.2-1 r-cran-lattice_0.20-33-1 r-cran-matrix_1.2-3-1 readline-common_6.3-8ubuntu1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-igraph-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 systemd_228-2ubuntu1 systemd-sysv_228-2ubuntu1 sysv-rc_2.88dsf-59.2ubuntu3 sysvinit-utils_2.88dsf-59.2ubuntu3 tar_1.28-2.1 tzdata_2015g-1 ubuntu-keyring_2012.05.19 ucf_3.0031 udev_228-2ubuntu1 unzip_6.0-20ubuntu1 util-linux_2.27.1-1ubuntu3 x11-common_1:7.7+12ubuntu1 xdg-utils_1.1.0~rc3+git20150907-1ubuntu3 xz-utils_5.1.1alpha+20120614-2ubuntu2 zip_3.0-11 zlib1g_1:1.2.8.dfsg-2ubuntu4 zlib1g-dev_1:1.2.8.dfsg-2ubuntu4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Wed Jul 1 16:24:20 2015 UTC using RSA key ID D1C646D1 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./r-cran-igraph_0.7.1-1.dsc dpkg-source: info: extracting r-cran-igraph in r-cran-igraph-0.7.1 dpkg-source: info: unpacking r-cran-igraph_0.7.1.orig.tar.gz dpkg-source: info: unpacking r-cran-igraph_0.7.1-1.debian.tar.xz dpkg-source: info: applying spelling.patch dpkg-source: info: applying remove_arpack_test.patch dpkg-source: info: applying remove_failing_tests.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- DEB_BUILD_OPTIONS=parallel=4 HOME=/home/buildd LANG=C LOGNAME=buildd MAIL=/var/mail/buildd OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games PWD=/<> SHELL=/bin/sh SUDO_COMMAND=/usr/sbin/chroot /<> su buildd -s /bin/sh -c cd '/<>' && 'env' SUDO_GID=2501 SUDO_UID=2001 SUDO_USER=buildd TERM=unknown USER=buildd USERNAME=root dpkg-buildpackage ----------------- dpkg-buildpackage: source package r-cran-igraph dpkg-buildpackage: source version 0.7.1-1 dpkg-buildpackage: source distribution unstable dpkg-source --before-build r-cran-igraph-0.7.1 dpkg-buildpackage: host architecture s390x fakeroot debian/rules clean test -x debian/rules dh_clean if test -d src; then \ find src -regex ".*\.o" | \ xargs --no-run-if-empty -r rm; \ fi rm -f config.log config.status rm -f src/Makevars src/config.h dh_clean debian/rules build-arch test -x debian/rules mkdir -p "." fakeroot debian/rules binary-arch test -x debian/rules dh_testroot dh_prep dh_installdirs -A mkdir -p "." dh_installdirs usr/lib/R/site-library echo "R:Depends=r-base-core (>= 3.2.2-1), r-api-3" >> debian/r-cran-igraph.substvars if test -f /usr/bin/xvfb-run; then \ xvfb-run -a \ R CMD INSTALL -l /<>/debian/r-cran-igraph/usr/lib/R/site-library --clean \ . \ "--built-timestamp=\"Thu, 25 Sep 2014 18:00:25 +0200\"" \ ; \ else \ R CMD INSTALL -l /<>/debian/r-cran-igraph/usr/lib/R/site-library \ --clean . \ "--built-timestamp=\"Thu, 25 Sep 2014 18:00:25 +0200\"" \ ; \ fi * installing *source* package 'igraph' ... files 'inst/tests/test_arpack.R', 'inst/tests/test_leading.eigenvector.community.R', 'src/config.h' are missing file 'src/drl_layout.cpp' has the wrong MD5 checksum checking for gcc... gcc -std=gnu99 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc -std=gnu99 accepts -g... yes checking for gcc -std=gnu99 option to accept ISO C89... none needed checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking how to run the C++ preprocessor... g++ -E checking for rintf... yes checking for finite... yes checking for expm1... yes checking for rint... yes checking for log2... yes checking for logbl... yes checking for snprintf... yes checking for log1p... yes checking for round... yes checking for fmin... yes checking for stpcpy... yes checking how to run the C preprocessor... gcc -std=gnu99 -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking whether stpcpy is declared... yes checking sys/times.h usability... yes checking sys/times.h presence... yes checking for sys/times.h... yes checking for xml2-config... none checking for __gmpz_add in -lgmp... no configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/config.h ** libs make[1]: Entering directory '/<>/src' g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c Color.cpp -o Color.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c DensityGrid.cpp -o DensityGrid.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c DensityGrid_3d.cpp -o DensityGrid_3d.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c Light.cpp -o Light.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c NetDataTypes.cpp -o NetDataTypes.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c NetRoutines.cpp -o NetRoutines.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c Point.cpp -o Point.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RIgraphRay.cpp -o RIgraphRay.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c Ray.cpp -o Ray.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RayTracer.cpp -o RayTracer.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RayVector.cpp -o RayVector.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c Shape.cpp -o Shape.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c Sphere.cpp -o Sphere.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c Triangle.cpp -o Triangle.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c adjlist.c -o adjlist.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_1.c -o amd_1.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_2.c -o amd_2.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_aat.c -o amd_aat.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_control.c -o amd_control.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_defaults.c -o amd_defaults.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_dump.c -o amd_dump.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_info.c -o amd_info.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_order.c -o amd_order.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_post_tree.c -o amd_post_tree.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_postorder.c -o amd_postorder.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_preprocess.c -o amd_preprocess.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c amd_valid.c -o amd_valid.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c arpack.c -o arpack.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c array.c -o array.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c atlas.c -o atlas.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c attributes.c -o attributes.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c basic_query.c -o basic_query.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bfgs.c -o bfgs.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bigint.c -o bigint.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bignum.c -o bignum.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bipartite.c -o bipartite.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c blas.c -o blas.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bliss.cc -o bliss.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bliss_eqrefhash.cc -o bliss_eqrefhash.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bliss_graph.cc -o bliss_graph.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bliss_heap.cc -o bliss_heap.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bliss_orbit.cc -o bliss_orbit.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bliss_partition.cc -o bliss_partition.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bliss_timer.cc -o bliss_timer.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bliss_utils.cc -o bliss_utils.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cattributes.c -o cattributes.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c centrality.c -o centrality.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cliques.c -o cliques.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c clustertool.cpp -o clustertool.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cocitation.c -o cocitation.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cohesive_blocks.c -o cohesive_blocks.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c colamd.c -o colamd.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c community.c -o community.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c complex.c -o complex.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c components.c -o components.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c conversion.c -o conversion.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cores.c -o cores.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_add.c -o cs_add.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_amd.c -o cs_amd.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_chol.c -o cs_chol.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_cholsol.c -o cs_cholsol.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_compress.c -o cs_compress.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_counts.c -o cs_counts.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_cumsum.c -o cs_cumsum.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_dfs.c -o cs_dfs.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_dmperm.c -o cs_dmperm.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_droptol.c -o cs_droptol.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_dropzeros.c -o cs_dropzeros.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_dupl.c -o cs_dupl.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_entry.c -o cs_entry.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_ereach.c -o cs_ereach.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_etree.c -o cs_etree.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_fkeep.c -o cs_fkeep.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_gaxpy.c -o cs_gaxpy.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_happly.c -o cs_happly.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_house.c -o cs_house.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_ipvec.c -o cs_ipvec.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_leaf.c -o cs_leaf.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_load.c -o cs_load.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_lsolve.c -o cs_lsolve.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_ltsolve.c -o cs_ltsolve.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_lu.c -o cs_lu.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_lusol.c -o cs_lusol.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_malloc.c -o cs_malloc.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_maxtrans.c -o cs_maxtrans.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_multiply.c -o cs_multiply.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_norm.c -o cs_norm.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_permute.c -o cs_permute.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_pinv.c -o cs_pinv.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_post.c -o cs_post.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_print.c -o cs_print.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_pvec.c -o cs_pvec.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_qr.c -o cs_qr.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_qrsol.c -o cs_qrsol.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_randperm.c -o cs_randperm.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_reach.c -o cs_reach.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_scatter.c -o cs_scatter.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_scc.c -o cs_scc.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_schol.c -o cs_schol.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_spsolve.c -o cs_spsolve.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_sqr.c -o cs_sqr.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_symperm.c -o cs_symperm.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_tdfs.c -o cs_tdfs.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_transpose.c -o cs_transpose.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_updown.c -o cs_updown.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_usolve.c -o cs_usolve.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_util.c -o cs_util.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cs_utsolve.c -o cs_utsolve.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c decomposition.c -o decomposition.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dgetv0.f -o dgetv0.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c distances.c -o distances.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dlaqrb.f -o dlaqrb.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dmout.f -o dmout.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dnaitr.f -o dnaitr.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dnapps.f -o dnapps.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dnaup2.f -o dnaup2.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dnaupd.f -o dnaupd.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dnconv.f -o dnconv.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dneigh.f -o dneigh.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dneupd.f -o dneupd.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dngets.f -o dngets.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c dqueue.c -o dqueue.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c drl_graph.cpp -o drl_graph.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c drl_graph_3d.cpp -o drl_graph_3d.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c drl_layout.cpp -o drl_layout.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c drl_layout_3d.cpp -o drl_layout_3d.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c drl_parse.cpp -o drl_parse.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dsaitr.f -o dsaitr.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dsapps.f -o dsapps.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dsaup2.f -o dsaup2.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dsaupd.f -o dsaupd.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dsconv.f -o dsconv.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dseigt.f -o dseigt.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dsesrt.f -o dsesrt.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dseupd.f -o dseupd.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dsgets.f -o dsgets.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dsortc.f -o dsortc.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dsortr.f -o dsortr.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dstatn.f -o dstatn.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dstats.f -o dstats.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dstqrb.f -o dstqrb.o gfortran -fPIC -g -O2 -fstack-protector-strong -c dvout.f -o dvout.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c eigen.c -o eigen.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c error.c -o error.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c evolver_cit.c -o evolver_cit.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c f2c_dummy.c -o f2c_dummy.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c fast_community.c -o fast_community.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c feedback_arc_set.c -o feedback_arc_set.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c flow.c -o flow.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign-dl-lexer.c -o foreign-dl-lexer.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign-dl-parser.c -o foreign-dl-parser.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign-gml-lexer.c -o foreign-gml-lexer.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign-gml-parser.c -o foreign-gml-parser.o In file included from igraph/src/foreign-gml-parser.y:59:0: igraph_hacks_internal.h:42:0: warning: "strdup" redefined # define strdup igraph_i_strdup ^ In file included from /usr/include/string.h:634:0, from igraph/src/foreign-gml-parser.y:54: /usr/include/s390x-linux-gnu/bits/string2.h:1291:0: note: this is the location of the previous definition # define strdup(s) __strdup (s) ^ gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign-graphml.c -o foreign-graphml.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign-lgl-lexer.c -o foreign-lgl-lexer.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign-lgl-parser.c -o foreign-lgl-parser.o In file included from igraph/src/foreign-lgl-parser.y:54:0: igraph_hacks_internal.h:42:0: warning: "strdup" redefined # define strdup igraph_i_strdup ^ In file included from /usr/include/string.h:634:0, from igraph/src/foreign-lgl-parser.y:53: /usr/include/s390x-linux-gnu/bits/string2.h:1291:0: note: this is the location of the previous definition # define strdup(s) __strdup (s) ^ gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign-ncol-lexer.c -o foreign-ncol-lexer.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign-ncol-parser.c -o foreign-ncol-parser.o In file included from igraph/src/foreign-ncol-parser.y:54:0: igraph_hacks_internal.h:42:0: warning: "strdup" redefined # define strdup igraph_i_strdup ^ In file included from /usr/include/string.h:634:0, from igraph/src/foreign-ncol-parser.y:53: /usr/include/s390x-linux-gnu/bits/string2.h:1291:0: note: this is the location of the previous definition # define strdup(s) __strdup (s) ^ gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign-pajek-lexer.c -o foreign-pajek-lexer.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign-pajek-parser.c -o foreign-pajek-parser.o In file included from igraph/src/foreign-pajek-parser.y:54:0: igraph_hacks_internal.h:42:0: warning: "strdup" redefined # define strdup igraph_i_strdup ^ In file included from /usr/include/string.h:634:0, from igraph/src/foreign-pajek-parser.y:53: /usr/include/s390x-linux-gnu/bits/string2.h:1291:0: note: this is the location of the previous definition # define strdup(s) __strdup (s) ^ gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c foreign.c -o foreign.o foreign.c: In function 'igraph_i_gml_tostring': foreign.c:1044:10: warning: function may return address of local variable [-Wreturn-local-addr] return p; ^ foreign.c:1023:8: note: declared here char tmp[256]; ^ foreign.c:1044:10: warning: function may return address of local variable [-Wreturn-local-addr] return p; ^ foreign.c:1023:8: note: declared here char tmp[256]; ^ foreign.c:1044:10: warning: function may return address of local variable [-Wreturn-local-addr] return p; ^ foreign.c:1023:8: note: declared here char tmp[256]; ^ gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c forestfire.c -o forestfire.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c fortran_intrinsics.c -o fortran_intrinsics.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c games.c -o games.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c gengraph_box_list.cpp -o gengraph_box_list.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c gengraph_degree_sequence.cpp -o gengraph_degree_sequence.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c gengraph_graph_molloy_hash.cpp -o gengraph_graph_molloy_hash.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c gengraph_graph_molloy_optimized.cpp -o gengraph_graph_molloy_optimized.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c gengraph_mr-connected.cpp -o gengraph_mr-connected.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c gengraph_powerlaw.cpp -o gengraph_powerlaw.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c gengraph_random.cpp -o gengraph_random.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glet.c -o glet.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi01.c -o glpapi01.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi02.c -o glpapi02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi03.c -o glpapi03.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi04.c -o glpapi04.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi05.c -o glpapi05.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi06.c -o glpapi06.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi07.c -o glpapi07.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi08.c -o glpapi08.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi09.c -o glpapi09.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi10.c -o glpapi10.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi11.c -o glpapi11.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi12.c -o glpapi12.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi13.c -o glpapi13.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi14.c -o glpapi14.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi15.c -o glpapi15.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi16.c -o glpapi16.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi17.c -o glpapi17.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi18.c -o glpapi18.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpapi19.c -o glpapi19.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpavl.c -o glpavl.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpbfd.c -o glpbfd.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpbfx.c -o glpbfx.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpcpx.c -o glpcpx.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpdmp.c -o glpdmp.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpdmx.c -o glpdmx.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpenv01.c -o glpenv01.o In file included from glpenv01.c:31:0: glpenv01.c: In function '_glp_get_env_ptr': glpenv01.c:135:48: warning: return makes pointer from integer without a cast [-Wint-conversion] IGRAPH_ERROR("GLPK initialization failed", IGRAPH_EGLP); ^ igraph_error.h:425:15: note: in definition of macro 'IGRAPH_ERROR' return igraph_errno ; \ ^ glpenv01.c:143:43: warning: return makes pointer from integer without a cast [-Wint-conversion] IGRAPH_ERROR("Invalid GLPK environment", IGRAPH_EGLP); ^ igraph_error.h:425:15: note: in definition of macro 'IGRAPH_ERROR' return igraph_errno ; \ ^ gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpenv02.c -o glpenv02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpenv03.c -o glpenv03.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpenv04.c -o glpenv04.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpenv05.c -o glpenv05.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpenv06.c -o glpenv06.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpenv07.c -o glpenv07.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpenv08.c -o glpenv08.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpfhv.c -o glpfhv.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpgmp.c -o glpgmp.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glphbm.c -o glphbm.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpini01.c -o glpini01.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpini02.c -o glpini02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios01.c -o glpios01.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios02.c -o glpios02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios03.c -o glpios03.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios04.c -o glpios04.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios05.c -o glpios05.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios06.c -o glpios06.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios07.c -o glpios07.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios08.c -o glpios08.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios09.c -o glpios09.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios10.c -o glpios10.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios11.c -o glpios11.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpios12.c -o glpios12.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpipm.c -o glpipm.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpk_support.c -o glpk_support.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glplib01.c -o glplib01.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glplib02.c -o glplib02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glplib03.c -o glplib03.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glplpf.c -o glplpf.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glplpx01.c -o glplpx01.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glplpx02.c -o glplpx02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glplpx03.c -o glplpx03.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpluf.c -o glpluf.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glplux.c -o glplux.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpmat.c -o glpmat.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpmpl01.c -o glpmpl01.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpmpl02.c -o glpmpl02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpmpl03.c -o glpmpl03.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpmpl04.c -o glpmpl04.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpmpl05.c -o glpmpl05.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpmpl06.c -o glpmpl06.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpmps.c -o glpmps.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnet01.c -o glpnet01.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnet02.c -o glpnet02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnet03.c -o glpnet03.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnet04.c -o glpnet04.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnet05.c -o glpnet05.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnet06.c -o glpnet06.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnet07.c -o glpnet07.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnet08.c -o glpnet08.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnet09.c -o glpnet09.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnpp01.c -o glpnpp01.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnpp02.c -o glpnpp02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnpp03.c -o glpnpp03.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnpp04.c -o glpnpp04.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpnpp05.c -o glpnpp05.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpqmd.c -o glpqmd.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glprgr.c -o glprgr.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glprng01.c -o glprng01.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glprng02.c -o glprng02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpscf.c -o glpscf.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpscl.c -o glpscl.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpsdf.c -o glpsdf.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpspm.c -o glpspm.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpspx01.c -o glpspx01.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpspx02.c -o glpspx02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpsql.c -o glpsql.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpssx01.c -o glpssx01.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glpssx02.c -o glpssx02.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c glptsp.c -o glptsp.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c gml_tree.c -o gml_tree.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c gss.c -o gss.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c hacks.c -o hacks.o In file included from hacks.c:27:0: igraph_hacks_internal.h:42:0: warning: "strdup" redefined # define strdup igraph_i_strdup ^ In file included from /usr/include/string.h:634:0, from /usr/include/memory.h:29, from hacks.c:24: /usr/include/s390x-linux-gnu/bits/string2.h:1291:0: note: this is the location of the previous definition # define strdup(s) __strdup (s) ^ gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c heap.c -o heap.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_buckets.c -o igraph_buckets.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_error.c -o igraph_error.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_estack.c -o igraph_estack.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_fixed_vectorlist.c -o igraph_fixed_vectorlist.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_grid.c -o igraph_grid.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_hashtable.c -o igraph_hashtable.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_heap.c -o igraph_heap.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_hrg.cc -o igraph_hrg.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_hrg_types.cc -o igraph_hrg_types.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_marked_queue.c -o igraph_marked_queue.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_psumtree.c -o igraph_psumtree.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_set.c -o igraph_set.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_stack.c -o igraph_stack.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_strvector.c -o igraph_strvector.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c igraph_trie.c -o igraph_trie.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c infomap.cc -o infomap.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c infomap_FlowGraph.cc -o infomap_FlowGraph.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c infomap_Greedy.cc -o infomap_Greedy.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c infomap_Node.cc -o infomap_Node.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c interrupt.c -o interrupt.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c iterators.c -o iterators.o gfortran -fPIC -g -O2 -fstack-protector-strong -c ivout.f -o ivout.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c kolmogorov.c -o kolmogorov.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c lad.c -o lad.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c lapack.c -o lapack.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c layout.c -o layout.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c lbfgs.c -o lbfgs.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c matching.c -o matching.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c math.c -o math.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c matrix.c -o matrix.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c maximal_cliques.c -o maximal_cliques.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c memory.c -o memory.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c microscopic_update.c -o microscopic_update.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c mixing.c -o mixing.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c motifs.c -o motifs.o motifs.c: In function 'igraph_dyad_census': motifs.c:900:11: warning: overflow in implicit constant conversion [-Woverflow] *null = IGRAPH_NAN; ^ gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c operators.c -o operators.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c optimal_modularity.c -o optimal_modularity.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c options.c -o options.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c other.c -o other.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c plfit.c -o plfit.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c pottsmodel_2.cpp -o pottsmodel_2.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c progress.c -o progress.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c prpack.cpp -o prpack.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c prpack_base_graph.cpp -o prpack_base_graph.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c prpack_igraph_graph.cpp -o prpack_igraph_graph.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c prpack_preprocessed_ge_graph.cpp -o prpack_preprocessed_ge_graph.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c prpack_preprocessed_gs_graph.cpp -o prpack_preprocessed_gs_graph.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c prpack_preprocessed_scc_graph.cpp -o prpack_preprocessed_scc_graph.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c prpack_preprocessed_schur_graph.cpp -o prpack_preprocessed_schur_graph.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c prpack_result.cpp -o prpack_result.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c prpack_solver.cpp -o prpack_solver.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c prpack_utils.cpp -o prpack_utils.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c qsort.c -o qsort.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c qsort_r.c -o qsort_r.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c random.c -o random.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c revolver_cit.c -o revolver_cit.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c revolver_grow.c -o revolver_grow.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c revolver_ml_cit.c -o revolver_ml_cit.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c rinterface.c -o rinterface.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c rinterface_extra.c -o rinterface_extra.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c sbm.c -o sbm.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c scg.c -o scg.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c scg_approximate_methods.c -o scg_approximate_methods.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c scg_exact_scg.c -o scg_exact_scg.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c scg_kmeans.c -o scg_kmeans.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c scg_optimal_method.c -o scg_optimal_method.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c scg_utils.c -o scg_utils.o gfortran -fPIC -g -O2 -fstack-protector-strong -c second.f -o second.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c separators.c -o separators.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c sir.c -o sir.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c spanning_trees.c -o spanning_trees.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c sparsemat.c -o sparsemat.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c spectral_properties.c -o spectral_properties.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c spmatrix.c -o spmatrix.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c st-cuts.c -o st-cuts.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c statusbar.c -o statusbar.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c structural_properties.c -o structural_properties.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c structure_generators.c -o structure_generators.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c sugiyama.c -o sugiyama.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c topology.c -o topology.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c triangles.c -o triangles.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c type_indexededgelist.c -o type_indexededgelist.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c types.c -o types.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c unit_limiter.cpp -o unit_limiter.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c vector.c -o vector.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c vector_ptr.c -o vector_ptr.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c version.c -o version.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c visitors.c -o visitors.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c walktrap.cpp -o walktrap.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c walktrap_communities.cpp -o walktrap_communities.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c walktrap_graph.cpp -o walktrap_graph.o g++ -I/usr/share/R/include -DNDEBUG -DUSING_R -DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -DPRPACK_IGRAPH_SUPPORT -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c walktrap_heap.cpp -o walktrap_heap.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c zeroin.c -o zeroin.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -Iplfit -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -DNDEBUG -DPACKAGE_VERSION=\"@VERSION@\" -DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c zeta.c -o zeta.o g++ -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o igraph.so Color.o DensityGrid.o DensityGrid_3d.o Light.o NetDataTypes.o NetRoutines.o Point.o RIgraphRay.o Ray.o RayTracer.o RayVector.o Shape.o Sphere.o Triangle.o adjlist.o amd_1.o amd_2.o amd_aat.o amd_control.o amd_defaults.o amd_dump.o amd_info.o amd_order.o amd_post_tree.o amd_postorder.o amd_preprocess.o amd_valid.o arpack.o array.o atlas.o attributes.o basic_query.o bfgs.o bigint.o bignum.o bipartite.o blas.o bliss.o bliss_eqrefhash.o bliss_graph.o bliss_heap.o bliss_orbit.o bliss_partition.o bliss_timer.o bliss_utils.o cattributes.o centrality.o cliques.o clustertool.o cocitation.o cohesive_blocks.o colamd.o community.o complex.o components.o conversion.o cores.o cs_add.o cs_amd.o cs_chol.o cs_cholsol.o cs_compress.o cs_counts.o cs_cumsum.o cs_dfs.o cs_dmperm.o cs_droptol.o cs_dropzeros.o cs_dupl.o cs_entry.o cs_ereach.o cs_etree.o cs_fkeep.o cs_gaxpy.o cs_happly.o cs_house.o cs_ipvec.o cs_leaf.o cs_load.o cs_lsolve.o cs_ltsolve.o cs_lu.o cs_lusol.o cs_malloc.o cs_maxtrans.o cs_multiply.o cs_norm.o cs_permute.o cs_pinv.o cs_post.o cs_print.o cs_pvec.o cs_qr.o cs_qrsol.o cs_randperm.o cs_reach.o cs_scatter.o cs_scc.o cs_schol.o cs_spsolve.o cs_sqr.o cs_symperm.o cs_tdfs.o cs_transpose.o cs_updown.o cs_usolve.o cs_util.o cs_utsolve.o decomposition.o dgetv0.o distances.o dlaqrb.o dmout.o dnaitr.o dnapps.o dnaup2.o dnaupd.o dnconv.o dneigh.o dneupd.o dngets.o dqueue.o drl_graph.o drl_graph_3d.o drl_layout.o drl_layout_3d.o drl_parse.o dsaitr.o dsapps.o dsaup2.o dsaupd.o dsconv.o dseigt.o dsesrt.o dseupd.o dsgets.o dsortc.o dsortr.o dstatn.o dstats.o dstqrb.o dvout.o eigen.o error.o evolver_cit.o f2c_dummy.o fast_community.o feedback_arc_set.o flow.o foreign-dl-lexer.o foreign-dl-parser.o foreign-gml-lexer.o foreign-gml-parser.o foreign-graphml.o foreign-lgl-lexer.o foreign-lgl-parser.o foreign-ncol-lexer.o foreign-ncol-parser.o foreign-pajek-lexer.o foreign-pajek-parser.o foreign.o forestfire.o fortran_intrinsics.o games.o gengraph_box_list.o gengraph_degree_sequence.o gengraph_graph_molloy_hash.o gengraph_graph_molloy_optimized.o gengraph_mr-connected.o gengraph_powerlaw.o gengraph_random.o glet.o glpapi01.o glpapi02.o glpapi03.o glpapi04.o glpapi05.o glpapi06.o glpapi07.o glpapi08.o glpapi09.o glpapi10.o glpapi11.o glpapi12.o glpapi13.o glpapi14.o glpapi15.o glpapi16.o glpapi17.o glpapi18.o glpapi19.o glpavl.o glpbfd.o glpbfx.o glpcpx.o glpdmp.o glpdmx.o glpenv01.o glpenv02.o glpenv03.o glpenv04.o glpenv05.o glpenv06.o glpenv07.o glpenv08.o glpfhv.o glpgmp.o glphbm.o glpini01.o glpini02.o glpios01.o glpios02.o glpios03.o glpios04.o glpios05.o glpios06.o glpios07.o glpios08.o glpios09.o glpios10.o glpios11.o glpios12.o glpipm.o glpk_support.o glplib01.o glplib02.o glplib03.o glplpf.o glplpx01.o glplpx02.o glplpx03.o glpluf.o glplux.o glpmat.o glpmpl01.o glpmpl02.o glpmpl03.o glpmpl04.o glpmpl05.o glpmpl06.o glpmps.o glpnet01.o glpnet02.o glpnet03.o glpnet04.o glpnet05.o glpnet06.o glpnet07.o glpnet08.o glpnet09.o glpnpp01.o glpnpp02.o glpnpp03.o glpnpp04.o glpnpp05.o glpqmd.o glprgr.o glprng01.o glprng02.o glpscf.o glpscl.o glpsdf.o glpspm.o glpspx01.o glpspx02.o glpsql.o glpssx01.o glpssx02.o glptsp.o gml_tree.o gss.o hacks.o heap.o igraph_buckets.o igraph_error.o igraph_estack.o igraph_fixed_vectorlist.o igraph_grid.o igraph_hashtable.o igraph_heap.o igraph_hrg.o igraph_hrg_types.o igraph_marked_queue.o igraph_psumtree.o igraph_set.o igraph_stack.o igraph_strvector.o igraph_trie.o infomap.o infomap_FlowGraph.o infomap_Greedy.o infomap_Node.o interrupt.o iterators.o ivout.o kolmogorov.o lad.o lapack.o layout.o lbfgs.o matching.o math.o matrix.o maximal_cliques.o memory.o microscopic_update.o mixing.o motifs.o operators.o optimal_modularity.o options.o other.o plfit.o pottsmodel_2.o progress.o prpack.o prpack_base_graph.o prpack_igraph_graph.o prpack_preprocessed_ge_graph.o prpack_preprocessed_gs_graph.o prpack_preprocessed_scc_graph.o prpack_preprocessed_schur_graph.o prpack_result.o prpack_solver.o prpack_utils.o qsort.o qsort_r.o random.o revolver_cit.o revolver_grow.o revolver_ml_cit.o rinterface.o rinterface_extra.o sbm.o scg.o scg_approximate_methods.o scg_exact_scg.o scg_kmeans.o scg_optimal_method.o scg_utils.o second.o separators.o sir.o spanning_trees.o sparsemat.o spectral_properties.o spmatrix.o st-cuts.o statusbar.o structural_properties.o structure_generators.o sugiyama.o topology.o triangles.o type_indexededgelist.o types.o unit_limiter.o vector.o vector_ptr.o version.o visitors.o walktrap.o walktrap_communities.o walktrap_graph.o walktrap_heap.o zeroin.o zeta.o -lgfortran -lm -llapack -lblas -lgfortran -lm -L/usr/lib/R/lib -lR make[1]: Leaving directory '/<>/src' make[1]: Entering directory '/<>/src' make[1]: Leaving directory '/<>/src' installing to /<>/debian/r-cran-igraph/usr/lib/R/site-library/igraph/libs ** R ** demo ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (igraph) rm -vf /<>/debian/r-cran-igraph/usr/lib/R/site-library/R.css \ /<>/debian/r-cran-igraph/usr/lib/R/site-library/igraph/COPYING \ /<>/debian/r-cran-igraph/usr/lib/R/site-library/igraph/LICENSE.txt if test -f debian/overrides; then \ install -d /<>/debian/r-cran-igraph/usr/share/lintian/overrides ; \ install -m 0644 debian/overrides \ /<>/debian/r-cran-igraph/usr/share/lintian/overrides/r-cran-igraph; \ fi Adding cdbs dependencies to debian/r-cran-igraph.substvars dh_installdirs -pr-cran-igraph rm -f debian/r-cran-igraph/usr/lib/R/site-library/igraph/LICENSE rm -f debian/r-cran-igraph/usr/lib/R/site-library/igraph/html_library.license.terms mkdir -p debian/r-cran-igraph/usr/share/pixmaps/igraph mv debian/r-cran-igraph/usr/lib/R/site-library/igraph/*.gif debian/r-cran-igraph/usr/share/pixmaps/igraph/ mv debian/r-cran-igraph/usr/lib/R/site-library/igraph/tkigraph_help/*.gif debian/r-cran-igraph/usr/share/pixmaps/igraph/ dh_installchangelogs -k NEWS dh_installdocs -pr-cran-igraph ./NEWS ./AUTHORS dh_installexamples -pr-cran-igraph dh_installman -pr-cran-igraph dh_installinfo -pr-cran-igraph dh_installmenu -pr-cran-igraph dh_installcron -pr-cran-igraph dh_installinit -pr-cran-igraph dh_installdebconf -pr-cran-igraph dh_installemacsen -pr-cran-igraph dh_installcatalogs -pr-cran-igraph dh_installpam -pr-cran-igraph dh_installlogrotate -pr-cran-igraph dh_installlogcheck -pr-cran-igraph dh_installchangelogs -pr-cran-igraph dh_installudev -pr-cran-igraph dh_lintian -pr-cran-igraph dh_bugfiles -pr-cran-igraph dh_install -pr-cran-igraph dh_link -pr-cran-igraph dh_installmime -pr-cran-igraph dh_installgsettings -pr-cran-igraph dh_strip -pr-cran-igraph dh_strip debug symbol extraction: enabling -a due to Build-Debug-Symbols: yes in /CurrentlyBuilding dh_strip debug symbol extraction: all non-arch-all packages for this build platform s390x: r-cran-igraph dh_strip debug symbol extraction: packages to act on: r-cran-igraph dh_strip debug symbol extraction: ignored packages: Using buildid for compat level >= 9 dpkg-gencontrol: warning: -is is deprecated; it is without effect dpkg-gencontrol: warning: -ip is deprecated; it is without effect dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package r-cran-igraph: unused substitution variable ${R:Depends} /usr/bin/pkg_create_dbgsym: deferring build of .ddeb to dh_gencontrol dh_compress -pr-cran-igraph dh_fixperms -pr-cran-igraph dh_makeshlibs -pr-cran-igraph dh_installdeb -pr-cran-igraph dh_perl -pr-cran-igraph dh_shlibdeps -pr-cran-igraph dh_gencontrol -pr-cran-igraph dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dh_gencontrol debug symbol wrapper: all non-arch-all packages for this build platform s390x: r-cran-igraph dh_gencontrol debug symbol wrapper: packages to act on: r-cran-igraph dh_gencontrol debug symbol wrapper: ignored packages: dh_gencontrol debug symbol wrapper: processing package r-cran-igraph (pkgdir debian/r-cran-igraph, ddeb package dir debian/r-cran-igraph-dbgsym) dh_gencontrol debug symbol wrapper: building r-cran-igraph-dbgsym_0.7.1-1_s390x.ddeb dpkg-deb: building package 'r-cran-igraph-dbgsym' in '../r-cran-igraph-dbgsym_0.7.1-1_s390x.ddeb'. dh_gencontrol debug symbol wrapper: dpkg-distaddfile r-cran-igraph-dbgsym_0.7.1-1_s390x.ddeb gnu-r extra dpkg-distaddfile: warning: File::FcntlLock not available; using flock which is not NFS-safe # only call dh_scour for packages in main if grep -q '^Component:[[:space:]]*main' /CurrentlyBuilding 2>/dev/null; then dh_scour -pr-cran-igraph ; fi dh_md5sums -pr-cran-igraph dh_builddeb -pr-cran-igraph INFO: pkgstriptranslations version 123 pkgstriptranslations: processing r-cran-igraph (in debian/r-cran-igraph); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/r-cran-igraph/DEBIAN/control, package r-cran-igraph, directory debian/r-cran-igraph .. removing usr/share/doc/r-cran-igraph/changelog.gz pkgstripfiles: Running PNG optimization (using 4 cpus) for package r-cran-igraph ... pkgstripfiles: No PNG files. dpkg-deb: building package 'r-cran-igraph' in '../r-cran-igraph_0.7.1-1_s390x.deb'. dpkg-genchanges -B -mLaunchpad Build Daemon >../r-cran-igraph_0.7.1-1_s390x.changes dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build r-cran-igraph-0.7.1 dpkg-buildpackage: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20151205-1259 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ r-cran-igraph_0.7.1-1_s390x.changes: ------------------------------------ Format: 1.8 Date: Thu, 25 Sep 2014 18:00:25 +0200 Source: r-cran-igraph Binary: r-cran-igraph Architecture: s390x Version: 0.7.1-1 Distribution: xenial Urgency: low Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: r-cran-igraph - GNU R network analysis and visualization Closes: 546936 Changes: r-cran-igraph (0.7.1-1) unstable; urgency=low . * Initial release (closes: #546936). Checksums-Sha1: 1b866c0e3c16a1f66d4ae5d7e5b21a5d97f54b5c 2426344 r-cran-igraph-dbgsym_0.7.1-1_s390x.ddeb 95d2c7dc17f853d6f26f8b0eedf099b4caaac4e9 2431898 r-cran-igraph_0.7.1-1_s390x.deb Checksums-Sha256: 74926987dea9387df8c4bde5c3084f08c06353d3998ed6acb8aa937590d1051b 2426344 r-cran-igraph-dbgsym_0.7.1-1_s390x.ddeb 8b0ce2e7fc7b310fb4c33029286054cbb28c6f50c288f3b1fc84acaa507eb58a 2431898 r-cran-igraph_0.7.1-1_s390x.deb Files: 05f65845b5b85c34f39b5c70d1a0a4fc 2426344 gnu-r extra r-cran-igraph-dbgsym_0.7.1-1_s390x.ddeb 4b48f658171f4faffe292fc23460085f 2431898 gnu-r optional r-cran-igraph_0.7.1-1_s390x.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ r-cran-igraph_0.7.1-1_s390x.deb ------------------------------- new debian package, version 2.0. size 2431898 bytes: control archive=5465 bytes. 827 bytes, 15 lines control 14305 bytes, 163 lines md5sums Package: r-cran-igraph Version: 0.7.1-1 Architecture: s390x Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 5515 Depends: libblas3 | libblas.so.3, libc6 (>= 2.11), libgcc1 (>= 1:4.1.1), libgfortran3 (>= 4.3), liblapack3 | liblapack.so.3, libstdc++6 (>= 5.2), r-base-core (>= 3.2.2-1), r-api-3, r-cran-matrix Section: gnu-r Priority: optional Homepage: http://cran.r-project.org/web/packages/igraph/ Description: GNU R network analysis and visualization This GNU R package provides routines for simple graphs and network analysis. igraph can handle large graphs very well and provides functions for generating random and regular graphs, graph visualization, centrality indices and much more. drwxr-xr-x root/root 0 2015-12-05 12:59 ./ drwxr-xr-x root/root 0 2015-12-05 12:59 ./usr/ drwxr-xr-x root/root 0 2015-12-05 12:57 ./usr/lib/ drwxr-xr-x root/root 0 2015-12-05 12:57 ./usr/lib/R/ drwxr-xr-x root/root 0 2015-12-05 12:59 ./usr/lib/R/site-library/ 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./usr/share/doc/r-cran-igraph/changelog.Debian.gz -rw-r--r-- root/root 8857 2015-06-07 07:01 ./usr/share/doc/r-cran-igraph/copyright drwxr-xr-x root/root 0 2015-12-05 12:59 ./usr/share/pixmaps/ drwxr-xr-x root/root 0 2015-12-05 12:59 ./usr/share/pixmaps/igraph/ -rw-r--r-- root/root 2033 2015-12-05 12:58 ./usr/share/pixmaps/igraph/igraph.gif -rw-r--r-- root/root 1623 2015-12-05 12:58 ./usr/share/pixmaps/igraph/igraph2.gif -rw-r--r-- root/root 14667 2015-12-05 12:58 ./usr/share/pixmaps/igraph/tkigraph-main.gif +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Not removing build depends: as requested Keeping session: +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: s390x Build-Space: 25144 Build-Time: 118 Distribution: xenial Host Architecture: s390x Install-Time: 74 Job: r-cran-igraph_0.7.1-1.dsc Machine Architecture: s390x Package: r-cran-igraph Package-Time: 192 Source-Version: 0.7.1-1 Space: 25144 Status: successful Version: 0.7.1-1 -------------------------------------------------------------------------------- Finished at 20151205-1259 Build needed 00:03:12, 25144k disc space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-8381149'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-8381149/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-8381149'] Unmounting chroot for build PACKAGEBUILD-8381149... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-8381149'] Removing build PACKAGEBUILD-8381149