RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '288158-552821', '/home/buildd/filecache-default/b5b2bf47f3519fb3d9e270c2a92d3d904d295c1e'] Unpacking chroot for build 288158-552821 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '288158-552821'] Mounting chroot for build 288158-552821 RUN: /usr/share/launchpad-buildd/slavebin/apply-ogre-model ['apply-ogre-model', '288158-552821', 'universe'] Attempting OGRE for universe in build-288158-552821 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '288158-552821'] Updating debian chroot for build 288158-552821 Get:1 http://ftpmaster.internal feisty Release.gpg [191B] Get:2 http://ftpmaster.internal feisty Release [34.8kB] Get:3 http://ftpmaster.internal feisty/main Packages [969kB] Get:4 http://ftpmaster.internal feisty/universe Packages [3720kB] Fetched 4724kB in 4s (1058kB/s) Reading package lists... Reading package lists... Building dependency tree... The following packages will be upgraded: apt libacl1 libattr1 libc6 libc6-dev libpam-modules libpam-runtime libpam0g linux-libc-dev locales login passwd pkg-create-dbgsym pkgbinarymangler python2.4-minimal startup-tasks system-services tar upstart upstart-compat-sysv 20 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 0B/15.1MB of archives. After unpacking 28.7kB of additional disk space will be used. (Reading database ... 8756 files and directories currently installed.) Preparing to replace linux-libc-dev 2.6.19-7.11 (using .../linux-libc-dev_2.6.20-2.2_i386.deb) ... Unpacking replacement linux-libc-dev ... Preparing to replace libc6-dev 2.5-0ubuntu4 (using .../libc6-dev_2.5-0ubuntu5_i386.deb) ... Unpacking replacement libc6-dev ... Preparing to replace locales 2.3.22 (using .../locales_2.3.23_all.deb) ... Unpacking replacement locales ... Preparing to replace libc6 2.5-0ubuntu4 (using .../libc6_2.5-0ubuntu5_i386.deb) ... Unpacking replacement libc6 ... Setting up locales (2.3.23) ... Setting up libc6 (2.5-0ubuntu5) ... (Reading database ... 8749 files and directories currently installed.) Preparing to replace libpam-runtime 0.79-3.1ubuntu1 (using .../libpam-runtime_0.79-4ubuntu1_all.deb) ... Unpacking replacement libpam-runtime ... Setting up libpam-runtime (0.79-4ubuntu1) ... (Reading database ... 8749 files and directories currently installed.) Preparing to replace libpam0g 0.79-3.1ubuntu1 (using .../libpam0g_0.79-4ubuntu1_i386.deb) ... Unpacking replacement libpam0g ... Setting up libpam0g (0.79-4ubuntu1) ... (Reading database ... 8749 files and directories currently installed.) Preparing to replace libpam-modules 0.79-3.1ubuntu1 (using .../libpam-modules_0.79-4ubuntu1_i386.deb) ... Unpacking replacement libpam-modules ... Setting up libpam-modules (0.79-4ubuntu1) ... Installing new version of config file /etc/security/limits.conf ... (Reading database ... 8749 files and directories currently installed.) Preparing to replace login 1:4.0.18.1-5ubuntu1 (using .../login_1%3a4.0.18.1-6ubuntu1_i386.deb) ... Unpacking replacement login ... Setting up login (4.0.18.1-6ubuntu1) ... (Reading database ... 8749 files and directories currently installed.) Preparing to replace tar 1.16-1ubuntu1 (using .../archives/tar_1.16-2_i386.deb) ... Unpacking replacement tar ... Setting up tar (1.16-2) ... (Reading database ... 8749 files and directories currently installed.) Preparing to replace upstart-compat-sysv 0.2.7-7 (using .../upstart-compat-sysv_0.3.1-1_i386.deb) ... Unpacking replacement upstart-compat-sysv ... Replacing files in old package upstart ... Preparing to replace upstart 0.2.7-7 (using .../upstart_0.3.1-1_i386.deb) ... Unpacking replacement upstart ... Preparing to replace apt 0.6.46.4ubuntu2 (using .../apt_0.6.46.4ubuntu4_i386.deb) ... Unpacking replacement apt ... Setting up apt (0.6.46.4ubuntu4) ... (Reading database ... 8750 files and directories currently installed.) Preparing to replace libattr1 2.4.32-1ubuntu1 (using .../libattr1_1%3a2.4.32-1.1ubuntu1_i386.deb) ... Unpacking replacement libattr1 ... Preparing to replace libacl1 2.2.39-1ubuntu2 (using .../libacl1_2.2.42-1ubuntu1_i386.deb) ... Unpacking replacement libacl1 ... Setting up libattr1 (2.4.32-1.1ubuntu1) ... Setting up libacl1 (2.2.42-1ubuntu1) ... (Reading database ... 8750 files and directories currently installed.) Preparing to replace python2.4-minimal 2.4.4-1ubuntu1 (using .../python2.4-minimal_2.4.4-1ubuntu2_i386.deb) ... Unpacking replacement python2.4-minimal ... Setting up python2.4-minimal (2.4.4-1ubuntu2) ... Installing new version of config file /etc/python2.4/site.py ... (Reading database ... 8750 files and directories currently installed.) Preparing to replace passwd 1:4.0.18.1-5ubuntu1 (using .../passwd_1%3a4.0.18.1-6ubuntu1_i386.deb) ... Unpacking replacement passwd ... Preparing to replace startup-tasks 0.2.7-7 (using .../startup-tasks_0.3.1-1_i386.deb) ... Unpacking replacement startup-tasks ... Preparing to replace system-services 0.2.7-7 (using .../system-services_0.3.1-1_i386.deb) ... Unpacking replacement system-services ... Preparing to replace pkg-create-dbgsym 0.16 (using .../pkg-create-dbgsym_0.18_all.deb) ... Unpacking replacement pkg-create-dbgsym ... Preparing to replace pkgbinarymangler 34 (using .../pkgbinarymangler_35_all.deb) ... Unpacking replacement pkgbinarymangler ... Setting up linux-libc-dev (2.6.20-2.2) ... Setting up libc6-dev (2.5-0ubuntu5) ... Setting up upstart (0.3.1-1) ... Setting up upstart-compat-sysv (0.3.1-1) ... Setting up passwd (4.0.18.1-6ubuntu1) ... Setting up startup-tasks (0.3.1-1) ... Setting up system-services (0.3.1-1) ... Setting up pkg-create-dbgsym (0.18) ... Setting up pkgbinarymangler (35) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '288158-552821', '-dautobuild', '--nolog', '--batch', '--archive=ubuntu', '-A', '--comp=universe', 'rmatrix_0.9975-7-1.dsc'] Initiating build Automatic build of rmatrix_0.9975-7-1 on vernadsky by sbuild/i386 1.170.5 Build started at 20061220-1612 ****************************************************************************** rmatrix_0.9975-7-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>> 4.1.0), cdbs, r-base-dev (>= 2.4.0), r-cran-lattice (>= 0.12-11.1) Checking for already installed source dependencies... debhelper: missing cdbs: missing r-base-dev: missing r-cran-lattice: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper cdbs r-base-dev r-cran-lattice Reading package lists... Building dependency tree... The following extra packages will be installed: atlas3-base cpp-3.4 file g77 g77-3.4 gcc-3.4 gcc-3.4-base gettext gettext-base gfortran gfortran-4.1 html2text intltool-debian libbz2-1.0 libbz2-dev libg2c0 libg2c0-dev libgfortran1 libgfortran1-dev libgmp3c2 libice6 libjpeg62 libjpeg62-dev libmagic1 libmpfr1 libncurses5-dev libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpng12-0 libpng12-dev libreadline5 libreadline5-dev libsm6 libx11-6 libx11-data libxau6 libxdmcp6 libxt6 po-debconf r-base-core readline-common refblas3 refblas3-dev tcl8.4 tk8.4 ucf x11-common zlib-bin zlib1g-dev Suggested packages: atlas3-3dnow atlas3-sse atlas3-sse2 lapack3 devscripts doc-base dh-make g77-doc g77-3.4-doc gcc-3.4-doc libc6-dev-amd64 lib64gcc1 cvs gettext-doc gfortran-doc gfortran-4.1-doc lib64gfortran1 ess r-doc-info r-doc-pdf r-doc-html r-mathlib r-base-html r-base-latex tclreadline Recommended packages: autotools-dev curl wget lynx libmail-sendmail-perl libcompress-zlib-perl r-recommended xterm x-terminal-emulator debconf-utils The following NEW packages will be installed: atlas3-base cdbs cpp-3.4 debhelper file g77 g77-3.4 gcc-3.4 gcc-3.4-base gettext gettext-base gfortran gfortran-4.1 html2text intltool-debian libbz2-1.0 libbz2-dev libg2c0 libg2c0-dev libgfortran1 libgfortran1-dev libgmp3c2 libice6 libjpeg62 libjpeg62-dev libmagic1 libmpfr1 libncurses5-dev libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpng12-0 libpng12-dev libreadline5 libreadline5-dev libsm6 libx11-6 libx11-data libxau6 libxdmcp6 libxt6 po-debconf r-base-core r-base-dev r-cran-lattice readline-common refblas3 refblas3-dev tcl8.4 tk8.4 ucf x11-common zlib-bin zlib1g-dev 0 upgraded, 56 newly installed, 0 to remove and 0 not upgraded. Need to get 17.4MB/34.8MB of archives. After unpacking 111MB of additional disk space will be used. Get:1 http://ftpmaster.internal feisty/main readline-common 5.2-2 [50.6kB] Get:2 http://ftpmaster.internal feisty/main libreadline5 5.2-2 [129kB] Get:3 http://ftpmaster.internal feisty/universe atlas3-base 3.6.0-20.2build1 [6193kB] Get:4 http://ftpmaster.internal feisty/main libreadline5-dev 5.2-2 [221kB] Get:5 http://ftpmaster.internal feisty/universe zlib-bin 1:1.2.3-13ubuntu3 [30.0kB] Get:6 http://ftpmaster.internal feisty/main refblas3 1.2-8ubuntu1 [204kB] Get:7 http://ftpmaster.internal feisty/universe r-base-core 2.4.1~20061205-1 [9855kB] Get:8 http://ftpmaster.internal feisty/main refblas3-dev 1.2-8ubuntu1 [197kB] Get:9 http://ftpmaster.internal feisty/universe r-base-dev 2.4.1~20061205-1 [2524B] Get:10 http://ftpmaster.internal feisty/universe r-cran-lattice 0.14-16-1 [522kB] Fetched 17.4MB in 0s (22.8MB/s) Selecting previously deselected package x11-common. (Reading database ... 8747 files and directories currently installed.) Unpacking x11-common (from .../x11-common_1%3a7.1.1ubuntu6_i386.deb) ... Selecting previously deselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.1-2_i386.deb) ... Selecting previously deselected package libxdmcp6. Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.0.1-2_i386.deb) ... Setting up x11-common (7.1.1ubuntu6) ... Adding system startup for /etc/init.d/x11-common ... /etc/rcS.d/S70x11-common -> ../init.d/x11-common Selecting previously deselected package libx11-data. (Reading database ... 8785 files and directories currently installed.) Unpacking libx11-data (from .../libx11-data_2%3a1.0.3-0ubuntu5_all.deb) ... Selecting previously deselected package libx11-6. Unpacking libx11-6 (from .../libx11-6_2%3a1.0.3-0ubuntu5_i386.deb) ... Selecting previously deselected package libice6. Unpacking libice6 (from .../libice6_2%3a1.0.1-2ubuntu1_i386.deb) ... 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Selecting previously deselected package debhelper. Unpacking debhelper (from .../debhelper_5.0.42ubuntu1_all.deb) ... Selecting previously deselected package gcc-3.4. Unpacking gcc-3.4 (from .../gcc-3.4_3.4.6-4_i386.deb) ... Selecting previously deselected package libg2c0-dev. Unpacking libg2c0-dev (from .../libg2c0-dev_1%3a3.4.6-4_i386.deb) ... Selecting previously deselected package g77-3.4. Unpacking g77-3.4 (from .../g77-3.4_3.4.6-4_i386.deb) ... Selecting previously deselected package g77. Unpacking g77 (from .../g77_4%3a3.4.6-18ubuntu1_i386.deb) ... Selecting previously deselected package libgfortran1. Unpacking libgfortran1 (from .../libgfortran1_4.1.1-21ubuntu2_i386.deb) ... Selecting previously deselected package libgfortran1-dev. Unpacking libgfortran1-dev (from .../libgfortran1-dev_4.1.1-21ubuntu2_i386.deb) ... Selecting previously deselected package libgmp3c2. Unpacking libgmp3c2 (from .../libgmp3c2_2%3a4.2.1+dfsg-4_i386.deb) ... 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Unpacking r-base-dev (from .../r-base-dev_2.4.1~20061205-1_all.deb) ... Selecting previously deselected package r-cran-lattice. Unpacking r-cran-lattice (from .../r-cran-lattice_0.14-16-1_i386.deb) ... Setting up libxau6 (1.0.1-2) ... Setting up libxdmcp6 (1.0.1-2) ... Setting up libx11-data (1.0.3-0ubuntu5) ... Setting up libx11-6 (1.0.3-0ubuntu5) ... Setting up libice6 (1.0.1-2ubuntu1) ... Setting up libsm6 (1.0.1-1ubuntu1) ... Setting up libxt6 (1.0.2-2) ... Setting up gettext-base (0.16.1-1ubuntu1) ... Setting up libbz2-1.0 (1.0.3-6) ... Setting up readline-common (5.2-2) ... Setting up libreadline5 (5.2-2) ... Setting up libmagic1 (4.17-5) ... Setting up file (4.17-5) ... Setting up gcc-3.4-base (3.4.6-4) ... Setting up libg2c0 (3.4.6-4) ... Setting up atlas3-base (3.6.0-20.2build1) ... Setting up cdbs (0.4.46ubuntu7) ... Setting up cpp-3.4 (3.4.6-4) ... Setting up html2text (1.3.2a-3) ... Setting up gettext (0.16.1-1ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.8) ... Setting up debhelper (5.0.42ubuntu1) ... Setting up gcc-3.4 (3.4.6-4) ... Setting up libg2c0-dev (3.4.6-4) ... Setting up g77-3.4 (3.4.6-4) ... Setting up g77 (3.4.6-18ubuntu1) ... Setting up libgfortran1 (4.1.1-21ubuntu2) ... Setting up libgfortran1-dev (4.1.1-21ubuntu2) ... Setting up libgmp3c2 (4.2.1+dfsg-4) ... Setting up libmpfr1 (2.2.1.dfsg.1-1) ... Setting up gfortran-4.1 (4.1.1-21ubuntu2) ... Setting up gfortran (4.1.1-14ubuntu1) ... Setting up libbz2-dev (1.0.3-6) ... Setting up libjpeg62 (6b-13) ... Setting up libjpeg62-dev (6b-13) ... Setting up libncurses5-dev (5.5-5ubuntu1) ... Setting up ucf (2.0017) ... Setting up libpaper1 (1.1.21) ... Creating config file /etc/papersize with new version Setting up libpaper-utils (1.1.21) ... Setting up libpcre3 (6.7-1ubuntu1) ... Setting up libpcrecpp0 (6.7-1ubuntu1) ... Setting up libpcre3-dev (6.7-1ubuntu1) ... Setting up libpng12-0 (1.2.15~beta5-1) ... Setting up zlib1g-dev (1.2.3-13ubuntu3) ... Setting up libpng12-dev (1.2.15~beta5-1) ... Setting up libreadline5-dev (5.2-2) ... Setting up zlib-bin (1.2.3-13ubuntu3) ... Setting up refblas3 (1.2-8ubuntu1) ... Setting up tcl8.4 (8.4.12-1.1) ... Setting up tk8.4 (8.4.12-1) ... Setting up r-base-core (2.4.1~20061205-1) ... Setting R_PAPERSIZE_USER default to 'a4' Setting up refblas3-dev (1.2-8ubuntu1) ... Setting up r-base-dev (2.4.1~20061205-1) ... Setting up r-cran-lattice (0.14-16-1) ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.5-0ubuntu5 make_3.81-3 dpkg-dev_1.13.24ubuntu1 gcc-4.1_4.1.1-21ubuntu2 g++-4.1_4.1.1-21ubuntu2 binutils_2.17.50.0.6-0ubuntu1 libstdc++6-4.1-dev_4.1.1-21ubuntu2 libstdc++6_4.1.1-21ubuntu2 ------------------------------------------------------------------------------ dpkg-source: extracting rmatrix in rmatrix-0.9975-7 dpkg-source: unpacking rmatrix_0.9975-7.orig.tar.gz dpkg-source: applying /home/buildd/build-288158-552821/rmatrix_0.9975-7-1.diff.gz dpkg-buildpackage: source package is rmatrix dpkg-buildpackage: source version is 0.9975-7-1 dpkg-buildpackage: host architecture i386 dpkg-buildpackage: source version without epoch 0.9975-7-1 /usr/bin/fakeroot debian/rules clean test -x debian/rules test "`id -u`" = 0 dh_clean dh_clean: Compatibility levels before 4 are deprecated. debian/rules build test -x debian/rules mkdir -p "." echo 5 >debian/compat /usr/bin/fakeroot debian/rules binary test -x debian/rules test "`id -u`" = 0 dh_clean -k dh_installdirs -A mkdir -p "." dh_installdirs usr/lib/R/site-library R CMD INSTALL -l /build/buildd/rmatrix-0.9975-7/debian/r-cran-matrix/usr/lib/R/site-library --clean . * Installing *source* package 'Matrix' ... ** libs ** arch - make[1]: Entering directory `/build/buildd/rmatrix-0.9975-7/src' gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c CHMfactor.c -o CHMfactor.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c Csparse.c -o Csparse.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c HBMM.c -o HBMM.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c Tsparse.c -o Tsparse.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c init.c -o init.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c Mutils.c -o Mutils.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c chm_common.c -o chm_common.o chm_common.c: In function 'R_cholmod_start': chm_common.c:382: warning: assignment from incompatible pointer type gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c cs.c -o cs.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c cs_utils.c -o cs_utils.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dense.c -o dense.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dgCMatrix.c -o dgCMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dgTMatrix.c -o dgTMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dgeMatrix.c -o dgeMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dpoMatrix.c -o dpoMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dppMatrix.c -o dppMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dsCMatrix.c -o dsCMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dsTMatrix.c -o dsTMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dsyMatrix.c -o dsyMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dspMatrix.c -o dspMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dtCMatrix.c -o dtCMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dtTMatrix.c -o dtTMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dtrMatrix.c -o dtrMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c dtpMatrix.c -o dtpMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c factorizations.c -o factorizations.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c ldense.c -o ldense.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c lgCMatrix.c -o lgCMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c mmio.c -o mmio.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fpic -g -O2 -c sparseQR.c -o sparseQR.o gfortran -fpic -g -O2 -c zpotf2.f -o zpotf2.o gfortran -fpic -g -O2 -c zpotrf.f -o zpotrf.o touch CHOLMOD.stamp COLAMD.stamp AMD.stamp make[2]: Entering directory `/build/buildd/rmatrix-0.9975-7/src/CHOLMOD' ( cd Lib ; make ) make[3]: Entering directory `/build/buildd/rmatrix-0.9975-7/src/CHOLMOD/Lib' gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_aat.c -o cholmod_aat.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_add.c -o cholmod_add.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_band.c -o cholmod_band.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_common.c -o cholmod_common.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_complex.c -o cholmod_complex.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_copy.c -o cholmod_copy.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_dense.c -o cholmod_dense.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_error.c -o cholmod_error.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_factor.c -o cholmod_factor.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_memory.c -o cholmod_memory.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_sparse.c -o cholmod_sparse.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_transpose.c -o cholmod_transpose.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Core/cholmod_triplet.c -o cholmod_triplet.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Modify/cholmod_updown.c -o cholmod_updown.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Check/cholmod_check.c -o cholmod_check.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fpic -g -O2 -c ../Check/cholmod_read.c -o cholmod_read.o ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o cholmod_check.o cholmod_read.o make[3]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src/CHOLMOD/Lib' make[2]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src/CHOLMOD' make[2]: Entering directory `/build/buildd/rmatrix-0.9975-7/src/COLAMD' gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../UFconfig -fpic -g -O2 -c colamd.c -o colamd.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../UFconfig -fpic -g -O2 -c colamd_global.c -o colamd_global.o ar -rucs ../COLAMD.a colamd.o colamd_global.o make[2]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src/COLAMD' make[2]: Entering directory `/build/buildd/rmatrix-0.9975-7/src/AMD' ( cd Source ; make lib ) make[3]: Entering directory `/build/buildd/rmatrix-0.9975-7/src/AMD/Source' gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -c amd_global.c -o amd_global.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_aat.c -o amd_i_aat.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_1.c -o amd_i_1.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_2.c -o amd_i_2.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_dump.c -o amd_i_dump.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_postorder.c -o amd_i_postorder.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_post_tree.c -o amd_i_post_tree.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_defaults.c -o amd_i_defaults.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_order.c -o amd_i_order.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_control.c -o amd_i_control.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_info.c -o amd_i_info.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_valid.c -o amd_i_valid.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fpic -g -O2 -I../Include -c amd_preprocess.c -o amd_i_preprocess.o ar -rucs ../../AMD.a amd_global.o amd_i_aat.o amd_i_1.o amd_i_2.o amd_i_dump.o amd_i_postorder.o amd_i_post_tree.o amd_i_defaults.o amd_i_order.o amd_i_control.o amd_i_info.o amd_i_valid.o amd_i_preprocess.o make[3]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src/AMD/Source' make[2]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src/AMD' gcc -std=gnu99 -shared -o Matrix.so CHMfactor.o Csparse.o HBMM.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsTMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o mmio.o sparseQR.o zpotf2.o zpotrf.o CHOLMOD.a COLAMD.a AMD.a -L/usr/lib/R/lib -lRlapack -lblas-3 -lgfortran -lm -lgcc_s -L/usr/lib/R/lib -lR make[1]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src' ** R ** data ** inst ** preparing package for lazy loading Loading required package: lattice Creating a new generic function for "crossprod" in "Matrix" Creating a new generic function for "tcrossprod" in "Matrix" Creating a new generic function for "t" in "Matrix" Creating a new generic function for "diag" in "Matrix" Creating a new generic function for "colSums" in "Matrix" Creating a new generic function for "colMeans" in "Matrix" Creating a new generic function for "rowSums" in "Matrix" Creating a new generic function for "rowMeans" in "Matrix" Creating a new generic function for "as.matrix" in "Matrix" Creating a new generic function for "as.array" in "Matrix" Creating a new generic function for "head" in "Matrix" Creating a new generic function for "tail" in "Matrix" Creating a new generic function for "as.vector" in "Matrix" Creating a new generic function for "as.numeric" in "Matrix" Creating a new generic function for "as.logical" in "Matrix" Creating a new generic function for "isSymmetric" in "Matrix" Creating a new generic function for "unname" in "Matrix" Creating a new generic function for "solve" in "Matrix" Creating a new generic function for "kronecker" in "Matrix" Creating a new generic function for "determinant" in "Matrix" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csc" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csc" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.coo" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.coo" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.coo" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.coo" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csc" Creating a new generic function for "zapsmall" in "Matrix" Creating a new generic function for "image" in "Matrix" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graphAM" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graph" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graphNEL" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graphNEL" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graph" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graphNEL" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graphNEL" Creating a new generic function for "qr.qy" in "Matrix" Creating a new generic function for "qr.qty" in "Matrix" Creating a new generic function for "qr.coef" in "Matrix" Creating a new generic function for "qr.resid" in "Matrix" Creating a new generic function for "qr.fitted" in "Matrix" ** help >>> Building/Updating help pages for package 'Matrix' Formats: text html latex example CAex text html latex example CHMfactor-class text html latex Cholesky-class text html latex example Cholesky text html latex example CsparseMatrix-class text html latex example Diagonal text html latex example Hilbert text html latex example KNex text html latex example LU-class text html latex example Matrix-class text html latex example Matrix text html latex example MatrixFactorization-class text html latex example RsparseMatrix-class text html latex example Schur text html latex example SparseM-conv text html latex Subassign-methods text html latex example TsparseMatrix-class text html latex example Xtrct-methods text html latex example all-methods text html latex example band text html latex example bdiag text html latex example compMatrix-class text html latex dCholCMatrix-class text html latex example dMatrix-class text html latex example ddenseMatrix-class text html latex example ddiMatrix-class text html latex example denseMatrix-class text html latex example dgCMatrix-class text html latex example dgRMatrix-class text html latex dgTMatrix-class text html latex example dgeMatrix-class text html latex diagonalMatrix-class text html latex example dpoMatrix-class text html latex example dsCMatrix-class text html latex example dsRMatrix-class text html latex example dsparseMatrix-class text html latex example dsyMatrix-class text html latex example dtCMatrix-class text html latex example dtRMatrix-class-def text html latex example dtpMatrix-class text html latex example dtrMatrix-class text html latex example expand text html latex example expm text html latex example externalFormats text html latex example facmul text html latex example generalMatrix-class text html latex index-class text html latex example isSymmetric-methods text html latex ldenseMatrix-class text html latex example ldiMatrix-class text html latex example lgeMatrix-class text html latex example lsparseMatrix-classes text html latex example lsyMatrix-class text html latex example ltrMatrix-class text html latex example lu text html latex example nMatrix-class text html latex example ndenseMatrix-class text html latex example ngeMatrix-class text html latex example norm text html latex example nsparseMatrix-classes text html latex example nsyMatrix-class text html latex example ntrMatrix-class text html latex example pMatrix-class text html latex example qr-methods text html latex rcond text html latex example replValue-class text html latex example sparseLU-class text html latex example sparseMatrix-class text html latex example sparseQR-class text html latex example symmetricMatrix-class text html latex example tcrossprod text html latex example triangularMatrix-class text html latex example unpack text html latex example unused-classes text html latex example ** building package indices ... Loading required package: Matrix Loading required package: stats Loading required package: methods Loading required package: utils Loading required package: lattice make[1]: Entering directory `/build/buildd/rmatrix-0.9975-7/src' make[2]: Entering directory `/build/buildd/rmatrix-0.9975-7/src/CHOLMOD' ( cd Lib ; make clean ) make[3]: Entering directory `/build/buildd/rmatrix-0.9975-7/src/CHOLMOD/Lib' make[3]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src/CHOLMOD/Lib' make[2]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src/CHOLMOD' make[2]: Entering directory `/build/buildd/rmatrix-0.9975-7/src/COLAMD' make[2]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src/COLAMD' make[2]: Entering directory `/build/buildd/rmatrix-0.9975-7/src/AMD' ( cd Source ; make clean ) make[3]: Entering directory `/build/buildd/rmatrix-0.9975-7/src/AMD/Source' make[3]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src/AMD/Source' make[2]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src/AMD' make[1]: Leaving directory `/build/buildd/rmatrix-0.9975-7/src' * DONE (Matrix) rm -vf /build/buildd/rmatrix-0.9975-7/debian/r-cran-matrix/usr/lib/R/site-library/R.css \ /build/buildd/rmatrix-0.9975-7/debian/r-cran-matrix/usr/lib/R/site-library/matrix/COPYING \ /build/buildd/rmatrix-0.9975-7/debian/r-cran-matrix/usr/lib/R/site-library/matrix/LICENSE.txt removed `/build/buildd/rmatrix-0.9975-7/debian/r-cran-matrix/usr/lib/R/site-library/R.css' if test -f debian/overrides; then \ install -d /build/buildd/rmatrix-0.9975-7/debian/r-cran-matrix/usr/share/lintian/overrides ; \ install -m 0644 debian/overrides \ /build/buildd/rmatrix-0.9975-7/debian/r-cran-matrix/usr/share/lintian/overrides/r-cran-matrix; \ fi dh_installdirs -pr-cran-matrix dh_installdocs -pr-cran-matrix ./TODO dh_installexamples -pr-cran-matrix dh_installman -pr-cran-matrix dh_installinfo -pr-cran-matrix dh_installmenu -pr-cran-matrix dh_installcron -pr-cran-matrix dh_installinit -pr-cran-matrix dh_installdebconf -pr-cran-matrix dh_installemacsen -pr-cran-matrix dh_installcatalogs -pr-cran-matrix dh_installpam -pr-cran-matrix dh_installlogrotate -pr-cran-matrix dh_installlogcheck -pr-cran-matrix dh_installmime -pr-cran-matrix dh_installchangelogs -pr-cran-matrix ./ChangeLog dh_installudev -pr-cran-matrix dh_install -pr-cran-matrix dh_link -pr-cran-matrix dh_strip -pr-cran-matrix dh_strip debug symbol extraction: all non-arch-all packages for this build platform i386: r-cran-matrix dh_strip debug symbol extraction: packages to act on: r-cran-matrix dh_strip debug symbol extraction: ignored packages: pkgstriptranslations: processing control file: ./debian/r-cran-matrix-dbgsym/DEBIAN/control, package r-cran-matrix-dbgsym, directory ./debian/r-cran-matrix-dbgsym pkgstriptranslations: r-cran-matrix-dbgsym does not contain translations, skipping pkgstriptranslations: preparing translation tarball rmatrix_0.9975-7-1_i386_translations.tar.gz...done (2 files) pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `/build/buildd/rmatrix-0.9975-7/debian/r-cran-matrix-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `r-cran-matrix-dbgsym' in `../r-cran-matrix-dbgsym_0.9975-7-1_i386.ddeb'. dh_compress -pr-cran-matrix dh_fixperms -pr-cran-matrix dh_makeshlibs -pr-cran-matrix dh_installdeb -pr-cran-matrix dh_perl -pr-cran-matrix dh_shlibdeps -pr-cran-matrix dpkg-shlibdeps: warning: format of `NEEDED libRlapack.so' not recognized dpkg-shlibdeps: warning: format of `NEEDED libR.so' not recognized dh_gencontrol -pr-cran-matrix dh_md5sums -pr-cran-matrix dh_builddeb -pr-cran-matrix pkgstriptranslations: processing control file: ./debian/r-cran-matrix/DEBIAN/control, package r-cran-matrix, directory ./debian/r-cran-matrix pkgstriptranslations: r-cran-matrix does not contain translations, skipping pkgstriptranslations: tarball already exists pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `debian/r-cran-matrix/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `r-cran-matrix' in `../r-cran-matrix_0.9975-7-1_i386.deb'. dpkg-genchanges -b -mUbuntu/i386 Build Daemon dpkg-genchanges: binary-only upload - not including any source code dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20061220-1614 Publishing chroot-autobuild/build/buildd/rmatrix_0.9975-7-1_i386_translations.tar.gz for rosetta. Publishing debug debs. chroot-autobuild/build/buildd/r-cran-matrix_0.9975-7-1_i386.deb: new debian package, version 2.0. size 1295214 bytes: control archive= 10078 bytes. 770 bytes, 15 lines control 28770 bytes, 336 lines md5sums 475 bytes, 25 lines * postinst #!/bin/sh 490 bytes, 25 lines * postrm #!/bin/sh Package: r-cran-matrix Version: 0.9975-7-1 Section: math Priority: optional Architecture: i386 Depends: atlas3-base | refblas3 | libblas.so.3, libc6 (>= 2.5-0ubuntu1), libgcc1 (>= 1:4.1.1-21ubuntu1), libgfortran1 (>= 4.1.1-21ubuntu1), r-base-core (>= 2.4.0), r-cran-lattice (>= 0.12-11.1) Installed-Size: 3524 Maintainer: Ubuntu MOTU Developers Original-Maintainer: Dirk Eddelbuettel Source: rmatrix Description: GNU R package of classes for dense and sparse matrices This CRAN package provides S4 classes and methods for numerical linear algebra using dense or sparse matrices. The sparse matrix implementation uses code from the LDL sparse matrix package and code from the Metis package of partitioning algorithms. chroot-autobuild/build/buildd/r-cran-matrix_0.9975-7-1_i386.deb: drwxr-xr-x root/root 0 2006-12-20 16:14:19 ./ drwxr-xr-x root/root 0 2006-12-20 16:14:18 ./usr/ drwxr-xr-x root/root 0 2006-12-20 16:12:45 ./usr/lib/ drwxr-xr-x root/root 0 2006-12-20 16:12:45 ./usr/lib/R/ drwxr-xr-x root/root 0 2006-12-20 16:14:18 ./usr/lib/R/site-library/ drwxr-xr-x root/root 0 2006-12-20 16:14:14 ./usr/lib/R/site-library/Matrix/ -rw-r--r-- root/root 4584 2006-12-20 16:12:45 ./usr/lib/R/site-library/Matrix/NAMESPACE -rw-r--r-- root/root 1045 2006-12-20 16:12:45 ./usr/lib/R/site-library/Matrix/DESCRIPTION drwxr-xr-x root/root 0 2006-12-20 16:14:18 ./usr/lib/R/site-library/Matrix/Meta/ -rw-r--r-- root/root 996 2006-12-20 16:12:45 ./usr/lib/R/site-library/Matrix/Meta/package.rds -rw-r--r-- root/root 7207 2006-12-20 16:14:14 ./usr/lib/R/site-library/Matrix/Meta/Rd.rds 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Format: 1.7 Date: Tue, 19 Dec 2006 19:55:35 -0600 Source: rmatrix Binary: r-cran-matrix Architecture: i386_translations i386 Version: 0.9975-7-1 Distribution: autobuild Urgency: low Maintainer: Ubuntu/i386 Build Daemon Changed-By: Dirk Eddelbuettel Description: r-cran-matrix - GNU R package of classes for dense and sparse matrices Changes: rmatrix (0.9975-7-1) unstable; urgency=low . * New upstream release * Upload intended for unstable only as etch is frozen Files: 1a1c17b6b32ea11e5261eee94077fada 4373 raw-translations - rmatrix_0.9975-7-1_i386_translations.tar.gz 9b4b4649a20ab7fe28fb24fd1c67a96e 1295214 math optional r-cran-matrix_0.9975-7-1_i386.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/rmatrix-0.9975-7 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --root=/home/buildd/build-288158-552821/chroot-autobuild --purge libx11-data 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