RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '336128-737621', '/home/buildd/filecache-default/11a72c053c97b86376551adebb63420ff26a61b6'] Unpacking chroot for build 336128-737621 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '336128-737621'] Mounting chroot for build 336128-737621 RUN: /usr/share/launchpad-buildd/slavebin/apply-ogre-model ['apply-ogre-model', '336128-737621', 'universe'] Attempting OGRE for universe in build-336128-737621 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '336128-737621'] Updating debian chroot for build 336128-737621 Get:1 http://ftpmaster.internal gutsy Release.gpg [191B] Get:2 http://ftpmaster.internal gutsy Release [57.2kB] Get:3 http://ftpmaster.internal gutsy/main Packages [1060kB] Get:4 http://ftpmaster.internal gutsy/universe Packages [3783kB] Fetched 4900kB in 4s (1055kB/s) Reading package lists... Reading package lists... Building dependency tree... The following packages will be upgraded: base-files bash belocs-locales-bin binutils bsdutils coreutils cpp cpp-4.1 dash debianutils diff fakeroot findutils g++ g++-4.1 gcc gcc-4.1 gcc-4.1-base gcc-4.2-base lib64gcc1 libc6 libc6-dev libc6-dev-sparc64 libc6-sparc64 libdb4.3 libgcc1 libncurses5 libselinux1 libsepol1 libslang2 libstdc++6 libstdc++6-4.1-dev linux-libc-dev login mktemp mount ncurses-base ncurses-bin passwd sed tar util-linux zlib1g 43 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 0B/30.5MB of archives. After unpacking 4096B of additional disk space will be used. (Reading database ... 9607 files and directories currently installed.) Preparing to replace linux-libc-dev 2.6.22-1.5 (using .../linux-libc-dev_2.6.22-4.10_sparc.deb) ... Unpacking replacement linux-libc-dev ... Preparing to replace libc6-dev-sparc64 2.5-2ubuntu1 (using .../libc6-dev-sparc64_2.5-7ubuntu1_sparc.deb) ... Unpacking replacement libc6-dev-sparc64 ... Preparing to replace libc6-dev 2.5-2ubuntu1 (using .../libc6-dev_2.5-7ubuntu1_sparc.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc6-sparc64 2.5-2ubuntu1 (using .../libc6-sparc64_2.5-7ubuntu1_sparc.deb) ... Unpacking replacement libc6-sparc64 ... Preparing to replace libc6 2.5-2ubuntu1 (using .../libc6_2.5-7ubuntu1_sparc.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.5-7ubuntu1) ... Installing new version of config file /etc/init.d/glibc.sh ... (Reading database ... 9599 files and directories currently installed.) Preparing to replace base-files 4.0ubuntu1 (using .../base-files_4.0.0ubuntu1_sparc.deb) ... Unpacking replacement base-files ... Setting up base-files (4.0.0ubuntu1) ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace debianutils 2.18 (using .../debianutils_2.18.2_sparc.deb) ... Unpacking replacement debianutils ... Setting up debianutils (2.18.2) ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace bash 3.2-0ubuntu7 (using .../bash_3.2-0ubuntu8_sparc.deb) ... Unpacking replacement bash ... Setting up bash (3.2-0ubuntu8) ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace bsdutils 1:2.12r-17ubuntu2 (using .../bsdutils_1%3a2.12r-19ubuntu1_sparc.deb) ... Unpacking replacement bsdutils ... Setting up bsdutils (2.12r-19ubuntu1) ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace libsepol1 2.0.1-1 (using .../libsepol1_2.0.3-1_sparc.deb) ... Unpacking replacement libsepol1 ... Setting up libsepol1 (2.0.3-1) ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace libselinux1 1.32-3ubuntu1 (using .../libselinux1_2.0.15-2ubuntu1_sparc.deb) ... Unpacking replacement libselinux1 ... Setting up libselinux1 (2.0.15-2ubuntu1) ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace coreutils 5.97-5.2ubuntu3 (using .../coreutils_5.97-5.3ubuntu1_sparc.deb) ... Unpacking replacement coreutils ... Setting up coreutils (5.97-5.3ubuntu1) ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace diff 2.8.1-11ubuntu4 (using .../diff_2.8.1-12ubuntu1_sparc.deb) ... Unpacking replacement diff ... Setting up diff (2.8.1-12ubuntu1) ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace findutils 4.2.28-2 (using .../findutils_4.2.30-1_sparc.deb) ... Unpacking replacement findutils ... Setting up findutils (4.2.30-1) ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace login 1:4.0.18.1-6ubuntu1 (using .../login_1%3a4.0.18.1-9_sparc.deb) ... Unpacking replacement login ... Setting up login (4.0.18.1-9) ... Installing new version of config file /etc/login.defs ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace mktemp 1.5-2 (using .../mktemp_1.5-3_sparc.deb) ... Unpacking replacement mktemp ... Setting up mktemp (1.5-3) ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace mount 2.12r-17ubuntu2 (using .../mount_2.12r-19ubuntu1_sparc.deb) ... Unpacking replacement mount ... Setting up mount (2.12r-19ubuntu1) ... (Reading database ... 9601 files and directories currently installed.) Preparing to replace ncurses-bin 5.5-5ubuntu2 (using .../ncurses-bin_5.6-0ubuntu1_sparc.deb) ... Unpacking replacement ncurses-bin ... Setting up ncurses-bin (5.6-0ubuntu1) ... (Reading database ... 9602 files and directories currently installed.) Preparing to replace sed 4.1.5-1 (using .../archives/sed_4.1.5-2_sparc.deb) ... Unpacking replacement sed ... Setting up sed (4.1.5-2) ... (Reading database ... 9602 files and directories currently installed.) Preparing to replace tar 1.16-2 (using .../tar_1.16.1-1_sparc.deb) ... Unpacking replacement tar ... Setting up tar (1.16.1-1) ... (Reading database ... 9602 files and directories currently installed.) Preparing to replace util-linux 2.12r-17ubuntu2 (using .../util-linux_2.12r-19ubuntu1_sparc.deb) ... Unpacking replacement util-linux ... Setting up util-linux (2.12r-19ubuntu1) ... Installing new version of config file /etc/init.d/hwclock.sh ... (Reading database ... 9602 files and directories currently installed.) Preparing to replace libncurses5 5.5-5ubuntu2 (using .../libncurses5_5.6-0ubuntu1_sparc.deb) ... Unpacking replacement libncurses5 ... Setting up libncurses5 (5.6-0ubuntu1) ... (Reading database ... 9602 files and directories currently installed.) Preparing to replace ncurses-base 5.5-5ubuntu2 (using .../ncurses-base_5.6-0ubuntu1_all.deb) ... Unpacking replacement ncurses-base ... Setting up ncurses-base (5.6-0ubuntu1) ... (Reading database ... 9602 files and directories currently installed.) Preparing to replace dash 0.5.3-5ubuntu2 (using .../dash_0.5.3-7ubuntu1_sparc.deb) ... Unpacking replacement dash ... Preparing to replace lib64gcc1 1:4.2-20070425-0ubuntu1 (using .../lib64gcc1_1%3a4.2-20070516-0ubuntu1_sparc.deb) ... Unpacking replacement lib64gcc1 ... Preparing to replace gcc-4.2-base 4.2-20070425-0ubuntu1 (using .../gcc-4.2-base_4.2-20070516-0ubuntu1_sparc.deb) ... Unpacking replacement gcc-4.2-base ... Preparing to replace libstdc++6 4.2-20070425-0ubuntu1 (using .../libstdc++6_4.2-20070516-0ubuntu1_sparc.deb) ... Unpacking replacement libstdc++6 ... Setting up gcc-4.2-base (4.2-20070516-0ubuntu1) ... Setting up libstdc++6 (4.2-20070516-0ubuntu1) ... (Reading database ... 9602 files and directories currently installed.) Preparing to replace libgcc1 1:4.2-20070425-0ubuntu1 (using .../libgcc1_1%3a4.2-20070516-0ubuntu1_sparc.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (4.2-20070516-0ubuntu1) ... (Reading database ... 9602 files and directories currently installed.) Preparing to replace belocs-locales-bin 2.4-2ubuntu2 (using .../belocs-locales-bin_2.4-2.2ubuntu1_sparc.deb) ... Unpacking replacement belocs-locales-bin ... Preparing to replace libstdc++6-4.1-dev 4.1.2-3ubuntu3 (using .../libstdc++6-4.1-dev_4.1.2-7ubuntu2_sparc.deb) ... Unpacking replacement libstdc++6-4.1-dev ... Preparing to replace g++-4.1 4.1.2-3ubuntu3 (using .../g++-4.1_4.1.2-7ubuntu2_sparc.deb) ... Unpacking replacement g++-4.1 ... Preparing to replace gcc-4.1 4.1.2-3ubuntu3 (using .../gcc-4.1_4.1.2-7ubuntu2_sparc.deb) ... Unpacking replacement gcc-4.1 ... Preparing to replace cpp-4.1 4.1.2-3ubuntu3 (using .../cpp-4.1_4.1.2-7ubuntu2_sparc.deb) ... Unpacking replacement cpp-4.1 ... Preparing to replace binutils 2.17.20070426cvs-2ubuntu3 (using .../binutils_2.17.20070426cvs-2ubuntu7_sparc.deb) ... Unpacking replacement binutils ... Preparing to replace gcc-4.1-base 4.1.2-3ubuntu3 (using .../gcc-4.1-base_4.1.2-7ubuntu2_sparc.deb) ... Unpacking replacement gcc-4.1-base ... Preparing to replace libdb4.3 4.3.29-6build1 (using .../libdb4.3_4.3.29-8_sparc.deb) ... Unpacking replacement libdb4.3 ... Preparing to replace libslang2 2.0.6-4build1 (using .../libslang2_2.0.7-1_sparc.deb) ... Unpacking replacement libslang2 ... Preparing to replace passwd 1:4.0.18.1-6ubuntu1 (using .../passwd_1%3a4.0.18.1-9_sparc.deb) ... Unpacking replacement passwd ... Preparing to replace zlib1g 1:1.2.3-13ubuntu4 (using .../zlib1g_1%3a1.2.3-14ubuntu1_sparc.deb) ... Unpacking replacement zlib1g ... Preparing to replace cpp 4:4.1.2-1ubuntu3 (using .../cpp_4%3a4.1.2-1ubuntu4_sparc.deb) ... Unpacking replacement cpp ... Preparing to replace fakeroot 1.5.10ubuntu2 (using .../fakeroot_1.7.1ubuntu1_sparc.deb) ... Unpacking replacement fakeroot ... Preparing to replace gcc 4:4.1.2-1ubuntu3 (using .../gcc_4%3a4.1.2-1ubuntu4_sparc.deb) ... Removing old gcc doc directory. Unpacking replacement gcc ... Preparing to replace g++ 4:4.1.2-1ubuntu3 (using .../g++_4%3a4.1.2-1ubuntu4_sparc.deb) ... Unpacking replacement g++ ... Setting up linux-libc-dev (2.6.22-4.10) ... Setting up libc6-sparc64 (2.5-7ubuntu1) ... Setting up libc6-dev (2.5-7ubuntu1) ... Setting up libc6-dev-sparc64 (2.5-7ubuntu1) ... Setting up dash (0.5.3-7ubuntu1) ... Setting up lib64gcc1 (4.2-20070516-0ubuntu1) ... Setting up belocs-locales-bin (2.4-2.2ubuntu1) ... Setting up gcc-4.1-base (4.1.2-7ubuntu2) ... Setting up cpp-4.1 (4.1.2-7ubuntu2) ... Setting up binutils (2.17.20070426cvs-2ubuntu7) ... Setting up gcc-4.1 (4.1.2-7ubuntu2) ... Setting up libdb4.3 (4.3.29-8) ... Setting up libslang2 (2.0.7-1) ... Setting up passwd (4.0.18.1-9) ... Installing new version of config file /etc/default/useradd ... Setting up zlib1g (1.2.3-14ubuntu1) ... Setting up cpp (4.1.2-1ubuntu4) ... Setting up fakeroot (1.7.1ubuntu1) ... Setting up gcc (4.1.2-1ubuntu4) ... Setting up libstdc++6-4.1-dev (4.1.2-7ubuntu2) ... Setting up g++-4.1 (4.1.2-7ubuntu2) ... Setting up g++ (4.1.2-1ubuntu4) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '336128-737621', '-dautobuild', '--nolog', '--batch', '--archive=ubuntu', '--comp=universe', 'rmatrix_0.99875-1-1.dsc'] Initiating build Automatic build of rmatrix_0.99875-1-1 on sejong by sbuild/sparc 1.170.5 Build started at 20070518-1842 ****************************************************************************** rmatrix_0.99875-1-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 5.0.0), cdbs, r-base-dev (>= 2.5.0), r-cran-lattice (>= 0.12-11.1) Checking for already installed source dependencies... debhelper: missing cdbs: missing r-base-dev: missing r-cran-lattice: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper cdbs r-base-dev r-cran-lattice Reading package lists... Building dependency tree... The following extra packages will be installed: cpp-3.4 file g77 g77-3.4 gcc-3.4 gcc-3.4-base gettext gettext-base gfortran gfortran-4.1 html2text intltool-debian libbz2-1.0 libbz2-dev libg2c0 libg2c0-dev libgfortran1 libgmp3c2 libice6 libjpeg62 libjpeg62-dev libmagic1 libmpfr1 libncurses5-dev libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpng12-0 libpng12-dev libreadline5 libreadline5-dev libsm6 libx11-6 libx11-data libxau6 libxdmcp6 libxt6 po-debconf r-base-core readline-common refblas3 refblas3-dev tcl8.4 tk8.4 ucf unzip x11-common zip zlib1g-dev Suggested packages: devscripts doc-base dh-make g77-doc g77-3.4-doc gcc-3.4-doc cvs gettext-doc gfortran-multilib gfortran-doc gfortran-4.1-multilib gfortran-4.1-doc ess r-doc-info r-doc-pdf r-doc-html r-mathlib r-base-html r-base-latex tclreadline Recommended packages: autotools-dev curl wget lynx libmail-sendmail-perl libcompress-zlib-perl r-recommended xterm x-terminal-emulator debconf-utils The following NEW packages will be installed: cdbs cpp-3.4 debhelper file g77 g77-3.4 gcc-3.4 gcc-3.4-base gettext gettext-base gfortran gfortran-4.1 html2text intltool-debian libbz2-1.0 libbz2-dev libg2c0 libg2c0-dev libgfortran1 libgmp3c2 libice6 libjpeg62 libjpeg62-dev libmagic1 libmpfr1 libncurses5-dev libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpng12-0 libpng12-dev libreadline5 libreadline5-dev libsm6 libx11-6 libx11-data libxau6 libxdmcp6 libxt6 po-debconf r-base-core r-base-dev r-cran-lattice readline-common refblas3 refblas3-dev tcl8.4 tk8.4 ucf unzip x11-common zip zlib1g-dev 0 upgraded, 55 newly installed, 0 to remove and 0 not upgraded. Need to get 13.3MB/28.6MB of archives. After unpacking 91.2MB of additional disk space will be used. Get:1 http://ftpmaster.internal gutsy/main libgfortran1 4.1.2-7ubuntu2 [153kB] Get:2 http://ftpmaster.internal gutsy/main gfortran-4.1 4.1.2-7ubuntu2 [2355kB] Get:3 http://ftpmaster.internal gutsy/universe r-base-core 2.5.1~20070513-1 [10.3MB] Get:4 http://ftpmaster.internal gutsy/universe r-base-dev 2.5.1~20070513-1 [2804B] Get:5 http://ftpmaster.internal gutsy/universe r-cran-lattice 0.15-5-1 [532kB] Fetched 13.3MB in 0s (25.4MB/s) Selecting previously deselected package x11-common. (Reading database ... 9604 files and directories currently installed.) Unpacking x11-common (from .../x11-common_1%3a7.2-0ubuntu11_sparc.deb) ... Selecting previously deselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.3-2_sparc.deb) ... Selecting previously deselected package libxdmcp6. Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.0.2-2_sparc.deb) ... Setting up x11-common (7.2-0ubuntu11) ... Selecting previously deselected package libx11-data. (Reading database ... 9647 files and directories currently installed.) Unpacking libx11-data (from .../libx11-data_2%3a1.1.1-1ubuntu3_all.deb) ... Selecting previously deselected package libx11-6. Unpacking libx11-6 (from .../libx11-6_2%3a1.1.1-1ubuntu3_sparc.deb) ... Selecting previously deselected package libice6. Unpacking libice6 (from .../libice6_2%3a1.0.3-1build1_sparc.deb) ... Selecting previously deselected package libsm6. Unpacking libsm6 (from .../libsm6_2%3a1.0.3-1_sparc.deb) ... Selecting previously deselected package libxt6. Unpacking libxt6 (from .../libxt6_1%3a1.0.5-2_sparc.deb) ... Selecting previously deselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.16.1-1ubuntu2_sparc.deb) ... Selecting previously deselected package libbz2-1.0. Unpacking libbz2-1.0 (from .../libbz2-1.0_1.0.3-6build1_sparc.deb) ... Selecting previously deselected package readline-common. Unpacking readline-common (from .../readline-common_5.2-2ubuntu2_all.deb) ... Selecting previously deselected package libreadline5. Unpacking libreadline5 (from .../libreadline5_5.2-2ubuntu2_sparc.deb) ... Selecting previously deselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_4.20-5ubuntu1_sparc.deb) ... Selecting previously deselected package file. Unpacking file (from .../file_4.20-5ubuntu1_sparc.deb) ... Selecting previously deselected package cdbs. Unpacking cdbs (from .../cdbs_0.4.48ubuntu1_all.deb) ... Selecting previously deselected package gcc-3.4-base. Unpacking gcc-3.4-base (from .../gcc-3.4-base_3.4.6-5ubuntu1_sparc.deb) ... Selecting previously deselected package cpp-3.4. Unpacking cpp-3.4 (from .../cpp-3.4_3.4.6-5ubuntu1_sparc.deb) ... Selecting previously deselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-3_sparc.deb) ... Selecting previously deselected package gettext. Unpacking gettext (from .../gettext_0.16.1-1ubuntu2_sparc.deb) ... Selecting previously deselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously deselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.8_all.deb) ... Selecting previously deselected package debhelper. Unpacking debhelper (from .../debhelper_5.0.49ubuntu1_all.deb) ... Selecting previously deselected package gcc-3.4. Unpacking gcc-3.4 (from .../gcc-3.4_3.4.6-5ubuntu1_sparc.deb) ... Selecting previously deselected package libg2c0. Unpacking libg2c0 (from .../libg2c0_1%3a3.4.6-5ubuntu1_sparc.deb) ... Selecting previously deselected package libg2c0-dev. Unpacking libg2c0-dev (from .../libg2c0-dev_1%3a3.4.6-5ubuntu1_sparc.deb) ... Selecting previously deselected package g77-3.4. Unpacking g77-3.4 (from .../g77-3.4_3.4.6-5ubuntu1_sparc.deb) ... Selecting previously deselected package g77. Unpacking g77 (from .../g77_4%3a3.4.6-20ubuntu4_sparc.deb) ... Selecting previously deselected package libgfortran1. Unpacking libgfortran1 (from .../libgfortran1_4.1.2-7ubuntu2_sparc.deb) ... Selecting previously deselected package libgmp3c2. Unpacking libgmp3c2 (from .../libgmp3c2_2%3a4.2.1+dfsg-4build1_sparc.deb) ... Selecting previously deselected package libmpfr1. Unpacking libmpfr1 (from .../libmpfr1_2.2.1.dfsg.1-2_sparc.deb) ... Selecting previously deselected package gfortran-4.1. Unpacking gfortran-4.1 (from .../gfortran-4.1_4.1.2-7ubuntu2_sparc.deb) ... Selecting previously deselected package gfortran. Unpacking gfortran (from .../gfortran_4%3a4.1.2-1ubuntu4_sparc.deb) ... Selecting previously deselected package libbz2-dev. Unpacking libbz2-dev (from .../libbz2-dev_1.0.3-6build1_sparc.deb) ... Selecting previously deselected package libjpeg62. Unpacking libjpeg62 (from .../libjpeg62_6b-13_sparc.deb) ... Selecting previously deselected package libjpeg62-dev. Unpacking libjpeg62-dev (from .../libjpeg62-dev_6b-13_sparc.deb) ... Selecting previously deselected package libncurses5-dev. Unpacking libncurses5-dev (from .../libncurses5-dev_5.6-0ubuntu1_sparc.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../apt/archives/ucf_3.001_all.deb) ... Moving old data out of the way Selecting previously deselected package libpaper1. Unpacking libpaper1 (from .../libpaper1_1.1.21build1_sparc.deb) ... Selecting previously deselected package libpaper-utils. Unpacking libpaper-utils (from .../libpaper-utils_1.1.21build1_sparc.deb) ... Selecting previously deselected package libpcre3. Unpacking libpcre3 (from .../libpcre3_6.7-1ubuntu2_sparc.deb) ... Selecting previously deselected package libpcrecpp0. Unpacking libpcrecpp0 (from .../libpcrecpp0_6.7-1ubuntu2_sparc.deb) ... Selecting previously deselected package libpcre3-dev. Unpacking libpcre3-dev (from .../libpcre3-dev_6.7-1ubuntu2_sparc.deb) ... Selecting previously deselected package libpng12-0. Unpacking libpng12-0 (from .../libpng12-0_1.2.15~beta5-2_sparc.deb) ... Selecting previously deselected package zlib1g-dev. Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3-14ubuntu1_sparc.deb) ... Selecting previously deselected package libpng12-dev. Unpacking libpng12-dev (from .../libpng12-dev_1.2.15~beta5-2_sparc.deb) ... Selecting previously deselected package libreadline5-dev. Unpacking libreadline5-dev (from .../libreadline5-dev_5.2-2ubuntu2_sparc.deb) ... Selecting previously deselected package zip. Unpacking zip (from .../archives/zip_2.32-1_sparc.deb) ... Selecting previously deselected package unzip. Unpacking unzip (from .../unzip_5.52-9ubuntu3_sparc.deb) ... Selecting previously deselected package tcl8.4. Unpacking tcl8.4 (from .../tcl8.4_8.4.14-0ubuntu1_sparc.deb) ... Selecting previously deselected package tk8.4. Unpacking tk8.4 (from .../tk8.4_8.4.14-0ubuntu2_sparc.deb) ... Selecting previously deselected package r-base-core. Unpacking r-base-core (from .../r-base-core_2.5.1~20070513-1_sparc.deb) ... Selecting previously deselected package refblas3. Unpacking refblas3 (from .../refblas3_1.2-8ubuntu2_sparc.deb) ... Selecting previously deselected package refblas3-dev. Unpacking refblas3-dev (from .../refblas3-dev_1.2-8ubuntu2_sparc.deb) ... Selecting previously deselected package r-base-dev. Unpacking r-base-dev (from .../r-base-dev_2.5.1~20070513-1_all.deb) ... Selecting previously deselected package r-cran-lattice. Unpacking r-cran-lattice (from .../r-cran-lattice_0.15-5-1_sparc.deb) ... Setting up libxau6 (1.0.3-2) ... Setting up libxdmcp6 (1.0.2-2) ... Setting up libx11-data (1.1.1-1ubuntu3) ... Setting up libx11-6 (1.1.1-1ubuntu3) ... Setting up libice6 (1.0.3-1build1) ... Setting up libsm6 (1.0.3-1) ... Setting up libxt6 (1.0.5-2) ... Setting up gettext-base (0.16.1-1ubuntu2) ... Setting up libbz2-1.0 (1.0.3-6build1) ... 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Toolchain package versions: libc6-dev_2.5-7ubuntu1 make_3.81-3build1 dpkg-dev_1.13.24ubuntu6 linux-kernel-headers_=*=PROVIDED=*= gcc-4.1_4.1.2-7ubuntu2 g++-4.1_4.1.2-7ubuntu2 binutils_2.17.20070426cvs-2ubuntu7 libstdc++6-4.1-dev_4.1.2-7ubuntu2 libstdc++6_4.2-20070516-0ubuntu1 ------------------------------------------------------------------------------ dpkg-source: extracting rmatrix in rmatrix-0.99875-1 dpkg-source: unpacking rmatrix_0.99875-1.orig.tar.gz dpkg-source: applying /home/buildd/build-336128-737621/rmatrix_0.99875-1-1.diff.gz dpkg-buildpackage: source package is rmatrix dpkg-buildpackage: source version is 0.99875-1-1 dpkg-buildpackage: host architecture sparc dpkg-buildpackage: source version without epoch 0.99875-1-1 /usr/bin/fakeroot debian/rules clean test -x debian/rules test "`id -u`" = 0 dh_clean dh_clean: Compatibility levels before 4 are deprecated. debian/rules build test -x debian/rules mkdir -p "." echo 5 >debian/compat /usr/bin/fakeroot debian/rules binary-arch test -x debian/rules test "`id -u`" = 0 dh_clean -k dh_installdirs -A mkdir -p "." dh_installdirs usr/lib/R/site-library R CMD INSTALL -l /build/buildd/rmatrix-0.99875-1/debian/r-cran-matrix/usr/lib/R/site-library --clean . * Installing *source* package 'Matrix' ... ** libs ** arch - make[1]: Entering directory `/build/buildd/rmatrix-0.99875-1/src' gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c CHMfactor.c -o CHMfactor.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c Csparse.c -o Csparse.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c HBMM.c -o HBMM.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c TMatrix_as.c -o TMatrix_as.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c Tsparse.c -o Tsparse.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c init.c -o init.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c Mutils.c -o Mutils.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c chm_common.c -o chm_common.o chm_common.c: In function 'R_cholmod_start': chm_common.c:411: warning: assignment from incompatible pointer type gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c cs.c -o cs.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c cs_utils.c -o cs_utils.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dense.c -o dense.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dgCMatrix.c -o dgCMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dgTMatrix.c -o dgTMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dgeMatrix.c -o dgeMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dpoMatrix.c -o dpoMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dppMatrix.c -o dppMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dsCMatrix.c -o dsCMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dsyMatrix.c -o dsyMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dspMatrix.c -o dspMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dtCMatrix.c -o dtCMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dtTMatrix.c -o dtTMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dtrMatrix.c -o dtrMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c dtpMatrix.c -o dtpMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c factorizations.c -o factorizations.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c ldense.c -o ldense.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c lgCMatrix.c -o lgCMatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c mmio.c -o mmio.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -fPIC -g -O2 -c sparseQR.c -o sparseQR.o touch CHOLMOD.stamp COLAMD.stamp AMD.stamp make[2]: Entering directory `/build/buildd/rmatrix-0.99875-1/src/CHOLMOD' ( cd Lib ; make ) make[3]: Entering directory `/build/buildd/rmatrix-0.99875-1/src/CHOLMOD/Lib' gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_aat.c -o cholmod_aat.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_add.c -o cholmod_add.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_band.c -o cholmod_band.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_common.c -o cholmod_common.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_complex.c -o cholmod_complex.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_copy.c -o cholmod_copy.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_dense.c -o cholmod_dense.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_error.c -o cholmod_error.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_factor.c -o cholmod_factor.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_memory.c -o cholmod_memory.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_sparse.c -o cholmod_sparse.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_transpose.c -o cholmod_transpose.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Core/cholmod_triplet.c -o cholmod_triplet.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Modify/cholmod_updown.c -o cholmod_updown.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Check/cholmod_check.c -o cholmod_check.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../../AMD/Include -I../../AMD/Source -I../../COLAMD -I../../CCOLAMD -I../Include -I../../UFconfig -DNPARTITION -fPIC -g -O2 -c ../Check/cholmod_read.c -o cholmod_read.o ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o cholmod_check.o cholmod_read.o make[3]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src/CHOLMOD/Lib' make[2]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src/CHOLMOD' make[2]: Entering directory `/build/buildd/rmatrix-0.99875-1/src/COLAMD' gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../UFconfig -fPIC -g -O2 -c colamd.c -o colamd.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I../UFconfig -fPIC -g -O2 -c colamd_global.c -o colamd_global.o ar -rucs ../COLAMD.a colamd.o colamd_global.o make[2]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src/COLAMD' make[2]: Entering directory `/build/buildd/rmatrix-0.99875-1/src/AMD' ( cd Source ; make lib ) make[3]: Entering directory `/build/buildd/rmatrix-0.99875-1/src/AMD/Source' gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -c amd_global.c -o amd_global.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_aat.c -o amd_i_aat.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_1.c -o amd_i_1.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_2.c -o amd_i_2.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_dump.c -o amd_i_dump.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_postorder.c -o amd_i_postorder.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_post_tree.c -o amd_i_post_tree.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_defaults.c -o amd_i_defaults.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_order.c -o amd_i_order.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_control.c -o amd_i_control.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_info.c -o amd_i_info.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_valid.c -o amd_i_valid.o gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -DDINT -I../Include -I../../UFconfig -fPIC -g -O2 -I../Include -c amd_preprocess.c -o amd_i_preprocess.o ar -rucs ../../AMD.a amd_global.o amd_i_aat.o amd_i_1.o amd_i_2.o amd_i_dump.o amd_i_postorder.o amd_i_post_tree.o amd_i_defaults.o amd_i_order.o amd_i_control.o amd_i_info.o amd_i_valid.o amd_i_preprocess.o make[3]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src/AMD/Source' make[2]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src/AMD' gcc -std=gnu99 -shared -o Matrix.so CHMfactor.o Csparse.o HBMM.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o mmio.o sparseQR.o CHOLMOD.a COLAMD.a AMD.a -L/usr/lib/R/lib -lRlapack -L/usr/lib/R/lib -lRblas -lgfortran -lm -L/usr/lib/R/lib -lR make[1]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src' ** R ** data ** inst ** preparing package for lazy loading Loading required package: lattice Creating a new generic function for "image" in "Matrix" Creating a new generic function for "crossprod" in "Matrix" Creating a new generic function for "tcrossprod" in "Matrix" Creating a new generic function for "t" in "Matrix" Creating a new generic function for "diag" in "Matrix" Creating a new generic function for "colSums" in "Matrix" Creating a new generic function for "colMeans" in "Matrix" Creating a new generic function for "rowSums" in "Matrix" Creating a new generic function for "rowMeans" in "Matrix" Creating a new generic function for "as.matrix" in "Matrix" Creating a new generic function for "as.array" in "Matrix" Creating a new generic function for "head" in "Matrix" Creating a new generic function for "tail" in "Matrix" Creating a new generic function for "drop" in "Matrix" Creating a new generic function for "as.vector" in "Matrix" Creating a new generic function for "as.numeric" in "Matrix" Creating a new generic function for "as.logical" in "Matrix" Creating a new generic function for "isSymmetric" in "Matrix" Creating a new generic function for "unname" in "Matrix" Creating a new generic function for "solve" in "Matrix" Creating a new generic function for "kronecker" in "Matrix" Creating a new generic function for "determinant" in "Matrix" Creating a new generic function for "diff" in "Matrix" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csc" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csc" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.coo" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.coo" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.coo" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csc" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.coo" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.coo" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csc" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.coo" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csc" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csr" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.coo" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "matrix.csc" Creating a new generic function for "zapsmall" in "Matrix" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graphAM" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graph" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graphNEL" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graphNEL" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graph" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graphNEL" Warning in matchSignature(signature, fdef, where) : in the method signature for function "coerce" no definition for class: "graphNEL" Creating a new generic function for "qr.qy" in "Matrix" Creating a new generic function for "qr.qty" in "Matrix" Creating a new generic function for "qr.coef" in "Matrix" Creating a new generic function for "qr.resid" in "Matrix" Creating a new generic function for "qr.fitted" in "Matrix" ** help >>> Building/Updating help pages for package 'Matrix' Formats: text html latex example CAex text html latex example CHMfactor-class text html latex Cholesky-class text html latex example Cholesky text html latex example CsparseMatrix-class text html latex example Diagonal text html latex example Hilbert text html latex example KNex text html latex example LU-class text html latex example Matrix-class text html latex example Matrix text html latex example MatrixFactorization-class text html latex example RsparseMatrix-class text html latex example Schur text html latex example SparseM-conv text html latex Subassign-methods text html latex example TsparseMatrix-class text html latex example Xtrct-methods text html latex example all-methods text html latex example atomicVector-class text html latex example band text html latex example bdiag text html latex example cBind text html latex example compMatrix-class text html latex dCholCMatrix-class text html latex example dMatrix-class text html latex example ddenseMatrix-class text html latex example ddiMatrix-class text html latex example denseMatrix-class text html latex example dgCMatrix-class text html latex example dgRMatrix-class text html latex dgTMatrix-class text html latex example dgeMatrix-class text html latex diagonalMatrix-class text html latex example dpoMatrix-class text html latex example dsCMatrix-class text html latex example dsRMatrix-class text html latex example dsparseMatrix-class text html latex example dsyMatrix-class text html latex example dtCMatrix-class text html latex example dtRMatrix-class-def text html latex example dtpMatrix-class text html latex example dtrMatrix-class text html latex example expand text html latex example expm text html latex example externalFormats text html latex example facmul text html latex example generalMatrix-class text html latex index-class text html latex example isSymmetric-methods text html latex kronecker-methods text html latex ldenseMatrix-class text html latex example ldiMatrix-class text html latex example lgeMatrix-class text html latex example lsparseMatrix-classes text html latex example lsyMatrix-class text html latex example ltrMatrix-class text html latex example lu text html latex example nMatrix-class text html latex example ndenseMatrix-class text html latex example ngeMatrix-class text html latex example nnzero text html latex example norm text html latex example nsparseMatrix-classes text html latex example nsyMatrix-class text html latex example ntrMatrix-class text html latex example pMatrix-class text html latex example qr-methods text html latex rcond text html latex example replValue-class text html latex example sparseLU-class text html latex example sparseMatrix-class text html latex example sparseQR-class text html latex example symmetricMatrix-class text html latex example tcrossprod text html latex example triangularMatrix-class text html latex example unpack text html latex example unused-classes text html latex example ** building package indices ... Loading required package: Matrix Loading required package: stats Loading required package: methods Loading required package: lattice make[1]: Entering directory `/build/buildd/rmatrix-0.99875-1/src' make[2]: Entering directory `/build/buildd/rmatrix-0.99875-1/src/CHOLMOD' ( cd Lib ; make clean ) make[3]: Entering directory `/build/buildd/rmatrix-0.99875-1/src/CHOLMOD/Lib' make[3]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src/CHOLMOD/Lib' make[2]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src/CHOLMOD' make[2]: Entering directory `/build/buildd/rmatrix-0.99875-1/src/COLAMD' make[2]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src/COLAMD' make[2]: Entering directory `/build/buildd/rmatrix-0.99875-1/src/AMD' ( cd Source ; make clean ) make[3]: Entering directory `/build/buildd/rmatrix-0.99875-1/src/AMD/Source' make[3]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src/AMD/Source' make[2]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src/AMD' make[1]: Leaving directory `/build/buildd/rmatrix-0.99875-1/src' * DONE (Matrix) rm -vf /build/buildd/rmatrix-0.99875-1/debian/r-cran-matrix/usr/lib/R/site-library/R.css \ /build/buildd/rmatrix-0.99875-1/debian/r-cran-matrix/usr/lib/R/site-library/matrix/COPYING \ /build/buildd/rmatrix-0.99875-1/debian/r-cran-matrix/usr/lib/R/site-library/matrix/LICENSE.txt removed `/build/buildd/rmatrix-0.99875-1/debian/r-cran-matrix/usr/lib/R/site-library/R.css' if test -f debian/overrides; then \ install -d /build/buildd/rmatrix-0.99875-1/debian/r-cran-matrix/usr/share/lintian/overrides ; \ install -m 0644 debian/overrides \ /build/buildd/rmatrix-0.99875-1/debian/r-cran-matrix/usr/share/lintian/overrides/r-cran-matrix; \ fi dh_installdirs -pr-cran-matrix dh_installdocs -pr-cran-matrix ./TODO dh_installexamples -pr-cran-matrix dh_installman -pr-cran-matrix dh_installinfo -pr-cran-matrix dh_installmenu -pr-cran-matrix dh_installcron -pr-cran-matrix dh_installinit -pr-cran-matrix dh_installdebconf -pr-cran-matrix dh_installemacsen -pr-cran-matrix dh_installcatalogs -pr-cran-matrix dh_installpam -pr-cran-matrix dh_installlogrotate -pr-cran-matrix dh_installlogcheck -pr-cran-matrix dh_installmime -pr-cran-matrix dh_installchangelogs -pr-cran-matrix ./ChangeLog dh_installudev -pr-cran-matrix dh_install -pr-cran-matrix dh_link -pr-cran-matrix dh_strip -pr-cran-matrix dh_strip debug symbol extraction: all non-arch-all packages for this build platform sparc: r-cran-matrix dh_strip debug symbol extraction: packages to act on: r-cran-matrix dh_strip debug symbol extraction: ignored packages: pkgstriptranslations: processing control file: ./debian/r-cran-matrix-dbgsym/DEBIAN/control, package r-cran-matrix-dbgsym, directory ./debian/r-cran-matrix-dbgsym pkgstriptranslations: r-cran-matrix-dbgsym does not contain translations, skipping pkgstriptranslations: preparing translation tarball rmatrix_0.99875-1-1_sparc_translations.tar.gz...done (2 files) pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `/build/buildd/rmatrix-0.99875-1/debian/r-cran-matrix-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `r-cran-matrix-dbgsym' in `../r-cran-matrix-dbgsym_0.99875-1-1_sparc.ddeb'. dh_compress -pr-cran-matrix dh_fixperms -pr-cran-matrix dh_makeshlibs -pr-cran-matrix dh_installdeb -pr-cran-matrix dh_perl -pr-cran-matrix dh_shlibdeps -pr-cran-matrix dpkg-shlibdeps: warning: format of `NEEDED libRlapack.so' not recognized dpkg-shlibdeps: warning: format of `NEEDED libRblas.so' not recognized dpkg-shlibdeps: warning: format of `NEEDED libR.so' not recognized dh_gencontrol -pr-cran-matrix dh_md5sums -pr-cran-matrix dh_builddeb -pr-cran-matrix pkgstriptranslations: processing control file: ./debian/r-cran-matrix/DEBIAN/control, package r-cran-matrix, directory ./debian/r-cran-matrix pkgstriptranslations: r-cran-matrix does not contain translations, skipping pkgstriptranslations: tarball already exists pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `debian/r-cran-matrix/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `r-cran-matrix' in `../r-cran-matrix_0.99875-1-1_sparc.deb'. dpkg-genchanges -B -mUbuntu/sparc Build Daemon dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20070518-1846 Publishing chroot-autobuild/build/buildd/rmatrix_0.99875-1-1_sparc_translations.tar.gz for rosetta. Publishing debug debs. chroot-autobuild/build/buildd/r-cran-matrix_0.99875-1-1_sparc.deb: new debian package, version 2.0. size 1401668 bytes: control archive= 10106 bytes. 684 bytes, 15 lines control 30036 bytes, 351 lines md5sums Package: r-cran-matrix Version: 0.99875-1-1 Section: math Priority: optional Architecture: sparc Depends: libc6 (>= 2.5-5), libgfortran1 (>= 4.1.2), r-base-core (>= 2.5.0), r-cran-lattice (>= 0.12-11.1) Installed-Size: 3780 Maintainer: Ubuntu MOTU Developers Original-Maintainer: Dirk Eddelbuettel Source: rmatrix Description: GNU R package of classes for dense and sparse matrices This CRAN package provides S4 classes and methods for numerical linear algebra using dense or sparse matrices. The sparse matrix implementation uses code from the LDL sparse matrix package and code from the Metis package of partitioning algorithms. chroot-autobuild/build/buildd/r-cran-matrix_0.99875-1-1_sparc.deb: drwxr-xr-x root/root 0 2007-05-18 18:46:36 ./ drwxr-xr-x root/root 0 2007-05-18 18:46:35 ./usr/ drwxr-xr-x root/root 0 2007-05-18 18:43:14 ./usr/lib/ drwxr-xr-x root/root 0 2007-05-18 18:43:14 ./usr/lib/R/ drwxr-xr-x root/root 0 2007-05-18 18:46:35 ./usr/lib/R/site-library/ drwxr-xr-x root/root 0 2007-05-18 18:46:28 ./usr/lib/R/site-library/Matrix/ -rw-r--r-- root/root 4814 2007-05-18 18:43:14 ./usr/lib/R/site-library/Matrix/NAMESPACE -rw-r--r-- root/root 1047 2007-05-18 18:43:15 ./usr/lib/R/site-library/Matrix/DESCRIPTION drwxr-xr-x root/root 0 2007-05-18 18:46:34 ./usr/lib/R/site-library/Matrix/Meta/ -rw-r--r-- root/root 1009 2007-05-18 18:43:15 ./usr/lib/R/site-library/Matrix/Meta/package.rds -rw-r--r-- root/root 8276 2007-05-18 18:46:28 ./usr/lib/R/site-library/Matrix/Meta/Rd.rds 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root/root 0 2007-05-18 18:46:35 ./usr/share/doc/ drwxr-xr-x root/root 0 2007-05-18 18:46:42 ./usr/share/doc/r-cran-matrix/ -rw-r--r-- root/root 1462 2007-05-18 18:43:12 ./usr/share/doc/r-cran-matrix/copyright -rw-r--r-- root/root 19978 2007-05-14 14:17:37 ./usr/share/doc/r-cran-matrix/changelog.gz -rw-r--r-- root/root 2771 2007-05-08 13:25:57 ./usr/share/doc/r-cran-matrix/TODO.gz -rw-r--r-- root/root 1669 2007-05-18 18:43:12 ./usr/share/doc/r-cran-matrix/changelog.Debian.gz rmatrix_0.99875-1-1_sparc.changes: Format: 1.7 Date: Tue, 15 May 2007 18:10:07 -0500 Source: rmatrix Binary: r-cran-matrix Architecture: sparc_translations sparc Version: 0.99875-1-1 Distribution: autobuild Urgency: low Maintainer: Ubuntu/sparc Build Daemon Changed-By: Dirk Eddelbuettel Description: r-cran-matrix - GNU R package of classes for dense and sparse matrices Changes: rmatrix (0.99875-1-1) unstable; urgency=low . * New upstream release Files: 07185f267e020fce9e348629c677d49c 4371 raw-translations - rmatrix_0.99875-1-1_sparc_translations.tar.gz e99f32d571f623fd73bcd02ea361390b 1401668 math optional r-cran-matrix_0.99875-1-1_sparc.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/rmatrix-0.99875-1 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --root=/home/buildd/build-336128-737621/chroot-autobuild --purge libx11-data unzip readline-common gettext file zlib1g-dev libxt6 libgmp3c2 libxdmcp6 libg2c0 x11-common refblas3 po-debconf libpaper1 cpp-3.4 g77 gfortran refblas3-dev r-base-core zip libpcre3-dev libpaper-utils libpng12-0 libjpeg62 libbz2-dev libmpfr1 libice6 intltool-debian tk8.4 gfortran-4.1 ucf cdbs gcc-3.4 html2text libg2c0-dev libjpeg62-dev gettext-base debhelper libgfortran1 libpng12-dev libncurses5-dev libsm6 libreadline5 libmagic1 libreadline5-dev libbz2-1.0 gcc-3.4-base libxau6 libpcrecpp0 libpcre3 r-base-dev g77-3.4 libx11-6 tcl8.4 r-cran-lattice (Reading database ... 15587 files and directories currently installed.) Removing cdbs ... Removing debhelper ... Removing r-base-dev ... Removing r-cran-lattice ... Removing file ... Purging configuration files for file ... Removing po-debconf ... Removing gfortran ... Removing refblas3-dev ... Removing r-base-core ... Purging configuration files for r-base-core ... Removing zip ... Removing libpcre3-dev ... Removing libpaper-utils ... Removing libbz2-dev ... Removing intltool-debian ... Removing tk8.4 ... Purging configuration files for tk8.4 ... Removing gfortran-4.1 ... Removing html2text ... Purging configuration files for html2text ... Removing libjpeg62-dev ... Removing libgfortran1 ... Purging configuration files for libgfortran1 ... Removing libpng12-dev ... Removing libmagic1 ... Purging configuration files for libmagic1 ... Removing libreadline5-dev ... Removing libbz2-1.0 ... Purging configuration files for libbz2-1.0 ... Removing libpcrecpp0 ... Purging configuration files for libpcrecpp0 ... Removing libpcre3 ... Purging configuration files for libpcre3 ... Removing tcl8.4 ... Purging configuration files for tcl8.4 ... Removing unzip ... Removing gettext ... Removing zlib1g-dev ... Removing libxt6 ... Purging configuration files for libxt6 ... Removing refblas3 ... Purging configuration files for refblas3 ... Removing libpaper1 ... Purging configuration files for libpaper1 ... Removing g77 ... Removing libpng12-0 ... Purging configuration files for libpng12-0 ... Removing libjpeg62 ... Removing libmpfr1 ... Purging configuration files for libmpfr1 ... Removing ucf ... Purging configuration files for ucf ... Removing gettext-base ... Removing libncurses5-dev ... Removing libsm6 ... Purging configuration files for libsm6 ... Removing libreadline5 ... Purging configuration files for libreadline5 ... Removing g77-3.4 ... Removing libx11-6 ... Purging configuration files for libx11-6 ... Removing libx11-data ... Removing readline-common ... Purging configuration files for readline-common ... Removing libgmp3c2 ... Purging configuration files for libgmp3c2 ... Removing libxdmcp6 ... Purging configuration files for libxdmcp6 ... Removing libice6 ... Purging configuration files for libice6 ... Removing gcc-3.4 ... Removing libg2c0-dev ... Removing libxau6 ... Purging configuration files for libxau6 ... Removing libg2c0 ... Purging configuration files for libg2c0 ... Removing x11-common ... Purging configuration files for x11-common ... Removing cpp-3.4 ... Removing gcc-3.4-base ... ****************************************************************************** Finished at 20070518-1847 Build needed 00:03:35, 9608k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '336128-737621'] Scanning for processes to kill in build 336128-737621... Scanning for processes to kill in build /home/buildd/build-336128-737621/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '336128-737621'] Unmounting chroot for build 336128-737621... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '336128-737621'] Removing build 336128-737621