rna-star 2.5.4b+dfsg-1 source package in Ubuntu

Changelog

rna-star (2.5.4b+dfsg-1) unstable; urgency=medium

  * New upstream release.
  * Respect nocheck flag in test override.

 -- Sascha Steinbiss <email address hidden>  Sun, 11 Feb 2018 13:37:19 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
amd64 arm64 ppc64el mips64el
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Bionic release universe misc

Downloads

File Size SHA-256 Checksum
rna-star_2.5.4b+dfsg-1.dsc 2.1 KiB 12f49265422497be26ce08327e3d3fe2e7d14c91c26b26b91c238f8a725a6ab9
rna-star_2.5.4b+dfsg.orig.tar.xz 335.0 KiB 5f9bf4bb5338d8c75984b668d945a1b49f35ca38be54d6cf2e4fc9ceb877edb1
rna-star_2.5.4b+dfsg-1.debian.tar.xz 367.2 KiB 332414338de10b973173e3a5de57dac862728ca29a65525ad0376eddaf47fb1f

Available diffs

No changes file available.

Binary packages built by this source

rna-star: ultrafast universal RNA-seq aligner

 Spliced Transcripts Alignment to a Reference (STAR) software based on a
 previously undescribed RNA-seq alignment algorithm that uses sequential
 maximum mappable seed search in uncompressed suffix arrays followed by
 seed clustering and stitching procedure. STAR outperforms other aligners
 by a factor of >50 in mapping speed, aligning to the human genome 550
 million 2 × 76 bp paired-end reads per hour on a modest 12-core server,
 while at the same time improving alignment sensitivity and precision. In
 addition to unbiased de novo detection of canonical junctions, STAR can
 discover non-canonical splices and chimeric (fusion) transcripts, and is
 also capable of mapping full-length RNA sequences. Using Roche 454
 sequencing of reverse transcription polymerase chain reaction amplicons,
 the authors experimentally validated 1960 novel intergenic splice
 junctions with an 80-90% success rate, corroborating the high precision
 of the STAR mapping strategy.

rna-star-dbgsym: debug symbols for rna-star