Ubuntu
seer package

seer 1.1.4-5 source package in Ubuntu

Changelog

seer (1.1.4-5) unstable; urgency=medium

  * Team Upload.
  * debian/patches/gcc11.patch: Fix gcc-11 FTBFS (Closes: #984328)

 -- Nilesh Patra <email address hidden>  Thu, 04 Mar 2021 06:33:51 +0530

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
seer_1.1.4-5.dsc 2.0 KiB fe6dc957077eb0138a6a4fbb894f04f2a0644d6b0e43b8e7843980c500b94a09
seer_1.1.4.orig.tar.gz 949.4 KiB 96e55b9fe2cde089ff05bbcd55088832e90f44a968a81a8dca9f9cffa6faa9c1
seer_1.1.4-5.debian.tar.xz 8.3 KiB d8224022efe9bdcae52e9e115e6069258d9f96e57c517923c89cc4a99a9c3696

No changes file available.

Binary packages built by this source

seer: genomic sequence element (kmer) enrichment analysis

 Bacterial genomes vary extensively in terms of both gene content and
 gene sequence - this plasticity hampers the use of traditional SNP-based
 methods for identifying all genetic associations with phenotypic
 variation. SEER provides a computationally scalable and widely
 applicable statistical method for the identification of sequence
 elements that are significantly enriched in a phenotype of interest.
 SEER is applicable to even tens of thousands of genomes by counting variable-
 length k-mers using a distributed string-mining algorithm. Robust
 options are provided for association analysis that also correct for the
 clonal population structure of bacteria. Using large collections of
 genomes of the major human pathogen Streptococcus pneumoniae, SEER
 identifies relevant previously characterised resistance determinants for
 several antibiotics.

seer-dbgsym: No summary available for seer-dbgsym in ubuntu impish.

No description available for seer-dbgsym in ubuntu impish.