sga 0.10.15-2 source package in Ubuntu


sga (0.10.15-2) unstable; urgency=medium

  * Recommends: abyss which is now in main
  * debhelper 10
  * d/watch: version=4

 -- Andreas Tille <email address hidden>  Fri, 13 Jan 2017 15:19:48 +0100

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Uploaded by:
Debian Med on 2017-01-13
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Artful release on 2017-04-20 universe misc
Zesty release on 2017-01-14 universe misc


File Size SHA-256 Checksum
sga_0.10.15-2.dsc 2.0 KiB 75a3711da342dcebe6fa6ce74cd524474f7fc979ca90561e9901b15a27a6e95d
sga_0.10.15.orig.tar.gz 6.3 MiB 1b18996e6ec47985bc4889a8cbc3cd4dd3a8c7d385ae9f450bd474e36342558b
sga_0.10.15-2.debian.tar.xz 205.4 KiB 86b1a1239526981e91e6535836b11ebee566479cf24635628f181a51ad2490cd

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Binary packages built by this source

sga: de novo genome assembler that uses string graphs

 The major goal of SGA is to be very memory efficient, which is achieved by
 using a compressed representation of DNA sequence reads.
 SGA is a de novo assembler for DNA sequence reads. It is based on Gene Myers'
 string graph formulation of assembly and uses the FM-index/Burrows-Wheeler
 transform to efficiently find overlaps between sequence reads.