RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '820429-1912710', '/home/buildd/filecache-default/449428560bf4a1aca5978b63d0be29a4cb5d316b'] Synching the system clock with the buildd NTP service... 23 Dec 14:09:32 ntpdate[10915]: adjust time server 10.122.37.1 offset 0.000030 sec Unpacking chroot for build 820429-1912710 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '820429-1912710'] Mounting chroot for build 820429-1912710 RUN: /usr/share/launchpad-buildd/slavebin/apply-ogre-model ['apply-ogre-model', '820429-1912710', 'universe'] Attempting OGRE for universe in build-820429-1912710 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '820429-1912710', 'deb http://ftpmaster.internal/ubuntu jaunty main universe'] Overriding sources.list in build-820429-1912710 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '820429-1912710'] Updating debian chroot for build 820429-1912710 Get:1 http://ftpmaster.internal jaunty Release.gpg [189B] Get:2 http://ftpmaster.internal jaunty Release [74.6kB] Get:3 http://ftpmaster.internal jaunty/main Packages [1269kB] Get:4 http://ftpmaster.internal jaunty/universe Packages [4664kB] Fetched 6008kB in 7s (844kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: cpp-4.3 debconf debconf-english fakeroot g++-4.3 gcc-4.3 gcc-4.3-base libgcc1 libgomp1 libpam-foreground libstdc++6 libstdc++6-4.3-dev perl perl-base perl-modules python2.5-minimal 16 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 0B/21.5MB of archives. After unpacking 20.5kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! perl-modules perl perl-base debconf-english debconf libgomp1 cpp-4.3 gcc-4.3-base libgcc1 gcc-4.3 g++-4.3 libstdc++6-4.3-dev libstdc++6 python2.5-minimal fakeroot libpam-foreground Authentication warning overridden. (Reading database ... 10102 files and directories currently installed.) Preparing to replace perl-modules 5.10.0-17ubuntu2 (using .../perl-modules_5.10.0-18ubuntu1_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace perl 5.10.0-17ubuntu2 (using .../perl_5.10.0-18ubuntu1_powerpc.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.10.0-17ubuntu2 (using .../perl-base_5.10.0-18ubuntu1_powerpc.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.10.0-18ubuntu1) ... (Reading database ... 10102 files and directories currently installed.) Preparing to replace debconf-english 1.5.24ubuntu1 (using .../debconf-english_1.5.24ubuntu2_all.deb) ... Unpacking replacement debconf-english ... Preparing to replace debconf 1.5.24ubuntu1 (using .../debconf_1.5.24ubuntu2_all.deb) ... Unpacking replacement debconf ... Preparing to replace libgomp1 4.3.2-2ubuntu6 (using .../libgomp1_4.3.2-2ubuntu9_powerpc.deb) ... Unpacking replacement libgomp1 ... Preparing to replace cpp-4.3 4.3.2-2ubuntu6 (using .../cpp-4.3_4.3.2-2ubuntu9_powerpc.deb) ... Unpacking replacement cpp-4.3 ... Preparing to replace gcc-4.3-base 4.3.2-2ubuntu6 (using .../gcc-4.3-base_4.3.2-2ubuntu9_powerpc.deb) ... Unpacking replacement gcc-4.3-base ... Preparing to replace libgcc1 1:4.3.2-2ubuntu6 (using .../libgcc1_1%3a4.3.2-2ubuntu9_powerpc.deb) ... Unpacking replacement libgcc1 ... Setting up gcc-4.3-base (4.3.2-2ubuntu9) ... Setting up libgcc1 (4.3.2-2ubuntu9) ... (Reading database ... 10102 files and directories currently installed.) Preparing to replace gcc-4.3 4.3.2-2ubuntu6 (using .../gcc-4.3_4.3.2-2ubuntu9_powerpc.deb) ... Unpacking replacement gcc-4.3 ... Preparing to replace g++-4.3 4.3.2-2ubuntu6 (using .../g++-4.3_4.3.2-2ubuntu9_powerpc.deb) ... Unpacking replacement g++-4.3 ... Preparing to replace libstdc++6-4.3-dev 4.3.2-2ubuntu6 (using .../libstdc++6-4.3-dev_4.3.2-2ubuntu9_powerpc.deb) ... Unpacking replacement libstdc++6-4.3-dev ... Preparing to replace libstdc++6 4.3.2-2ubuntu6 (using .../libstdc++6_4.3.2-2ubuntu9_powerpc.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.3.2-2ubuntu9) ... (Reading database ... 10102 files and directories currently installed.) Preparing to replace python2.5-minimal 2.5.2-14ubuntu1 (using .../python2.5-minimal_2.5.3-0ubuntu1_powerpc.deb) ... Unpacking replacement python2.5-minimal ... Setting up python2.5-minimal (2.5.3-0ubuntu1) ... (Reading database ... 10102 files and directories currently installed.) Preparing to replace fakeroot 1.11ubuntu1 (using .../fakeroot_1.11.4ubuntu1_powerpc.deb) ... Unpacking replacement fakeroot ... Preparing to replace libpam-foreground 0.4-1 (using .../libpam-foreground_0.5_powerpc.deb) ... Unpacking replacement libpam-foreground ... Setting up libgomp1 (4.3.2-2ubuntu9) ... Setting up cpp-4.3 (4.3.2-2ubuntu9) ... Setting up gcc-4.3 (4.3.2-2ubuntu9) ... Setting up fakeroot (1.11.4ubuntu1) ... Setting up libpam-foreground (0.5) ... Setting up debconf-english (1.5.24ubuntu2) ... Setting up perl-modules (5.10.0-18ubuntu1) ... Setting up debconf (1.5.24ubuntu2) ... Setting up g++-4.3 (4.3.2-2ubuntu9) ... Setting up perl (5.10.0-18ubuntu1) ... Setting up libstdc++6-4.3-dev (4.3.2-2ubuntu9) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '820429-1912710', '--nolog', '--batch', '--archive=ubuntu', '--purpose=PRIMARY', '--dist=jaunty', '--comp=universe', 'shogun_0.6.7-1ubuntu1.dsc'] Initiating build Automatic build of shogun_0.6.7-1ubuntu1 on adare by sbuild/powerpc 1.170.5 Build started at 20081223-1410 ****************************************************************************** shogun_0.6.7-1ubuntu1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: libatlas-base-dev [!powerpc !alpha !arm !armel !lpia] | liblapack-dev, debhelper (>= 5), libreadline5-dev, octave3.0-headers (>= 1:3.0.0-4), python-all-dev, ghostscript, python-central (>= 0.5), python-numpy (>= 1:1.0.4-5), cdbs, r-base-core (>= 2.6.1-2), libblas-dev, swig (>= 1.3.36), xutils-dev, doxygen, graphviz, quilt, texlive-latex-base Checking for already installed source dependencies... liblapack-dev: missing debhelper: missing libreadline5-dev: missing octave3.0-headers: missing python-all-dev: missing ghostscript: missing python-central: missing python-numpy: missing cdbs: missing r-base-core: missing libblas-dev: missing swig: missing xutils-dev: missing doxygen: missing graphviz: missing quilt: missing texlive-latex-base: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install liblapack-dev debhelper libreadline5-dev octave3.0-headers python-all-dev ghostscript python-central python-numpy cdbs r-base-core libblas-dev swig xutils-dev doxygen graphviz quilt texlive-latex-base Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: upstart-compat-sysv startup-tasks system-services upstart Use 'apt-get autoremove' to remove them. The following extra packages will be installed: autoconf automake autotools-dev bsdmainutils ca-certificates defoma diffstat ed fdupes file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.3 groff-base gsfonts html2text intltool intltool-debian libatlas-base-dev libatlas-headers libatlas3gf-base libblas3gf libcairo2 libcroco3 libcups2 libcupsimage2 libcurl3-gnutls libdatrie0 libdb4.2 libdirectfb-1.0-0 libexpat1 libfftw3-3 libfftw3-dev libfontconfig1 libfreetype6 libgcrypt11 libgd2-noxpm libgfortran3 libglib2.0-0 libglpk0 libgnutls26 libgpg-error0 libgraphviz4 libgs8 libhdf5-serial-1.6.6-0 libhdf5-serial-dev libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libice6 libidn11 libjpeg62 libjpeg62-dev libkeyutils1 libkpathsea4 libkrb53 liblapack3gf libldap-2.4-2 libltdl7 libmagic1 libncurses5-dev libncursesw5 libnewt0.52 libpango1.0-0 libpango1.0-common libpaper-utils libpaper1 libpixman-1-0 libpng12-0 libpoppler3 libpopt0 libqhull5 libreadline5 libsasl2-2 libsasl2-modules libsm6 libsqlite3-0 libssl0.9.8 libsuitesparse-3.1.0 libsysfs2 libtasn1-3 libthai-data libthai0 libtiff4 libts-0.0-0 liburi-perl libwww-perl libx11-6 libx11-data libxau6 libxaw7 libxcb-render-util0 libxcb-render0 libxcb-xlib0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl libxml2 libxmu6 libxpm4 libxrender1 libxss1 libxt6 m4 man-db mime-support netbase octave3.0 openssl po-debconf python python-all python-dev python2.4 python2.4-dev python2.4-minimal python2.5 python2.5-dev readline-common tcl8.5 tex-common texinfo texlive-base texlive-base-bin texlive-common texlive-doc-base tk8.5 ttf-dejavu ttf-dejavu-core ttf-dejavu-extra unzip whiptail x11-common zip zlib1g-dev Suggested packages: autoconf2.13 autobook autoconf-archive gnu-standards autoconf-doc libtool wamerican wordlist whois vacation devscripts doc-base dh-make defoma-doc psfontmgr x-ttcidfont-conf dfontmgr libft-perl doxygen-doc doxygen-gui cvs gettext-doc gfortran-multilib gfortran-doc gfortran-4.3-multilib gfortran-4.3-doc libgfortran3-dbg ghostscript-x hpijs graphviz-doc groff libblas-doc liblapack-doc libatlas3gf-altivec cups-common libfreetype6-dev rng-tools libgd-tools libiodbc2-dev libmysqlclient15-dev gnutls-bin libhdf5-doc libdata-dump-perl krb5-doc krb5-user ttf-japanese-gothic ttf-japanese-mincho ttf-thryomanes ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp libsasl2-modules-otp libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit libsasl2-modules-gssapi-heimdal libio-socket-ssl-perl less www-browser octave3.0-info octave3.0-doc octave3.0-htmldoc octave3.0-emacsen openssl-doc libmail-box-perl python-doc python-tk python-profiler python-numpy-doc python-numpy-dbg python2.4-doc binfmt-support python2.5-doc procmail r-doc-info r-doc-pdf r-doc-html r-mathlib r-base-html r-base-latex swig-examples swig-doc tclreadline texinfo-doc-nonfree texlive-generic-recommended perl-tk xpdf-reader pdf-viewer gv postscript-viewer Recommended packages: curl wget lynx ttf-liberation libglib2.0-data libgpm2 libfribidi0 libmailtools-perl libhtml-format-perl libcompress-zlib-perl xml-core ifupdown gnuplot libmail-sendmail-perl r-recommended r-base-dev dvipdfmx lmodern texlive-base-bin-doc texlive-latex-base-doc xterm x-terminal-emulator The following NEW packages will be installed: autoconf automake autotools-dev bsdmainutils ca-certificates cdbs debhelper defoma diffstat doxygen ed fdupes file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.3 ghostscript graphviz groff-base gsfonts html2text intltool intltool-debian libatlas-base-dev libatlas-headers libatlas3gf-base libblas-dev libblas3gf libcairo2 libcroco3 libcups2 libcupsimage2 libcurl3-gnutls libdatrie0 libdb4.2 libdirectfb-1.0-0 libexpat1 libfftw3-3 libfftw3-dev libfontconfig1 libfreetype6 libgcrypt11 libgd2-noxpm libgfortran3 libglib2.0-0 libglpk0 libgnutls26 libgpg-error0 libgraphviz4 libgs8 libhdf5-serial-1.6.6-0 libhdf5-serial-dev libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libice6 libidn11 libjpeg62 libjpeg62-dev libkeyutils1 libkpathsea4 libkrb53 liblapack-dev liblapack3gf libldap-2.4-2 libltdl7 libmagic1 libncurses5-dev libncursesw5 libnewt0.52 libpango1.0-0 libpango1.0-common libpaper-utils libpaper1 libpixman-1-0 libpng12-0 libpoppler3 libpopt0 libqhull5 libreadline5 libreadline5-dev libsasl2-2 libsasl2-modules libsm6 libsqlite3-0 libssl0.9.8 libsuitesparse-3.1.0 libsysfs2 libtasn1-3 libthai-data libthai0 libtiff4 libts-0.0-0 liburi-perl libwww-perl libx11-6 libx11-data libxau6 libxaw7 libxcb-render-util0 libxcb-render0 libxcb-xlib0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl libxml2 libxmu6 libxpm4 libxrender1 libxss1 libxt6 m4 man-db mime-support netbase octave3.0 octave3.0-headers openssl po-debconf python python-all python-all-dev python-central python-dev python-numpy python2.4 python2.4-dev python2.4-minimal python2.5 python2.5-dev quilt r-base-core readline-common swig tcl8.5 tex-common texinfo texlive-base texlive-base-bin texlive-common texlive-doc-base texlive-latex-base tk8.5 ttf-dejavu ttf-dejavu-core ttf-dejavu-extra unzip whiptail x11-common xutils-dev zip zlib1g-dev 0 upgraded, 157 newly installed, 0 to remove and 0 not upgraded. Need to get 44.7MB/124MB of archives. After unpacking 373MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! x11-common libice6 libsm6 libxau6 libxdmcp6 libxcb1 libxcb-xlib0 libx11-data libx11-6 libxt6 xutils-dev libssl0.9.8 openssl ca-certificates libmagic1 file libgpg-error0 libgcrypt11 libtasn1-3 libgnutls26 libidn11 libkeyutils1 libkrb53 libsasl2-modules libsasl2-2 libldap-2.4-2 libcurl3-gnutls libncursesw5 libnewt0.52 libpopt0 readline-common libreadline5 libsqlite3-0 mime-support netbase libdb4.2 python2.5 python whiptail bsdmainutils ed gettext-base groff-base libexpat1 libhtml-tagset-perl liburi-perl libhtml-parser-perl libhtml-tree-perl libwww-perl libxext6 libxml-parser-perl libxml2 man-db python-central m4 autoconf autotools-dev automake html2text libglib2.0-0 libcroco3 gettext intltool-debian po-debconf debhelper fdupes intltool cdbs defoma diffstat libpng12-0 doxygen libfreetype6 ttf-dejavu-core ttf-dejavu-extra ttf-dejavu fontconfig-config libfontconfig1 fontconfig libgfortran3 gfortran-4.3 gfortran libcups2 libjpeg62 libtiff4 libcupsimage2 libpaper1 libgs8 gsfonts ghostscript libgd2-noxpm libsysfs2 libts-0.0-0 libdirectfb-1.0-0 libpixman-1-0 libxcb-render0 libxcb-render-util0 libxrender1 libcairo2 libltdl7 libpango1.0-common libdatrie0 libthai-data libthai0 libxft2 libpango1.0-0 libgraphviz4 libxmu6 libxpm4 libxaw7 graphviz libatlas3gf-base libblas3gf libblas-dev libatlas-headers libatlas-base-dev libfftw3-3 libfftw3-dev libglpk0 libhdf5-serial-1.6.6-0 libjpeg62-dev zlib1g-dev libhdf5-serial-dev libkpathsea4 liblapack3gf liblapack-dev libncurses5-dev libpaper-utils libpoppler3 libqhull5 libreadline5-dev libsuitesparse-3.1.0 libxss1 texinfo octave3.0 octave3.0-headers python2.4-minimal python2.4 python-all python2.5-dev python-dev python2.4-dev python-all-dev python-numpy quilt zip unzip tcl8.5 tk8.5 r-base-core swig tex-common texlive-common texlive-doc-base texlive-base-bin texlive-base texlive-latex-base Authentication warning overridden. Get:1 http://ftpmaster.internal jaunty/main xutils-dev 1:7.4+4 [307kB] Get:2 http://ftpmaster.internal jaunty/main graphviz 2.20.2-3ubuntu1 [456kB] Get:3 http://ftpmaster.internal jaunty/universe libatlas3gf-base 3.6.0-22ubuntu1 [8565kB] Get:4 http://ftpmaster.internal jaunty/universe libatlas-headers 3.6.0-22ubuntu1 [22.0kB] Get:5 http://ftpmaster.internal jaunty/universe libatlas-base-dev 3.6.0-22ubuntu1 [9563kB] Get:6 http://ftpmaster.internal jaunty/main libfftw3-3 3.1.2-3.1ubuntu1 [1550kB] Get:7 http://ftpmaster.internal jaunty/main libfftw3-dev 3.1.2-3.1ubuntu1 [1870kB] Get:8 http://ftpmaster.internal jaunty/universe libglpk0 4.29-2 [372kB] Get:9 http://ftpmaster.internal jaunty/universe libhdf5-serial-1.6.6-0 1.6.6-4ubuntu1 [702kB] Get:10 http://ftpmaster.internal jaunty/universe libhdf5-serial-dev 1.6.6-4ubuntu1 [941kB] Get:11 http://ftpmaster.internal jaunty/universe libqhull5 2003.1-11 [160kB] Get:12 http://ftpmaster.internal jaunty/main libsuitesparse-3.1.0 1:3.1.0-3.1 [1037kB] Get:13 http://ftpmaster.internal jaunty/universe octave3.0 1:3.0.1-6ubuntu1 [8185kB] Get:14 http://ftpmaster.internal jaunty/universe octave3.0-headers 1:3.0.1-6ubuntu1 [408kB] Get:15 http://ftpmaster.internal jaunty/universe r-base-core 2.8.1~20081219-1 [10.5MB] Fetched 44.7MB in 5s (8026kB/s) Selecting previously deselected package x11-common. (Reading database ... 10104 files and directories currently installed.) Unpacking x11-common (from .../x11-common_1%3a7.4~5ubuntu9_all.deb) ... Selecting previously deselected package libice6. Unpacking libice6 (from .../libice6_2%3a1.0.4-1_powerpc.deb) ... Selecting previously deselected package libsm6. Unpacking libsm6 (from .../libsm6_2%3a1.1.0-1_powerpc.deb) ... Selecting previously deselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.3-3_powerpc.deb) ... Selecting previously deselected package libxdmcp6. Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.0.2-3_powerpc.deb) ... Selecting previously deselected package libxcb1. Unpacking libxcb1 (from .../libxcb1_1.1-1.1_powerpc.deb) ... Selecting previously deselected package libxcb-xlib0. Unpacking libxcb-xlib0 (from .../libxcb-xlib0_1.1-1.1_powerpc.deb) ... Selecting previously deselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.1.5-2ubuntu2_all.deb) ... Selecting previously deselected package libx11-6. Unpacking libx11-6 (from .../libx11-6_2%3a1.1.5-2ubuntu2_powerpc.deb) ... Setting up x11-common (7.4~5ubuntu9) ... Selecting previously deselected package libxt6. (Reading database ... 10450 files and directories currently installed.) Unpacking libxt6 (from .../libxt6_1%3a1.0.5-3_powerpc.deb) ... Selecting previously deselected package xutils-dev. Unpacking xutils-dev (from .../xutils-dev_1%3a7.4+4_powerpc.deb) ... Selecting previously deselected package libssl0.9.8. Unpacking libssl0.9.8 (from .../libssl0.9.8_0.9.8g-14ubuntu1_powerpc.deb) ... Selecting previously deselected package openssl. Unpacking openssl (from .../openssl_0.9.8g-14ubuntu1_powerpc.deb) ... Selecting previously deselected package ca-certificates. Unpacking ca-certificates (from .../ca-certificates_20080809_all.deb) ... Selecting previously deselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_4.26-2_powerpc.deb) ... Selecting previously deselected package file. Unpacking file (from .../file_4.26-2_powerpc.deb) ... Selecting previously deselected package libgpg-error0. Unpacking libgpg-error0 (from .../libgpg-error0_1.4-2ubuntu7_powerpc.deb) ... Selecting previously deselected package libgcrypt11. Unpacking libgcrypt11 (from .../libgcrypt11_1.4.1-2ubuntu1_powerpc.deb) ... Selecting previously deselected package libtasn1-3. Unpacking libtasn1-3 (from .../libtasn1-3_1.5-1_powerpc.deb) ... Selecting previously deselected package libgnutls26. Unpacking libgnutls26 (from .../libgnutls26_2.4.2-4_powerpc.deb) ... Selecting previously deselected package libidn11. Unpacking libidn11 (from .../libidn11_1.10-3_powerpc.deb) ... Selecting previously deselected package libkeyutils1. Unpacking libkeyutils1 (from .../libkeyutils1_1.2-9_powerpc.deb) ... Selecting previously deselected package libkrb53. Unpacking libkrb53 (from .../libkrb53_1.6.dfsg.4~beta1-4_powerpc.deb) ... Selecting previously deselected package libsasl2-modules. Unpacking libsasl2-modules (from .../libsasl2-modules_2.1.22.dfsg1-23ubuntu2_powerpc.deb) ... Selecting previously deselected package libsasl2-2. Unpacking libsasl2-2 (from .../libsasl2-2_2.1.22.dfsg1-23ubuntu2_powerpc.deb) ... Selecting previously deselected package libldap-2.4-2. Unpacking libldap-2.4-2 (from .../libldap-2.4-2_2.4.11-0ubuntu7_powerpc.deb) ... Selecting previously deselected package libcurl3-gnutls. Unpacking libcurl3-gnutls (from .../libcurl3-gnutls_7.18.2-7ubuntu2_powerpc.deb) ... Selecting previously deselected package libncursesw5. Unpacking libncursesw5 (from .../libncursesw5_5.7-2ubuntu1_powerpc.deb) ... Selecting previously deselected package libnewt0.52. Unpacking libnewt0.52 (from .../libnewt0.52_0.52.2-11.3ubuntu1_powerpc.deb) ... Selecting previously deselected package libpopt0. Unpacking libpopt0 (from .../libpopt0_1.14-4_powerpc.deb) ... Selecting previously deselected package readline-common. 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Updating certificates in /etc/ssl/certs....done. Running hooks in /etc/ca-certificates/update.d....done. Setting up libmagic1 (4.26-2) ... Setting up file (4.26-2) ... Setting up libgpg-error0 (1.4-2ubuntu7) ... Setting up libgcrypt11 (1.4.1-2ubuntu1) ... Setting up libtasn1-3 (1.5-1) ... Setting up libgnutls26 (2.4.2-4) ... Setting up libidn11 (1.10-3) ... Setting up libkeyutils1 (1.2-9) ... Setting up libkrb53 (1.6.dfsg.4~beta1-4) ... Setting up libncursesw5 (5.7-2ubuntu1) ... Setting up libnewt0.52 (0.52.2-11.3ubuntu1) ... Setting up libpopt0 (1.14-4) ... Setting up readline-common (5.2-3build1) ... Setting up libreadline5 (5.2-3build1) ... Setting up libsqlite3-0 (3.5.9-6) ... Setting up mime-support (3.44-1) ... Setting up netbase (4.34ubuntu1) ... Setting up libdb4.2 (4.2.52+dfsg-5) ... Setting up python2.5 (2.5.3-0ubuntu1) ... Setting up python (2.5.2-3ubuntu1) ... Setting up whiptail (0.52.2-11.3ubuntu1) ... Setting up bsdmainutils (6.1.10ubuntu3) ... Setting up ed (0.7-3ubuntu1) ... Setting up gettext-base (0.17-6ubuntu1) ... Setting up groff-base (1.18.1.1-21) ... Setting up libexpat1 (2.0.1-4) ... Setting up libhtml-tagset-perl (3.20-2) ... Setting up liburi-perl (1.37+dfsg-1ubuntu1) ... Setting up libhtml-parser-perl (3.59-1ubuntu1) ... Setting up libhtml-tree-perl (3.23-1) ... Setting up libwww-perl (5.820-1) ... Setting up libxext6 (1.0.4-1) ... Setting up libxml-parser-perl (2.36-1.1build2) ... Setting up libxml2 (2.6.32.dfsg-5ubuntu1) ... Setting up man-db (2.5.3-1) ... Building database of manual pages ... ... skipping, since this is a buildd Setting up python-central (0.6.7ubuntu1) ... Setting up m4 (1.4.11-1) ... Setting up autoconf (2.61-7ubuntu1) ... Setting up autotools-dev (20080123.2) ... Setting up automake (1.10.1-3) ... Setting up html2text (1.3.2a-5) ... Setting up libglib2.0-0 (2.19.3-0ubuntu1) ... Setting up libcroco3 (0.6.1-2) ... Setting up gettext (0.17-6ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.15ubuntu1) ... Setting up debhelper (7.0.17ubuntu1) ... Setting up fdupes (1.50-PR2-1) ... Setting up intltool (0.40.5-1) ... Setting up cdbs (0.4.52ubuntu9) ... Setting up defoma (0.11.10-0.2ubuntu1) ... Setting up diffstat (1.46-1) ... Setting up libpng12-0 (1.2.27-2ubuntu1) ... Setting up doxygen (1.5.7.1-0ubuntu2) ... Setting up libfreetype6 (2.3.7-2ubuntu1) ... Setting up ttf-dejavu-core (2.25-3) ... Setting up ttf-dejavu-extra (2.25-3) ... Setting up ttf-dejavu (2.25-3) ... Setting up fontconfig-config (2.6.0-1ubuntu4) ... Setting up libfontconfig1 (2.6.0-1ubuntu4) ... Setting up fontconfig (2.6.0-1ubuntu4) ... Updating font configuration of fontconfig... Cleaning up category cid.. Cleaning up category truetype.. Cleaning up category type1.. Updating category type1.. Updating category truetype.. Updating category cid.. Updating fontconfig cache for /usr/share/fonts/truetype/ttf-dejavu Cleaning up old fontconfig caches... done. Regenerating fonts cache... done. Setting up libgfortran3 (4.3.2-2ubuntu9) ... Setting up gfortran-4.3 (4.3.2-2ubuntu9) ... Setting up gfortran (4.3.2-2ubuntu1) ... Setting up libcups2 (1.3.9-11) ... Setting up libjpeg62 (6b-14) ... Setting up libtiff4 (3.8.2-11) ... Setting up libcupsimage2 (1.3.9-11) ... Setting up libpaper1 (1.1.23+nmu1) ... Creating config file /etc/papersize with new version Setting up libgs8 (8.63.dfsg.1-0ubuntu13) ... Setting up gsfonts (8.11+urwcyr1.0.7~pre44-3) ... (Re-)registering PostScript fonts... Updating fontconfig cache for /usr/share/fonts/type1/gsfonts done. Setting up ghostscript (8.63.dfsg.1-0ubuntu13) ... Updating font configuration of gs... Cleaning up category psprint.. Cleaning up category cmap.. Cleaning up category cid.. Cleaning up category truetype.. Cleaning up category gsfontderivative.. Cleaning up category type3.. Cleaning up category type1.. Updating category type1.. Updating category type3.. Updating category gsfontderivative.. Updating category truetype.. Updating category cid.. Updating category cmap.. Updating category psprint.. Setting up libgd2-noxpm (2.0.36~rc1~dfsg-3ubuntu1) ... Setting up libsysfs2 (2.1.0-5) ... Setting up libts-0.0-0 (1.0-4ubuntu2) ... Setting up libdirectfb-1.0-0 (1.0.1-11ubuntu1) ... Setting up libpixman-1-0 (0.13.2-0ubuntu1) ... Setting up libxcb-render0 (1.1-1.1) ... Setting up libxcb-render-util0 (0.2.1+git1-1) ... Setting up libxrender1 (0.9.4-2) ... Setting up libcairo2 (1.8.4-1ubuntu1) ... Setting up libltdl7 (2.2.4-0ubuntu5) ... Setting up libpango1.0-common (1.22.3-1) ... I: Purging /etc/pango/pango.modules Cleaning up font configuration of pango... Updating font configuration of pango... Cleaning up category xfont.. Updating category xfont.. *** You don't have any defomized font packages. *** So we are trying to force to generate pangox.aliases... Setting up libdatrie0 (0.1.3-2) ... Setting up libthai-data (0.1.9-4) ... Setting up libthai0 (0.1.9-4) ... Setting up libxft2 (2.1.13-2) ... Setting up libpango1.0-0 (1.22.3-1) ... Setting up libgraphviz4 (2.20.2-3ubuntu1) ... Setting up libxmu6 (1.0.4-1) ... Setting up libxpm4 (3.5.7-1) ... Setting up libxaw7 (1.0.4-2) ... Setting up graphviz (2.20.2-3ubuntu1) ... Setting up libatlas3gf-base (3.6.0-22ubuntu1) ... Setting up libblas3gf (1.2-2) ... Setting up libblas-dev (1.2-2) ... Setting up libatlas-headers (3.6.0-22ubuntu1) ... Setting up libatlas-base-dev (3.6.0-22ubuntu1) ... Setting up libfftw3-3 (3.1.2-3.1ubuntu1) ... Setting up libfftw3-dev (3.1.2-3.1ubuntu1) ... Setting up libglpk0 (4.29-2) ... Setting up libhdf5-serial-1.6.6-0 (1.6.6-4ubuntu1) ... Setting up libjpeg62-dev (6b-14) ... Setting up zlib1g-dev (1.2.3.3.dfsg-12ubuntu1) ... Setting up libhdf5-serial-dev (1.6.6-4ubuntu1) ... Setting up libkpathsea4 (2007.dfsg.2-4) ... Setting up liblapack3gf (3.1.1-6) ... Setting up liblapack-dev (3.1.1-6) ... Setting up libncurses5-dev (5.7-2ubuntu1) ... Setting up libpaper-utils (1.1.23+nmu1) ... Setting up libpoppler3 (0.8.7-1) ... Setting up libqhull5 (2003.1-11) ... Setting up libreadline5-dev (5.2-3build1) ... Setting up libsuitesparse-3.1.0 (3.1.0-3.1) ... Setting up libxss1 (1.1.3-1) ... Setting up texinfo (4.11.dfsg.1-4) ... Running mktexlsr. This may take some time. ... done. Setting up python2.4-minimal (2.4.6-1ubuntu1) ... Setting up python2.4 (2.4.6-1ubuntu1) ... Setting up python-all (2.5.2-3ubuntu1) ... Setting up python2.5-dev (2.5.3-0ubuntu1) ... Setting up python-dev (2.5.2-3ubuntu1) ... Setting up python2.4-dev (2.4.6-1ubuntu1) ... Setting up python-all-dev (2.5.2-3ubuntu1) ... Setting up python-numpy (1.1.1-2ubuntu1) ... Setting up quilt (0.46-6) ... Setting up zip (2.32-1) ... Setting up unzip (5.52-12ubuntu1) ... Setting up tcl8.5 (8.5.3-2) ... Setting up tk8.5 (8.5.3-4) ... Setting up r-base-core (2.8.1~20081219-1) ... Setting R_PAPERSIZE_USER default to 'a4' Creating config file /etc/R/Renviron with new version warning: Configuration file texmf.cnf not found! Searched these directories: /usr/share/texmf/web2c:/usr/share/texmf-texlive/web2c:/usr/local/share/texmf/web2c Trying to proceed... Setting up swig (1.3.36-1ubuntu1) ... Setting up tex-common (1.11.3) ... Creating config file /etc/texmf/texmf.d/05TeXMF.cnf with new version Creating config file /etc/texmf/texmf.d/15Plain.cnf with new version Creating config file /etc/texmf/texmf.d/45TeXinputs.cnf with new version Creating config file /etc/texmf/texmf.d/55Fonts.cnf with new version Creating config file /etc/texmf/texmf.d/65BibTeX.cnf with new version Creating config file /etc/texmf/texmf.d/75DviPS.cnf with new version Creating config file /etc/texmf/texmf.d/85Misc.cnf with new version Creating config file /etc/texmf/texmf.d/90TeXDoc.cnf with new version Creating config file /etc/texmf/texmf.d/95NonPath.cnf with new version Creating config file /etc/texmf/updmap.d/00updmap.cfg with new version Creating config file /etc/texmf/texmf.cnf with new version Setting up texlive-common (2007.dfsg.1-4) ... Setting up texlive-doc-base (2007.dfsg.1-1) ... Running mktexlsr. This may take some time... done. Setting up texlive-base-bin (2007.dfsg.2-4) ... Running mktexlsr. This may take some time... done. Building format(s) --all. This may take some time... done. Setting up texlive-base (2007.dfsg.1-4) ... Running mktexlsr. This may take some time... done. Building format(s) --all. This may take some time... done. Running updmap-sys. This may take some time... done. Setting up texlive-latex-base (2007.dfsg.1-4) ... Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf. This may take some time... done. Setting up libsasl2-modules (2.1.22.dfsg1-23ubuntu2) ... Setting up libsasl2-2 (2.1.22.dfsg1-23ubuntu2) ... Setting up libldap-2.4-2 (2.4.11-0ubuntu7) ... Setting up libcurl3-gnutls (7.18.2-7ubuntu2) ... Setting up octave3.0 (3.0.1-6ubuntu1) ... Setting up octave3.0-headers (3.0.1-6ubuntu1) ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.9-0ubuntu5 make_3.81-5 dpkg-dev_1.14.22ubuntu1 g++-4.3_4.3.2-2ubuntu9 gcc-4.3_4.3.2-2ubuntu9 binutils_2.19-0ubuntu3 libstdc++6_4.3.2-2ubuntu9 libstdc++6-4.3-dev_4.3.2-2ubuntu9 ------------------------------------------------------------------------------ dpkg-source: extracting shogun in shogun-0.6.7 dpkg-source: unpacking shogun_0.6.7.orig.tar.gz dpkg-source: applying /srv/home/buildd/build-820429-1912710/shogun_0.6.7-1ubuntu1.diff.gz dpkg-buildpackage: set CFLAGS to default value: -g -O2 dpkg-buildpackage: set CPPFLAGS to default value: dpkg-buildpackage: set LDFLAGS to default value: -Wl,-Bsymbolic-functions dpkg-buildpackage: set FFLAGS to default value: -g -O2 dpkg-buildpackage: set CXXFLAGS to default value: -g -O2 dpkg-buildpackage: source package shogun dpkg-buildpackage: source version 0.6.7-1ubuntu1 dpkg-buildpackage: host architecture powerpc /usr/bin/fakeroot debian/rules clean test -x debian/rules dh_testroot dh_clean /usr/bin/make -f debian/rules reverse-config make[1]: Entering directory `/build/buildd/shogun-0.6.7' make[1]: Nothing to be done for `reverse-config'. make[1]: Leaving directory `/build/buildd/shogun-0.6.7' if [ -d "." ]; then \ cd . && QUILT_PATCHES=/build/buildd/shogun-0.6.7/debian/patches quilt --quiltrc /dev/null pop -a -R || test $? = 2 ; \ fi No patch removed rm -rf ./.pc rm -f debian/stamp-patch* rm -f -r build-* debian/stamp-* find debian -mindepth 2 -name 'shogun-*' -delete debian/rules build test -x debian/rules mkdir -p "." touch debian/stamp-nonfree /usr/bin/make -f debian/rules reverse-config make[1]: Entering directory `/build/buildd/shogun-0.6.7' make[1]: Nothing to be done for `reverse-config'. make[1]: Leaving directory `/build/buildd/shogun-0.6.7' cd . && QUILT_PATCHES=/build/buildd/shogun-0.6.7/debian/patches quilt --quiltrc /dev/null push -a || test $? = 2 Applying patch wordsize.patch patching file src/configure Now at patch wordsize.patch touch debian/stamp-patched /usr/bin/make -f debian/rules update-config make[1]: Entering directory `/build/buildd/shogun-0.6.7' make[1]: Nothing to be done for `update-config'. make[1]: Leaving directory `/build/buildd/shogun-0.6.7' set -x; cp -a src build-python-modular2.4; cd build-python-modular2.4; ./configure --disable-cpudetection --prefix=/usr --python=python2.4 --interface=python-modular; cd ..; cp -a src build-python-modular2.5; cd build-python-modular2.5; ./configure --disable-cpudetection --prefix=/usr --python=python2.5 --interface=python-modular; cd ..; + cp -a src build-python-modular2.4 + cd build-python-modular2.4 + ./configure --disable-cpudetection --prefix=/usr --python=python2.4 --interface=python-modular Running configure for SHOGUN version 0.6.7 Enabling modular python interface Detected Operating System: Linux Detected Host Architecture: ppc Checking for C Compiler ... 4.3.3, ok Checking for C Compiler flags ... -g -O2 -g -Wall -O2 Checking for C++ Compiler ... 4.3.3, ok Checking for C++ Compiler flags ... -g -O2 -g -Wall -O2 Checking for makedepend ... gcc -MM Checking for Python ... 2.4.6 Checking for GNU Make ... GNU Make 3.81 Checking for Doxygen ... 1.5.7.1 Checking for CPU type ... PPC970FX altivec Checking for GCC & CPU optimization abilities ... none Checking for Word Size ... 32 bit Checking for Math support (-lm) ... yes Checking for Math powl() support ... yes Checking for Math sqrtl() support ... yes Checking for Math log2() support ... yes Checking for Posix threads support ... yes Checking for Mindy support ... no - never mind Checking for AMD ACML support ... no Checking for Intel MKL support ... no Checking for Atlas support ... yes Checking for Python numpy support ... 1.1.1 Checking for Python/Python Numpy Developer Files ... yes Checking for CPLEX support ... no Checking for GLPK ... no Checking for lpsolve Developer Files ... no Checking for SWIG ... 1.3.36 SHOGUN was configured for python-modular interface with the following configure options --disable-cpudetection --prefix=/usr --python=python2.4 --interface=python-modular type "make" now to compile + cd .. + cp -a src build-python-modular2.5 + cd build-python-modular2.5 + ./configure --disable-cpudetection --prefix=/usr --python=python2.5 --interface=python-modular Running configure for SHOGUN version 0.6.7 Enabling modular python interface Detected Operating System: Linux Detected Host Architecture: ppc Checking for C Compiler ... 4.3.3, ok Checking for C Compiler flags ... -g -O2 -g -Wall -O2 Checking for C++ Compiler ... 4.3.3, ok Checking for C++ Compiler flags ... -g -O2 -g -Wall -O2 Checking for makedepend ... gcc -MM Checking for Python ... 2.5.3 Checking for GNU Make ... GNU Make 3.81 Checking for Doxygen ... 1.5.7.1 Checking for CPU type ... PPC970FX altivec Checking for GCC & CPU optimization abilities ... none Checking for Word Size ... 32 bit Checking for Math support (-lm) ... yes Checking for Math powl() support ... yes Checking for Math sqrtl() support ... yes Checking for Math log2() support ... yes Checking for Posix threads support ... yes Checking for Mindy support ... no - never mind Checking for AMD ACML support ... no Checking for Intel MKL support ... no Checking for Atlas support ... yes Checking for Python numpy support ... 1.1.1 Checking for Python/Python Numpy Developer Files ... yes Checking for CPLEX support ... no Checking for GLPK ... no Checking for lpsolve Developer Files ... no Checking for SWIG ... 1.3.36 SHOGUN was configured for python-modular interface with the following configure options --disable-cpudetection --prefix=/usr --python=python2.5 --interface=python-modular type "make" now to compile + cd .. touch debian/stamp-configure-python-modular set -x; cp -a src build-python2.4; cd build-python2.4; ./configure --disable-cpudetection --prefix=/usr --python=python2.4 --interface=python; cd ..; cp -a src build-python2.5; cd build-python2.5; ./configure --disable-cpudetection --prefix=/usr --python=python2.5 --interface=python; cd ..; + cp -a src build-python2.4 + cd build-python2.4 + ./configure --disable-cpudetection --prefix=/usr --python=python2.4 --interface=python Running configure for SHOGUN version 0.6.7 Enabling python interface Detected Operating System: Linux Detected Host Architecture: ppc Checking for C Compiler ... 4.3.3, ok Checking for C Compiler flags ... -g -O2 -g -Wall -O2 Checking for C++ Compiler ... 4.3.3, ok Checking for C++ Compiler flags ... -g -O2 -g -Wall -O2 Checking for makedepend ... gcc -MM Checking for Python ... 2.4.6 Checking for GNU Make ... GNU Make 3.81 Checking for Doxygen ... 1.5.7.1 Checking for CPU type ... PPC970FX altivec Checking for GCC & CPU optimization abilities ... none Checking for Word Size ... 32 bit Checking for Math support (-lm) ... yes Checking for Math powl() support ... yes Checking for Math sqrtl() support ... yes Checking for Math log2() support ... yes Checking for Posix threads support ... yes Checking for Mindy support ... no - never mind Checking for AMD ACML support ... no Checking for Intel MKL support ... no Checking for Atlas support ... yes Checking for Python numpy support ... 1.1.1 Checking for Python/Python Numpy Developer Files ... yes Checking for CPLEX support ... no Checking for GLPK ... no Checking for lpsolve Developer Files ... no SHOGUN was configured for python interface with the following configure options --disable-cpudetection --prefix=/usr --python=python2.4 --interface=python type "make" now to compile + cd .. + cp -a src build-python2.5 + cd build-python2.5 + ./configure --disable-cpudetection --prefix=/usr --python=python2.5 --interface=python Running configure for SHOGUN version 0.6.7 Enabling python interface Detected Operating System: Linux Detected Host Architecture: ppc Checking for C Compiler ... 4.3.3, ok Checking for C Compiler flags ... -g -O2 -g -Wall -O2 Checking for C++ Compiler ... 4.3.3, ok Checking for C++ Compiler flags ... -g -O2 -g -Wall -O2 Checking for makedepend ... gcc -MM Checking for Python ... 2.5.3 Checking for GNU Make ... GNU Make 3.81 Checking for Doxygen ... 1.5.7.1 Checking for CPU type ... PPC970FX altivec Checking for GCC & CPU optimization abilities ... none Checking for Word Size ... 32 bit Checking for Math support (-lm) ... yes Checking for Math powl() support ... yes Checking for Math sqrtl() support ... yes Checking for Math log2() support ... yes Checking for Posix threads support ... yes Checking for Mindy support ... no - never mind Checking for AMD ACML support ... no Checking for Intel MKL support ... no Checking for Atlas support ... yes Checking for Python numpy support ... 1.1.1 Checking for Python/Python Numpy Developer Files ... yes Checking for CPLEX support ... no Checking for GLPK ... no Checking for lpsolve Developer Files ... no SHOGUN was configured for python interface with the following configure options --disable-cpudetection --prefix=/usr --python=python2.5 --interface=python type "make" now to compile + cd .. touch debian/stamp-configure-python cp -a src build-readline cd build-readline && ./configure --disable-cpudetection \ --prefix=/usr --interface=cmdline Running configure for SHOGUN version 0.6.7 Enabling cmdline interface Detected Operating System: Linux Detected Host Architecture: ppc Checking for C Compiler ... 4.3.3, ok Checking for C Compiler flags ... -g -O2 -g -Wall -O2 Checking for C++ Compiler ... 4.3.3, ok Checking for C++ Compiler flags ... -g -O2 -g -Wall -O2 Checking for makedepend ... gcc -MM Checking for Python ... 2.5.3 Checking for GNU Make ... GNU Make 3.81 Checking for Doxygen ... 1.5.7.1 Checking for CPU type ... PPC970FX altivec Checking for GCC & CPU optimization abilities ... none Checking for Word Size ... 32 bit Checking for Math support (-lm) ... yes Checking for Math powl() support ... yes Checking for Math sqrtl() support ... yes Checking for Math log2() support ... yes Checking for Posix threads support ... yes Checking for Readline support ... yes Checking for Mindy support ... no - never mind Checking for AMD ACML support ... no Checking for Intel MKL support ... no Checking for Atlas support ... yes Checking for CPLEX support ... no Checking for GLPK ... no Checking for lpsolve Developer Files ... no SHOGUN was configured for cmdline interface with the following configure options --disable-cpudetection --prefix=/usr --interface=cmdline type "make" now to compile touch debian/stamp-configure-readline # reintroduce tests; failing autobuilders are fun ... ls -l /usr/bin/oct* lrwxrwxrwx 1 root root 24 Dec 23 14:13 /usr/bin/octave -> /etc/alternatives/octave -rwxr-xr-x 1 root root 13668 Aug 13 09:24 /usr/bin/octave-3.0.1 lrwxrwxrwx 1 root root 28 Dec 23 14:13 /usr/bin/octave-bug -> /etc/alternatives/octave-bug -rwxr-xr-x 1 root root 14247 Aug 13 09:19 /usr/bin/octave-bug-3.0.1 lrwxrwxrwx 1 root root 31 Dec 23 14:13 /usr/bin/octave-config -> /etc/alternatives/octave-config -rwxr-xr-x 1 root root 6254 Aug 13 09:19 /usr/bin/octave-config-3.0.1 lrwxrwxrwx 1 root root 32 Dec 23 14:13 /usr/bin/octave-depends -> /etc/alternatives/octave-depends -rwxr-xr-x 1 root root 2221 Aug 13 09:23 /usr/bin/octave-depends-3.0.1 lrwxrwxrwx 1 root root 12 Dec 23 14:12 /usr/bin/octave3.0 -> octave-3.0.1 lrwxrwxrwx 1 root root 20 Dec 23 14:12 /usr/bin/octave3.0-depends -> octave-depends-3.0.1 ls -l /etc/alternatives/oct* lrwxrwxrwx 1 root root 21 Dec 23 14:13 /etc/alternatives/octave -> /usr/bin/octave-3.0.1 lrwxrwxrwx 1 root root 25 Dec 23 14:13 /etc/alternatives/octave-bug -> /usr/bin/octave-bug-3.0.1 lrwxrwxrwx 1 root root 41 Dec 23 14:13 /etc/alternatives/octave-bug.1.gz -> /usr/share/man/man1/octave-bug-3.0.1.1.gz lrwxrwxrwx 1 root root 28 Dec 23 14:13 /etc/alternatives/octave-config -> /usr/bin/octave-config-3.0.1 lrwxrwxrwx 1 root root 44 Dec 23 14:13 /etc/alternatives/octave-config.1.gz -> /usr/share/man/man1/octave-config-3.0.1.1.gz lrwxrwxrwx 1 root root 40 Dec 23 14:13 /etc/alternatives/octave-defs.make -> /usr/share/octave/debian/defs.make-3.0.1 lrwxrwxrwx 1 root root 29 Dec 23 14:13 /etc/alternatives/octave-depends -> /usr/bin/octave-depends-3.0.1 lrwxrwxrwx 1 root root 45 Dec 23 14:13 /etc/alternatives/octave-depends.1.gz -> /usr/share/man/man1/octave-depends-3.0.1.1.gz lrwxrwxrwx 1 root root 32 Dec 23 14:13 /etc/alternatives/octave-include -> /usr/include/octave-3.0.1/octave lrwxrwxrwx 1 root root 37 Dec 23 14:13 /etc/alternatives/octave.1.gz -> /usr/share/man/man1/octave-3.0.1.1.gz cp -a src build-octave-modular cd build-octave-modular && ./configure --disable-cpudetection \ --prefix=/usr --interface=octave-modular Running configure for SHOGUN version 0.6.7 Enabling modular Octave interface Detected Operating System: Linux Detected Host Architecture: ppc Checking for C Compiler ... 4.3.3, ok Checking for C Compiler flags ... -g -O2 -g -Wall -O2 Checking for C++ Compiler ... 4.3.3, ok Checking for C++ Compiler flags ... -g -O2 -g -Wall -O2 Checking for makedepend ... gcc -MM Checking for Python ... 2.5.3 Checking for GNU Make ... GNU Make 3.81 Checking for Doxygen ... 1.5.7.1 Checking for CPU type ... PPC970FX altivec Checking for GCC & CPU optimization abilities ... none Checking for Word Size ... 32 bit Checking for Math support (-lm) ... yes Checking for Math powl() support ... yes Checking for Math sqrtl() support ... yes Checking for Math log2() support ... yes Checking for Posix threads support ... yes Checking for Mindy support ... no - never mind Checking for AMD ACML support ... no Checking for Intel MKL support ... no Checking for Atlas support ... yes Checking for Octave ... 3.0.1 Checking for octave-config ... yes Checking for Octave Developer Files ... yes Checking for CPLEX support ... no Checking for GLPK ... no Checking for lpsolve Developer Files ... no Checking for SWIG ... 1.3.36 SHOGUN was configured for octave-modular interface with the following configure options --disable-cpudetection --prefix=/usr --interface=octave-modular type "make" now to compile touch debian/stamp-configure-octave-modular # reintroduce tests; failing autobuilders are fun ... ls -l /usr/bin/oct* lrwxrwxrwx 1 root root 24 Dec 23 14:13 /usr/bin/octave -> /etc/alternatives/octave -rwxr-xr-x 1 root root 13668 Aug 13 09:24 /usr/bin/octave-3.0.1 lrwxrwxrwx 1 root root 28 Dec 23 14:13 /usr/bin/octave-bug -> /etc/alternatives/octave-bug -rwxr-xr-x 1 root root 14247 Aug 13 09:19 /usr/bin/octave-bug-3.0.1 lrwxrwxrwx 1 root root 31 Dec 23 14:13 /usr/bin/octave-config -> /etc/alternatives/octave-config -rwxr-xr-x 1 root root 6254 Aug 13 09:19 /usr/bin/octave-config-3.0.1 lrwxrwxrwx 1 root root 32 Dec 23 14:13 /usr/bin/octave-depends -> /etc/alternatives/octave-depends -rwxr-xr-x 1 root root 2221 Aug 13 09:23 /usr/bin/octave-depends-3.0.1 lrwxrwxrwx 1 root root 12 Dec 23 14:12 /usr/bin/octave3.0 -> octave-3.0.1 lrwxrwxrwx 1 root root 20 Dec 23 14:12 /usr/bin/octave3.0-depends -> octave-depends-3.0.1 ls -l /etc/alternatives/oct* lrwxrwxrwx 1 root root 21 Dec 23 14:13 /etc/alternatives/octave -> /usr/bin/octave-3.0.1 lrwxrwxrwx 1 root root 25 Dec 23 14:13 /etc/alternatives/octave-bug -> /usr/bin/octave-bug-3.0.1 lrwxrwxrwx 1 root root 41 Dec 23 14:13 /etc/alternatives/octave-bug.1.gz -> /usr/share/man/man1/octave-bug-3.0.1.1.gz lrwxrwxrwx 1 root root 28 Dec 23 14:13 /etc/alternatives/octave-config -> /usr/bin/octave-config-3.0.1 lrwxrwxrwx 1 root root 44 Dec 23 14:13 /etc/alternatives/octave-config.1.gz -> /usr/share/man/man1/octave-config-3.0.1.1.gz lrwxrwxrwx 1 root root 40 Dec 23 14:13 /etc/alternatives/octave-defs.make -> /usr/share/octave/debian/defs.make-3.0.1 lrwxrwxrwx 1 root root 29 Dec 23 14:13 /etc/alternatives/octave-depends -> /usr/bin/octave-depends-3.0.1 lrwxrwxrwx 1 root root 45 Dec 23 14:13 /etc/alternatives/octave-depends.1.gz -> /usr/share/man/man1/octave-depends-3.0.1.1.gz lrwxrwxrwx 1 root root 32 Dec 23 14:13 /etc/alternatives/octave-include -> /usr/include/octave-3.0.1/octave lrwxrwxrwx 1 root root 37 Dec 23 14:13 /etc/alternatives/octave.1.gz -> /usr/share/man/man1/octave-3.0.1.1.gz cp -a src build-octave cd build-octave && ./configure --disable-cpudetection \ --prefix=/usr --interface=octave Running configure for SHOGUN version 0.6.7 Enabling Octave interface Detected Operating System: Linux Detected Host Architecture: ppc Checking for C Compiler ... 4.3.3, ok Checking for C Compiler flags ... -g -O2 -g -Wall -O2 Checking for C++ Compiler ... 4.3.3, ok Checking for C++ Compiler flags ... -g -O2 -g -Wall -O2 Checking for makedepend ... gcc -MM Checking for Python ... 2.5.3 Checking for GNU Make ... GNU Make 3.81 Checking for Doxygen ... 1.5.7.1 Checking for CPU type ... PPC970FX altivec Checking for GCC & CPU optimization abilities ... none Checking for Word Size ... 32 bit Checking for Math support (-lm) ... yes Checking for Math powl() support ... yes Checking for Math sqrtl() support ... yes Checking for Math log2() support ... yes Checking for Posix threads support ... yes Checking for Mindy support ... no - never mind Checking for AMD ACML support ... no Checking for Intel MKL support ... no Checking for Atlas support ... yes Checking for Octave ... 3.0.1 Checking for octave-config ... yes Checking for Octave Developer Files ... yes Checking for CPLEX support ... no Checking for GLPK ... no Checking for lpsolve Developer Files ... no SHOGUN was configured for octave interface with the following configure options --disable-cpudetection --prefix=/usr --interface=octave type "make" now to compile touch debian/stamp-configure-octave cp -a src build-r cd build-r && ./configure --disable-cpudetection \ --prefix=/usr --interface=r Running configure for SHOGUN version 0.6.7 Enabling R interface Detected Operating System: Linux Detected Host Architecture: ppc Checking for C Compiler ... 4.3.3, ok Checking for C Compiler flags ... -g -O2 -g -Wall -O2 Checking for C++ Compiler ... 4.3.3, ok Checking for C++ Compiler flags ... -g -O2 -g -Wall -O2 Checking for makedepend ... gcc -MM Checking for Python ... 2.5.3 Checking for GNU Make ... GNU Make 3.81 Checking for Doxygen ... 1.5.7.1 Checking for CPU type ... PPC970FX altivec Checking for GCC & CPU optimization abilities ... none Checking for Word Size ... 32 bit Checking for Math support (-lm) ... yes Checking for Math powl() support ... yes Checking for Math sqrtl() support ... yes Checking for Math log2() support ... yes Checking for Posix threads support ... yes Checking for Mindy support ... no - never mind Checking for AMD ACML support ... no Checking for Intel MKL support ... no Checking for Atlas support ... yes Checking for R ... 2.8.1 Checking for R Developer Files ... yes Checking for CPLEX support ... no Checking for GLPK ... no Checking for lpsolve Developer Files ... no SHOGUN was configured for r interface with the following configure options --disable-cpudetection --prefix=/usr --interface=r type "make" now to compile touch debian/stamp-configure-r set -x; /usr/bin/make -C build-python-modular2.4; /usr/bin/make -C build-python-modular2.5; + /usr/bin/make -C build-python-modular2.4 make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python-modular2.4' ================================= ==== Generating dependencies ==== ================================= find . -mindepth 2 -name "*.c" -o -name "*.cpp" \ -exec gcc -MM -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. {} -MT {}.o \; >.depend find . -mindepth 2 -name "*.i" -o \ -name "*.h" -o -name "*.cpp" -o -name "*.cpp" | \ cut -c 3- | \ python2.4 .generate_link_dependencies.py "_" "so" >>.depend test -f .depend && make make[2]: Entering directory `/build/buildd/shogun-0.6.7/build-python-modular2.4' ======================================================================================== ==== Building shogun for platform Linux-ppc target swig ==== opts: -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread ======================================================================================== c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/File.cpp.o lib/File.cpp lib/File.cpp: In member function 'bool CFile::write_char_valued_strings(const T_STRING*, int32_t)': lib/File.cpp:646: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/memory.cpp.o lib/memory.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/lapack.cpp.o lib/lapack.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/Cplex.cpp.o lib/Cplex.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/Mathematics.cpp.o lib/Mathematics.cpp lib/Mathematics.cpp: In static member function 'static int32_t CMath::calcroc(float64_t*, float64_t*, float64_t*, int32_t*, int32_t&, int32_t&, int32_t&, float64_t&, FILE*)': lib/Mathematics.cpp:345: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:346: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:347: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/Time.cpp.o lib/Time.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/io.cpp.o lib/io.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from lib/io.cpp:16: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/Trie.cpp.o lib/Trie.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/Signal.cpp.o lib/Signal.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from lib/Signal.cpp:14: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/ShogunException.cpp.o lib/ShogunException.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from lib/ShogunException.cpp:2: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o base/Version.cpp.o base/Version.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o base/SGObject.cpp.o base/SGObject.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o base/Parallel.cpp.o base/Parallel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o clustering/Hierarchical.cpp.o clustering/Hierarchical.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o clustering/KMeans.cpp.o clustering/KMeans.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o regression/svr/LibSVR.cpp.o regression/svr/LibSVR.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o regression/KRR.cpp.o regression/KRR.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o evaluation/PerformanceMeasures.cpp.o evaluation/PerformanceMeasures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o structure/Plif.cpp.o structure/Plif.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o structure/DynProg.cpp.o structure/DynProg.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o structure/PlifArray.cpp.o structure/PlifArray.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/BrayCurtisDistance.cpp.o distance/BrayCurtisDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/EuclidianDistance.cpp.o distance/EuclidianDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/CanberraMetric.cpp.o distance/CanberraMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/ChebyshewMetric.cpp.o distance/ChebyshewMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/JensenMetric.cpp.o distance/JensenMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/GeodesicMetric.cpp.o distance/GeodesicMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/CanberraWordDistance.cpp.o distance/CanberraWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/ManhattanMetric.cpp.o distance/ManhattanMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/SparseEuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/ChiSquareDistance.cpp.o distance/ChiSquareDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/TanimotoDistance.cpp.o distance/TanimotoDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/HammingWordDistance.cpp.o distance/HammingWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/MinkowskiMetric.cpp.o distance/MinkowskiMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/ManhattanWordDistance.cpp.o distance/ManhattanWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/Distance.cpp.o distance/Distance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/CosineDistance.cpp.o distance/CosineDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/DistanceMachine.cpp.o distance/DistanceMachine.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIPreProc.cpp.o guilib/GUIPreProc.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIHMM.cpp.o guilib/GUIHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIFeatures.cpp.o guilib/GUIFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIMath.cpp.o guilib/GUIMath.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIStructure.cpp.o guilib/GUIStructure.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIPluginEstimate.cpp.o guilib/GUIPluginEstimate.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIKernel.cpp.o guilib/GUIKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUITime.cpp.o guilib/GUITime.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUILabels.cpp.o guilib/GUILabels.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIClassifier.cpp.o guilib/GUIClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIDistance.cpp.o guilib/GUIDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LinearKernel.cpp.o kernel/LinearKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/KernelMachine.cpp.o kernel/KernelMachine.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/CustomKernel.cpp.o kernel/CustomKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/DiagKernel.cpp.o kernel/DiagKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SparsePolyKernel.cpp.o kernel/SparsePolyKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/Kernel.cpp.o kernel/Kernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/MatchWordStringKernel.cpp.o kernel/MatchWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/CommWordStringKernel.cpp.o kernel/CommWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SigmoidKernel.cpp.o kernel/SigmoidKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/FixedDegreeStringKernel.cpp.o kernel/FixedDegreeStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LocalityImprovedStringKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/GaussianShiftKernel.cpp.o kernel/GaussianShiftKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/HistogramWordStringKernel.cpp.o kernel/HistogramWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/Chi2Kernel.cpp.o kernel/Chi2Kernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/DistanceKernel.cpp.o kernel/DistanceKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SparseLinearKernel.cpp.o kernel/SparseLinearKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/ConstKernel.cpp.o kernel/ConstKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/PolyMatchWordStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/OligoKernel.cpp.o kernel/OligoKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/CommUlongStringKernel.cpp.o kernel/CommUlongStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LinearStringKernel.cpp.o kernel/LinearStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SparseGaussianKernel.cpp.o kernel/SparseGaussianKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/AUCKernel.cpp.o kernel/AUCKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LinearByteKernel.cpp.o kernel/LinearByteKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/PolyKernel.cpp.o kernel/PolyKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LinearWordKernel.cpp.o kernel/LinearWordKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LocalAlignmentStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/PyramidChi2.cpp.o kernel/PyramidChi2.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/CombinedKernel.cpp.o kernel/CombinedKernel.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from kernel/CombinedKernel.cpp:14: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/GaussianKernel.cpp.o kernel/GaussianKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SalzbergWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreeStringKernel.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from kernel/WeightedDegreeStringKernel.cpp:14: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/MindyGramKernel.cpp.o kernel/MindyGramKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from kernel/WeightedDegreePositionStringKernel.cpp:14: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShortRealKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/WeightedCommWordStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/CombinedFeatures.cpp.o features/CombinedFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/ShortRealFeatures.cpp.o features/ShortRealFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/Features.cpp.o features/Features.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/ByteFeatures.cpp.o features/ByteFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/Labels.cpp.o features/Labels.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/Alphabet.cpp.o features/Alphabet.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/MindyGramFeatures.cpp.o features/MindyGramFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/WordFeatures.cpp.o features/WordFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/IntFeatures.cpp.o features/IntFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/StringFeatures.cpp.o features/StringFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/FKFeatures.cpp.o features/FKFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/TOPFeatures.cpp.o features/TOPFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/RealFeatures.cpp.o features/RealFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/RealFileFeatures.cpp.o features/RealFileFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/CharFeatures.cpp.o features/CharFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/ShortFeatures.cpp.o features/ShortFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distributions/hmm/LinearHMM.cpp.o distributions/hmm/LinearHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distributions/hmm/GHMM.cpp.o distributions/hmm/GHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distributions/hmm/HMM.cpp.o distributions/hmm/HMM.cpp distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_likelihood_bin(FILE*)': distributions/hmm/HMM.cpp:4322: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_bin(FILE*)': distributions/hmm/HMM.cpp:4359: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4360: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4364: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4368: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4374: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4379: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4383: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4384: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4387: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4388: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4389: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4390: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4391: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4392: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4401: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4402: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4405: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4410: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4419: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4420: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4421: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4430: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4431: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4432: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4438: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4439: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4442: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4443: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4444: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4445: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4446: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4447: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_path_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4531: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4534: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4537: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4541: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4545: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4554: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4557: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4560: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4566: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4573: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4640: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4644: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4647: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4652: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4656: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4667: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4670: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4673: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4680: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4687: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distributions/histogram/Histogram.cpp.o distributions/histogram/Histogram.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distributions/Distribution.cpp.o distributions/Distribution.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/MatlabInterface.cpp.o interface/MatlabInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/RInterface.cpp.o interface/RInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/SGInterface.cpp.o interface/SGInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/PythonInterface.cpp.o interface/PythonInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/OctaveInterface.cpp.o interface/OctaveInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/CmdLineInterface.cpp.o interface/CmdLineInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/LogPlusOne.cpp.o preproc/LogPlusOne.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/NormDerivativeLem3.cpp.o preproc/NormDerivativeLem3.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/NormOne.cpp.o preproc/NormOne.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/PruneVarSubMean.cpp.o preproc/PruneVarSubMean.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/PCACut.cpp.o preproc/PCACut.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/PreProc.cpp.o preproc/PreProc.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/SortWordString.cpp.o preproc/SortWordString.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/SortUlongString.cpp.o preproc/SortUlongString.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/MultiClassSVM.cpp.o classifier/svm/MultiClassSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/GNPPSVM.cpp.o classifier/svm/GNPPSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SubGradientSVM.cpp.o classifier/svm/SubGradientSVM.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from classifier/svm/SubGradientSVM.cpp:14: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/gnpplib.cpp.o classifier/svm/gnpplib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVM.cpp.o classifier/svm/SVM.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from classifier/svm/SVM.cpp:13: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVM_linear.cpp.o classifier/svm/SVM_linear.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVMLin.cpp.o classifier/svm/SVMLin.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/libocas.cpp.o classifier/svm/libocas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/ssl.cpp.o classifier/svm/ssl.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/LibLinear.cpp.o classifier/svm/LibLinear.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVM_libsvm.cpp.o classifier/svm/SVM_libsvm.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/qpbsvmlib.cpp.o classifier/svm/qpbsvmlib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpdtsolve.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from classifier/svm/gpdtsolve.cpp:80: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/WDSVMOcas.cpp.o classifier/svm/WDSVMOcas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/GMNPSVM.cpp.o classifier/svm/GMNPSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/gmnplib.cpp.o classifier/svm/gmnplib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/gpm.cpp.o classifier/svm/gpm.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/MPDSVM.cpp.o classifier/svm/MPDSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVMOcas.cpp.o classifier/svm/SVMOcas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/Tron.cpp.o classifier/svm/Tron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/CPLEXSVM.cpp.o classifier/svm/CPLEXSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/qpssvmlib.cpp.o classifier/svm/qpssvmlib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/pr_loqo.cpp.o classifier/svm/pr_loqo.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVMSGD.cpp.o classifier/svm/SVMSGD.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/gpdt.cpp.o classifier/svm/gpdt.cpp classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadGPDTBinary(char*)': classifier/svm/gpdt.cpp:220: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:227: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:228: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:235: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:236: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:242: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:243: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadSVMFile(char*)': classifier/svm/gpdt.cpp:296: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:347: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/LibSVMMultiClass.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/LibSVMOneClass.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/GPBTSVM.cpp.o classifier/svm/GPBTSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/LDA.cpp.o classifier/LDA.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/KNN.cpp.o classifier/KNN.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/Perceptron.cpp.o classifier/Perceptron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/PluginEstimate.cpp.o classifier/PluginEstimate.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/LPM.cpp.o classifier/LPM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/SparseLinearClassifier.cpp.o classifier/SparseLinearClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/Classifier.cpp.o classifier/Classifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/LPBoost.cpp.o classifier/LPBoost.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/LinearClassifier.cpp.o classifier/LinearClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/KernelPerceptron.cpp.o classifier/KernelPerceptron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/SubGradientLPM.cpp.o classifier/SubGradientLPM.cpp doxygen lib/Library.doxy python2.4 .doxy2swig.py --quiet --no-function-definition lib/doxygen_xml/index.xml lib/Library_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL lib/Library.i lib/Trie.h:69: Warning(312): Nested union not currently supported (ignored). lib/Trie.h:98: Warning(312): Nested union not currently supported (ignored). lib/Trie.h:164: Warning(362): operator= ignored lib/DynamicArray.h:257: Warning(389): operator[] ignored (consider using %extend) lib/DynamicArray.h:272: Warning(362): operator= ignored lib/Array.h:328: Warning(389): operator[] ignored (consider using %extend) lib/Array.h:341: Warning(389): operator[] ignored (consider using %extend) lib/Array.h:354: Warning(362): operator= ignored lib/Array2.h:232: Warning(362): operator= ignored lib/Array3.h:275: Warning(362): operator= ignored python2.4 .scrub_docstrings.py .py lib/Library_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/Library_wrap.cxx.o lib/Library_wrap.cxx In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from lib/Library_wrap.cxx:3149: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' doxygen clustering/Clustering.doxy python2.4 .doxy2swig.py --quiet --no-function-definition clustering/doxygen_xml/index.xml clustering/Clustering_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL clustering/Clustering.i python2.4 .scrub_docstrings.py .py clustering/Clustering_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o clustering/Clustering_wrap.cxx.o clustering/Clustering_wrap.cxx In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from clustering/Clustering_wrap.cxx:2643: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' doxygen regression/Regression.doxy python2.4 .doxy2swig.py --quiet --no-function-definition regression/doxygen_xml/index.xml regression/Regression_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL regression/Regression.i python2.4 .scrub_docstrings.py .py regression/Regression_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o regression/Regression_wrap.cxx.o regression/Regression_wrap.cxx In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from regression/Regression_wrap.cxx:2972: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' doxygen evaluation/Evaluation.doxy python2.4 .doxy2swig.py --quiet --no-function-definition evaluation/doxygen_xml/index.xml evaluation/Evaluation_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL evaluation/Evaluation.i python2.4 .scrub_docstrings.py .py evaluation/Evaluation_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o evaluation/Evaluation_wrap.cxx.o evaluation/Evaluation_wrap.cxx In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from evaluation/Evaluation_wrap.cxx:2638: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' doxygen structure/Structure.doxy python2.4 .doxy2swig.py --quiet --no-function-definition structure/doxygen_xml/index.xml structure/Structure_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL structure/Structure.i python2.4 .scrub_docstrings.py .py structure/Structure_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o structure/Structure_wrap.cxx.o structure/Structure_wrap.cxx In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from structure/Structure_wrap.cxx:2640: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' doxygen distance/Distance.doxy python2.4 .doxy2swig.py --quiet --no-function-definition distance/doxygen_xml/index.xml distance/Distance_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL distance/Distance.i python2.4 .scrub_docstrings.py .py distance/Distance_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/Distance_wrap.cxx.o distance/Distance_wrap.cxx In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from distance/Distance_wrap.cxx:2673: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' doxygen kernel/Kernel.doxy python2.4 .doxy2swig.py --quiet --no-function-definition kernel/doxygen_xml/index.xml kernel/Kernel_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL kernel/Kernel.i python2.4 .scrub_docstrings.py .py kernel/Kernel_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/Kernel_wrap.cxx.o kernel/Kernel_wrap.cxx In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from kernel/Kernel_wrap.cxx:2712: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' doxygen features/Features.doxy python2.4 .doxy2swig.py --quiet --no-function-definition features/doxygen_xml/index.xml features/Features_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL features/Features.i python2.4 .scrub_docstrings.py .py features/Features_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/Features_wrap.cxx.o features/Features_wrap.cxx In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from features/Features_wrap.cxx:3033: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = char]': features/Features_wrap.cxx:9168: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = unsigned char]': features/Features_wrap.cxx:11624: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = short int]': features/Features_wrap.cxx:14079: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = short unsigned int]': features/Features_wrap.cxx:16446: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = int]': features/Features_wrap.cxx:18813: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = unsigned int]': features/Features_wrap.cxx:21180: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = long long int]': features/Features_wrap.cxx:23547: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = long long unsigned int]': features/Features_wrap.cxx:25914: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result doxygen distributions/Distribution.doxy python2.4 .doxy2swig.py --quiet --no-function-definition distributions/doxygen_xml/index.xml distributions/Distribution_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL distributions/Distribution.i python2.4 .scrub_docstrings.py .py distributions/Distribution_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distributions/Distribution_wrap.cxx.o distributions/Distribution_wrap.cxx In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from distributions/Distribution_wrap.cxx:2646: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' doxygen preproc/PreProc.doxy python2.4 .doxy2swig.py --quiet --no-function-definition preproc/doxygen_xml/index.xml preproc/PreProc_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL preproc/PreProc.i python2.4 .scrub_docstrings.py .py preproc/PreProc_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/PreProc_wrap.cxx.o preproc/PreProc_wrap.cxx doxygen classifier/Classifier.doxy python2.4 .doxy2swig.py --quiet --no-function-definition classifier/doxygen_xml/index.xml classifier/Classifier_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL classifier/Classifier.i python2.4 .scrub_docstrings.py .py classifier/Classifier_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/Classifier_wrap.cxx.o classifier/Classifier_wrap.cxx In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from classifier/Classifier_wrap.cxx:2979: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' c++ -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o classifier/_Classifier.so classifier/Classifier_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o classifier/LinearClassifier.cpp.o classifier/Perceptron.cpp.o classifier/LDA.cpp.o classifier/SparseLinearClassifier.cpp.o classifier/svm/SVMLin.cpp.o classifier/svm/ssl.cpp.o classifier/svm/LibLinear.cpp.o classifier/svm/Tron.cpp.o classifier/svm/SVM_linear.cpp.o classifier/svm/SubGradientSVM.cpp.o kernel/Kernel.cpp.o kernel/KernelMachine.cpp.o classifier/svm/SVM.cpp.o classifier/svm/qpbsvmlib.cpp.o lib/Cplex.cpp.o classifier/svm/pr_loqo.cpp.o classifier/svm/SVMSGD.cpp.o classifier/SubGradientLPM.cpp.o classifier/svm/SVMOcas.cpp.o classifier/svm/libocas.cpp.o classifier/svm/qpssvmlib.cpp.o classifier/LPM.cpp.o classifier/LPBoost.cpp.o distributions/Distribution.cpp.o distributions/hmm/LinearHMM.cpp.o classifier/PluginEstimate.cpp.o classifier/KernelPerceptron.cpp.o classifier/svm/MultiClassSVM.cpp.o classifier/svm/SVM_libsvm.cpp.o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/GMNPSVM.cpp.o classifier/svm/gmnplib.cpp.o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/GPBTSVM.cpp.o classifier/svm/gpdt.cpp.o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpm.cpp.o classifier/svm/GNPPSVM.cpp.o classifier/svm/gnpplib.cpp.o classifier/svm/MPDSVM.cpp.o distance/Distance.cpp.o distance/DistanceMachine.cpp.o classifier/KNN.cpp.o classifier/svm/WDSVMOcas.cpp.o -shared -lpython2.4 c++ -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o clustering/_Clustering.so clustering/Clustering_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o distance/Distance.cpp.o distance/DistanceMachine.cpp.o clustering/KMeans.cpp.o clustering/Hierarchical.cpp.o -shared -lpython2.4 c++ -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o distance/_Distance.so distance/Distance_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o distance/Distance.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o distance/CanberraMetric.cpp.o distance/ChebyshewMetric.cpp.o distance/GeodesicMetric.cpp.o distance/JensenMetric.cpp.o distance/ManhattanMetric.cpp.o distance/MinkowskiMetric.cpp.o distance/HammingWordDistance.cpp.o distance/ManhattanWordDistance.cpp.o distance/CanberraWordDistance.cpp.o distance/EuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp.o distance/BrayCurtisDistance.cpp.o distance/ChiSquareDistance.cpp.o distance/CosineDistance.cpp.o distance/TanimotoDistance.cpp.o -shared -lpython2.4 c++ -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o distributions/_Distribution.so distributions/Distribution_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o distributions/Distribution.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o distributions/histogram/Histogram.cpp.o distributions/hmm/HMM.cpp.o distributions/hmm/GHMM.cpp.o distributions/hmm/LinearHMM.cpp.o -shared -lpython2.4 c++ -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o evaluation/_Evaluation.so evaluation/Evaluation_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o evaluation/PerformanceMeasures.cpp.o -shared -lpython2.4 c++ -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o features/_Features.so features/Features_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o features/ByteFeatures.cpp.o features/ShortFeatures.cpp.o features/WordFeatures.cpp.o features/ShortRealFeatures.cpp.o features/CombinedFeatures.cpp.o features/MindyGramFeatures.cpp.o features/RealFileFeatures.cpp.o distributions/Distribution.cpp.o distributions/hmm/HMM.cpp.o features/FKFeatures.cpp.o features/TOPFeatures.cpp.o -shared -lpython2.4 c++ -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o kernel/_Kernel.so kernel/Kernel_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o kernel/Kernel.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o kernel/KernelMachine.cpp.o classifier/svm/SVM.cpp.o kernel/ConstKernel.cpp.o kernel/DiagKernel.cpp.o kernel/LinearKernel.cpp.o kernel/PolyKernel.cpp.o kernel/CommWordStringKernel.cpp.o kernel/GaussianKernel.cpp.o features/ShortRealFeatures.cpp.o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShiftKernel.cpp.o kernel/SigmoidKernel.cpp.o kernel/SparseGaussianKernel.cpp.o kernel/SparseLinearKernel.cpp.o kernel/SparsePolyKernel.cpp.o kernel/Chi2Kernel.cpp.o features/WordFeatures.cpp.o kernel/AUCKernel.cpp.o lib/Trie.cpp.o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/CommUlongStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp.o kernel/MindyGramKernel.cpp.o features/MindyGramFeatures.cpp.o kernel/OligoKernel.cpp.o kernel/FixedDegreeStringKernel.cpp.o distributions/Distribution.cpp.o distributions/hmm/LinearHMM.cpp.o classifier/PluginEstimate.cpp.o kernel/HistogramWordStringKernel.cpp.o features/ByteFeatures.cpp.o kernel/LinearByteKernel.cpp.o kernel/LinearStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp.o kernel/LinearWordKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/MatchWordStringKernel.cpp.o features/CombinedFeatures.cpp.o kernel/CombinedKernel.cpp.o kernel/CustomKernel.cpp.o distance/Distance.cpp.o kernel/DistanceKernel.cpp.o -shared -lpython2.4 c++ -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o lib/_Library.so lib/Library_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o lib/Trie.cpp.o -shared -lpython2.4 c++ -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o preproc/_PreProc.so preproc/PreProc_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Features.cpp.o preproc/PreProc.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o preproc/LogPlusOne.cpp.o preproc/NormDerivativeLem3.cpp.o preproc/NormOne.cpp.o preproc/PCACut.cpp.o preproc/PruneVarSubMean.cpp.o preproc/SortUlongString.cpp.o preproc/SortWordString.cpp.o -shared -lpython2.4 c++ -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o regression/_Regression.so regression/Regression_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o kernel/Kernel.cpp.o classifier/svm/SVM.cpp.o kernel/KernelMachine.cpp.o regression/KRR.cpp.o classifier/svm/SVM_libsvm.cpp.o classifier/svm/LibSVM.cpp.o regression/svr/LibSVR.cpp.o -shared -lpython2.4 c++ -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o structure/_Structure.so structure/Structure_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o base/Parallel.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/lapack.cpp.o lib/Mathematics.cpp.o lib/Signal.cpp.o lib/io.cpp.o lib/Time.cpp.o structure/Plif.cpp.o structure/PlifArray.cpp.o features/Features.cpp.o preproc/PreProc.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o distributions/Distribution.cpp.o structure/DynProg.cpp.o -shared -lpython2.4 ============================================================ ==== Done. Start with shogun. ============================================================ make[2]: Leaving directory `/build/buildd/shogun-0.6.7/build-python-modular2.4' make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python-modular2.4' + /usr/bin/make -C build-python-modular2.5 make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python-modular2.5' ================================= ==== Generating dependencies ==== ================================= find . -mindepth 2 -name "*.c" -o -name "*.cpp" \ -exec gcc -MM -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. {} -MT {}.o \; >.depend find . -mindepth 2 -name "*.i" -o \ -name "*.h" -o -name "*.cpp" -o -name "*.cpp" | \ cut -c 3- | \ python2.5 .generate_link_dependencies.py "_" "so" >>.depend test -f .depend && make make[2]: Entering directory `/build/buildd/shogun-0.6.7/build-python-modular2.5' ======================================================================================== ==== Building shogun for platform Linux-ppc target swig ==== opts: -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread ======================================================================================== c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/File.cpp.o lib/File.cpp lib/File.cpp: In member function 'bool CFile::write_char_valued_strings(const T_STRING*, int32_t)': lib/File.cpp:646: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/memory.cpp.o lib/memory.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/lapack.cpp.o lib/lapack.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/Cplex.cpp.o lib/Cplex.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/Mathematics.cpp.o lib/Mathematics.cpp lib/Mathematics.cpp: In static member function 'static int32_t CMath::calcroc(float64_t*, float64_t*, float64_t*, int32_t*, int32_t&, int32_t&, int32_t&, float64_t&, FILE*)': lib/Mathematics.cpp:345: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:346: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:347: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/Time.cpp.o lib/Time.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/io.cpp.o lib/io.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/Trie.cpp.o lib/Trie.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/Signal.cpp.o lib/Signal.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/ShogunException.cpp.o lib/ShogunException.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o base/Version.cpp.o base/Version.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o base/SGObject.cpp.o base/SGObject.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o base/Parallel.cpp.o base/Parallel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o clustering/Hierarchical.cpp.o clustering/Hierarchical.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o clustering/KMeans.cpp.o clustering/KMeans.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o regression/svr/LibSVR.cpp.o regression/svr/LibSVR.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o regression/KRR.cpp.o regression/KRR.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o evaluation/PerformanceMeasures.cpp.o evaluation/PerformanceMeasures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o structure/Plif.cpp.o structure/Plif.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o structure/DynProg.cpp.o structure/DynProg.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o structure/PlifArray.cpp.o structure/PlifArray.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/BrayCurtisDistance.cpp.o distance/BrayCurtisDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/EuclidianDistance.cpp.o distance/EuclidianDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/CanberraMetric.cpp.o distance/CanberraMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/ChebyshewMetric.cpp.o distance/ChebyshewMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/JensenMetric.cpp.o distance/JensenMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/GeodesicMetric.cpp.o distance/GeodesicMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/CanberraWordDistance.cpp.o distance/CanberraWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/ManhattanMetric.cpp.o distance/ManhattanMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/SparseEuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/ChiSquareDistance.cpp.o distance/ChiSquareDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/TanimotoDistance.cpp.o distance/TanimotoDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/HammingWordDistance.cpp.o distance/HammingWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/MinkowskiMetric.cpp.o distance/MinkowskiMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/ManhattanWordDistance.cpp.o distance/ManhattanWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/Distance.cpp.o distance/Distance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/CosineDistance.cpp.o distance/CosineDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/DistanceMachine.cpp.o distance/DistanceMachine.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIPreProc.cpp.o guilib/GUIPreProc.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIHMM.cpp.o guilib/GUIHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIFeatures.cpp.o guilib/GUIFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIMath.cpp.o guilib/GUIMath.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIStructure.cpp.o guilib/GUIStructure.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIPluginEstimate.cpp.o guilib/GUIPluginEstimate.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIKernel.cpp.o guilib/GUIKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUITime.cpp.o guilib/GUITime.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUILabels.cpp.o guilib/GUILabels.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIClassifier.cpp.o guilib/GUIClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIDistance.cpp.o guilib/GUIDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LinearKernel.cpp.o kernel/LinearKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/KernelMachine.cpp.o kernel/KernelMachine.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/CustomKernel.cpp.o kernel/CustomKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/DiagKernel.cpp.o kernel/DiagKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SparsePolyKernel.cpp.o kernel/SparsePolyKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/Kernel.cpp.o kernel/Kernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/MatchWordStringKernel.cpp.o kernel/MatchWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/CommWordStringKernel.cpp.o kernel/CommWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SigmoidKernel.cpp.o kernel/SigmoidKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/FixedDegreeStringKernel.cpp.o kernel/FixedDegreeStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LocalityImprovedStringKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/GaussianShiftKernel.cpp.o kernel/GaussianShiftKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/HistogramWordStringKernel.cpp.o kernel/HistogramWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/Chi2Kernel.cpp.o kernel/Chi2Kernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/DistanceKernel.cpp.o kernel/DistanceKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SparseLinearKernel.cpp.o kernel/SparseLinearKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/ConstKernel.cpp.o kernel/ConstKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/PolyMatchWordStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/OligoKernel.cpp.o kernel/OligoKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/CommUlongStringKernel.cpp.o kernel/CommUlongStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LinearStringKernel.cpp.o kernel/LinearStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SparseGaussianKernel.cpp.o kernel/SparseGaussianKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/AUCKernel.cpp.o kernel/AUCKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LinearByteKernel.cpp.o kernel/LinearByteKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/PolyKernel.cpp.o kernel/PolyKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LinearWordKernel.cpp.o kernel/LinearWordKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LocalAlignmentStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/PyramidChi2.cpp.o kernel/PyramidChi2.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/CombinedKernel.cpp.o kernel/CombinedKernel.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/GaussianKernel.cpp.o kernel/GaussianKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SalzbergWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreeStringKernel.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/MindyGramKernel.cpp.o kernel/MindyGramKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShortRealKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/WeightedCommWordStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/CombinedFeatures.cpp.o features/CombinedFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/ShortRealFeatures.cpp.o features/ShortRealFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/Features.cpp.o features/Features.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/ByteFeatures.cpp.o features/ByteFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/Labels.cpp.o features/Labels.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/Alphabet.cpp.o features/Alphabet.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/MindyGramFeatures.cpp.o features/MindyGramFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/WordFeatures.cpp.o features/WordFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/IntFeatures.cpp.o features/IntFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/StringFeatures.cpp.o features/StringFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/FKFeatures.cpp.o features/FKFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/TOPFeatures.cpp.o features/TOPFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/RealFeatures.cpp.o features/RealFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/RealFileFeatures.cpp.o features/RealFileFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/CharFeatures.cpp.o features/CharFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/ShortFeatures.cpp.o features/ShortFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distributions/hmm/LinearHMM.cpp.o distributions/hmm/LinearHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distributions/hmm/GHMM.cpp.o distributions/hmm/GHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distributions/hmm/HMM.cpp.o distributions/hmm/HMM.cpp distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_likelihood_bin(FILE*)': distributions/hmm/HMM.cpp:4322: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_bin(FILE*)': distributions/hmm/HMM.cpp:4359: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4360: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4364: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4368: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4374: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4379: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4383: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4384: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4387: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4388: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4389: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4390: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4391: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4392: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4401: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4402: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4405: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4410: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4419: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4420: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4421: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4430: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4431: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4432: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4438: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4439: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4442: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4443: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4444: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4445: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4446: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4447: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_path_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4531: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4534: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4537: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4541: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4545: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4554: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4557: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4560: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4566: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4573: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4640: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4644: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4647: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4652: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4656: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4667: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4670: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4673: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4680: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4687: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distributions/histogram/Histogram.cpp.o distributions/histogram/Histogram.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distributions/Distribution.cpp.o distributions/Distribution.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/MatlabInterface.cpp.o interface/MatlabInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/RInterface.cpp.o interface/RInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/SGInterface.cpp.o interface/SGInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/PythonInterface.cpp.o interface/PythonInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/OctaveInterface.cpp.o interface/OctaveInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/CmdLineInterface.cpp.o interface/CmdLineInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/LogPlusOne.cpp.o preproc/LogPlusOne.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/NormDerivativeLem3.cpp.o preproc/NormDerivativeLem3.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/NormOne.cpp.o preproc/NormOne.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/PruneVarSubMean.cpp.o preproc/PruneVarSubMean.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/PCACut.cpp.o preproc/PCACut.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/PreProc.cpp.o preproc/PreProc.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/SortWordString.cpp.o preproc/SortWordString.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/SortUlongString.cpp.o preproc/SortUlongString.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/MultiClassSVM.cpp.o classifier/svm/MultiClassSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/GNPPSVM.cpp.o classifier/svm/GNPPSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SubGradientSVM.cpp.o classifier/svm/SubGradientSVM.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/gnpplib.cpp.o classifier/svm/gnpplib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVM.cpp.o classifier/svm/SVM.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVM_linear.cpp.o classifier/svm/SVM_linear.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVMLin.cpp.o classifier/svm/SVMLin.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/libocas.cpp.o classifier/svm/libocas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/ssl.cpp.o classifier/svm/ssl.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/LibLinear.cpp.o classifier/svm/LibLinear.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVM_libsvm.cpp.o classifier/svm/SVM_libsvm.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/qpbsvmlib.cpp.o classifier/svm/qpbsvmlib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpdtsolve.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/WDSVMOcas.cpp.o classifier/svm/WDSVMOcas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/GMNPSVM.cpp.o classifier/svm/GMNPSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/gmnplib.cpp.o classifier/svm/gmnplib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/gpm.cpp.o classifier/svm/gpm.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/MPDSVM.cpp.o classifier/svm/MPDSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVMOcas.cpp.o classifier/svm/SVMOcas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/Tron.cpp.o classifier/svm/Tron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/CPLEXSVM.cpp.o classifier/svm/CPLEXSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/qpssvmlib.cpp.o classifier/svm/qpssvmlib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/pr_loqo.cpp.o classifier/svm/pr_loqo.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVMSGD.cpp.o classifier/svm/SVMSGD.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/gpdt.cpp.o classifier/svm/gpdt.cpp classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadGPDTBinary(char*)': classifier/svm/gpdt.cpp:220: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:227: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:228: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:235: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:236: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:242: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:243: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadSVMFile(char*)': classifier/svm/gpdt.cpp:296: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:347: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/LibSVMMultiClass.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/LibSVMOneClass.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/GPBTSVM.cpp.o classifier/svm/GPBTSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/LDA.cpp.o classifier/LDA.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/KNN.cpp.o classifier/KNN.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/Perceptron.cpp.o classifier/Perceptron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/PluginEstimate.cpp.o classifier/PluginEstimate.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/LPM.cpp.o classifier/LPM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/SparseLinearClassifier.cpp.o classifier/SparseLinearClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/Classifier.cpp.o classifier/Classifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/LPBoost.cpp.o classifier/LPBoost.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/LinearClassifier.cpp.o classifier/LinearClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/KernelPerceptron.cpp.o classifier/KernelPerceptron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/SubGradientLPM.cpp.o classifier/SubGradientLPM.cpp doxygen lib/Library.doxy python2.5 .doxy2swig.py --quiet --no-function-definition lib/doxygen_xml/index.xml lib/Library_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL lib/Library.i lib/Trie.h:69: Warning(312): Nested union not currently supported (ignored). lib/Trie.h:98: Warning(312): Nested union not currently supported (ignored). lib/Trie.h:164: Warning(362): operator= ignored lib/DynamicArray.h:257: Warning(389): operator[] ignored (consider using %extend) lib/DynamicArray.h:272: Warning(362): operator= ignored lib/Array.h:328: Warning(389): operator[] ignored (consider using %extend) lib/Array.h:341: Warning(389): operator[] ignored (consider using %extend) lib/Array.h:354: Warning(362): operator= ignored lib/Array2.h:232: Warning(362): operator= ignored lib/Array3.h:275: Warning(362): operator= ignored python2.5 .scrub_docstrings.py .py lib/Library_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/Library_wrap.cxx.o lib/Library_wrap.cxx doxygen clustering/Clustering.doxy python2.5 .doxy2swig.py --quiet --no-function-definition clustering/doxygen_xml/index.xml clustering/Clustering_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL clustering/Clustering.i python2.5 .scrub_docstrings.py .py clustering/Clustering_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o clustering/Clustering_wrap.cxx.o clustering/Clustering_wrap.cxx doxygen regression/Regression.doxy python2.5 .doxy2swig.py --quiet --no-function-definition regression/doxygen_xml/index.xml regression/Regression_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL regression/Regression.i python2.5 .scrub_docstrings.py .py regression/Regression_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o regression/Regression_wrap.cxx.o regression/Regression_wrap.cxx doxygen evaluation/Evaluation.doxy python2.5 .doxy2swig.py --quiet --no-function-definition evaluation/doxygen_xml/index.xml evaluation/Evaluation_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL evaluation/Evaluation.i python2.5 .scrub_docstrings.py .py evaluation/Evaluation_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o evaluation/Evaluation_wrap.cxx.o evaluation/Evaluation_wrap.cxx doxygen structure/Structure.doxy python2.5 .doxy2swig.py --quiet --no-function-definition structure/doxygen_xml/index.xml structure/Structure_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL structure/Structure.i python2.5 .scrub_docstrings.py .py structure/Structure_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o structure/Structure_wrap.cxx.o structure/Structure_wrap.cxx doxygen distance/Distance.doxy python2.5 .doxy2swig.py --quiet --no-function-definition distance/doxygen_xml/index.xml distance/Distance_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL distance/Distance.i python2.5 .scrub_docstrings.py .py distance/Distance_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/Distance_wrap.cxx.o distance/Distance_wrap.cxx doxygen kernel/Kernel.doxy python2.5 .doxy2swig.py --quiet --no-function-definition kernel/doxygen_xml/index.xml kernel/Kernel_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL kernel/Kernel.i python2.5 .scrub_docstrings.py .py kernel/Kernel_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/Kernel_wrap.cxx.o kernel/Kernel_wrap.cxx doxygen features/Features.doxy python2.5 .doxy2swig.py --quiet --no-function-definition features/doxygen_xml/index.xml features/Features_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL features/Features.i python2.5 .scrub_docstrings.py .py features/Features_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/Features_wrap.cxx.o features/Features_wrap.cxx ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = char]': features/Features_wrap.cxx:9168: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = unsigned char]': features/Features_wrap.cxx:11624: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = short int]': features/Features_wrap.cxx:14079: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = short unsigned int]': features/Features_wrap.cxx:16446: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = int]': features/Features_wrap.cxx:18813: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = unsigned int]': features/Features_wrap.cxx:21180: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = long long int]': features/Features_wrap.cxx:23547: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = long long unsigned int]': features/Features_wrap.cxx:25914: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result doxygen distributions/Distribution.doxy python2.5 .doxy2swig.py --quiet --no-function-definition distributions/doxygen_xml/index.xml distributions/Distribution_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL distributions/Distribution.i python2.5 .scrub_docstrings.py .py distributions/Distribution_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distributions/Distribution_wrap.cxx.o distributions/Distribution_wrap.cxx doxygen preproc/PreProc.doxy python2.5 .doxy2swig.py --quiet --no-function-definition preproc/doxygen_xml/index.xml preproc/PreProc_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL preproc/PreProc.i python2.5 .scrub_docstrings.py .py preproc/PreProc_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/PreProc_wrap.cxx.o preproc/PreProc_wrap.cxx doxygen classifier/Classifier.doxy python2.5 .doxy2swig.py --quiet --no-function-definition classifier/doxygen_xml/index.xml classifier/Classifier_doxygen.i swig -w473 -c++ -python -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL classifier/Classifier.i python2.5 .scrub_docstrings.py .py classifier/Classifier_wrap.cxx c++ -fno-strict-aliasing -fPIC -g -O2 -g -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/Classifier_wrap.cxx.o classifier/Classifier_wrap.cxx c++ -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o classifier/_Classifier.so classifier/Classifier_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o classifier/LinearClassifier.cpp.o classifier/Perceptron.cpp.o classifier/LDA.cpp.o classifier/SparseLinearClassifier.cpp.o classifier/svm/SVMLin.cpp.o classifier/svm/ssl.cpp.o classifier/svm/LibLinear.cpp.o classifier/svm/Tron.cpp.o classifier/svm/SVM_linear.cpp.o classifier/svm/SubGradientSVM.cpp.o kernel/Kernel.cpp.o kernel/KernelMachine.cpp.o classifier/svm/SVM.cpp.o classifier/svm/qpbsvmlib.cpp.o lib/Cplex.cpp.o classifier/svm/pr_loqo.cpp.o classifier/svm/SVMSGD.cpp.o classifier/SubGradientLPM.cpp.o classifier/svm/SVMOcas.cpp.o classifier/svm/libocas.cpp.o classifier/svm/qpssvmlib.cpp.o classifier/LPM.cpp.o classifier/LPBoost.cpp.o distributions/Distribution.cpp.o distributions/hmm/LinearHMM.cpp.o classifier/PluginEstimate.cpp.o classifier/KernelPerceptron.cpp.o classifier/svm/MultiClassSVM.cpp.o classifier/svm/SVM_libsvm.cpp.o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/GMNPSVM.cpp.o classifier/svm/gmnplib.cpp.o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/GPBTSVM.cpp.o classifier/svm/gpdt.cpp.o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpm.cpp.o classifier/svm/GNPPSVM.cpp.o classifier/svm/gnpplib.cpp.o classifier/svm/MPDSVM.cpp.o distance/Distance.cpp.o distance/DistanceMachine.cpp.o classifier/KNN.cpp.o classifier/svm/WDSVMOcas.cpp.o -shared -lpython2.5 c++ -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o clustering/_Clustering.so clustering/Clustering_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o distance/Distance.cpp.o distance/DistanceMachine.cpp.o clustering/KMeans.cpp.o clustering/Hierarchical.cpp.o -shared -lpython2.5 c++ -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o distance/_Distance.so distance/Distance_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o distance/Distance.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o distance/CanberraMetric.cpp.o distance/ChebyshewMetric.cpp.o distance/GeodesicMetric.cpp.o distance/JensenMetric.cpp.o distance/ManhattanMetric.cpp.o distance/MinkowskiMetric.cpp.o distance/HammingWordDistance.cpp.o distance/ManhattanWordDistance.cpp.o distance/CanberraWordDistance.cpp.o distance/EuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp.o distance/BrayCurtisDistance.cpp.o distance/ChiSquareDistance.cpp.o distance/CosineDistance.cpp.o distance/TanimotoDistance.cpp.o -shared -lpython2.5 c++ -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o distributions/_Distribution.so distributions/Distribution_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o distributions/Distribution.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o distributions/histogram/Histogram.cpp.o distributions/hmm/HMM.cpp.o distributions/hmm/GHMM.cpp.o distributions/hmm/LinearHMM.cpp.o -shared -lpython2.5 c++ -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o evaluation/_Evaluation.so evaluation/Evaluation_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o evaluation/PerformanceMeasures.cpp.o -shared -lpython2.5 c++ -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o features/_Features.so features/Features_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o features/ByteFeatures.cpp.o features/ShortFeatures.cpp.o features/WordFeatures.cpp.o features/ShortRealFeatures.cpp.o features/CombinedFeatures.cpp.o features/MindyGramFeatures.cpp.o features/RealFileFeatures.cpp.o distributions/Distribution.cpp.o distributions/hmm/HMM.cpp.o features/FKFeatures.cpp.o features/TOPFeatures.cpp.o -shared -lpython2.5 c++ -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o kernel/_Kernel.so kernel/Kernel_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o kernel/Kernel.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o kernel/KernelMachine.cpp.o classifier/svm/SVM.cpp.o kernel/ConstKernel.cpp.o kernel/DiagKernel.cpp.o kernel/LinearKernel.cpp.o kernel/PolyKernel.cpp.o kernel/CommWordStringKernel.cpp.o kernel/GaussianKernel.cpp.o features/ShortRealFeatures.cpp.o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShiftKernel.cpp.o kernel/SigmoidKernel.cpp.o kernel/SparseGaussianKernel.cpp.o kernel/SparseLinearKernel.cpp.o kernel/SparsePolyKernel.cpp.o kernel/Chi2Kernel.cpp.o features/WordFeatures.cpp.o kernel/AUCKernel.cpp.o lib/Trie.cpp.o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/CommUlongStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp.o kernel/MindyGramKernel.cpp.o features/MindyGramFeatures.cpp.o kernel/OligoKernel.cpp.o kernel/FixedDegreeStringKernel.cpp.o distributions/Distribution.cpp.o distributions/hmm/LinearHMM.cpp.o classifier/PluginEstimate.cpp.o kernel/HistogramWordStringKernel.cpp.o features/ByteFeatures.cpp.o kernel/LinearByteKernel.cpp.o kernel/LinearStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp.o kernel/LinearWordKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/MatchWordStringKernel.cpp.o features/CombinedFeatures.cpp.o kernel/CombinedKernel.cpp.o kernel/CustomKernel.cpp.o distance/Distance.cpp.o kernel/DistanceKernel.cpp.o -shared -lpython2.5 c++ -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o lib/_Library.so lib/Library_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o lib/Trie.cpp.o -shared -lpython2.5 c++ -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o preproc/_PreProc.so preproc/PreProc_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Features.cpp.o preproc/PreProc.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o preproc/LogPlusOne.cpp.o preproc/NormDerivativeLem3.cpp.o preproc/NormOne.cpp.o preproc/PCACut.cpp.o preproc/PruneVarSubMean.cpp.o preproc/SortUlongString.cpp.o preproc/SortWordString.cpp.o -shared -lpython2.5 c++ -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o regression/_Regression.so regression/Regression_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o kernel/Kernel.cpp.o classifier/svm/SVM.cpp.o kernel/KernelMachine.cpp.o regression/KRR.cpp.o classifier/svm/SVM_libsvm.cpp.o classifier/svm/LibSVM.cpp.o regression/svr/LibSVR.cpp.o -shared -lpython2.5 c++ -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o structure/_Structure.so structure/Structure_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o base/Parallel.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/lapack.cpp.o lib/Mathematics.cpp.o lib/Signal.cpp.o lib/io.cpp.o lib/Time.cpp.o structure/Plif.cpp.o structure/PlifArray.cpp.o features/Features.cpp.o preproc/PreProc.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o distributions/Distribution.cpp.o structure/DynProg.cpp.o -shared -lpython2.5 ============================================================ ==== Done. Start with shogun. ============================================================ make[2]: Leaving directory `/build/buildd/shogun-0.6.7/build-python-modular2.5' make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python-modular2.5' touch debian/stamp-build-python-modular set -x; /usr/bin/make -C build-python2.4; /usr/bin/make -C build-python2.5; + /usr/bin/make -C build-python2.4 make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python2.4' ================================= ==== Generating dependencies ==== ================================= find . -mindepth 2 -name "*.c" -o -name "*.cpp" \ -exec gcc -MM -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. {} -MT {}.o \; >.depend find . -mindepth 2 -name "*.i" -o \ -name "*.h" -o -name "*.cpp" -o -name "*.cpp" | \ cut -c 3- | \ python2.4 .generate_link_dependencies.py "_" "so" >>.depend test -f .depend && make make[2]: Entering directory `/build/buildd/shogun-0.6.7/build-python2.4' ======================================================================================== ==== Building shogun for platform Linux-ppc target sg.so ==== opts: -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread ======================================================================================== c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/File.cpp.o lib/File.cpp lib/File.cpp: In member function 'bool CFile::write_char_valued_strings(const T_STRING*, int32_t)': lib/File.cpp:646: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/memory.cpp.o lib/memory.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/lapack.cpp.o lib/lapack.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/Cplex.cpp.o lib/Cplex.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/Mathematics.cpp.o lib/Mathematics.cpp lib/Mathematics.cpp: In static member function 'static int32_t CMath::calcroc(float64_t*, float64_t*, float64_t*, int32_t*, int32_t&, int32_t&, int32_t&, float64_t&, FILE*)': lib/Mathematics.cpp:345: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:346: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:347: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/Time.cpp.o lib/Time.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/io.cpp.o lib/io.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from lib/io.cpp:16: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/Trie.cpp.o lib/Trie.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/Signal.cpp.o lib/Signal.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from lib/Signal.cpp:14: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o lib/ShogunException.cpp.o lib/ShogunException.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from lib/ShogunException.cpp:2: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o base/Version.cpp.o base/Version.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o base/SGObject.cpp.o base/SGObject.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o base/Parallel.cpp.o base/Parallel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o clustering/Hierarchical.cpp.o clustering/Hierarchical.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o clustering/KMeans.cpp.o clustering/KMeans.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o regression/svr/LibSVR.cpp.o regression/svr/LibSVR.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o regression/KRR.cpp.o regression/KRR.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o evaluation/PerformanceMeasures.cpp.o evaluation/PerformanceMeasures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o structure/Plif.cpp.o structure/Plif.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o structure/DynProg.cpp.o structure/DynProg.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o structure/PlifArray.cpp.o structure/PlifArray.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/BrayCurtisDistance.cpp.o distance/BrayCurtisDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/EuclidianDistance.cpp.o distance/EuclidianDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/CanberraMetric.cpp.o distance/CanberraMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/ChebyshewMetric.cpp.o distance/ChebyshewMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/JensenMetric.cpp.o distance/JensenMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/GeodesicMetric.cpp.o distance/GeodesicMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/CanberraWordDistance.cpp.o distance/CanberraWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/ManhattanMetric.cpp.o distance/ManhattanMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/SparseEuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/ChiSquareDistance.cpp.o distance/ChiSquareDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/TanimotoDistance.cpp.o distance/TanimotoDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/HammingWordDistance.cpp.o distance/HammingWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/MinkowskiMetric.cpp.o distance/MinkowskiMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/ManhattanWordDistance.cpp.o distance/ManhattanWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/Distance.cpp.o distance/Distance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/CosineDistance.cpp.o distance/CosineDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distance/DistanceMachine.cpp.o distance/DistanceMachine.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIPreProc.cpp.o guilib/GUIPreProc.cpp guilib/GUIPreProc.cpp: In member function 'bool CGUIPreProc::save(char*, int32_t)': guilib/GUIPreProc.cpp:197: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIHMM.cpp.o guilib/GUIHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIFeatures.cpp.o guilib/GUIFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIMath.cpp.o guilib/GUIMath.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIStructure.cpp.o guilib/GUIStructure.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIPluginEstimate.cpp.o guilib/GUIPluginEstimate.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIKernel.cpp.o guilib/GUIKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUITime.cpp.o guilib/GUITime.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUILabels.cpp.o guilib/GUILabels.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIClassifier.cpp.o guilib/GUIClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o guilib/GUIDistance.cpp.o guilib/GUIDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LinearKernel.cpp.o kernel/LinearKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/KernelMachine.cpp.o kernel/KernelMachine.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/CustomKernel.cpp.o kernel/CustomKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/DiagKernel.cpp.o kernel/DiagKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SparsePolyKernel.cpp.o kernel/SparsePolyKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/Kernel.cpp.o kernel/Kernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/MatchWordStringKernel.cpp.o kernel/MatchWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/CommWordStringKernel.cpp.o kernel/CommWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SigmoidKernel.cpp.o kernel/SigmoidKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/FixedDegreeStringKernel.cpp.o kernel/FixedDegreeStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LocalityImprovedStringKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/GaussianShiftKernel.cpp.o kernel/GaussianShiftKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/HistogramWordStringKernel.cpp.o kernel/HistogramWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/Chi2Kernel.cpp.o kernel/Chi2Kernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/DistanceKernel.cpp.o kernel/DistanceKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SparseLinearKernel.cpp.o kernel/SparseLinearKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/ConstKernel.cpp.o kernel/ConstKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/PolyMatchWordStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/OligoKernel.cpp.o kernel/OligoKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/CommUlongStringKernel.cpp.o kernel/CommUlongStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LinearStringKernel.cpp.o kernel/LinearStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SparseGaussianKernel.cpp.o kernel/SparseGaussianKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/AUCKernel.cpp.o kernel/AUCKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LinearByteKernel.cpp.o kernel/LinearByteKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/PolyKernel.cpp.o kernel/PolyKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LinearWordKernel.cpp.o kernel/LinearWordKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/LocalAlignmentStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/PyramidChi2.cpp.o kernel/PyramidChi2.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/CombinedKernel.cpp.o kernel/CombinedKernel.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from kernel/CombinedKernel.cpp:14: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/GaussianKernel.cpp.o kernel/GaussianKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/SalzbergWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreeStringKernel.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from kernel/WeightedDegreeStringKernel.cpp:14: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/MindyGramKernel.cpp.o kernel/MindyGramKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from kernel/WeightedDegreePositionStringKernel.cpp:14: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShortRealKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o kernel/WeightedCommWordStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/CombinedFeatures.cpp.o features/CombinedFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/ShortRealFeatures.cpp.o features/ShortRealFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/Features.cpp.o features/Features.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/ByteFeatures.cpp.o features/ByteFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/Labels.cpp.o features/Labels.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/Alphabet.cpp.o features/Alphabet.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/MindyGramFeatures.cpp.o features/MindyGramFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/WordFeatures.cpp.o features/WordFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/IntFeatures.cpp.o features/IntFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/StringFeatures.cpp.o features/StringFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/FKFeatures.cpp.o features/FKFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/TOPFeatures.cpp.o features/TOPFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/RealFeatures.cpp.o features/RealFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/RealFileFeatures.cpp.o features/RealFileFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/CharFeatures.cpp.o features/CharFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o features/ShortFeatures.cpp.o features/ShortFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distributions/hmm/LinearHMM.cpp.o distributions/hmm/LinearHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distributions/hmm/GHMM.cpp.o distributions/hmm/GHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distributions/hmm/HMM.cpp.o distributions/hmm/HMM.cpp distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_likelihood_bin(FILE*)': distributions/hmm/HMM.cpp:4322: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_bin(FILE*)': distributions/hmm/HMM.cpp:4359: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4360: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4364: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4368: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4374: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4379: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4383: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4384: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4387: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4388: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4389: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4390: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4391: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4392: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4401: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4402: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4405: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4410: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4419: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4420: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4421: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4430: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4431: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4432: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4438: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4439: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4442: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4443: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4444: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4445: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4446: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4447: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_path_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4531: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4534: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4537: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4541: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4545: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4554: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4557: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4560: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4566: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4573: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4640: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4644: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4647: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4652: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4656: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4667: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4670: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4673: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4680: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4687: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distributions/histogram/Histogram.cpp.o distributions/histogram/Histogram.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o distributions/Distribution.cpp.o distributions/Distribution.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/MatlabInterface.cpp.o interface/MatlabInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/RInterface.cpp.o interface/RInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/SGInterface.cpp.o interface/SGInterface.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from interface/SGInterface.cpp:9: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/PythonInterface.cpp.o interface/PythonInterface.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from interface/PythonInterface.cpp:7: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' interface/PythonInterface.cpp: In member function 'virtual void CPythonInterface::set_int(int32_t)': interface/PythonInterface.cpp:386: warning: deprecated conversion from string constant to 'char*' interface/PythonInterface.cpp: In member function 'virtual void CPythonInterface::set_real(float64_t)': interface/PythonInterface.cpp:395: warning: deprecated conversion from string constant to 'char*' interface/PythonInterface.cpp: In member function 'virtual void CPythonInterface::set_bool(bool)': interface/PythonInterface.cpp:405: warning: deprecated conversion from string constant to 'char*' c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/OctaveInterface.cpp.o interface/OctaveInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o interface/CmdLineInterface.cpp.o interface/CmdLineInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/LogPlusOne.cpp.o preproc/LogPlusOne.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/NormDerivativeLem3.cpp.o preproc/NormDerivativeLem3.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/NormOne.cpp.o preproc/NormOne.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/PruneVarSubMean.cpp.o preproc/PruneVarSubMean.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/PCACut.cpp.o preproc/PCACut.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/PreProc.cpp.o preproc/PreProc.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/SortWordString.cpp.o preproc/SortWordString.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o preproc/SortUlongString.cpp.o preproc/SortUlongString.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/MultiClassSVM.cpp.o classifier/svm/MultiClassSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/GNPPSVM.cpp.o classifier/svm/GNPPSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SubGradientSVM.cpp.o classifier/svm/SubGradientSVM.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from classifier/svm/SubGradientSVM.cpp:14: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/gnpplib.cpp.o classifier/svm/gnpplib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVM.cpp.o classifier/svm/SVM.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from classifier/svm/SVM.cpp:13: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVM_linear.cpp.o classifier/svm/SVM_linear.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVMLin.cpp.o classifier/svm/SVMLin.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/libocas.cpp.o classifier/svm/libocas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/ssl.cpp.o classifier/svm/ssl.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/LibLinear.cpp.o classifier/svm/LibLinear.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVM_libsvm.cpp.o classifier/svm/SVM_libsvm.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/qpbsvmlib.cpp.o classifier/svm/qpbsvmlib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpdtsolve.cpp In file included from /usr/include/python2.4/numpy/ndarrayobject.h:1828, from /usr/include/python2.4/numpy/arrayobject.h:14, from ./lib/python.h:10, from ./lib/Signal.h:21, from classifier/svm/gpdtsolve.cpp:80: /usr/include/python2.4/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.4/numpy/__multiarray_api.h:960: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h:963: warning: deprecated conversion from string constant to 'char*' /usr/include/python2.4/numpy/__multiarray_api.h: At global scope: /usr/include/python2.4/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/WDSVMOcas.cpp.o classifier/svm/WDSVMOcas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/GMNPSVM.cpp.o classifier/svm/GMNPSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/gmnplib.cpp.o classifier/svm/gmnplib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/gpm.cpp.o classifier/svm/gpm.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/MPDSVM.cpp.o classifier/svm/MPDSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVMOcas.cpp.o classifier/svm/SVMOcas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/Tron.cpp.o classifier/svm/Tron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/CPLEXSVM.cpp.o classifier/svm/CPLEXSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/qpssvmlib.cpp.o classifier/svm/qpssvmlib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/pr_loqo.cpp.o classifier/svm/pr_loqo.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/SVMSGD.cpp.o classifier/svm/SVMSGD.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/gpdt.cpp.o classifier/svm/gpdt.cpp classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadGPDTBinary(char*)': classifier/svm/gpdt.cpp:220: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:227: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:228: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:235: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:236: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:242: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:243: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadSVMFile(char*)': classifier/svm/gpdt.cpp:296: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:347: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/LibSVMMultiClass.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/LibSVMOneClass.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/svm/GPBTSVM.cpp.o classifier/svm/GPBTSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/LDA.cpp.o classifier/LDA.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/KNN.cpp.o classifier/KNN.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/Perceptron.cpp.o classifier/Perceptron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/PluginEstimate.cpp.o classifier/PluginEstimate.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/LPM.cpp.o classifier/LPM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/SparseLinearClassifier.cpp.o classifier/SparseLinearClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/Classifier.cpp.o classifier/Classifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/LPBoost.cpp.o classifier/LPBoost.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/LinearClassifier.cpp.o classifier/LinearClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/KernelPerceptron.cpp.o classifier/KernelPerceptron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.4 -I/usr/lib/python2.4/site-packages/numpy/core/include -I. -o classifier/SubGradientLPM.cpp.o classifier/SubGradientLPM.cpp c++ ./lib/File.cpp.o ./lib/memory.cpp.o ./lib/lapack.cpp.o ./lib/Cplex.cpp.o ./lib/Mathematics.cpp.o ./lib/Time.cpp.o ./lib/io.cpp.o ./lib/Trie.cpp.o ./lib/Signal.cpp.o ./lib/ShogunException.cpp.o ./base/Version.cpp.o ./base/SGObject.cpp.o ./base/Parallel.cpp.o ./clustering/Hierarchical.cpp.o ./clustering/KMeans.cpp.o ./regression/svr/LibSVR.cpp.o ./regression/KRR.cpp.o ./evaluation/PerformanceMeasures.cpp.o ./structure/Plif.cpp.o ./structure/DynProg.cpp.o ./structure/PlifArray.cpp.o ./distance/BrayCurtisDistance.cpp.o ./distance/EuclidianDistance.cpp.o ./distance/CanberraMetric.cpp.o ./distance/ChebyshewMetric.cpp.o ./distance/JensenMetric.cpp.o ./distance/GeodesicMetric.cpp.o ./distance/CanberraWordDistance.cpp.o ./distance/ManhattanMetric.cpp.o ./distance/SparseEuclidianDistance.cpp.o ./distance/ChiSquareDistance.cpp.o ./distance/TanimotoDistance.cpp.o ./distance/HammingWordDistance.cpp.o ./distance/MinkowskiMetric.cpp.o ./distance/ManhattanWordDistance.cpp.o ./distance/Distance.cpp.o ./distance/CosineDistance.cpp.o ./distance/DistanceMachine.cpp.o ./guilib/GUIPreProc.cpp.o ./guilib/GUIHMM.cpp.o ./guilib/GUIFeatures.cpp.o ./guilib/GUIMath.cpp.o ./guilib/GUIStructure.cpp.o ./guilib/GUIPluginEstimate.cpp.o ./guilib/GUIKernel.cpp.o ./guilib/GUITime.cpp.o ./guilib/GUILabels.cpp.o ./guilib/GUIClassifier.cpp.o ./guilib/GUIDistance.cpp.o ./kernel/LinearKernel.cpp.o ./kernel/KernelMachine.cpp.o ./kernel/CustomKernel.cpp.o ./kernel/DiagKernel.cpp.o ./kernel/SparsePolyKernel.cpp.o ./kernel/PolyMatchStringKernel.cpp.o ./kernel/Kernel.cpp.o ./kernel/MatchWordStringKernel.cpp.o ./kernel/CommWordStringKernel.cpp.o ./kernel/SigmoidKernel.cpp.o ./kernel/FixedDegreeStringKernel.cpp.o ./kernel/LocalityImprovedStringKernel.cpp.o ./kernel/GaussianShiftKernel.cpp.o ./kernel/HistogramWordStringKernel.cpp.o ./kernel/Chi2Kernel.cpp.o ./kernel/SimpleLocalityImprovedStringKernel.cpp.o ./kernel/DistanceKernel.cpp.o ./kernel/SparseLinearKernel.cpp.o ./kernel/ConstKernel.cpp.o ./kernel/PolyMatchWordStringKernel.cpp.o ./kernel/OligoKernel.cpp.o ./kernel/CommUlongStringKernel.cpp.o ./kernel/LinearStringKernel.cpp.o ./kernel/SparseGaussianKernel.cpp.o ./kernel/AUCKernel.cpp.o ./kernel/LinearByteKernel.cpp.o ./kernel/PolyKernel.cpp.o ./kernel/LinearWordKernel.cpp.o ./kernel/LocalAlignmentStringKernel.cpp.o ./kernel/PyramidChi2.cpp.o ./kernel/CombinedKernel.cpp.o ./kernel/GaussianKernel.cpp.o ./kernel/SalzbergWordStringKernel.cpp.o ./kernel/WeightedDegreeStringKernel.cpp.o ./kernel/MindyGramKernel.cpp.o ./kernel/WeightedDegreePositionStringKernel.cpp.o ./kernel/GaussianShortRealKernel.cpp.o ./kernel/WeightedCommWordStringKernel.cpp.o ./features/CombinedFeatures.cpp.o ./features/ShortRealFeatures.cpp.o ./features/Features.cpp.o ./features/ByteFeatures.cpp.o ./features/Labels.cpp.o ./features/Alphabet.cpp.o ./features/MindyGramFeatures.cpp.o ./features/WordFeatures.cpp.o ./features/IntFeatures.cpp.o ./features/StringFeatures.cpp.o ./features/FKFeatures.cpp.o ./features/TOPFeatures.cpp.o ./features/RealFeatures.cpp.o ./features/RealFileFeatures.cpp.o ./features/CharFeatures.cpp.o ./features/ShortFeatures.cpp.o ./distributions/hmm/LinearHMM.cpp.o ./distributions/hmm/GHMM.cpp.o ./distributions/hmm/HMM.cpp.o ./distributions/histogram/Histogram.cpp.o ./distributions/Distribution.cpp.o ./interface/MatlabInterface.cpp.o ./interface/RInterface.cpp.o ./interface/SGInterface.cpp.o ./interface/PythonInterface.cpp.o ./interface/OctaveInterface.cpp.o ./interface/CmdLineInterface.cpp.o ./preproc/LogPlusOne.cpp.o ./preproc/NormDerivativeLem3.cpp.o ./preproc/NormOne.cpp.o ./preproc/PruneVarSubMean.cpp.o ./preproc/PCACut.cpp.o ./preproc/PreProc.cpp.o ./preproc/SortWordString.cpp.o ./preproc/SortUlongString.cpp.o ./classifier/svm/MultiClassSVM.cpp.o ./classifier/svm/GNPPSVM.cpp.o ./classifier/svm/SubGradientSVM.cpp.o ./classifier/svm/gnpplib.cpp.o ./classifier/svm/SVM.cpp.o ./classifier/svm/SVM_linear.cpp.o ./classifier/svm/SVMLin.cpp.o ./classifier/svm/libocas.cpp.o ./classifier/svm/ssl.cpp.o ./classifier/svm/LibLinear.cpp.o ./classifier/svm/SVM_libsvm.cpp.o ./classifier/svm/qpbsvmlib.cpp.o ./classifier/svm/gpdtsolve.cpp.o ./classifier/svm/WDSVMOcas.cpp.o ./classifier/svm/GMNPSVM.cpp.o ./classifier/svm/gmnplib.cpp.o ./classifier/svm/gpm.cpp.o ./classifier/svm/MPDSVM.cpp.o ./classifier/svm/SVMOcas.cpp.o ./classifier/svm/Tron.cpp.o ./classifier/svm/CPLEXSVM.cpp.o ./classifier/svm/qpssvmlib.cpp.o ./classifier/svm/pr_loqo.cpp.o ./classifier/svm/SVMSGD.cpp.o ./classifier/svm/gpdt.cpp.o ./classifier/svm/LibSVM.cpp.o ./classifier/svm/LibSVMMultiClass.cpp.o ./classifier/svm/LibSVMOneClass.cpp.o ./classifier/svm/GPBTSVM.cpp.o ./classifier/LDA.cpp.o ./classifier/KNN.cpp.o ./classifier/Perceptron.cpp.o ./classifier/PluginEstimate.cpp.o ./classifier/LPM.cpp.o ./classifier/SparseLinearClassifier.cpp.o ./classifier/Classifier.cpp.o ./classifier/LPBoost.cpp.o ./classifier/LinearClassifier.cpp.o ./classifier/KernelPerceptron.cpp.o ./classifier/SubGradientLPM.cpp.o -shared -lpython2.4 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o sg.so -shared -lpython2.4 #removeconfighunk ============================================================ ==== Done. Start with shogun. ============================================================ make[2]: Leaving directory `/build/buildd/shogun-0.6.7/build-python2.4' make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python2.4' + /usr/bin/make -C build-python2.5 make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python2.5' ================================= ==== Generating dependencies ==== ================================= find . -mindepth 2 -name "*.c" -o -name "*.cpp" \ -exec gcc -MM -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_PYTHON -DHAVE_LARGEFILE -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. {} -MT {}.o \; >.depend find . -mindepth 2 -name "*.i" -o \ -name "*.h" -o -name "*.cpp" -o -name "*.cpp" | \ cut -c 3- | \ python2.5 .generate_link_dependencies.py "_" "so" >>.depend test -f .depend && make make[2]: Entering directory `/build/buildd/shogun-0.6.7/build-python2.5' ======================================================================================== ==== Building shogun for platform Linux-ppc target sg.so ==== opts: -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread ======================================================================================== c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/File.cpp.o lib/File.cpp lib/File.cpp: In member function 'bool CFile::write_char_valued_strings(const T_STRING*, int32_t)': lib/File.cpp:646: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/memory.cpp.o lib/memory.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/lapack.cpp.o lib/lapack.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/Cplex.cpp.o lib/Cplex.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/Mathematics.cpp.o lib/Mathematics.cpp lib/Mathematics.cpp: In static member function 'static int32_t CMath::calcroc(float64_t*, float64_t*, float64_t*, int32_t*, int32_t&, int32_t&, int32_t&, float64_t&, FILE*)': lib/Mathematics.cpp:345: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:346: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:347: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/Time.cpp.o lib/Time.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/io.cpp.o lib/io.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/Trie.cpp.o lib/Trie.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/Signal.cpp.o lib/Signal.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o lib/ShogunException.cpp.o lib/ShogunException.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o base/Version.cpp.o base/Version.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o base/SGObject.cpp.o base/SGObject.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o base/Parallel.cpp.o base/Parallel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o clustering/Hierarchical.cpp.o clustering/Hierarchical.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o clustering/KMeans.cpp.o clustering/KMeans.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o regression/svr/LibSVR.cpp.o regression/svr/LibSVR.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o regression/KRR.cpp.o regression/KRR.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o evaluation/PerformanceMeasures.cpp.o evaluation/PerformanceMeasures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o structure/Plif.cpp.o structure/Plif.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o structure/DynProg.cpp.o structure/DynProg.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o structure/PlifArray.cpp.o structure/PlifArray.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/BrayCurtisDistance.cpp.o distance/BrayCurtisDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/EuclidianDistance.cpp.o distance/EuclidianDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/CanberraMetric.cpp.o distance/CanberraMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/ChebyshewMetric.cpp.o distance/ChebyshewMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/JensenMetric.cpp.o distance/JensenMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/GeodesicMetric.cpp.o distance/GeodesicMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/CanberraWordDistance.cpp.o distance/CanberraWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/ManhattanMetric.cpp.o distance/ManhattanMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/SparseEuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/ChiSquareDistance.cpp.o distance/ChiSquareDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/TanimotoDistance.cpp.o distance/TanimotoDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/HammingWordDistance.cpp.o distance/HammingWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/MinkowskiMetric.cpp.o distance/MinkowskiMetric.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/ManhattanWordDistance.cpp.o distance/ManhattanWordDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/Distance.cpp.o distance/Distance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/CosineDistance.cpp.o distance/CosineDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distance/DistanceMachine.cpp.o distance/DistanceMachine.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIPreProc.cpp.o guilib/GUIPreProc.cpp guilib/GUIPreProc.cpp: In member function 'bool CGUIPreProc::save(char*, int32_t)': guilib/GUIPreProc.cpp:197: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIHMM.cpp.o guilib/GUIHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIFeatures.cpp.o guilib/GUIFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIMath.cpp.o guilib/GUIMath.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIStructure.cpp.o guilib/GUIStructure.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIPluginEstimate.cpp.o guilib/GUIPluginEstimate.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIKernel.cpp.o guilib/GUIKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUITime.cpp.o guilib/GUITime.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUILabels.cpp.o guilib/GUILabels.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIClassifier.cpp.o guilib/GUIClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o guilib/GUIDistance.cpp.o guilib/GUIDistance.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LinearKernel.cpp.o kernel/LinearKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/KernelMachine.cpp.o kernel/KernelMachine.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/CustomKernel.cpp.o kernel/CustomKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/DiagKernel.cpp.o kernel/DiagKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SparsePolyKernel.cpp.o kernel/SparsePolyKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/Kernel.cpp.o kernel/Kernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/MatchWordStringKernel.cpp.o kernel/MatchWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/CommWordStringKernel.cpp.o kernel/CommWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SigmoidKernel.cpp.o kernel/SigmoidKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/FixedDegreeStringKernel.cpp.o kernel/FixedDegreeStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LocalityImprovedStringKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/GaussianShiftKernel.cpp.o kernel/GaussianShiftKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/HistogramWordStringKernel.cpp.o kernel/HistogramWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/Chi2Kernel.cpp.o kernel/Chi2Kernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/DistanceKernel.cpp.o kernel/DistanceKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SparseLinearKernel.cpp.o kernel/SparseLinearKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/ConstKernel.cpp.o kernel/ConstKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/PolyMatchWordStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/OligoKernel.cpp.o kernel/OligoKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/CommUlongStringKernel.cpp.o kernel/CommUlongStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LinearStringKernel.cpp.o kernel/LinearStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SparseGaussianKernel.cpp.o kernel/SparseGaussianKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/AUCKernel.cpp.o kernel/AUCKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LinearByteKernel.cpp.o kernel/LinearByteKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/PolyKernel.cpp.o kernel/PolyKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LinearWordKernel.cpp.o kernel/LinearWordKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/LocalAlignmentStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/PyramidChi2.cpp.o kernel/PyramidChi2.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/CombinedKernel.cpp.o kernel/CombinedKernel.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/GaussianKernel.cpp.o kernel/GaussianKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/SalzbergWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreeStringKernel.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/MindyGramKernel.cpp.o kernel/MindyGramKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShortRealKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o kernel/WeightedCommWordStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/CombinedFeatures.cpp.o features/CombinedFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/ShortRealFeatures.cpp.o features/ShortRealFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/Features.cpp.o features/Features.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/ByteFeatures.cpp.o features/ByteFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/Labels.cpp.o features/Labels.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/Alphabet.cpp.o features/Alphabet.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/MindyGramFeatures.cpp.o features/MindyGramFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/WordFeatures.cpp.o features/WordFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/IntFeatures.cpp.o features/IntFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/StringFeatures.cpp.o features/StringFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/FKFeatures.cpp.o features/FKFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/TOPFeatures.cpp.o features/TOPFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/RealFeatures.cpp.o features/RealFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/RealFileFeatures.cpp.o features/RealFileFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/CharFeatures.cpp.o features/CharFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o features/ShortFeatures.cpp.o features/ShortFeatures.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distributions/hmm/LinearHMM.cpp.o distributions/hmm/LinearHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distributions/hmm/GHMM.cpp.o distributions/hmm/GHMM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distributions/hmm/HMM.cpp.o distributions/hmm/HMM.cpp distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_likelihood_bin(FILE*)': distributions/hmm/HMM.cpp:4322: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_bin(FILE*)': distributions/hmm/HMM.cpp:4359: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4360: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4364: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4368: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4374: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4379: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4383: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4384: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4387: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4388: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4389: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4390: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4391: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4392: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4401: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4402: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4405: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4410: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4419: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4420: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4421: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4430: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4431: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4432: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4438: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4439: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4442: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4443: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4444: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4445: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4446: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4447: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_path_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4531: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4534: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4537: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4541: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4545: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4554: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4557: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4560: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4566: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4573: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4640: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4644: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4647: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4652: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4656: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4667: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4670: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4673: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4680: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4687: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distributions/histogram/Histogram.cpp.o distributions/histogram/Histogram.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o distributions/Distribution.cpp.o distributions/Distribution.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/MatlabInterface.cpp.o interface/MatlabInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/RInterface.cpp.o interface/RInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/SGInterface.cpp.o interface/SGInterface.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/PythonInterface.cpp.o interface/PythonInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/OctaveInterface.cpp.o interface/OctaveInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o interface/CmdLineInterface.cpp.o interface/CmdLineInterface.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/LogPlusOne.cpp.o preproc/LogPlusOne.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/NormDerivativeLem3.cpp.o preproc/NormDerivativeLem3.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/NormOne.cpp.o preproc/NormOne.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/PruneVarSubMean.cpp.o preproc/PruneVarSubMean.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/PCACut.cpp.o preproc/PCACut.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/PreProc.cpp.o preproc/PreProc.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/SortWordString.cpp.o preproc/SortWordString.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o preproc/SortUlongString.cpp.o preproc/SortUlongString.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/MultiClassSVM.cpp.o classifier/svm/MultiClassSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/GNPPSVM.cpp.o classifier/svm/GNPPSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SubGradientSVM.cpp.o classifier/svm/SubGradientSVM.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/gnpplib.cpp.o classifier/svm/gnpplib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVM.cpp.o classifier/svm/SVM.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVM_linear.cpp.o classifier/svm/SVM_linear.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVMLin.cpp.o classifier/svm/SVMLin.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/libocas.cpp.o classifier/svm/libocas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/ssl.cpp.o classifier/svm/ssl.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/LibLinear.cpp.o classifier/svm/LibLinear.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVM_libsvm.cpp.o classifier/svm/SVM_libsvm.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/qpbsvmlib.cpp.o classifier/svm/qpbsvmlib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpdtsolve.cpp /usr/include/python2.5/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/WDSVMOcas.cpp.o classifier/svm/WDSVMOcas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/GMNPSVM.cpp.o classifier/svm/GMNPSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/gmnplib.cpp.o classifier/svm/gmnplib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/gpm.cpp.o classifier/svm/gpm.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/MPDSVM.cpp.o classifier/svm/MPDSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVMOcas.cpp.o classifier/svm/SVMOcas.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/Tron.cpp.o classifier/svm/Tron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/CPLEXSVM.cpp.o classifier/svm/CPLEXSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/qpssvmlib.cpp.o classifier/svm/qpssvmlib.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/pr_loqo.cpp.o classifier/svm/pr_loqo.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/SVMSGD.cpp.o classifier/svm/SVMSGD.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/gpdt.cpp.o classifier/svm/gpdt.cpp classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadGPDTBinary(char*)': classifier/svm/gpdt.cpp:220: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:227: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:228: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:235: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:236: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:242: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:243: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadSVMFile(char*)': classifier/svm/gpdt.cpp:296: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:347: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/LibSVMMultiClass.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/LibSVMOneClass.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/svm/GPBTSVM.cpp.o classifier/svm/GPBTSVM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/LDA.cpp.o classifier/LDA.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/KNN.cpp.o classifier/KNN.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/Perceptron.cpp.o classifier/Perceptron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/PluginEstimate.cpp.o classifier/PluginEstimate.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/LPM.cpp.o classifier/LPM.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/SparseLinearClassifier.cpp.o classifier/SparseLinearClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/Classifier.cpp.o classifier/Classifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/LPBoost.cpp.o classifier/LPBoost.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/LinearClassifier.cpp.o classifier/LinearClassifier.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/KernelPerceptron.cpp.o classifier/KernelPerceptron.cpp c++ -fno-strict-aliasing -fPIC -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I/usr/include/python2.5 -I/usr/lib/python2.5/site-packages/numpy/core/include -I. -o classifier/SubGradientLPM.cpp.o classifier/SubGradientLPM.cpp c++ ./lib/File.cpp.o ./lib/memory.cpp.o ./lib/lapack.cpp.o ./lib/Cplex.cpp.o ./lib/Mathematics.cpp.o ./lib/Time.cpp.o ./lib/io.cpp.o ./lib/Trie.cpp.o ./lib/Signal.cpp.o ./lib/ShogunException.cpp.o ./base/Version.cpp.o ./base/SGObject.cpp.o ./base/Parallel.cpp.o ./clustering/Hierarchical.cpp.o ./clustering/KMeans.cpp.o ./regression/svr/LibSVR.cpp.o ./regression/KRR.cpp.o ./evaluation/PerformanceMeasures.cpp.o ./structure/Plif.cpp.o ./structure/DynProg.cpp.o ./structure/PlifArray.cpp.o ./distance/BrayCurtisDistance.cpp.o ./distance/EuclidianDistance.cpp.o ./distance/CanberraMetric.cpp.o ./distance/ChebyshewMetric.cpp.o ./distance/JensenMetric.cpp.o ./distance/GeodesicMetric.cpp.o ./distance/CanberraWordDistance.cpp.o ./distance/ManhattanMetric.cpp.o ./distance/SparseEuclidianDistance.cpp.o ./distance/ChiSquareDistance.cpp.o ./distance/TanimotoDistance.cpp.o ./distance/HammingWordDistance.cpp.o ./distance/MinkowskiMetric.cpp.o ./distance/ManhattanWordDistance.cpp.o ./distance/Distance.cpp.o ./distance/CosineDistance.cpp.o ./distance/DistanceMachine.cpp.o ./guilib/GUIPreProc.cpp.o ./guilib/GUIHMM.cpp.o ./guilib/GUIFeatures.cpp.o ./guilib/GUIMath.cpp.o ./guilib/GUIStructure.cpp.o ./guilib/GUIPluginEstimate.cpp.o ./guilib/GUIKernel.cpp.o ./guilib/GUITime.cpp.o ./guilib/GUILabels.cpp.o ./guilib/GUIClassifier.cpp.o ./guilib/GUIDistance.cpp.o ./kernel/LinearKernel.cpp.o ./kernel/KernelMachine.cpp.o ./kernel/CustomKernel.cpp.o ./kernel/DiagKernel.cpp.o ./kernel/SparsePolyKernel.cpp.o ./kernel/PolyMatchStringKernel.cpp.o ./kernel/Kernel.cpp.o ./kernel/MatchWordStringKernel.cpp.o ./kernel/CommWordStringKernel.cpp.o ./kernel/SigmoidKernel.cpp.o ./kernel/FixedDegreeStringKernel.cpp.o ./kernel/LocalityImprovedStringKernel.cpp.o ./kernel/GaussianShiftKernel.cpp.o ./kernel/HistogramWordStringKernel.cpp.o ./kernel/Chi2Kernel.cpp.o ./kernel/SimpleLocalityImprovedStringKernel.cpp.o ./kernel/DistanceKernel.cpp.o ./kernel/SparseLinearKernel.cpp.o ./kernel/ConstKernel.cpp.o ./kernel/PolyMatchWordStringKernel.cpp.o ./kernel/OligoKernel.cpp.o ./kernel/CommUlongStringKernel.cpp.o ./kernel/LinearStringKernel.cpp.o ./kernel/SparseGaussianKernel.cpp.o ./kernel/AUCKernel.cpp.o ./kernel/LinearByteKernel.cpp.o ./kernel/PolyKernel.cpp.o ./kernel/LinearWordKernel.cpp.o ./kernel/LocalAlignmentStringKernel.cpp.o ./kernel/PyramidChi2.cpp.o ./kernel/CombinedKernel.cpp.o ./kernel/GaussianKernel.cpp.o ./kernel/SalzbergWordStringKernel.cpp.o ./kernel/WeightedDegreeStringKernel.cpp.o ./kernel/MindyGramKernel.cpp.o ./kernel/WeightedDegreePositionStringKernel.cpp.o ./kernel/GaussianShortRealKernel.cpp.o ./kernel/WeightedCommWordStringKernel.cpp.o ./features/CombinedFeatures.cpp.o ./features/ShortRealFeatures.cpp.o ./features/Features.cpp.o ./features/ByteFeatures.cpp.o ./features/Labels.cpp.o ./features/Alphabet.cpp.o ./features/MindyGramFeatures.cpp.o ./features/WordFeatures.cpp.o ./features/IntFeatures.cpp.o ./features/StringFeatures.cpp.o ./features/FKFeatures.cpp.o ./features/TOPFeatures.cpp.o ./features/RealFeatures.cpp.o ./features/RealFileFeatures.cpp.o ./features/CharFeatures.cpp.o ./features/ShortFeatures.cpp.o ./distributions/hmm/LinearHMM.cpp.o ./distributions/hmm/GHMM.cpp.o ./distributions/hmm/HMM.cpp.o ./distributions/histogram/Histogram.cpp.o ./distributions/Distribution.cpp.o ./interface/MatlabInterface.cpp.o ./interface/RInterface.cpp.o ./interface/SGInterface.cpp.o ./interface/PythonInterface.cpp.o ./interface/OctaveInterface.cpp.o ./interface/CmdLineInterface.cpp.o ./preproc/LogPlusOne.cpp.o ./preproc/NormDerivativeLem3.cpp.o ./preproc/NormOne.cpp.o ./preproc/PruneVarSubMean.cpp.o ./preproc/PCACut.cpp.o ./preproc/PreProc.cpp.o ./preproc/SortWordString.cpp.o ./preproc/SortUlongString.cpp.o ./classifier/svm/MultiClassSVM.cpp.o ./classifier/svm/GNPPSVM.cpp.o ./classifier/svm/SubGradientSVM.cpp.o ./classifier/svm/gnpplib.cpp.o ./classifier/svm/SVM.cpp.o ./classifier/svm/SVM_linear.cpp.o ./classifier/svm/SVMLin.cpp.o ./classifier/svm/libocas.cpp.o ./classifier/svm/ssl.cpp.o ./classifier/svm/LibLinear.cpp.o ./classifier/svm/SVM_libsvm.cpp.o ./classifier/svm/qpbsvmlib.cpp.o ./classifier/svm/gpdtsolve.cpp.o ./classifier/svm/WDSVMOcas.cpp.o ./classifier/svm/GMNPSVM.cpp.o ./classifier/svm/gmnplib.cpp.o ./classifier/svm/gpm.cpp.o ./classifier/svm/MPDSVM.cpp.o ./classifier/svm/SVMOcas.cpp.o ./classifier/svm/Tron.cpp.o ./classifier/svm/CPLEXSVM.cpp.o ./classifier/svm/qpssvmlib.cpp.o ./classifier/svm/pr_loqo.cpp.o ./classifier/svm/SVMSGD.cpp.o ./classifier/svm/gpdt.cpp.o ./classifier/svm/LibSVM.cpp.o ./classifier/svm/LibSVMMultiClass.cpp.o ./classifier/svm/LibSVMOneClass.cpp.o ./classifier/svm/GPBTSVM.cpp.o ./classifier/LDA.cpp.o ./classifier/KNN.cpp.o ./classifier/Perceptron.cpp.o ./classifier/PluginEstimate.cpp.o ./classifier/LPM.cpp.o ./classifier/SparseLinearClassifier.cpp.o ./classifier/Classifier.cpp.o ./classifier/LPBoost.cpp.o ./classifier/LinearClassifier.cpp.o ./classifier/KernelPerceptron.cpp.o ./classifier/SubGradientLPM.cpp.o -shared -lpython2.5 -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o sg.so -shared -lpython2.5 #removeconfighunk ============================================================ ==== Done. Start with shogun. ============================================================ make[2]: Leaving directory `/build/buildd/shogun-0.6.7/build-python2.5' make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python2.5' touch debian/stamp-build-python /usr/bin/make -C build-readline make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-readline' ================================= ==== Generating dependencies ==== ================================= find . -mindepth 2 -name "*.c" -o -name "*.cpp" \ -exec gcc -MM -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_READLINE -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_LARGEFILE -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL -DHAVE_CMDLINE -I. {} -MT {}.o \; >.depend find . -mindepth 2 -name "*.i" -o \ -name "*.h" -o -name "*.cpp" -o -name "*.cpp" | \ cut -c 3- | \ python .generate_link_dependencies.py "_" "so" >>.depend test -f .depend && make make[2]: Entering directory `/build/buildd/shogun-0.6.7/build-readline' ======================================================================================== ==== Building shogun for platform Linux-ppc target shogun ==== opts: -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread ======================================================================================== c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o lib/File.cpp.o lib/File.cpp lib/File.cpp: In member function 'bool CFile::write_char_valued_strings(const T_STRING*, int32_t)': lib/File.cpp:646: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o lib/memory.cpp.o lib/memory.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o lib/lapack.cpp.o lib/lapack.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o lib/Cplex.cpp.o lib/Cplex.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o lib/Mathematics.cpp.o lib/Mathematics.cpp lib/Mathematics.cpp: In static member function 'static int32_t CMath::calcroc(float64_t*, float64_t*, float64_t*, int32_t*, int32_t&, int32_t&, int32_t&, float64_t&, FILE*)': lib/Mathematics.cpp:345: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:346: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:347: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o lib/Time.cpp.o lib/Time.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o lib/io.cpp.o lib/io.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o lib/Trie.cpp.o lib/Trie.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o lib/Signal.cpp.o lib/Signal.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o lib/ShogunException.cpp.o lib/ShogunException.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o base/Version.cpp.o base/Version.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o base/SGObject.cpp.o base/SGObject.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o base/Parallel.cpp.o base/Parallel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o clustering/Hierarchical.cpp.o clustering/Hierarchical.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o clustering/KMeans.cpp.o clustering/KMeans.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o regression/svr/LibSVR.cpp.o regression/svr/LibSVR.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o regression/KRR.cpp.o regression/KRR.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o evaluation/PerformanceMeasures.cpp.o evaluation/PerformanceMeasures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o structure/Plif.cpp.o structure/Plif.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o structure/DynProg.cpp.o structure/DynProg.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o structure/PlifArray.cpp.o structure/PlifArray.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/BrayCurtisDistance.cpp.o distance/BrayCurtisDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/EuclidianDistance.cpp.o distance/EuclidianDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/CanberraMetric.cpp.o distance/CanberraMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/ChebyshewMetric.cpp.o distance/ChebyshewMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/JensenMetric.cpp.o distance/JensenMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/GeodesicMetric.cpp.o distance/GeodesicMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/CanberraWordDistance.cpp.o distance/CanberraWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/ManhattanMetric.cpp.o distance/ManhattanMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/SparseEuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/ChiSquareDistance.cpp.o distance/ChiSquareDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/TanimotoDistance.cpp.o distance/TanimotoDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/HammingWordDistance.cpp.o distance/HammingWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/MinkowskiMetric.cpp.o distance/MinkowskiMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/ManhattanWordDistance.cpp.o distance/ManhattanWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/Distance.cpp.o distance/Distance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/CosineDistance.cpp.o distance/CosineDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distance/DistanceMachine.cpp.o distance/DistanceMachine.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o guilib/GUIPreProc.cpp.o guilib/GUIPreProc.cpp guilib/GUIPreProc.cpp: In member function 'bool CGUIPreProc::save(char*, int32_t)': guilib/GUIPreProc.cpp:197: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o guilib/GUIHMM.cpp.o guilib/GUIHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o guilib/GUIFeatures.cpp.o guilib/GUIFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o guilib/GUIMath.cpp.o guilib/GUIMath.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o guilib/GUIStructure.cpp.o guilib/GUIStructure.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o guilib/GUIPluginEstimate.cpp.o guilib/GUIPluginEstimate.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o guilib/GUIKernel.cpp.o guilib/GUIKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o guilib/GUITime.cpp.o guilib/GUITime.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o guilib/GUILabels.cpp.o guilib/GUILabels.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o guilib/GUIClassifier.cpp.o guilib/GUIClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o guilib/GUIDistance.cpp.o guilib/GUIDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/LinearKernel.cpp.o kernel/LinearKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/KernelMachine.cpp.o kernel/KernelMachine.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/CustomKernel.cpp.o kernel/CustomKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/DiagKernel.cpp.o kernel/DiagKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/SparsePolyKernel.cpp.o kernel/SparsePolyKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/Kernel.cpp.o kernel/Kernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/MatchWordStringKernel.cpp.o kernel/MatchWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/CommWordStringKernel.cpp.o kernel/CommWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/SigmoidKernel.cpp.o kernel/SigmoidKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/FixedDegreeStringKernel.cpp.o kernel/FixedDegreeStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/LocalityImprovedStringKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/GaussianShiftKernel.cpp.o kernel/GaussianShiftKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/HistogramWordStringKernel.cpp.o kernel/HistogramWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/Chi2Kernel.cpp.o kernel/Chi2Kernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/DistanceKernel.cpp.o kernel/DistanceKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/SparseLinearKernel.cpp.o kernel/SparseLinearKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/ConstKernel.cpp.o kernel/ConstKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/PolyMatchWordStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/OligoKernel.cpp.o kernel/OligoKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/CommUlongStringKernel.cpp.o kernel/CommUlongStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/LinearStringKernel.cpp.o kernel/LinearStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/SparseGaussianKernel.cpp.o kernel/SparseGaussianKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/AUCKernel.cpp.o kernel/AUCKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/LinearByteKernel.cpp.o kernel/LinearByteKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/PolyKernel.cpp.o kernel/PolyKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/LinearWordKernel.cpp.o kernel/LinearWordKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/LocalAlignmentStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/PyramidChi2.cpp.o kernel/PyramidChi2.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/CombinedKernel.cpp.o kernel/CombinedKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/GaussianKernel.cpp.o kernel/GaussianKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/SalzbergWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreeStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/MindyGramKernel.cpp.o kernel/MindyGramKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShortRealKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o kernel/WeightedCommWordStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/CombinedFeatures.cpp.o features/CombinedFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/ShortRealFeatures.cpp.o features/ShortRealFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/Features.cpp.o features/Features.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/ByteFeatures.cpp.o features/ByteFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/Labels.cpp.o features/Labels.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/Alphabet.cpp.o features/Alphabet.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/MindyGramFeatures.cpp.o features/MindyGramFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/WordFeatures.cpp.o features/WordFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/IntFeatures.cpp.o features/IntFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/StringFeatures.cpp.o features/StringFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/FKFeatures.cpp.o features/FKFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/TOPFeatures.cpp.o features/TOPFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/RealFeatures.cpp.o features/RealFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/RealFileFeatures.cpp.o features/RealFileFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/CharFeatures.cpp.o features/CharFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o features/ShortFeatures.cpp.o features/ShortFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distributions/hmm/LinearHMM.cpp.o distributions/hmm/LinearHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distributions/hmm/GHMM.cpp.o distributions/hmm/GHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distributions/hmm/HMM.cpp.o distributions/hmm/HMM.cpp distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_likelihood_bin(FILE*)': distributions/hmm/HMM.cpp:4322: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_bin(FILE*)': distributions/hmm/HMM.cpp:4359: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4360: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4364: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4368: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4374: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4379: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4383: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4384: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4387: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4388: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4389: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4390: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4391: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4392: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4401: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4402: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4405: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4410: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4419: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4420: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4421: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4430: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4431: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4432: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4438: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4439: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4442: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4443: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4444: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4445: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4446: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4447: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_path_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4531: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4534: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4537: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4541: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4545: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4554: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4557: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4560: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4566: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4573: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4640: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4644: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4647: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4652: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4656: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4667: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4670: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4673: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4680: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4687: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distributions/histogram/Histogram.cpp.o distributions/histogram/Histogram.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o distributions/Distribution.cpp.o distributions/Distribution.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o interface/MatlabInterface.cpp.o interface/MatlabInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o interface/RInterface.cpp.o interface/RInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o interface/SGInterface.cpp.o interface/SGInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o interface/PythonInterface.cpp.o interface/PythonInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o interface/OctaveInterface.cpp.o interface/OctaveInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o interface/CmdLineInterface.cpp.o interface/CmdLineInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o preproc/LogPlusOne.cpp.o preproc/LogPlusOne.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o preproc/NormDerivativeLem3.cpp.o preproc/NormDerivativeLem3.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o preproc/NormOne.cpp.o preproc/NormOne.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o preproc/PruneVarSubMean.cpp.o preproc/PruneVarSubMean.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o preproc/PCACut.cpp.o preproc/PCACut.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o preproc/PreProc.cpp.o preproc/PreProc.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o preproc/SortWordString.cpp.o preproc/SortWordString.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o preproc/SortUlongString.cpp.o preproc/SortUlongString.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/MultiClassSVM.cpp.o classifier/svm/MultiClassSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/GNPPSVM.cpp.o classifier/svm/GNPPSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/SubGradientSVM.cpp.o classifier/svm/SubGradientSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/gnpplib.cpp.o classifier/svm/gnpplib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/SVM.cpp.o classifier/svm/SVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/SVM_linear.cpp.o classifier/svm/SVM_linear.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/SVMLin.cpp.o classifier/svm/SVMLin.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/libocas.cpp.o classifier/svm/libocas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/ssl.cpp.o classifier/svm/ssl.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/LibLinear.cpp.o classifier/svm/LibLinear.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/SVM_libsvm.cpp.o classifier/svm/SVM_libsvm.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/qpbsvmlib.cpp.o classifier/svm/qpbsvmlib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpdtsolve.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/WDSVMOcas.cpp.o classifier/svm/WDSVMOcas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/GMNPSVM.cpp.o classifier/svm/GMNPSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/gmnplib.cpp.o classifier/svm/gmnplib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/gpm.cpp.o classifier/svm/gpm.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/MPDSVM.cpp.o classifier/svm/MPDSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/SVMOcas.cpp.o classifier/svm/SVMOcas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/Tron.cpp.o classifier/svm/Tron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/CPLEXSVM.cpp.o classifier/svm/CPLEXSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/qpssvmlib.cpp.o classifier/svm/qpssvmlib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/pr_loqo.cpp.o classifier/svm/pr_loqo.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/SVMSGD.cpp.o classifier/svm/SVMSGD.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/gpdt.cpp.o classifier/svm/gpdt.cpp classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadGPDTBinary(char*)': classifier/svm/gpdt.cpp:220: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:227: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:228: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:235: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:236: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:242: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:243: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadSVMFile(char*)': classifier/svm/gpdt.cpp:296: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:347: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/LibSVMMultiClass.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/LibSVMOneClass.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/svm/GPBTSVM.cpp.o classifier/svm/GPBTSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/LDA.cpp.o classifier/LDA.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/KNN.cpp.o classifier/KNN.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/Perceptron.cpp.o classifier/Perceptron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/PluginEstimate.cpp.o classifier/PluginEstimate.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/LPM.cpp.o classifier/LPM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/SparseLinearClassifier.cpp.o classifier/SparseLinearClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/Classifier.cpp.o classifier/Classifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/LPBoost.cpp.o classifier/LPBoost.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/LinearClassifier.cpp.o classifier/LinearClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/KernelPerceptron.cpp.o classifier/KernelPerceptron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -c -I. -o classifier/SubGradientLPM.cpp.o classifier/SubGradientLPM.cpp c++ ./lib/File.cpp.o ./lib/memory.cpp.o ./lib/lapack.cpp.o ./lib/Cplex.cpp.o ./lib/Mathematics.cpp.o ./lib/Time.cpp.o ./lib/io.cpp.o ./lib/Trie.cpp.o ./lib/Signal.cpp.o ./lib/ShogunException.cpp.o ./base/Version.cpp.o ./base/SGObject.cpp.o ./base/Parallel.cpp.o ./clustering/Hierarchical.cpp.o ./clustering/KMeans.cpp.o ./regression/svr/LibSVR.cpp.o ./regression/KRR.cpp.o ./evaluation/PerformanceMeasures.cpp.o ./structure/Plif.cpp.o ./structure/DynProg.cpp.o ./structure/PlifArray.cpp.o ./distance/BrayCurtisDistance.cpp.o ./distance/EuclidianDistance.cpp.o ./distance/CanberraMetric.cpp.o ./distance/ChebyshewMetric.cpp.o ./distance/JensenMetric.cpp.o ./distance/GeodesicMetric.cpp.o ./distance/CanberraWordDistance.cpp.o ./distance/ManhattanMetric.cpp.o ./distance/SparseEuclidianDistance.cpp.o ./distance/ChiSquareDistance.cpp.o ./distance/TanimotoDistance.cpp.o ./distance/HammingWordDistance.cpp.o ./distance/MinkowskiMetric.cpp.o ./distance/ManhattanWordDistance.cpp.o ./distance/Distance.cpp.o ./distance/CosineDistance.cpp.o ./distance/DistanceMachine.cpp.o ./guilib/GUIPreProc.cpp.o ./guilib/GUIHMM.cpp.o ./guilib/GUIFeatures.cpp.o ./guilib/GUIMath.cpp.o ./guilib/GUIStructure.cpp.o ./guilib/GUIPluginEstimate.cpp.o ./guilib/GUIKernel.cpp.o ./guilib/GUITime.cpp.o ./guilib/GUILabels.cpp.o ./guilib/GUIClassifier.cpp.o ./guilib/GUIDistance.cpp.o ./kernel/LinearKernel.cpp.o ./kernel/KernelMachine.cpp.o ./kernel/CustomKernel.cpp.o ./kernel/DiagKernel.cpp.o ./kernel/SparsePolyKernel.cpp.o ./kernel/PolyMatchStringKernel.cpp.o ./kernel/Kernel.cpp.o ./kernel/MatchWordStringKernel.cpp.o ./kernel/CommWordStringKernel.cpp.o ./kernel/SigmoidKernel.cpp.o ./kernel/FixedDegreeStringKernel.cpp.o ./kernel/LocalityImprovedStringKernel.cpp.o ./kernel/GaussianShiftKernel.cpp.o ./kernel/HistogramWordStringKernel.cpp.o ./kernel/Chi2Kernel.cpp.o ./kernel/SimpleLocalityImprovedStringKernel.cpp.o ./kernel/DistanceKernel.cpp.o ./kernel/SparseLinearKernel.cpp.o ./kernel/ConstKernel.cpp.o ./kernel/PolyMatchWordStringKernel.cpp.o ./kernel/OligoKernel.cpp.o ./kernel/CommUlongStringKernel.cpp.o ./kernel/LinearStringKernel.cpp.o ./kernel/SparseGaussianKernel.cpp.o ./kernel/AUCKernel.cpp.o ./kernel/LinearByteKernel.cpp.o ./kernel/PolyKernel.cpp.o ./kernel/LinearWordKernel.cpp.o ./kernel/LocalAlignmentStringKernel.cpp.o ./kernel/PyramidChi2.cpp.o ./kernel/CombinedKernel.cpp.o ./kernel/GaussianKernel.cpp.o ./kernel/SalzbergWordStringKernel.cpp.o ./kernel/WeightedDegreeStringKernel.cpp.o ./kernel/MindyGramKernel.cpp.o ./kernel/WeightedDegreePositionStringKernel.cpp.o ./kernel/GaussianShortRealKernel.cpp.o ./kernel/WeightedCommWordStringKernel.cpp.o ./features/CombinedFeatures.cpp.o ./features/ShortRealFeatures.cpp.o ./features/Features.cpp.o ./features/ByteFeatures.cpp.o ./features/Labels.cpp.o ./features/Alphabet.cpp.o ./features/MindyGramFeatures.cpp.o ./features/WordFeatures.cpp.o ./features/IntFeatures.cpp.o ./features/StringFeatures.cpp.o ./features/FKFeatures.cpp.o ./features/TOPFeatures.cpp.o ./features/RealFeatures.cpp.o ./features/RealFileFeatures.cpp.o ./features/CharFeatures.cpp.o ./features/ShortFeatures.cpp.o ./distributions/hmm/LinearHMM.cpp.o ./distributions/hmm/GHMM.cpp.o ./distributions/hmm/HMM.cpp.o ./distributions/histogram/Histogram.cpp.o ./distributions/Distribution.cpp.o ./interface/MatlabInterface.cpp.o ./interface/RInterface.cpp.o ./interface/SGInterface.cpp.o ./interface/PythonInterface.cpp.o ./interface/OctaveInterface.cpp.o ./interface/CmdLineInterface.cpp.o ./preproc/LogPlusOne.cpp.o ./preproc/NormDerivativeLem3.cpp.o ./preproc/NormOne.cpp.o ./preproc/PruneVarSubMean.cpp.o ./preproc/PCACut.cpp.o ./preproc/PreProc.cpp.o ./preproc/SortWordString.cpp.o ./preproc/SortUlongString.cpp.o ./classifier/svm/MultiClassSVM.cpp.o ./classifier/svm/GNPPSVM.cpp.o ./classifier/svm/SubGradientSVM.cpp.o ./classifier/svm/gnpplib.cpp.o ./classifier/svm/SVM.cpp.o ./classifier/svm/SVM_linear.cpp.o ./classifier/svm/SVMLin.cpp.o ./classifier/svm/libocas.cpp.o ./classifier/svm/ssl.cpp.o ./classifier/svm/LibLinear.cpp.o ./classifier/svm/SVM_libsvm.cpp.o ./classifier/svm/qpbsvmlib.cpp.o ./classifier/svm/gpdtsolve.cpp.o ./classifier/svm/WDSVMOcas.cpp.o ./classifier/svm/GMNPSVM.cpp.o ./classifier/svm/gmnplib.cpp.o ./classifier/svm/gpm.cpp.o ./classifier/svm/MPDSVM.cpp.o ./classifier/svm/SVMOcas.cpp.o ./classifier/svm/Tron.cpp.o ./classifier/svm/CPLEXSVM.cpp.o ./classifier/svm/qpssvmlib.cpp.o ./classifier/svm/pr_loqo.cpp.o ./classifier/svm/SVMSGD.cpp.o ./classifier/svm/gpdt.cpp.o ./classifier/svm/LibSVM.cpp.o ./classifier/svm/LibSVMMultiClass.cpp.o ./classifier/svm/LibSVMOneClass.cpp.o ./classifier/svm/GPBTSVM.cpp.o ./classifier/LDA.cpp.o ./classifier/KNN.cpp.o ./classifier/Perceptron.cpp.o ./classifier/PluginEstimate.cpp.o ./classifier/LPM.cpp.o ./classifier/SparseLinearClassifier.cpp.o ./classifier/Classifier.cpp.o ./classifier/LPBoost.cpp.o ./classifier/LinearClassifier.cpp.o ./classifier/KernelPerceptron.cpp.o ./classifier/SubGradientLPM.cpp.o -Xlinker --no-undefined -lm -pthread -lreadline -llapack_atlas -llapack -lcblas -o shogun #removeconfighunk ============================================================ ==== Done. Start with shogun. ============================================================ make[2]: Leaving directory `/build/buildd/shogun-0.6.7/build-readline' make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-readline' touch debian/stamp-build-readline /usr/bin/make -C build-octave-modular make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-octave-modular' ================================= ==== Generating dependencies ==== ================================= find . -mindepth 2 -name "*.c" -o -name "*.cpp" \ -exec gcc -MM -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL -I. -I/usr/include/octave-3.0.1 -I/usr/include {} -MT {}.o \; >.depend find . -mindepth 2 -name "*.i" -o \ -name "*.h" -o -name "*.cpp" -o -name "*.cpp" | \ cut -c 3- | \ python .generate_link_dependencies.py "" "oct" >>.depend test -f .depend && make make[2]: Entering directory `/build/buildd/shogun-0.6.7/build-octave-modular' ======================================================================================== ==== Building shogun for platform Linux-ppc target swig ==== opts: -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC ======================================================================================== c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/File.cpp.o lib/File.cpp lib/File.cpp: In member function 'bool CFile::write_char_valued_strings(const T_STRING*, int32_t)': lib/File.cpp:646: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/memory.cpp.o lib/memory.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/lapack.cpp.o lib/lapack.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/Cplex.cpp.o lib/Cplex.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/Mathematics.cpp.o lib/Mathematics.cpp lib/Mathematics.cpp: In static member function 'static int32_t CMath::calcroc(float64_t*, float64_t*, float64_t*, int32_t*, int32_t&, int32_t&, int32_t&, float64_t&, FILE*)': lib/Mathematics.cpp:345: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:346: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:347: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/Time.cpp.o lib/Time.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/io.cpp.o lib/io.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/Trie.cpp.o lib/Trie.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/Signal.cpp.o lib/Signal.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/ShogunException.cpp.o lib/ShogunException.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o base/Version.cpp.o base/Version.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o base/SGObject.cpp.o base/SGObject.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o base/Parallel.cpp.o base/Parallel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o clustering/Hierarchical.cpp.o clustering/Hierarchical.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o clustering/KMeans.cpp.o clustering/KMeans.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o regression/svr/LibSVR.cpp.o regression/svr/LibSVR.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o regression/KRR.cpp.o regression/KRR.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o evaluation/PerformanceMeasures.cpp.o evaluation/PerformanceMeasures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o structure/Plif.cpp.o structure/Plif.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o structure/DynProg.cpp.o structure/DynProg.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o structure/PlifArray.cpp.o structure/PlifArray.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/BrayCurtisDistance.cpp.o distance/BrayCurtisDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/EuclidianDistance.cpp.o distance/EuclidianDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/CanberraMetric.cpp.o distance/CanberraMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/ChebyshewMetric.cpp.o distance/ChebyshewMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/JensenMetric.cpp.o distance/JensenMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/GeodesicMetric.cpp.o distance/GeodesicMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/CanberraWordDistance.cpp.o distance/CanberraWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/ManhattanMetric.cpp.o distance/ManhattanMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/SparseEuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/ChiSquareDistance.cpp.o distance/ChiSquareDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/TanimotoDistance.cpp.o distance/TanimotoDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/HammingWordDistance.cpp.o distance/HammingWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/MinkowskiMetric.cpp.o distance/MinkowskiMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/ManhattanWordDistance.cpp.o distance/ManhattanWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/Distance.cpp.o distance/Distance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/CosineDistance.cpp.o distance/CosineDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/DistanceMachine.cpp.o distance/DistanceMachine.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIPreProc.cpp.o guilib/GUIPreProc.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIHMM.cpp.o guilib/GUIHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIFeatures.cpp.o guilib/GUIFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIMath.cpp.o guilib/GUIMath.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIStructure.cpp.o guilib/GUIStructure.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIPluginEstimate.cpp.o guilib/GUIPluginEstimate.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIKernel.cpp.o guilib/GUIKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUITime.cpp.o guilib/GUITime.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUILabels.cpp.o guilib/GUILabels.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIClassifier.cpp.o guilib/GUIClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIDistance.cpp.o guilib/GUIDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LinearKernel.cpp.o kernel/LinearKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/KernelMachine.cpp.o kernel/KernelMachine.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/CustomKernel.cpp.o kernel/CustomKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/DiagKernel.cpp.o kernel/DiagKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SparsePolyKernel.cpp.o kernel/SparsePolyKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/Kernel.cpp.o kernel/Kernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/MatchWordStringKernel.cpp.o kernel/MatchWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/CommWordStringKernel.cpp.o kernel/CommWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SigmoidKernel.cpp.o kernel/SigmoidKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/FixedDegreeStringKernel.cpp.o kernel/FixedDegreeStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LocalityImprovedStringKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/GaussianShiftKernel.cpp.o kernel/GaussianShiftKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/HistogramWordStringKernel.cpp.o kernel/HistogramWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/Chi2Kernel.cpp.o kernel/Chi2Kernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/DistanceKernel.cpp.o kernel/DistanceKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SparseLinearKernel.cpp.o kernel/SparseLinearKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/ConstKernel.cpp.o kernel/ConstKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/PolyMatchWordStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/OligoKernel.cpp.o kernel/OligoKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/CommUlongStringKernel.cpp.o kernel/CommUlongStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LinearStringKernel.cpp.o kernel/LinearStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SparseGaussianKernel.cpp.o kernel/SparseGaussianKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/AUCKernel.cpp.o kernel/AUCKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LinearByteKernel.cpp.o kernel/LinearByteKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/PolyKernel.cpp.o kernel/PolyKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LinearWordKernel.cpp.o kernel/LinearWordKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LocalAlignmentStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/PyramidChi2.cpp.o kernel/PyramidChi2.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/CombinedKernel.cpp.o kernel/CombinedKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/GaussianKernel.cpp.o kernel/GaussianKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SalzbergWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreeStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/MindyGramKernel.cpp.o kernel/MindyGramKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShortRealKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/WeightedCommWordStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/CombinedFeatures.cpp.o features/CombinedFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/ShortRealFeatures.cpp.o features/ShortRealFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/Features.cpp.o features/Features.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/ByteFeatures.cpp.o features/ByteFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/Labels.cpp.o features/Labels.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/Alphabet.cpp.o features/Alphabet.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/MindyGramFeatures.cpp.o features/MindyGramFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/WordFeatures.cpp.o features/WordFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/IntFeatures.cpp.o features/IntFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/StringFeatures.cpp.o features/StringFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/FKFeatures.cpp.o features/FKFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/TOPFeatures.cpp.o features/TOPFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/RealFeatures.cpp.o features/RealFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/RealFileFeatures.cpp.o features/RealFileFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/CharFeatures.cpp.o features/CharFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/ShortFeatures.cpp.o features/ShortFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distributions/hmm/LinearHMM.cpp.o distributions/hmm/LinearHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distributions/hmm/GHMM.cpp.o distributions/hmm/GHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distributions/hmm/HMM.cpp.o distributions/hmm/HMM.cpp distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_likelihood_bin(FILE*)': distributions/hmm/HMM.cpp:4322: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_bin(FILE*)': distributions/hmm/HMM.cpp:4359: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4360: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4364: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4368: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4374: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4379: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4383: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4384: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4387: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4388: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4389: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4390: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4391: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4392: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4401: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4402: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4405: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4410: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4419: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4420: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4421: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4430: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4431: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4432: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4438: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4439: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4442: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4443: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4444: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4445: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4446: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4447: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_path_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4531: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4534: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4537: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4541: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4545: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4554: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4557: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4560: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4566: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4573: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4640: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4644: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4647: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4652: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4656: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4667: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4670: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4673: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4680: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4687: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distributions/histogram/Histogram.cpp.o distributions/histogram/Histogram.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distributions/Distribution.cpp.o distributions/Distribution.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/MatlabInterface.cpp.o interface/MatlabInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/RInterface.cpp.o interface/RInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/SGInterface.cpp.o interface/SGInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/PythonInterface.cpp.o interface/PythonInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/OctaveInterface.cpp.o interface/OctaveInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/CmdLineInterface.cpp.o interface/CmdLineInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/LogPlusOne.cpp.o preproc/LogPlusOne.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/NormDerivativeLem3.cpp.o preproc/NormDerivativeLem3.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/NormOne.cpp.o preproc/NormOne.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/PruneVarSubMean.cpp.o preproc/PruneVarSubMean.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/PCACut.cpp.o preproc/PCACut.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/PreProc.cpp.o preproc/PreProc.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/SortWordString.cpp.o preproc/SortWordString.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/SortUlongString.cpp.o preproc/SortUlongString.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/MultiClassSVM.cpp.o classifier/svm/MultiClassSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/GNPPSVM.cpp.o classifier/svm/GNPPSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SubGradientSVM.cpp.o classifier/svm/SubGradientSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/gnpplib.cpp.o classifier/svm/gnpplib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVM.cpp.o classifier/svm/SVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVM_linear.cpp.o classifier/svm/SVM_linear.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVMLin.cpp.o classifier/svm/SVMLin.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/libocas.cpp.o classifier/svm/libocas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/ssl.cpp.o classifier/svm/ssl.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/LibLinear.cpp.o classifier/svm/LibLinear.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVM_libsvm.cpp.o classifier/svm/SVM_libsvm.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/qpbsvmlib.cpp.o classifier/svm/qpbsvmlib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpdtsolve.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/WDSVMOcas.cpp.o classifier/svm/WDSVMOcas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/GMNPSVM.cpp.o classifier/svm/GMNPSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/gmnplib.cpp.o classifier/svm/gmnplib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/gpm.cpp.o classifier/svm/gpm.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/MPDSVM.cpp.o classifier/svm/MPDSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVMOcas.cpp.o classifier/svm/SVMOcas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/Tron.cpp.o classifier/svm/Tron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/CPLEXSVM.cpp.o classifier/svm/CPLEXSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/qpssvmlib.cpp.o classifier/svm/qpssvmlib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/pr_loqo.cpp.o classifier/svm/pr_loqo.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVMSGD.cpp.o classifier/svm/SVMSGD.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/gpdt.cpp.o classifier/svm/gpdt.cpp classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadGPDTBinary(char*)': classifier/svm/gpdt.cpp:220: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:227: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:228: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:235: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:236: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:242: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:243: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadSVMFile(char*)': classifier/svm/gpdt.cpp:296: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:347: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/LibSVMMultiClass.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/LibSVMOneClass.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/GPBTSVM.cpp.o classifier/svm/GPBTSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/LDA.cpp.o classifier/LDA.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/KNN.cpp.o classifier/KNN.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/Perceptron.cpp.o classifier/Perceptron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/PluginEstimate.cpp.o classifier/PluginEstimate.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/LPM.cpp.o classifier/LPM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/SparseLinearClassifier.cpp.o classifier/SparseLinearClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/Classifier.cpp.o classifier/Classifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/LPBoost.cpp.o classifier/LPBoost.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/LinearClassifier.cpp.o classifier/LinearClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/KernelPerceptron.cpp.o classifier/KernelPerceptron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/SubGradientLPM.cpp.o classifier/SubGradientLPM.cpp doxygen lib/Library.doxy python .doxy2swig.py --quiet --no-function-definition lib/doxygen_xml/index.xml lib/Library_doxygen.i swig -w473 -c++ -octave -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL lib/Library.i lib/Trie.h:69: Warning(312): Nested union not currently supported (ignored). lib/Trie.h:98: Warning(312): Nested union not currently supported (ignored). lib/Trie.h:164: Warning(362): operator= ignored lib/DynamicArray.h:272: Warning(362): operator= ignored lib/Array.h:354: Warning(362): operator= ignored lib/Array2.h:232: Warning(362): operator= ignored lib/Array3.h:275: Warning(362): operator= ignored python .scrub_docstrings.py stop lib/Library_wrap.cxx c++ -g -O2 -g -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/Library_wrap.cxx.o lib/Library_wrap.cxx doxygen clustering/Clustering.doxy python .doxy2swig.py --quiet --no-function-definition clustering/doxygen_xml/index.xml clustering/Clustering_doxygen.i swig -w473 -c++ -octave -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL clustering/Clustering.i python .scrub_docstrings.py stop clustering/Clustering_wrap.cxx c++ -g -O2 -g -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o clustering/Clustering_wrap.cxx.o clustering/Clustering_wrap.cxx doxygen regression/Regression.doxy python .doxy2swig.py --quiet --no-function-definition regression/doxygen_xml/index.xml regression/Regression_doxygen.i swig -w473 -c++ -octave -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL regression/Regression.i python .scrub_docstrings.py stop regression/Regression_wrap.cxx c++ -g -O2 -g -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o regression/Regression_wrap.cxx.o regression/Regression_wrap.cxx doxygen evaluation/Evaluation.doxy python .doxy2swig.py --quiet --no-function-definition evaluation/doxygen_xml/index.xml evaluation/Evaluation_doxygen.i swig -w473 -c++ -octave -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL evaluation/Evaluation.i python .scrub_docstrings.py stop evaluation/Evaluation_wrap.cxx c++ -g -O2 -g -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o evaluation/Evaluation_wrap.cxx.o evaluation/Evaluation_wrap.cxx doxygen structure/Structure.doxy python .doxy2swig.py --quiet --no-function-definition structure/doxygen_xml/index.xml structure/Structure_doxygen.i swig -w473 -c++ -octave -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL structure/Structure.i python .scrub_docstrings.py stop structure/Structure_wrap.cxx c++ -g -O2 -g -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o structure/Structure_wrap.cxx.o structure/Structure_wrap.cxx doxygen distance/Distance.doxy python .doxy2swig.py --quiet --no-function-definition distance/doxygen_xml/index.xml distance/Distance_doxygen.i swig -w473 -c++ -octave -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL distance/Distance.i python .scrub_docstrings.py stop distance/Distance_wrap.cxx c++ -g -O2 -g -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/Distance_wrap.cxx.o distance/Distance_wrap.cxx doxygen kernel/Kernel.doxy python .doxy2swig.py --quiet --no-function-definition kernel/doxygen_xml/index.xml kernel/Kernel_doxygen.i swig -w473 -c++ -octave -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL kernel/Kernel.i python .scrub_docstrings.py stop kernel/Kernel_wrap.cxx c++ -g -O2 -g -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/Kernel_wrap.cxx.o kernel/Kernel_wrap.cxx doxygen features/Features.doxy python .doxy2swig.py --quiet --no-function-definition features/doxygen_xml/index.xml features/Features_doxygen.i swig -w473 -c++ -octave -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL features/Features.i python .scrub_docstrings.py stop features/Features_wrap.cxx c++ -g -O2 -g -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/Features_wrap.cxx.o features/Features_wrap.cxx ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = char]': features/Features_wrap.cxx:16223: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = unsigned char]': features/Features_wrap.cxx:18788: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = short int]': features/Features_wrap.cxx:21352: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = short unsigned int]': features/Features_wrap.cxx:23786: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = int]': features/Features_wrap.cxx:26220: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = unsigned int]': features/Features_wrap.cxx:28654: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = long long int]': features/Features_wrap.cxx:31083: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result ./features/StringFeatures.h: In member function 'bool CStringFeatures::load_from_directory(char*) [with ST = long long unsigned int]': features/Features_wrap.cxx:33512: instantiated from here ./features/StringFeatures.h:625: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result doxygen distributions/Distribution.doxy python .doxy2swig.py --quiet --no-function-definition distributions/doxygen_xml/index.xml distributions/Distribution_doxygen.i swig -w473 -c++ -octave -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL distributions/Distribution.i python .scrub_docstrings.py stop distributions/Distribution_wrap.cxx c++ -g -O2 -g -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distributions/Distribution_wrap.cxx.o distributions/Distribution_wrap.cxx doxygen preproc/PreProc.doxy python .doxy2swig.py --quiet --no-function-definition preproc/doxygen_xml/index.xml preproc/PreProc_doxygen.i swig -w473 -c++ -octave -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL preproc/PreProc.i python .scrub_docstrings.py stop preproc/PreProc_wrap.cxx c++ -g -O2 -g -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/PreProc_wrap.cxx.o preproc/PreProc_wrap.cxx doxygen classifier/Classifier.doxy python .doxy2swig.py --quiet --no-function-definition classifier/doxygen_xml/index.xml classifier/Classifier_doxygen.i swig -w473 -c++ -octave -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DHAVE_SWIG -DHAVE_DOXYGEN -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL classifier/Classifier.i python .scrub_docstrings.py stop classifier/Classifier_wrap.cxx c++ -g -O2 -g -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/Classifier_wrap.cxx.o classifier/Classifier_wrap.cxx c++ -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o classifier/Classifier.oct classifier/Classifier_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o classifier/LinearClassifier.cpp.o classifier/Perceptron.cpp.o classifier/LDA.cpp.o classifier/SparseLinearClassifier.cpp.o classifier/svm/SVMLin.cpp.o classifier/svm/ssl.cpp.o classifier/svm/LibLinear.cpp.o classifier/svm/Tron.cpp.o classifier/svm/SVM_linear.cpp.o classifier/svm/SubGradientSVM.cpp.o kernel/Kernel.cpp.o kernel/KernelMachine.cpp.o classifier/svm/SVM.cpp.o classifier/svm/qpbsvmlib.cpp.o lib/Cplex.cpp.o classifier/svm/pr_loqo.cpp.o classifier/svm/SVMSGD.cpp.o classifier/SubGradientLPM.cpp.o classifier/svm/SVMOcas.cpp.o classifier/svm/libocas.cpp.o classifier/svm/qpssvmlib.cpp.o classifier/LPM.cpp.o classifier/LPBoost.cpp.o distributions/Distribution.cpp.o distributions/hmm/LinearHMM.cpp.o classifier/PluginEstimate.cpp.o classifier/KernelPerceptron.cpp.o classifier/svm/MultiClassSVM.cpp.o classifier/svm/SVM_libsvm.cpp.o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/GMNPSVM.cpp.o classifier/svm/gmnplib.cpp.o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/GPBTSVM.cpp.o classifier/svm/gpdt.cpp.o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpm.cpp.o classifier/svm/GNPPSVM.cpp.o classifier/svm/gnpplib.cpp.o classifier/svm/MPDSVM.cpp.o distance/Distance.cpp.o distance/DistanceMachine.cpp.o classifier/KNN.cpp.o classifier/svm/WDSVMOcas.cpp.o c++ -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o clustering/Clustering.oct clustering/Clustering_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o distance/Distance.cpp.o distance/DistanceMachine.cpp.o clustering/KMeans.cpp.o clustering/Hierarchical.cpp.o c++ -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o distance/Distance.oct distance/Distance_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o distance/Distance.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o distance/CanberraMetric.cpp.o distance/ChebyshewMetric.cpp.o distance/GeodesicMetric.cpp.o distance/JensenMetric.cpp.o distance/ManhattanMetric.cpp.o distance/MinkowskiMetric.cpp.o distance/HammingWordDistance.cpp.o distance/ManhattanWordDistance.cpp.o distance/CanberraWordDistance.cpp.o distance/EuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp.o distance/BrayCurtisDistance.cpp.o distance/ChiSquareDistance.cpp.o distance/CosineDistance.cpp.o distance/TanimotoDistance.cpp.o c++ -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o distributions/Distribution.oct distributions/Distribution_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o distributions/Distribution.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o distributions/histogram/Histogram.cpp.o distributions/hmm/HMM.cpp.o distributions/hmm/GHMM.cpp.o distributions/hmm/LinearHMM.cpp.o c++ -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o evaluation/Evaluation.oct evaluation/Evaluation_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o evaluation/PerformanceMeasures.cpp.o c++ -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o features/Features.oct features/Features_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o features/ByteFeatures.cpp.o features/ShortFeatures.cpp.o features/WordFeatures.cpp.o features/ShortRealFeatures.cpp.o features/CombinedFeatures.cpp.o features/MindyGramFeatures.cpp.o features/RealFileFeatures.cpp.o distributions/Distribution.cpp.o distributions/hmm/HMM.cpp.o features/FKFeatures.cpp.o features/TOPFeatures.cpp.o c++ -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o kernel/Kernel.oct kernel/Kernel_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o kernel/Kernel.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o kernel/KernelMachine.cpp.o classifier/svm/SVM.cpp.o kernel/ConstKernel.cpp.o kernel/DiagKernel.cpp.o kernel/LinearKernel.cpp.o kernel/PolyKernel.cpp.o kernel/CommWordStringKernel.cpp.o kernel/GaussianKernel.cpp.o features/ShortRealFeatures.cpp.o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShiftKernel.cpp.o kernel/SigmoidKernel.cpp.o kernel/SparseGaussianKernel.cpp.o kernel/SparseLinearKernel.cpp.o kernel/SparsePolyKernel.cpp.o kernel/Chi2Kernel.cpp.o features/WordFeatures.cpp.o kernel/AUCKernel.cpp.o lib/Trie.cpp.o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/CommUlongStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp.o kernel/MindyGramKernel.cpp.o features/MindyGramFeatures.cpp.o kernel/OligoKernel.cpp.o kernel/FixedDegreeStringKernel.cpp.o distributions/Distribution.cpp.o distributions/hmm/LinearHMM.cpp.o classifier/PluginEstimate.cpp.o kernel/HistogramWordStringKernel.cpp.o features/ByteFeatures.cpp.o kernel/LinearByteKernel.cpp.o kernel/LinearStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp.o kernel/LinearWordKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/MatchWordStringKernel.cpp.o features/CombinedFeatures.cpp.o kernel/CombinedKernel.cpp.o kernel/CustomKernel.cpp.o distance/Distance.cpp.o kernel/DistanceKernel.cpp.o c++ -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o lib/Library.oct lib/Library_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o lib/Trie.cpp.o c++ -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o preproc/PreProc.oct preproc/PreProc_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Features.cpp.o preproc/PreProc.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o preproc/LogPlusOne.cpp.o preproc/NormDerivativeLem3.cpp.o preproc/NormOne.cpp.o preproc/PCACut.cpp.o preproc/PruneVarSubMean.cpp.o preproc/SortUlongString.cpp.o preproc/SortWordString.cpp.o c++ -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o regression/Regression.oct regression/Regression_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o lib/io.cpp.o lib/Time.cpp.o lib/lapack.cpp.o base/Parallel.cpp.o lib/Mathematics.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/Signal.cpp.o features/Labels.cpp.o preproc/PreProc.cpp.o features/Features.cpp.o lib/File.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o features/StringFeatures.cpp.o features/RealFeatures.cpp.o classifier/Classifier.cpp.o kernel/Kernel.cpp.o classifier/svm/SVM.cpp.o kernel/KernelMachine.cpp.o regression/KRR.cpp.o classifier/svm/SVM_libsvm.cpp.o classifier/svm/LibSVM.cpp.o regression/svr/LibSVR.cpp.o c++ -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o structure/Structure.oct structure/Structure_wrap.cxx.o lib/memory.cpp.o lib/ShogunException.cpp.o base/Parallel.cpp.o base/Version.cpp.o base/SGObject.cpp.o lib/lapack.cpp.o lib/Mathematics.cpp.o lib/Signal.cpp.o lib/io.cpp.o lib/Time.cpp.o structure/Plif.cpp.o structure/PlifArray.cpp.o features/Features.cpp.o preproc/PreProc.cpp.o features/Alphabet.cpp.o features/CharFeatures.cpp.o lib/File.cpp.o features/Labels.cpp.o features/RealFeatures.cpp.o features/StringFeatures.cpp.o distributions/Distribution.cpp.o structure/DynProg.cpp.o ============================================================ ==== Done. Start with shogun. ============================================================ make[2]: Leaving directory `/build/buildd/shogun-0.6.7/build-octave-modular' make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-octave-modular' touch debian/stamp-build-octave-modular /usr/bin/make -C build-octave make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-octave' ================================= ==== Generating dependencies ==== ================================= find . -mindepth 2 -name "*.c" -o -name "*.cpp" \ -exec gcc -MM -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_OCTAVE -DHAVE_LARGEFILE -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL -I. -I/usr/include/octave-3.0.1 -I/usr/include {} -MT {}.o \; >.depend find . -mindepth 2 -name "*.i" -o \ -name "*.h" -o -name "*.cpp" -o -name "*.cpp" | \ cut -c 3- | \ python .generate_link_dependencies.py "" "oct" >>.depend test -f .depend && make make[2]: Entering directory `/build/buildd/shogun-0.6.7/build-octave' ======================================================================================== ==== Building shogun for platform Linux-ppc target sg.oct ==== opts: -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC ======================================================================================== c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/File.cpp.o lib/File.cpp lib/File.cpp: In member function 'bool CFile::write_char_valued_strings(const T_STRING*, int32_t)': lib/File.cpp:646: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/memory.cpp.o lib/memory.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/lapack.cpp.o lib/lapack.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/Cplex.cpp.o lib/Cplex.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/Mathematics.cpp.o lib/Mathematics.cpp lib/Mathematics.cpp: In static member function 'static int32_t CMath::calcroc(float64_t*, float64_t*, float64_t*, int32_t*, int32_t&, int32_t&, int32_t&, float64_t&, FILE*)': lib/Mathematics.cpp:345: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:346: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:347: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/Time.cpp.o lib/Time.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/io.cpp.o lib/io.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/Trie.cpp.o lib/Trie.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/Signal.cpp.o lib/Signal.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o lib/ShogunException.cpp.o lib/ShogunException.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o base/Version.cpp.o base/Version.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o base/SGObject.cpp.o base/SGObject.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o base/Parallel.cpp.o base/Parallel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o clustering/Hierarchical.cpp.o clustering/Hierarchical.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o clustering/KMeans.cpp.o clustering/KMeans.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o regression/svr/LibSVR.cpp.o regression/svr/LibSVR.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o regression/KRR.cpp.o regression/KRR.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o evaluation/PerformanceMeasures.cpp.o evaluation/PerformanceMeasures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o structure/Plif.cpp.o structure/Plif.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o structure/DynProg.cpp.o structure/DynProg.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o structure/PlifArray.cpp.o structure/PlifArray.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/BrayCurtisDistance.cpp.o distance/BrayCurtisDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/EuclidianDistance.cpp.o distance/EuclidianDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/CanberraMetric.cpp.o distance/CanberraMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/ChebyshewMetric.cpp.o distance/ChebyshewMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/JensenMetric.cpp.o distance/JensenMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/GeodesicMetric.cpp.o distance/GeodesicMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/CanberraWordDistance.cpp.o distance/CanberraWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/ManhattanMetric.cpp.o distance/ManhattanMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/SparseEuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/ChiSquareDistance.cpp.o distance/ChiSquareDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/TanimotoDistance.cpp.o distance/TanimotoDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/HammingWordDistance.cpp.o distance/HammingWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/MinkowskiMetric.cpp.o distance/MinkowskiMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/ManhattanWordDistance.cpp.o distance/ManhattanWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/Distance.cpp.o distance/Distance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/CosineDistance.cpp.o distance/CosineDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distance/DistanceMachine.cpp.o distance/DistanceMachine.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIPreProc.cpp.o guilib/GUIPreProc.cpp guilib/GUIPreProc.cpp: In member function 'bool CGUIPreProc::save(char*, int32_t)': guilib/GUIPreProc.cpp:197: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIHMM.cpp.o guilib/GUIHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIFeatures.cpp.o guilib/GUIFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIMath.cpp.o guilib/GUIMath.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIStructure.cpp.o guilib/GUIStructure.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIPluginEstimate.cpp.o guilib/GUIPluginEstimate.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIKernel.cpp.o guilib/GUIKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUITime.cpp.o guilib/GUITime.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUILabels.cpp.o guilib/GUILabels.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIClassifier.cpp.o guilib/GUIClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o guilib/GUIDistance.cpp.o guilib/GUIDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LinearKernel.cpp.o kernel/LinearKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/KernelMachine.cpp.o kernel/KernelMachine.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/CustomKernel.cpp.o kernel/CustomKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/DiagKernel.cpp.o kernel/DiagKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SparsePolyKernel.cpp.o kernel/SparsePolyKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/Kernel.cpp.o kernel/Kernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/MatchWordStringKernel.cpp.o kernel/MatchWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/CommWordStringKernel.cpp.o kernel/CommWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SigmoidKernel.cpp.o kernel/SigmoidKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/FixedDegreeStringKernel.cpp.o kernel/FixedDegreeStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LocalityImprovedStringKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/GaussianShiftKernel.cpp.o kernel/GaussianShiftKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/HistogramWordStringKernel.cpp.o kernel/HistogramWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/Chi2Kernel.cpp.o kernel/Chi2Kernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/DistanceKernel.cpp.o kernel/DistanceKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SparseLinearKernel.cpp.o kernel/SparseLinearKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/ConstKernel.cpp.o kernel/ConstKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/PolyMatchWordStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/OligoKernel.cpp.o kernel/OligoKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/CommUlongStringKernel.cpp.o kernel/CommUlongStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LinearStringKernel.cpp.o kernel/LinearStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SparseGaussianKernel.cpp.o kernel/SparseGaussianKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/AUCKernel.cpp.o kernel/AUCKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LinearByteKernel.cpp.o kernel/LinearByteKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/PolyKernel.cpp.o kernel/PolyKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LinearWordKernel.cpp.o kernel/LinearWordKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/LocalAlignmentStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/PyramidChi2.cpp.o kernel/PyramidChi2.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/CombinedKernel.cpp.o kernel/CombinedKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/GaussianKernel.cpp.o kernel/GaussianKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/SalzbergWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreeStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/MindyGramKernel.cpp.o kernel/MindyGramKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShortRealKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o kernel/WeightedCommWordStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/CombinedFeatures.cpp.o features/CombinedFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/ShortRealFeatures.cpp.o features/ShortRealFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/Features.cpp.o features/Features.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/ByteFeatures.cpp.o features/ByteFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/Labels.cpp.o features/Labels.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/Alphabet.cpp.o features/Alphabet.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/MindyGramFeatures.cpp.o features/MindyGramFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/WordFeatures.cpp.o features/WordFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/IntFeatures.cpp.o features/IntFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/StringFeatures.cpp.o features/StringFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/FKFeatures.cpp.o features/FKFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/TOPFeatures.cpp.o features/TOPFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/RealFeatures.cpp.o features/RealFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/RealFileFeatures.cpp.o features/RealFileFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/CharFeatures.cpp.o features/CharFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o features/ShortFeatures.cpp.o features/ShortFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distributions/hmm/LinearHMM.cpp.o distributions/hmm/LinearHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distributions/hmm/GHMM.cpp.o distributions/hmm/GHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distributions/hmm/HMM.cpp.o distributions/hmm/HMM.cpp distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_likelihood_bin(FILE*)': distributions/hmm/HMM.cpp:4322: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_bin(FILE*)': distributions/hmm/HMM.cpp:4359: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4360: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4364: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4368: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4374: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4379: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4383: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4384: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4387: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4388: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4389: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4390: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4391: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4392: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4401: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4402: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4405: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4410: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4419: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4420: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4421: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4430: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4431: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4432: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4438: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4439: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4442: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4443: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4444: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4445: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4446: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4447: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_path_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4531: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4534: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4537: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4541: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4545: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4554: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4557: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4560: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4566: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4573: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4640: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4644: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4647: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4652: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4656: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4667: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4670: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4673: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4680: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4687: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distributions/histogram/Histogram.cpp.o distributions/histogram/Histogram.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o distributions/Distribution.cpp.o distributions/Distribution.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/MatlabInterface.cpp.o interface/MatlabInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/RInterface.cpp.o interface/RInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/SGInterface.cpp.o interface/SGInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/PythonInterface.cpp.o interface/PythonInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/OctaveInterface.cpp.o interface/OctaveInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o interface/CmdLineInterface.cpp.o interface/CmdLineInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/LogPlusOne.cpp.o preproc/LogPlusOne.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/NormDerivativeLem3.cpp.o preproc/NormDerivativeLem3.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/NormOne.cpp.o preproc/NormOne.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/PruneVarSubMean.cpp.o preproc/PruneVarSubMean.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/PCACut.cpp.o preproc/PCACut.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/PreProc.cpp.o preproc/PreProc.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/SortWordString.cpp.o preproc/SortWordString.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o preproc/SortUlongString.cpp.o preproc/SortUlongString.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/MultiClassSVM.cpp.o classifier/svm/MultiClassSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/GNPPSVM.cpp.o classifier/svm/GNPPSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SubGradientSVM.cpp.o classifier/svm/SubGradientSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/gnpplib.cpp.o classifier/svm/gnpplib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVM.cpp.o classifier/svm/SVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVM_linear.cpp.o classifier/svm/SVM_linear.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVMLin.cpp.o classifier/svm/SVMLin.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/libocas.cpp.o classifier/svm/libocas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/ssl.cpp.o classifier/svm/ssl.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/LibLinear.cpp.o classifier/svm/LibLinear.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVM_libsvm.cpp.o classifier/svm/SVM_libsvm.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/qpbsvmlib.cpp.o classifier/svm/qpbsvmlib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpdtsolve.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/WDSVMOcas.cpp.o classifier/svm/WDSVMOcas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/GMNPSVM.cpp.o classifier/svm/GMNPSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/gmnplib.cpp.o classifier/svm/gmnplib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/gpm.cpp.o classifier/svm/gpm.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/MPDSVM.cpp.o classifier/svm/MPDSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVMOcas.cpp.o classifier/svm/SVMOcas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/Tron.cpp.o classifier/svm/Tron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/CPLEXSVM.cpp.o classifier/svm/CPLEXSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/qpssvmlib.cpp.o classifier/svm/qpssvmlib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/pr_loqo.cpp.o classifier/svm/pr_loqo.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/SVMSGD.cpp.o classifier/svm/SVMSGD.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/gpdt.cpp.o classifier/svm/gpdt.cpp classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadGPDTBinary(char*)': classifier/svm/gpdt.cpp:220: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:227: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:228: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:235: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:236: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:242: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:243: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadSVMFile(char*)': classifier/svm/gpdt.cpp:296: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:347: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/LibSVMMultiClass.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/LibSVMOneClass.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/svm/GPBTSVM.cpp.o classifier/svm/GPBTSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/LDA.cpp.o classifier/LDA.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/KNN.cpp.o classifier/KNN.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/Perceptron.cpp.o classifier/Perceptron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/PluginEstimate.cpp.o classifier/PluginEstimate.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/LPM.cpp.o classifier/LPM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/SparseLinearClassifier.cpp.o classifier/SparseLinearClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/Classifier.cpp.o classifier/Classifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/LPBoost.cpp.o classifier/LPBoost.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/LinearClassifier.cpp.o classifier/LinearClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/KernelPerceptron.cpp.o classifier/KernelPerceptron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC -c -I. -I/usr/include/octave-3.0.1 -I/usr/include -o classifier/SubGradientLPM.cpp.o classifier/SubGradientLPM.cpp c++ ./lib/File.cpp.o ./lib/memory.cpp.o ./lib/lapack.cpp.o ./lib/Cplex.cpp.o ./lib/Mathematics.cpp.o ./lib/Time.cpp.o ./lib/io.cpp.o ./lib/Trie.cpp.o ./lib/Signal.cpp.o ./lib/ShogunException.cpp.o ./base/Version.cpp.o ./base/SGObject.cpp.o ./base/Parallel.cpp.o ./clustering/Hierarchical.cpp.o ./clustering/KMeans.cpp.o ./regression/svr/LibSVR.cpp.o ./regression/KRR.cpp.o ./evaluation/PerformanceMeasures.cpp.o ./structure/Plif.cpp.o ./structure/DynProg.cpp.o ./structure/PlifArray.cpp.o ./distance/BrayCurtisDistance.cpp.o ./distance/EuclidianDistance.cpp.o ./distance/CanberraMetric.cpp.o ./distance/ChebyshewMetric.cpp.o ./distance/JensenMetric.cpp.o ./distance/GeodesicMetric.cpp.o ./distance/CanberraWordDistance.cpp.o ./distance/ManhattanMetric.cpp.o ./distance/SparseEuclidianDistance.cpp.o ./distance/ChiSquareDistance.cpp.o ./distance/TanimotoDistance.cpp.o ./distance/HammingWordDistance.cpp.o ./distance/MinkowskiMetric.cpp.o ./distance/ManhattanWordDistance.cpp.o ./distance/Distance.cpp.o ./distance/CosineDistance.cpp.o ./distance/DistanceMachine.cpp.o ./guilib/GUIPreProc.cpp.o ./guilib/GUIHMM.cpp.o ./guilib/GUIFeatures.cpp.o ./guilib/GUIMath.cpp.o ./guilib/GUIStructure.cpp.o ./guilib/GUIPluginEstimate.cpp.o ./guilib/GUIKernel.cpp.o ./guilib/GUITime.cpp.o ./guilib/GUILabels.cpp.o ./guilib/GUIClassifier.cpp.o ./guilib/GUIDistance.cpp.o ./kernel/LinearKernel.cpp.o ./kernel/KernelMachine.cpp.o ./kernel/CustomKernel.cpp.o ./kernel/DiagKernel.cpp.o ./kernel/SparsePolyKernel.cpp.o ./kernel/PolyMatchStringKernel.cpp.o ./kernel/Kernel.cpp.o ./kernel/MatchWordStringKernel.cpp.o ./kernel/CommWordStringKernel.cpp.o ./kernel/SigmoidKernel.cpp.o ./kernel/FixedDegreeStringKernel.cpp.o ./kernel/LocalityImprovedStringKernel.cpp.o ./kernel/GaussianShiftKernel.cpp.o ./kernel/HistogramWordStringKernel.cpp.o ./kernel/Chi2Kernel.cpp.o ./kernel/SimpleLocalityImprovedStringKernel.cpp.o ./kernel/DistanceKernel.cpp.o ./kernel/SparseLinearKernel.cpp.o ./kernel/ConstKernel.cpp.o ./kernel/PolyMatchWordStringKernel.cpp.o ./kernel/OligoKernel.cpp.o ./kernel/CommUlongStringKernel.cpp.o ./kernel/LinearStringKernel.cpp.o ./kernel/SparseGaussianKernel.cpp.o ./kernel/AUCKernel.cpp.o ./kernel/LinearByteKernel.cpp.o ./kernel/PolyKernel.cpp.o ./kernel/LinearWordKernel.cpp.o ./kernel/LocalAlignmentStringKernel.cpp.o ./kernel/PyramidChi2.cpp.o ./kernel/CombinedKernel.cpp.o ./kernel/GaussianKernel.cpp.o ./kernel/SalzbergWordStringKernel.cpp.o ./kernel/WeightedDegreeStringKernel.cpp.o ./kernel/MindyGramKernel.cpp.o ./kernel/WeightedDegreePositionStringKernel.cpp.o ./kernel/GaussianShortRealKernel.cpp.o ./kernel/WeightedCommWordStringKernel.cpp.o ./features/CombinedFeatures.cpp.o ./features/ShortRealFeatures.cpp.o ./features/Features.cpp.o ./features/ByteFeatures.cpp.o ./features/Labels.cpp.o ./features/Alphabet.cpp.o ./features/MindyGramFeatures.cpp.o ./features/WordFeatures.cpp.o ./features/IntFeatures.cpp.o ./features/StringFeatures.cpp.o ./features/FKFeatures.cpp.o ./features/TOPFeatures.cpp.o ./features/RealFeatures.cpp.o ./features/RealFileFeatures.cpp.o ./features/CharFeatures.cpp.o ./features/ShortFeatures.cpp.o ./distributions/hmm/LinearHMM.cpp.o ./distributions/hmm/GHMM.cpp.o ./distributions/hmm/HMM.cpp.o ./distributions/histogram/Histogram.cpp.o ./distributions/Distribution.cpp.o ./interface/MatlabInterface.cpp.o ./interface/RInterface.cpp.o ./interface/SGInterface.cpp.o ./interface/PythonInterface.cpp.o ./interface/OctaveInterface.cpp.o ./interface/CmdLineInterface.cpp.o ./preproc/LogPlusOne.cpp.o ./preproc/NormDerivativeLem3.cpp.o ./preproc/NormOne.cpp.o ./preproc/PruneVarSubMean.cpp.o ./preproc/PCACut.cpp.o ./preproc/PreProc.cpp.o ./preproc/SortWordString.cpp.o ./preproc/SortUlongString.cpp.o ./classifier/svm/MultiClassSVM.cpp.o ./classifier/svm/GNPPSVM.cpp.o ./classifier/svm/SubGradientSVM.cpp.o ./classifier/svm/gnpplib.cpp.o ./classifier/svm/SVM.cpp.o ./classifier/svm/SVM_linear.cpp.o ./classifier/svm/SVMLin.cpp.o ./classifier/svm/libocas.cpp.o ./classifier/svm/ssl.cpp.o ./classifier/svm/LibLinear.cpp.o ./classifier/svm/SVM_libsvm.cpp.o ./classifier/svm/qpbsvmlib.cpp.o ./classifier/svm/gpdtsolve.cpp.o ./classifier/svm/WDSVMOcas.cpp.o ./classifier/svm/GMNPSVM.cpp.o ./classifier/svm/gmnplib.cpp.o ./classifier/svm/gpm.cpp.o ./classifier/svm/MPDSVM.cpp.o ./classifier/svm/SVMOcas.cpp.o ./classifier/svm/Tron.cpp.o ./classifier/svm/CPLEXSVM.cpp.o ./classifier/svm/qpssvmlib.cpp.o ./classifier/svm/pr_loqo.cpp.o ./classifier/svm/SVMSGD.cpp.o ./classifier/svm/gpdt.cpp.o ./classifier/svm/LibSVM.cpp.o ./classifier/svm/LibSVMMultiClass.cpp.o ./classifier/svm/LibSVMOneClass.cpp.o ./classifier/svm/GPBTSVM.cpp.o ./classifier/LDA.cpp.o ./classifier/KNN.cpp.o ./classifier/Perceptron.cpp.o ./classifier/PluginEstimate.cpp.o ./classifier/LPM.cpp.o ./classifier/SparseLinearClassifier.cpp.o ./classifier/Classifier.cpp.o ./classifier/LPBoost.cpp.o ./classifier/LinearClassifier.cpp.o ./classifier/KernelPerceptron.cpp.o ./classifier/SubGradientLPM.cpp.o -shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -o sg.oct #removeconfighunk ============================================================ ==== Done. Start with shogun. ============================================================ make[2]: Leaving directory `/build/buildd/shogun-0.6.7/build-octave' make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-octave' touch debian/stamp-build-octave /usr/bin/make -C build-r make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-r' ================================= ==== Generating dependencies ==== ================================= find . -mindepth 2 -name "*.c" -o -name "*.cpp" \ -exec gcc -MM -DLINUX -DHAVE_POWL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_R -DHAVE_LARGEFILE -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL -I. -I/usr/share/R/include {} -MT {}.o \; >.depend find . -mindepth 2 -name "*.i" -o \ -name "*.h" -o -name "*.cpp" -o -name "*.cpp" | \ cut -c 3- | \ python .generate_link_dependencies.py "" "so" >>.depend test -f .depend && make make[2]: Entering directory `/build/buildd/shogun-0.6.7/build-r' ======================================================================================== ==== Building shogun for platform Linux-ppc target sg.so ==== opts: -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic ======================================================================================== c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o lib/File.cpp.o lib/File.cpp lib/File.cpp: In member function 'bool CFile::write_char_valued_strings(const T_STRING*, int32_t)': lib/File.cpp:646: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o lib/memory.cpp.o lib/memory.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o lib/lapack.cpp.o lib/lapack.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o lib/Cplex.cpp.o lib/Cplex.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o lib/Mathematics.cpp.o lib/Mathematics.cpp lib/Mathematics.cpp: In static member function 'static int32_t CMath::calcroc(float64_t*, float64_t*, float64_t*, int32_t*, int32_t&, int32_t&, int32_t&, float64_t&, FILE*)': lib/Mathematics.cpp:345: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:346: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result lib/Mathematics.cpp:347: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o lib/Time.cpp.o lib/Time.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o lib/io.cpp.o lib/io.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o lib/Trie.cpp.o lib/Trie.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o lib/Signal.cpp.o lib/Signal.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o lib/ShogunException.cpp.o lib/ShogunException.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o base/Version.cpp.o base/Version.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o base/SGObject.cpp.o base/SGObject.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o base/Parallel.cpp.o base/Parallel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o clustering/Hierarchical.cpp.o clustering/Hierarchical.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o clustering/KMeans.cpp.o clustering/KMeans.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o regression/svr/LibSVR.cpp.o regression/svr/LibSVR.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o regression/KRR.cpp.o regression/KRR.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o evaluation/PerformanceMeasures.cpp.o evaluation/PerformanceMeasures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o structure/Plif.cpp.o structure/Plif.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o structure/DynProg.cpp.o structure/DynProg.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o structure/PlifArray.cpp.o structure/PlifArray.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/BrayCurtisDistance.cpp.o distance/BrayCurtisDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/EuclidianDistance.cpp.o distance/EuclidianDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/CanberraMetric.cpp.o distance/CanberraMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/ChebyshewMetric.cpp.o distance/ChebyshewMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/JensenMetric.cpp.o distance/JensenMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/GeodesicMetric.cpp.o distance/GeodesicMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/CanberraWordDistance.cpp.o distance/CanberraWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/ManhattanMetric.cpp.o distance/ManhattanMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/SparseEuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/ChiSquareDistance.cpp.o distance/ChiSquareDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/TanimotoDistance.cpp.o distance/TanimotoDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/HammingWordDistance.cpp.o distance/HammingWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/MinkowskiMetric.cpp.o distance/MinkowskiMetric.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/ManhattanWordDistance.cpp.o distance/ManhattanWordDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/Distance.cpp.o distance/Distance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/CosineDistance.cpp.o distance/CosineDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distance/DistanceMachine.cpp.o distance/DistanceMachine.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o guilib/GUIPreProc.cpp.o guilib/GUIPreProc.cpp guilib/GUIPreProc.cpp: In member function 'bool CGUIPreProc::save(char*, int32_t)': guilib/GUIPreProc.cpp:197: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o guilib/GUIHMM.cpp.o guilib/GUIHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o guilib/GUIFeatures.cpp.o guilib/GUIFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o guilib/GUIMath.cpp.o guilib/GUIMath.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o guilib/GUIStructure.cpp.o guilib/GUIStructure.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o guilib/GUIPluginEstimate.cpp.o guilib/GUIPluginEstimate.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o guilib/GUIKernel.cpp.o guilib/GUIKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o guilib/GUITime.cpp.o guilib/GUITime.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o guilib/GUILabels.cpp.o guilib/GUILabels.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o guilib/GUIClassifier.cpp.o guilib/GUIClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o guilib/GUIDistance.cpp.o guilib/GUIDistance.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/LinearKernel.cpp.o kernel/LinearKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/KernelMachine.cpp.o kernel/KernelMachine.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/CustomKernel.cpp.o kernel/CustomKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/DiagKernel.cpp.o kernel/DiagKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/SparsePolyKernel.cpp.o kernel/SparsePolyKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/Kernel.cpp.o kernel/Kernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/MatchWordStringKernel.cpp.o kernel/MatchWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/CommWordStringKernel.cpp.o kernel/CommWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/SigmoidKernel.cpp.o kernel/SigmoidKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/FixedDegreeStringKernel.cpp.o kernel/FixedDegreeStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/LocalityImprovedStringKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/GaussianShiftKernel.cpp.o kernel/GaussianShiftKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/HistogramWordStringKernel.cpp.o kernel/HistogramWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/Chi2Kernel.cpp.o kernel/Chi2Kernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/DistanceKernel.cpp.o kernel/DistanceKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/SparseLinearKernel.cpp.o kernel/SparseLinearKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/ConstKernel.cpp.o kernel/ConstKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/PolyMatchWordStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/OligoKernel.cpp.o kernel/OligoKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/CommUlongStringKernel.cpp.o kernel/CommUlongStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/LinearStringKernel.cpp.o kernel/LinearStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/SparseGaussianKernel.cpp.o kernel/SparseGaussianKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/AUCKernel.cpp.o kernel/AUCKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/LinearByteKernel.cpp.o kernel/LinearByteKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/PolyKernel.cpp.o kernel/PolyKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/LinearWordKernel.cpp.o kernel/LinearWordKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/LocalAlignmentStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/PyramidChi2.cpp.o kernel/PyramidChi2.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/CombinedKernel.cpp.o kernel/CombinedKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/GaussianKernel.cpp.o kernel/GaussianKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/SalzbergWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreeStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/MindyGramKernel.cpp.o kernel/MindyGramKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShortRealKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o kernel/WeightedCommWordStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/CombinedFeatures.cpp.o features/CombinedFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/ShortRealFeatures.cpp.o features/ShortRealFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/Features.cpp.o features/Features.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/ByteFeatures.cpp.o features/ByteFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/Labels.cpp.o features/Labels.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/Alphabet.cpp.o features/Alphabet.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/MindyGramFeatures.cpp.o features/MindyGramFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/WordFeatures.cpp.o features/WordFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/IntFeatures.cpp.o features/IntFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/StringFeatures.cpp.o features/StringFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/FKFeatures.cpp.o features/FKFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/TOPFeatures.cpp.o features/TOPFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/RealFeatures.cpp.o features/RealFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/RealFileFeatures.cpp.o features/RealFileFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/CharFeatures.cpp.o features/CharFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o features/ShortFeatures.cpp.o features/ShortFeatures.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distributions/hmm/LinearHMM.cpp.o distributions/hmm/LinearHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distributions/hmm/GHMM.cpp.o distributions/hmm/GHMM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distributions/hmm/HMM.cpp.o distributions/hmm/HMM.cpp distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_likelihood_bin(FILE*)': distributions/hmm/HMM.cpp:4322: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_bin(FILE*)': distributions/hmm/HMM.cpp:4359: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4360: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4364: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4368: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4374: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4379: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4383: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4384: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4387: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4388: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4389: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4390: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4391: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4392: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4401: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4402: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4405: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4410: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4419: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4420: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4421: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4430: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4431: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4432: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4438: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4439: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4442: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4443: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4444: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4445: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4446: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4447: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_path_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4531: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4534: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4537: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4541: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4545: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4554: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4557: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4560: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4566: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4573: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp: In member function 'bool CHMM::save_model_derivatives_bin(FILE*)': distributions/hmm/HMM.cpp:4640: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4644: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4647: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4652: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4656: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4667: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4670: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4673: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4680: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result distributions/hmm/HMM.cpp:4687: warning: ignoring return value of 'size_t fwrite(const void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distributions/histogram/Histogram.cpp.o distributions/histogram/Histogram.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o distributions/Distribution.cpp.o distributions/Distribution.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o interface/MatlabInterface.cpp.o interface/MatlabInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o interface/RInterface.cpp.o interface/RInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o interface/SGInterface.cpp.o interface/SGInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o interface/PythonInterface.cpp.o interface/PythonInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o interface/OctaveInterface.cpp.o interface/OctaveInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o interface/CmdLineInterface.cpp.o interface/CmdLineInterface.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o preproc/LogPlusOne.cpp.o preproc/LogPlusOne.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o preproc/NormDerivativeLem3.cpp.o preproc/NormDerivativeLem3.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o preproc/NormOne.cpp.o preproc/NormOne.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o preproc/PruneVarSubMean.cpp.o preproc/PruneVarSubMean.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o preproc/PCACut.cpp.o preproc/PCACut.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o preproc/PreProc.cpp.o preproc/PreProc.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o preproc/SortWordString.cpp.o preproc/SortWordString.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o preproc/SortUlongString.cpp.o preproc/SortUlongString.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/MultiClassSVM.cpp.o classifier/svm/MultiClassSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/GNPPSVM.cpp.o classifier/svm/GNPPSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/SubGradientSVM.cpp.o classifier/svm/SubGradientSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/gnpplib.cpp.o classifier/svm/gnpplib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/SVM.cpp.o classifier/svm/SVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/SVM_linear.cpp.o classifier/svm/SVM_linear.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/SVMLin.cpp.o classifier/svm/SVMLin.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/libocas.cpp.o classifier/svm/libocas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/ssl.cpp.o classifier/svm/ssl.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/LibLinear.cpp.o classifier/svm/LibLinear.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/SVM_libsvm.cpp.o classifier/svm/SVM_libsvm.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/qpbsvmlib.cpp.o classifier/svm/qpbsvmlib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpdtsolve.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/WDSVMOcas.cpp.o classifier/svm/WDSVMOcas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/GMNPSVM.cpp.o classifier/svm/GMNPSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/gmnplib.cpp.o classifier/svm/gmnplib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/gpm.cpp.o classifier/svm/gpm.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/MPDSVM.cpp.o classifier/svm/MPDSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/SVMOcas.cpp.o classifier/svm/SVMOcas.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/Tron.cpp.o classifier/svm/Tron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/CPLEXSVM.cpp.o classifier/svm/CPLEXSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/qpssvmlib.cpp.o classifier/svm/qpssvmlib.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/pr_loqo.cpp.o classifier/svm/pr_loqo.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/SVMSGD.cpp.o classifier/svm/SVMSGD.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/gpdt.cpp.o classifier/svm/gpdt.cpp classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadGPDTBinary(char*)': classifier/svm/gpdt.cpp:220: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:227: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:228: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:235: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:236: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:242: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:243: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp: In member function 'int32_t QPproblem::ReadSVMFile(char*)': classifier/svm/gpdt.cpp:296: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result classifier/svm/gpdt.cpp:347: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/LibSVMMultiClass.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/LibSVMOneClass.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/svm/GPBTSVM.cpp.o classifier/svm/GPBTSVM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/LDA.cpp.o classifier/LDA.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/KNN.cpp.o classifier/KNN.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/Perceptron.cpp.o classifier/Perceptron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/PluginEstimate.cpp.o classifier/PluginEstimate.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/LPM.cpp.o classifier/LPM.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/SparseLinearClassifier.cpp.o classifier/SparseLinearClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/Classifier.cpp.o classifier/Classifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/LPBoost.cpp.o classifier/LPBoost.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/LinearClassifier.cpp.o classifier/LinearClassifier.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/KernelPerceptron.cpp.o classifier/KernelPerceptron.cpp c++ -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fpic -c -I. -I/usr/share/R/include -o classifier/SubGradientLPM.cpp.o classifier/SubGradientLPM.cpp c++ ./lib/File.cpp.o ./lib/memory.cpp.o ./lib/lapack.cpp.o ./lib/Cplex.cpp.o ./lib/Mathematics.cpp.o ./lib/Time.cpp.o ./lib/io.cpp.o ./lib/Trie.cpp.o ./lib/Signal.cpp.o ./lib/ShogunException.cpp.o ./base/Version.cpp.o ./base/SGObject.cpp.o ./base/Parallel.cpp.o ./clustering/Hierarchical.cpp.o ./clustering/KMeans.cpp.o ./regression/svr/LibSVR.cpp.o ./regression/KRR.cpp.o ./evaluation/PerformanceMeasures.cpp.o ./structure/Plif.cpp.o ./structure/DynProg.cpp.o ./structure/PlifArray.cpp.o ./distance/BrayCurtisDistance.cpp.o ./distance/EuclidianDistance.cpp.o ./distance/CanberraMetric.cpp.o ./distance/ChebyshewMetric.cpp.o ./distance/JensenMetric.cpp.o ./distance/GeodesicMetric.cpp.o ./distance/CanberraWordDistance.cpp.o ./distance/ManhattanMetric.cpp.o ./distance/SparseEuclidianDistance.cpp.o ./distance/ChiSquareDistance.cpp.o ./distance/TanimotoDistance.cpp.o ./distance/HammingWordDistance.cpp.o ./distance/MinkowskiMetric.cpp.o ./distance/ManhattanWordDistance.cpp.o ./distance/Distance.cpp.o ./distance/CosineDistance.cpp.o ./distance/DistanceMachine.cpp.o ./guilib/GUIPreProc.cpp.o ./guilib/GUIHMM.cpp.o ./guilib/GUIFeatures.cpp.o ./guilib/GUIMath.cpp.o ./guilib/GUIStructure.cpp.o ./guilib/GUIPluginEstimate.cpp.o ./guilib/GUIKernel.cpp.o ./guilib/GUITime.cpp.o ./guilib/GUILabels.cpp.o ./guilib/GUIClassifier.cpp.o ./guilib/GUIDistance.cpp.o ./kernel/LinearKernel.cpp.o ./kernel/KernelMachine.cpp.o ./kernel/CustomKernel.cpp.o ./kernel/DiagKernel.cpp.o ./kernel/SparsePolyKernel.cpp.o ./kernel/PolyMatchStringKernel.cpp.o ./kernel/Kernel.cpp.o ./kernel/MatchWordStringKernel.cpp.o ./kernel/CommWordStringKernel.cpp.o ./kernel/SigmoidKernel.cpp.o ./kernel/FixedDegreeStringKernel.cpp.o ./kernel/LocalityImprovedStringKernel.cpp.o ./kernel/GaussianShiftKernel.cpp.o ./kernel/HistogramWordStringKernel.cpp.o ./kernel/Chi2Kernel.cpp.o ./kernel/SimpleLocalityImprovedStringKernel.cpp.o ./kernel/DistanceKernel.cpp.o ./kernel/SparseLinearKernel.cpp.o ./kernel/ConstKernel.cpp.o ./kernel/PolyMatchWordStringKernel.cpp.o ./kernel/OligoKernel.cpp.o ./kernel/CommUlongStringKernel.cpp.o ./kernel/LinearStringKernel.cpp.o ./kernel/SparseGaussianKernel.cpp.o ./kernel/AUCKernel.cpp.o ./kernel/LinearByteKernel.cpp.o ./kernel/PolyKernel.cpp.o ./kernel/LinearWordKernel.cpp.o ./kernel/LocalAlignmentStringKernel.cpp.o ./kernel/PyramidChi2.cpp.o ./kernel/CombinedKernel.cpp.o ./kernel/GaussianKernel.cpp.o ./kernel/SalzbergWordStringKernel.cpp.o ./kernel/WeightedDegreeStringKernel.cpp.o ./kernel/MindyGramKernel.cpp.o ./kernel/WeightedDegreePositionStringKernel.cpp.o ./kernel/GaussianShortRealKernel.cpp.o ./kernel/WeightedCommWordStringKernel.cpp.o ./features/CombinedFeatures.cpp.o ./features/ShortRealFeatures.cpp.o ./features/Features.cpp.o ./features/ByteFeatures.cpp.o ./features/Labels.cpp.o ./features/Alphabet.cpp.o ./features/MindyGramFeatures.cpp.o ./features/WordFeatures.cpp.o ./features/IntFeatures.cpp.o ./features/StringFeatures.cpp.o ./features/FKFeatures.cpp.o ./features/TOPFeatures.cpp.o ./features/RealFeatures.cpp.o ./features/RealFileFeatures.cpp.o ./features/CharFeatures.cpp.o ./features/ShortFeatures.cpp.o ./distributions/hmm/LinearHMM.cpp.o ./distributions/hmm/GHMM.cpp.o ./distributions/hmm/HMM.cpp.o ./distributions/histogram/Histogram.cpp.o ./distributions/Distribution.cpp.o ./interface/MatlabInterface.cpp.o ./interface/RInterface.cpp.o ./interface/SGInterface.cpp.o ./interface/PythonInterface.cpp.o ./interface/OctaveInterface.cpp.o ./interface/CmdLineInterface.cpp.o ./preproc/LogPlusOne.cpp.o ./preproc/NormDerivativeLem3.cpp.o ./preproc/NormOne.cpp.o ./preproc/PruneVarSubMean.cpp.o ./preproc/PCACut.cpp.o ./preproc/PreProc.cpp.o ./preproc/SortWordString.cpp.o ./preproc/SortUlongString.cpp.o ./classifier/svm/MultiClassSVM.cpp.o ./classifier/svm/GNPPSVM.cpp.o ./classifier/svm/SubGradientSVM.cpp.o ./classifier/svm/gnpplib.cpp.o ./classifier/svm/SVM.cpp.o ./classifier/svm/SVM_linear.cpp.o ./classifier/svm/SVMLin.cpp.o ./classifier/svm/libocas.cpp.o ./classifier/svm/ssl.cpp.o ./classifier/svm/LibLinear.cpp.o ./classifier/svm/SVM_libsvm.cpp.o ./classifier/svm/qpbsvmlib.cpp.o ./classifier/svm/gpdtsolve.cpp.o ./classifier/svm/WDSVMOcas.cpp.o ./classifier/svm/GMNPSVM.cpp.o ./classifier/svm/gmnplib.cpp.o ./classifier/svm/gpm.cpp.o ./classifier/svm/MPDSVM.cpp.o ./classifier/svm/SVMOcas.cpp.o ./classifier/svm/Tron.cpp.o ./classifier/svm/CPLEXSVM.cpp.o ./classifier/svm/qpssvmlib.cpp.o ./classifier/svm/pr_loqo.cpp.o ./classifier/svm/SVMSGD.cpp.o ./classifier/svm/gpdt.cpp.o ./classifier/svm/LibSVM.cpp.o ./classifier/svm/LibSVMMultiClass.cpp.o ./classifier/svm/LibSVMOneClass.cpp.o ./classifier/svm/GPBTSVM.cpp.o ./classifier/LDA.cpp.o ./classifier/KNN.cpp.o ./classifier/Perceptron.cpp.o ./classifier/PluginEstimate.cpp.o ./classifier/LPM.cpp.o ./classifier/SparseLinearClassifier.cpp.o ./classifier/Classifier.cpp.o ./classifier/LPBoost.cpp.o ./classifier/LinearClassifier.cpp.o ./classifier/KernelPerceptron.cpp.o ./classifier/SubGradientLPM.cpp.o -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas -L/usr/lib/R/lib -lR -shared -o sg.so #removeconfighunk ============================================================ ==== Done. Start with shogun. ============================================================ make[2]: Leaving directory `/build/buildd/shogun-0.6.7/build-r' make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-r' touch debian/stamp-build-r mkdir build-doc cp -a doc src build-doc cd build-doc/src && ./configure --disable-cpudetection \ --prefix=/usr --interface=python-modular Running configure for SHOGUN version 0.6.7 Enabling modular python interface Detected Operating System: Linux Detected Host Architecture: ppc Checking for C Compiler ... 4.3.3, ok Checking for C Compiler flags ... -g -O2 -g -Wall -O2 Checking for C++ Compiler ... 4.3.3, ok Checking for C++ Compiler flags ... -g -O2 -g -Wall -O2 Checking for makedepend ... gcc -MM Checking for Python ... 2.5.3 Checking for GNU Make ... GNU Make 3.81 Checking for Doxygen ... 1.5.7.1 Checking for CPU type ... PPC970FX altivec Checking for GCC & CPU optimization abilities ... none Checking for Word Size ... 32 bit Checking for Math support (-lm) ... yes Checking for Math powl() support ... yes Checking for Math sqrtl() support ... yes Checking for Math log2() support ... yes Checking for Posix threads support ... yes Checking for Mindy support ... no - never mind Checking for AMD ACML support ... no Checking for Intel MKL support ... no Checking for Atlas support ... yes Checking for Python numpy support ... 1.1.1 Checking for Python/Python Numpy Developer Files ... yes Checking for CPLEX support ... no Checking for GLPK ... no Checking for lpsolve Developer Files ... no Checking for SWIG ... 1.3.36 SHOGUN was configured for python-modular interface with the following configure options --disable-cpudetection --prefix=/usr --interface=python-modular type "make" now to compile touch debian/stamp-configure-doc /usr/bin/make -C build-doc/doc make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-doc/doc' doxygen Warning: Tag `DETAILS_AT_TOP' at line 162 of file Doxyfile has become obsolete. 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Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/Distance.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/Distance.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/Distance.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/Distance.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/DistanceMachine.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/DistanceMachine.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/DistanceMachine.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/DistanceMachine.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/EuclidianDistance.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/EuclidianDistance.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/EuclidianDistance.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/EuclidianDistance.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/GeodesicMetric.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/GeodesicMetric.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/GeodesicMetric.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/GeodesicMetric.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/HammingWordDistance.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/HammingWordDistance.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/HammingWordDistance.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/HammingWordDistance.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/JensenMetric.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/JensenMetric.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/JensenMetric.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/JensenMetric.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/ManhattanMetric.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/ManhattanMetric.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/ManhattanMetric.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/ManhattanMetric.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/ManhattanWordDistance.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/ManhattanWordDistance.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/ManhattanWordDistance.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/ManhattanWordDistance.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/MinkowskiMetric.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/MinkowskiMetric.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/MinkowskiMetric.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/MinkowskiMetric.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/RealDistance.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/RealDistance.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/SimpleDistance.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/SimpleDistance.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/SparseDistance.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/SparseDistance.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/SparseEuclidianDistance.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/SparseEuclidianDistance.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/SparseEuclidianDistance.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/SparseEuclidianDistance.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/StringDistance.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/StringDistance.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/TanimotoDistance.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/TanimotoDistance.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distance/TanimotoDistance.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distance/TanimotoDistance.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distributions/Distribution.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distributions/Distribution.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distributions/Distribution.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distributions/Distribution.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distributions/histogram/Histogram.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distributions/histogram/Histogram.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distributions/histogram/Histogram.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distributions/histogram/Histogram.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distributions/hmm/GHMM.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distributions/hmm/GHMM.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distributions/hmm/GHMM.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distributions/hmm/GHMM.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/distributions/hmm/HMM.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/distributions/hmm/HMM.cpp... 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Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/Alphabet.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/Alphabet.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/Alphabet.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/ByteFeatures.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/ByteFeatures.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/ByteFeatures.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/ByteFeatures.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/CharFeatures.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/CharFeatures.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/CharFeatures.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/CharFeatures.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/CombinedFeatures.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/CombinedFeatures.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/CombinedFeatures.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/CombinedFeatures.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/DummyFeatures.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/DummyFeatures.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/Features.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/Features.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/Features.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/Features.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/FKFeatures.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/FKFeatures.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/FKFeatures.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/FKFeatures.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/IntFeatures.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/IntFeatures.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/IntFeatures.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/IntFeatures.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/Labels.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/Labels.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/Labels.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/Labels.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/MindyGramFeatures.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/MindyGramFeatures.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/MindyGramFeatures.h... 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Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/StringFeatures.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/StringFeatures.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/StringFeatures.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/TOPFeatures.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/TOPFeatures.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/TOPFeatures.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/TOPFeatures.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/WordFeatures.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/WordFeatures.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/features/WordFeatures.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/features/WordFeatures.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/AUCKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/AUCKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/AUCKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/AUCKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/AvgDiagKernelNormalizer.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/AvgDiagKernelNormalizer.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/Chi2Kernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/Chi2Kernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/Chi2Kernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/Chi2Kernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/CombinedKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/CombinedKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/CombinedKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/CombinedKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/CommUlongStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/CommUlongStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/CommUlongStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/CommUlongStringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/CommWordStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/CommWordStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/CommWordStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/CommWordStringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/ConstKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/ConstKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/ConstKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/ConstKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/CustomKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/CustomKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/CustomKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/CustomKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/DiagKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/DiagKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/DiagKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/DiagKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/DiceKernelNormalizer.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/DiceKernelNormalizer.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/DistanceKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/DistanceKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/DistanceKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/DistanceKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/FirstElementKernelNormalizer.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/FirstElementKernelNormalizer.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/FixedDegreeStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/FixedDegreeStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/FixedDegreeStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/FixedDegreeStringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianShiftKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianShiftKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianShiftKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianShiftKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianShortRealKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianShortRealKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianShortRealKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/GaussianShortRealKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/HistogramWordStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/HistogramWordStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/HistogramWordStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/HistogramWordStringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/IdentityKernelNormalizer.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/IdentityKernelNormalizer.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/Kernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/Kernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/Kernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/Kernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/KernelMachine.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/KernelMachine.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/KernelMachine.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/KernelMachine.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/KernelNormalizer.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/KernelNormalizer.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearByteKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearByteKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearByteKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearByteKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearStringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearWordKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearWordKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearWordKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LinearWordKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LocalAlignmentStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LocalAlignmentStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LocalAlignmentStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LocalAlignmentStringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LocalityImprovedStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LocalityImprovedStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/LocalityImprovedStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/LocalityImprovedStringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/MatchWordStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/MatchWordStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/MatchWordStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/MatchWordStringKernel.h... 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Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/PyramidChi2.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/SalzbergWordStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/SalzbergWordStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/SalzbergWordStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/SalzbergWordStringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/SigmoidKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/SigmoidKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/SigmoidKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/SigmoidKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/SimpleKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/SimpleKernel.h... 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Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/SparseLinearKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/SparseLinearKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/SparseLinearKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/SparseLinearKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/SparsePolyKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/SparsePolyKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/SparsePolyKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/SparsePolyKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/SqrtDiagKernelNormalizer.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/SqrtDiagKernelNormalizer.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/StringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/StringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/TanimotoKernelNormalizer.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/TanimotoKernelNormalizer.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedCommWordStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedCommWordStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedCommWordStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedCommWordStringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedDegreePositionStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedDegreePositionStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedDegreePositionStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedDegreePositionStringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedDegreeStringKernel.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedDegreeStringKernel.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedDegreeStringKernel.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/kernel/WeightedDegreeStringKernel.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/lib/Array.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/lib/Array.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/lib/Array2.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/lib/Array2.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/lib/Array3.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/lib/Array3.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/lib/Cache.h... 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Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/preproc/NormDerivativeLem3.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/preproc/NormDerivativeLem3.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/preproc/NormOne.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/preproc/NormOne.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/preproc/NormOne.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/preproc/NormOne.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/preproc/PCACut.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/preproc/PCACut.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/preproc/PCACut.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/preproc/PCACut.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/preproc/PreProc.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/preproc/PreProc.cpp... 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Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/preproc/SortWordString.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/preproc/SortWordString.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/preproc/SortWordString.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/preproc/SortWordString.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/preproc/SparsePreProc.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/preproc/SparsePreProc.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/preproc/StringPreProc.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/preproc/StringPreProc.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/regression/KRR.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/regression/KRR.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/regression/KRR.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/regression/KRR.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/regression/Regression.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/regression/Regression.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/regression/svr/LibSVR.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/regression/svr/LibSVR.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/regression/svr/LibSVR.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/regression/svr/LibSVR.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/structure/DynProg.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/structure/DynProg.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/structure/DynProg.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/structure/DynProg.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/structure/Plif.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/structure/Plif.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/structure/Plif.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/structure/Plif.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/structure/PlifArray.cpp... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/structure/PlifArray.cpp... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/structure/PlifArray.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/structure/PlifArray.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/src/structure/PlifBase.h... Parsing file /build/buildd/shogun-0.6.7/build-doc/src/structure/PlifBase.h... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/Authors.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/Authors.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/Documentation.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/Documentation.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/FAQ.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/FAQ.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/Installation.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/Installation.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/Interfaces.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/Interfaces.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/License.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/License.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/Methods.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/Methods.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/ModularInterfaces.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/ModularInterfaces.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/Screenshots.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/Screenshots.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/StaticCommandLineInterface.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/StaticCommandLineInterface.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/StaticInterfaces.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/StaticInterfaces.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/StaticOctaveInterface.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/StaticOctaveInterface.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/StaticPythonInterface.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/StaticPythonInterface.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/StaticRInterface.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/StaticRInterface.mainpage... Preprocessing /build/buildd/shogun-0.6.7/build-doc/doc/pages/Tutorial.mainpage... Parsing file /build/buildd/shogun-0.6.7/build-doc/doc/pages/Tutorial.mainpage... Building group list... Building directory list... Building namespace list... Building file list... Searching for included using directives... Building class list... Associating documentation with classes... Computing nesting relations for classes... Searching for members imported via using declarations... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for documented variables... Building m/build/buildd/shogun-0.6.7/build-doc/src/kernel/OligoKernel.cpp:43: Warning: no matching class member found for bool COligoKernel::cmpOligos_(pair< int32_t, double > a, pair< int32_t, float64_t > b) Possible candidates: static bool COligoKernel::cmpOligos_(std::pair< int32_t, float64_t > a, std::pair< int32_t, float64_t > b) /build/buildd/shogun-0.6.7/build-doc/src/kernel/OligoKernel.cpp:51: Warning: no matching class member found for void COligoKernel::encodeOligo(const string &sequence, uint32_t k_mer_length, const string &allowed_characters, vector< pair< int32_t, float64_t > > &values) Possible candidates: static void COligoKernel::encodeOligo(const std::string &sequence, uint32_t k_mer_length, const std::string &allowed_characters, std::vector< std::pair< int32_t, float64_t > > &values) /build/buildd/shogun-0.6.7/build-doc/src/kernel/OligoKernel.cpp:109: Warning: no matching class member found for void COligoKernel::getSequences(const vector< string > &sequences, uint32_t k_mer_length, const string &allowed_characters, vector< vector< pair< int32_t, float64_t > > > &encoded_sequences) Possible candidates: static void COligoKernel::getSequences(const std::vector< std::string > &sequences, uint32_t k_mer_length, const std::string &allowed_characters, std::vector< std::vector< std::pair< int32_t, float64_t > > > &encoded_sequences) /build/buildd/shogun-0.6.7/build-doc/src/kernel/OligoKernel.cpp:123: Warning: no matching class member found for void COligoKernel::getExpFunctionCache(double sigma, uint32_t sequence_length, vector< double > &cache) Possible candidates: static void COligoKernel::getExpFunctionCache(float64_t sigma, uint32_t sequence_length, std::vector< float64_t > &cache) /build/buildd/shogun-0.6.7/build-doc/src/kernel/OligoKernel.cpp:136: Warning: no matching class member found for float64_t COligoKernel::kernelOligoFast(const vector< pair< int32_t, double > > &x, const vector< pair< int32_t, float64_t > > &y, const vector< float64_t > &gauss_table, int32_t max_distance) Possible candidates: static float64_t COligoKernel::kernelOligoFast(const std::vector< std::pair< int32_t, float64_t > > &x, const std::vector< std::pair< int32_t, float64_t > > &y, const std::vector< float64_t > &exp_cache, int32_t max_distance=-1) /build/buildd/shogun-0.6.7/build-doc/src/kernel/OligoKernel.cpp:218: Warning: no matching class member found for float64_t COligoKernel::kernelOligo(const vector< pair< int32_t, double > > &x, const vector< pair< int32_t, float64_t > > &y, float64_t sigma_square) Possible candidates: static float64_t COligoKernel::kernelOligo(const std::vector< std::pair< int32_t, float64_t > > &x, const std::vector< std::pair< int32_t, float64_t > > &y, float64_t sigma_square) ember list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Creating members for template instances... Computing class relations... Add enum values to enums... Searching for member function documentation... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Freeing entry tree Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding todo/test/bug list items... Computing dependencies between directories... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Combining using relations... Adding members to index pages... Generating style sheet... Generating index page... Generating page index... Generating example documentation... Generating file sources... Generating code for file Alphabet.cpp... Generating code for file Alphabet.h... Generating code for file Array.h... Generating code for file Array2.h... Generating code for file Array3.h... Generating code for file AUCKernel.cpp... Generating code for file AUCKernel.h... Generating code for file Authors.mainpage... Generating code for file AvgDiagKernelNormalizer.h... Generating code for file BrayCurtisDistance.cpp... Generating code for file BrayCurtisDistance.h... Generating code for file ByteFeatures.cpp... Generating code for file ByteFeatures.h... Generating code for file Cache.h... Generating code for file CanberraMetric.cpp... Generating code for file CanberraMetric.h... Generating code for file CanberraWordDistance.cpp... Generating code for file CanberraWordDistance.h... Generating code for file CharFeatures.cpp... Generating code for file CharFeatures.h... Generating code for file ChebyshewMetric.cpp... Generating code for file ChebyshewMetric.h... Generating code for file Chi2Kernel.cpp... Generating code for file Chi2Kernel.h... Generating code for file ChiSquareDistance.cpp... Generating code for file ChiSquareDistance.h... Generating code for file Classifier.cpp... Generating code for file Classifier.h... Generating code for file CombinedFeatures.cpp... Generating code for file CombinedFeatures.h... Generating code for file CombinedKernel.cpp... Generating code for file CombinedKernel.h... Generating code for file common.h... Generating code for file CommUlongStringKernel.cpp... Generating code for file CommUlongStringKernel.h... Generating code for file CommWordStringKernel.cpp... Generating code for file CommWordStringKernel.h... Generating code for file config.h... Generating code for file ConstKernel.cpp... Generating code for file ConstKernel.h... Generating code for file CosineDistance.cpp... Generating code for file CosineDistance.h... Generating code for file Cplex.cpp... Generating code for file Cplex.h... Generating code for file CPLEXSVM.cpp... Generating code for file CPLEXSVM.h... Generating code for file CustomKernel.cpp... Generating code for file CustomKernel.h... Generating code for file DiagKernel.cpp... Generating code for file DiagKernel.h... Generating code for file DiceKernelNormalizer.h... Generating code for file Distance.cpp... Generating code for file Distance.h... Generating code for file DistanceKernel.cpp... Generating code for file DistanceKernel.h... Generating code for file DistanceMachine.cpp... Generating code for file DistanceMachine.h... Generating code for file Distribution.cpp... Generating code for file Distribution.h... Generating code for file Documentation.mainpage... Generating code for file DummyFeatures.h... Generating code for file DynamicArray.h... Generating code for file DynProg.cpp... Generating code for file DynProg.h... Generating code for file EuclidianDistance.cpp... Generating code for file EuclidianDistance.h... Generating code for file FAQ.mainpage... Generating code for file Features.cpp... Generating code for file Features.h... Generating code for file File.cpp... Generating code for file File.h... Generating code for file FirstElementKernelNormalizer.h... Generating code for file FixedDegreeStringKernel.cpp... Generating code for file FixedDegreeStringKernel.h... Generating code for file FKFeatures.cpp... Generating code for file FKFeatures.h... Generating code for file GaussianKernel.cpp... Generating code for file GaussianKernel.h... Generating code for file GaussianShiftKernel.cpp... Generating code for file GaussianShiftKernel.h... Generating code for file GaussianShortRealKernel.cpp... Generating code for file GaussianShortRealKernel.h... Generating code for file GeodesicMetric.cpp... Generating code for file GeodesicMetric.h... Generating code for file GHMM.cpp... Generating code for file GHMM.h... Generating code for file gmnplib.cpp... Generating code for file gmnplib.h... Generating code for file GMNPSVM.cpp... Generating code for file GMNPSVM.h... Generating code for file gnpplib.cpp... Generating code for file gnpplib.h... Generating code for file GNPPSVM.cpp... Generating code for file GNPPSVM.h... Generating code for file GPBTSVM.cpp... Generating code for file GPBTSVM.h... Generating code for file gpdt.cpp... Generating code for file gpdt.h... Generating code for file gpdtsolve.cpp... Generating code for file gpdtsolve.h... Generating code for file gpm.cpp... Generating code for file gpm.h... Generating code for file HammingWordDistance.cpp... Generating code for file HammingWordDistance.h... Generating code for file Hierarchical.cpp... Generating code for file Hierarchical.h... Generating code for file Histogram.cpp... Generating code for file Histogram.h... Generating code for file HistogramWordStringKernel.cpp... Generating code for file HistogramWordStringKernel.h... Generating code for file HMM.cpp... Generating code for file HMM.h... Generating code for file IdentityKernelNormalizer.h... Generating code for file Installation.mainpage... Generating code for file Interfaces.mainpage... Generating code for file IntFeatures.cpp... Generating code for file IntFeatures.h... Generating code for file io.cpp... Generating code for file io.h... Generating code for file JensenMetric.cpp... Generating code for file JensenMetric.h... Generating code for file Kernel.cpp... Generating code for file Kernel.h... Generating code for file KernelMachine.cpp... Generating code for file KernelMachine.h... Generating code for file KernelNormalizer.h... Generating code for file KernelPerceptron.cpp... Generating code for file KernelPerceptron.h... Generating code for file KMeans.cpp... Generating code for file KMeans.h... Generating code for file KNN.cpp... Generating code for file KNN.h... Generating code for file KRR.cpp... Generating code for file KRR.h... Generating code for file Labels.cpp... Generating code for file Labels.h... Generating code for file lapack.cpp... Generating code for file lapack.h... Generating code for file LDA.cpp... Generating code for file LDA.h... Generating code for file LibLinear.cpp... Generating code for file LibLinear.h... Generating code for file libocas.cpp... Generating code for file libocas.h... Generating code for file libocas_common.h... Generating code for file LibSVM.cpp... Generating code for file LibSVM.h... Generating code for file LibSVMMultiClass.cpp... Generating code for file LibSVMMultiClass.h... Generating code for file LibSVMOneClass.cpp... Generating code for file LibSVMOneClass.h... Generating code for file LibSVR.cpp... Generating code for file LibSVR.h... Generating code for file License.mainpage... Generating code for file LinearByteKernel.cpp... Generating code for file LinearByteKernel.h... Generating code for file LinearClassifier.cpp... Generating code for file LinearClassifier.h... Generating code for file LinearHMM.cpp... Generating code for file LinearHMM.h... Generating code for file LinearKernel.cpp... Generating code for file LinearKernel.h... Generating code for file LinearStringKernel.cpp... Generating code for file LinearStringKernel.h... Generating code for file LinearWordKernel.cpp... Generating code for file LinearWordKernel.h... Generating code for file List.h... Generating code for file LocalAlignmentStringKernel.cpp... Generating code for file LocalAlignmentStringKernel.h... Generating code for file LocalityImprovedStringKernel.cpp... Generating code for file LocalityImprovedStringKernel.h... Generating code for file LogPlusOne.cpp... Generating code for file LogPlusOne.h... Generating code for file LPBoost.cpp... Generating code for file LPBoost.h... Generating code for file LPM.cpp... Generating code for file LPM.h... Generating code for file ManhattanMetric.cpp... Generating code for file ManhattanMetric.h... Generating code for file ManhattanWordDistance.cpp... Generating code for file ManhattanWordDistance.h... Generating code for file MatchWordStringKernel.cpp... Generating code for file MatchWordStringKernel.h... Generating code for file Mathematics.cpp... Generating code for file Mathematics.h... Generating code for file matlab.h... Generating code for file memory.cpp... Generating code for file memory.h... Generating code for file Methods.mainpage... Generating code for file MindyGramFeatures.cpp... Generating code for file MindyGramFeatures.h... Generating code for file MindyGramKernel.cpp... Generating code for file MindyGramKernel.h... Generating code for file MinkowskiMetric.cpp... Generating code for file MinkowskiMetric.h... Generating code for file ModularInterfaces.mainpage... Generating code for file MPDSVM.cpp... Generating code for file MPDSVM.h... Generating code for file MultiClassSVM.cpp... Generating code for file MultiClassSVM.h... Generating code for file NormDerivativeLem3.cpp... Generating code for file NormDerivativeLem3.h... Generating code for file NormOne.cpp... Generating code for file NormOne.h... Generating code for file octave.h... Generating code for file OligoKernel.cpp... Generating code for file OligoKernel.h... Generating code for file Parallel.cpp... Generating code for file Parallel.h... Generating code for file PCACut.cpp... Generating code for file PCACut.h... Generating code for file Perceptron.cpp... Generating code for file Perceptron.h... Generating code for file PerformanceMeasures.cpp... Generating code for file PerformanceMeasures.h... Generating code for file Plif.cpp... Generating code for file Plif.h... Generating code for file PlifArray.cpp... Generating code for file PlifArray.h... Generating code for file PlifBase.h... Generating code for file PluginEstimate.cpp... Generating code for file PluginEstimate.h... Generating code for file PolyKernel.cpp... Generating code for file PolyKernel.h... Generating code for file PolyMatchStringKernel.cpp... Generating code for file PolyMatchStringKernel.h... Generating code for file PolyMatchWordStringKernel.cpp... Generating code for file PolyMatchWordStringKernel.h... Generating code for file pr_loqo.cpp... Generating code for file pr_loqo.h... Generating code for file PreProc.cpp... Generating code for file PreProc.h... Generating code for file PruneVarSubMean.cpp... Generating code for file PruneVarSubMean.h... Generating code for file PyramidChi2.cpp... Generating code for file PyramidChi2.h... Generating code for file python.h... Generating code for file qpbsvmlib.cpp... Generating code for file qpbsvmlib.h... Generating code for file qpssvmlib.cpp... Generating code for file qpssvmlib.h... Generating code for file r.h... Generating code for file RealDistance.h... Generating code for file RealFeatures.cpp... Generating code for file RealFeatures.h... Generating code for file RealFileFeatures.cpp... Generating code for file RealFileFeatures.h... Generating code for file Regression.h... Generating code for file SalzbergWordStringKernel.cpp... Generating code for file SalzbergWordStringKernel.h... Generating code for file Screenshots.mainpage... Generating code for file SGObject.cpp... Generating code for file SGObject.h... Generating code for file ShogunException.cpp... Generating code for file ShogunException.h... Generating code for file ShortFeatures.cpp... Generating code for file ShortFeatures.h... Generating code for file ShortRealFeatures.cpp... Generating code for file ShortRealFeatures.h... Generating code for file SigmoidKernel.cpp... Generating code for file SigmoidKernel.h... Generating code for file Signal.cpp... Generating code for file Signal.h... Generating code for file SimpleDistance.h... Generating code for file SimpleFeatures.h... Generating code for file SimpleFile.h... Generating code for file SimpleKernel.h... Generating code for file SimpleLocalityImprovedStringKernel.cpp... Generating code for file SimpleLocalityImprovedStringKernel.h... Generating code for file SimplePreProc.h... Generating code for file SortUlongString.cpp... Generating code for file SortUlongString.h... Generating code for file SortWordString.cpp... Generating code for file SortWordString.h... Generating code for file SparseDistance.h... Generating code for file SparseEuclidianDistance.cpp... Generating code for file SparseEuclidianDistance.h... Generating code for file SparseFeatures.h... Generating code for file SparseGaussianKernel.cpp... Generating code for file SparseGaussianKernel.h... Generating code for file SparseKernel.h... Generating code for file SparseLinearClassifier.cpp... Generating code for file SparseLinearClassifier.h... Generating code for file SparseLinearKernel.cpp... Generating code for file SparseLinearKernel.h... Generating code for file SparsePolyKernel.cpp... Generating code for file SparsePolyKernel.h... Generating code for file SparsePreProc.h... Generating code for file SqrtDiagKernelNormalizer.h... Generating code for file ssl.cpp... Generating code for file ssl.h... Generating code for file StaticCommandLineInterface.mainpage... Generating code for file StaticInterfaces.mainpage... Generating code for file StaticOctaveInterface.mainpage... Generating code for file StaticPythonInterface.mainpage... Generating code for file StaticRInterface.mainpage... Generating code for file StringDistance.h... Generating code for file StringFeatures.cpp... Generating code for file StringFeatures.h... Generating code for file StringKernel.h... Generating code for file StringPreProc.h... Generating code for file SubGradientLPM.cpp... Generating code for file SubGradientLPM.h... Generating code for file SubGradientSVM.cpp... Generating code for file SubGradientSVM.h... Generating code for file SVM.cpp... Generating code for file SVM.h... Generating code for file SVM_libsvm.cpp... Generating code for file SVM_libsvm.h... Generating code for file SVM_linear.cpp... Generating code for file SVM_linear.h... Generating code for file SVMLin.cpp... Generating code for file SVMLin.h... Generating code for file SVMOcas.cpp... Generating code for file SVMOcas.h... Generating code for file SVMSGD.cpp... Generating code for file SVMSGD.h... Generating code for file TanimotoDistance.cpp... Generating code for file TanimotoDistance.h... Generating code for file TanimotoKernelNormalizer.h... Generating code for file Time.cpp... Generating code for file Time.h... Generating code for file TOPFeatures.cpp... Generating code for file TOPFeatures.h... Generating code for file Trie.cpp... Generating code for file Trie.h... Generating code for file Tron.cpp... Generating code for file Tron.h... Generating code for file Tutorial.mainpage... Generating code for file Version.cpp... Generating code for file Version.h... Generating code for file versionstring.h... Generating code for file WDSVMOcas.cpp... Generating code for file WDSVMOcas.h... Generating code for file WeightedCommWordStringKernel.cpp... Generating code for file WeightedCommWordStringKernel.h... Generating code for file WeightedDegreePositionStringKernel.cpp... Generating code for file WeightedDegreePositionStringKernel.h... Generating code for file WeightedDegreeStringKernel.cpp... Generating code for file WeightedDegreeStringKernel.h... Generating code for file WordFeatures.cpp... Generating code for file WordFeatures.h... Generating file documentation... Generating docs for file Alphabet.cpp... Generating docs for file Alphabet.h... Generating docs for file Array.h... Generating docs for file Array2.h... Generating docs for file Array3.h... Generating docs for file AUCKernel.cpp... Generating docs for file AUCKernel.h... Generating docs for file Authors.mainpage... Generating docs for file AvgDiagKernelNormalizer.h... Generating docs for file BrayCurtisDistance.cpp... Generating docs for file BrayCurtisDistance.h... Generating docs for file ByteFeatures.cpp... Generating docs for file ByteFeatures.h... Generating docs for file Cache.h... Generating docs for file CanberraMetric.cpp... Generating docs for file CanberraMetric.h... Generating docs for file CanberraWordDistance.cpp... Generating docs for file CanberraWordDistance.h... Generating docs for file CharFeatures.cpp... Generating docs for file CharFeatures.h... Generating docs for file ChebyshewMetric.cpp... Generating docs for file ChebyshewMetric.h... Generating docs for file Chi2Kernel.cpp... Generating docs for file Chi2Kernel.h... Generating docs for file ChiSquareDistance.cpp... Generating docs for file ChiSquareDistance.h... Generating docs for file Classifier.cpp... Generating docs for file Classifier.h... Generating docs for file CombinedFeatures.cpp... Generating docs for file CombinedFeatures.h... Generating docs for file CombinedKernel.cpp... Generating docs for file CombinedKernel.h... Generating docs for file common.h... Generating docs for file CommUlongStringKernel.cpp... Generating docs for file CommUlongStringKernel.h... Generating docs for file CommWordStringKernel.cpp... Generating docs for file CommWordStringKernel.h... Generating docs for file config.h... Generating docs for file ConstKernel.cpp... Generating docs for file ConstKernel.h... Generating docs for file CosineDistance.cpp... Generating docs for file CosineDistance.h... Generating docs for file Cplex.cpp... Generating docs for file Cplex.h... Generating docs for file CPLEXSVM.cpp... Generating docs for file CPLEXSVM.h... Generating docs for file CustomKernel.cpp... Generating docs for file CustomKernel.h... 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Generating docs forThis is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./_formulas.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/graphics/epsfig.sty (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty) (/etc/texmf/tex/latex/config/graphics.cfg) (/usr/share/texmf-texlive/tex/latex/graphics/dvips.def)))) No file _formulas.aux. 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[78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] [94] Overfull \hbox (12.83392pt too wide) in alignment at lines 287--287 [][][] [] [95] [96] [97] [98] [99] [100] [101] [102] (./_formulas.aux) ) (see the transcript file for additional information) Output written on _formulas.dvi (102 pages, 21340 bytes). Transcript written on _formulas.log. compound Solver... Generating docs for nested compound Solver::SolutionInfo... Generating docs for compound Solver_NU... Generating docs for compound SVC_Q... Generating docs for compound svm_model... Generating docs for compound svm_node... Generating docs for compound svm_parameter... Generating docs for compound svm_problem... Generating docs for compound SVR_Q... Generating docs for compound T_ALPHA_BETA... Generating docs for compound T_HMM_INDIZES... Generating docs for compound T_STRING... Generating docs for compound thread_data... Generating docs for compound thread_qsort... Generating docs for compound TreeParseInfo... Generating docs for compound TSparse... Generating docs for compound TSparseEntry... Generating docs for compound vector_double... Generating docs for compound vector_int... Generating docs for compound wdocas_thread_params_add... Generating docs for compound wdocas_thread_params_output... Generating graphical class hierarchy... Generating namespace index... Generating namespace member index... Generating graph info page... Generating directory documentation... Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/base/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/classifier/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/clustering/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/distance/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/distributions/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/evaluation/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/features/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/distributions/histogram/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/distributions/hmm/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/kernel/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/lib/ Generating dependency graph for directory pages/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/preproc/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/regression/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/structure/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/classifier/svm/ Generating dependency graph for directory /build/buildd/shogun-0.6.7/build-doc/src/regression/svr/ Generating file index... 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form_97.png for formula Generating image form_98.png for formula Generating image form_99.png for formula Generating image form_100.png for formula Generating image form_101.png for formula make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-doc/doc' touch debian/stamp-build-doc /usr/bin/fakeroot debian/rules binary-arch test -x debian/rules dh_testroot dh_clean -k dh_installdirs -A mkdir -p "." dh_installdirs -pshogun-dbg dh_installdirs -pshogun-python-modular set -x; /usr/bin/make -C build-python-modular2.4 install DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python-modular; /usr/bin/make -C build-python-modular2.5 install DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python-modular; + /usr/bin/make -C build-python-modular2.4 install DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python-modular make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python-modular2.4' install -d -m755 "/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun" install -m644 ./classifier/_Classifier.so ./clustering/_Clustering.so ./distance/_Distance.so ./distributions/_Distribution.so ./evaluation/_Evaluation.so ./features/_Features.so ./kernel/_Kernel.so ./lib/_Library.so ./preproc/_PreProc.so ./regression/_Regression.so ./structure/_Structure.so ./lib/Library.py ./clustering/Clustering.py ./regression/Regression.py ./evaluation/Evaluation.py ./structure/Structure.py ./distance/Distance.py ./kernel/Kernel.py ./features/Features.py ./distributions/Distribution.py ./preproc/PreProc.py ./classifier/Classifier.py "/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun" echo '__all__= [' > "/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/__init__.py" for i in ./lib/Library.py ./clustering/Clustering.py ./regression/Regression.py ./evaluation/Evaluation.py ./structure/Structure.py ./distance/Distance.py ./kernel/Kernel.py ./features/Features.py ./distributions/Distribution.py ./preproc/PreProc.py ./classifier/Classifier.py ; do echo $i | sed -e 's=.*/="=' -e 's/\.py/", /' >>/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/__init__.py; done echo ']' >> "/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/__init__.py" make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python-modular2.4' + /usr/bin/make -C build-python-modular2.5 install DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python-modular make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python-modular2.5' install -d -m755 "/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun" install -m644 ./classifier/_Classifier.so ./clustering/_Clustering.so ./distance/_Distance.so ./distributions/_Distribution.so ./evaluation/_Evaluation.so ./features/_Features.so ./kernel/_Kernel.so ./lib/_Library.so ./preproc/_PreProc.so ./regression/_Regression.so ./structure/_Structure.so ./lib/Library.py ./clustering/Clustering.py ./regression/Regression.py ./evaluation/Evaluation.py ./structure/Structure.py ./distance/Distance.py ./kernel/Kernel.py ./features/Features.py ./distributions/Distribution.py ./preproc/PreProc.py ./classifier/Classifier.py "/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun" echo '__all__= [' > "/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/__init__.py" for i in ./lib/Library.py ./clustering/Clustering.py ./regression/Regression.py ./evaluation/Evaluation.py ./structure/Structure.py ./distance/Distance.py ./kernel/Kernel.py ./features/Features.py ./distributions/Distribution.py ./preproc/PreProc.py ./classifier/Classifier.py ; do echo $i | sed -e 's=.*/="=' -e 's/\.py/", /' >>/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/__init__.py; done echo ']' >> "/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/__init__.py" make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python-modular2.5' set -x; /usr/bin/make -C build-python-modular2.4 tests DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python-modular; /usr/bin/make -C build-python-modular2.5 tests DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python-modular; + /usr/bin/make -C build-python-modular2.4 tests DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python-modular make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python-modular2.4' cd ../testsuite/python-modular && ( PYTHON=python2.4 PYTHONPATH="/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.4/site-packages" ./test_all.sh ) *** Testing in ../data/classifier/*.m ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_16.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_0017_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_023_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_15_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/KNN_EuclidianDistance_1_3.m OK ../data/classifier/LDA_1_01.m OK ../data/classifier/LibLinear_0017_1_1en05_True.m OK ../data/classifier/LibLinear_023_1_1en05_True.m OK ../data/classifier/LibLinear_15_1_1en05_True.m OK ../data/classifier/LibLinear_30_16_1en05_True.m OK ../data/classifier/LibLinear_30_1_1en05_True.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/Perceptron_01_1_1000.m /build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/Classifier.py:833: RuntimeWarning: Perceptron algorithm did not converge after 1000 iterations. return _Classifier.Perceptron_train(*args) OK ../data/classifier/SVMLin_0017_1_1en05_True.m OK ../data/classifier/SVMLin_023_1_1en05_True.m OK ../data/classifier/SVMLin_15_1_1en05_True.m OK ../data/classifier/SVMLin_30_16_1en05_True.m OK ../data/classifier/SVMLin_30_1_1en05_True.m OK ../data/classifier/SVMOcas_0017_1_1en05_False.m OK ../data/classifier/SVMOcas_023_1_1en05_False.m OK ../data/classifier/SVMOcas_15_1_1en05_False.m OK ../data/classifier/SVMOcas_30_16_1en05_False.m ERROR classified: 1.258481e-04, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 ../data/classifier/SVMOcas_30_1_1en05_False.m ERROR classified: 1.258481e-04, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 ../data/classifier/SVMSGD_0017_1_1en05_True.m OK ../data/classifier/SVMSGD_023_1_1en05_True.m OK ../data/classifier/SVMSGD_15_1_1en05_True.m OK ../data/classifier/SVMSGD_30_16_1en05_True.m OK ../data/classifier/SVMSGD_30_1_1en05_True.m OK ../data/classifier/SubGradientSVM_05_0017_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_023_1_1en05_False.m ERROR classified: 1.373642e-01, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 ../data/classifier/SubGradientSVM_05_15_1_1en05_False.m ERROR classified: 1.370000e-01, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 ../data/classifier/SubGradientSVM_05_30_16_1en05_False.m ERROR classified: 8.483558e-03, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 ../data/classifier/SubGradientSVM_05_30_1_1en05_False.m ERROR classified: 8.896478e-03, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 *** Testing in ../data/clustering/*.m ../data/clustering/Hierarchical_EuclidianDistance_3.m OK ../data/clustering/KMeans_EuclidianDistance_3.m OK *** Testing in ../data/distance/*.m ../data/distance/BrayCurtisDistance_fnord.m OK ../data/distance/CanberraMetric_fnord.m OK ../data/distance/CanberraWordDistance_60_0_False_DNA_3.m OK ../data/distance/ChebyshewMetric_fnord.m OK ../data/distance/ChiSquareDistance_fnord.m OK ../data/distance/CosineDistance_fnord.m OK ../data/distance/EuclidianDistance_fnord.m OK ../data/distance/GeodesicMetric_fnord.m OK ../data/distance/HammingWordDistance_60_0_False_False_DNA_3.m OK ../data/distance/HammingWordDistance_60_0_False_True_DNA_3.m OK ../data/distance/JensenMetric_fnord.m OK ../data/distance/ManhattanMetric_fnord.m OK ../data/distance/ManhattanWordDistance_60_0_False_DNA_3.m OK ../data/distance/MinkowskiMetric_13.m OK ../data/distance/SparseEuclidianDistance_fnord.m OK ../data/distance/TanimotoDistance_fnord.m OK *** Testing in ../data/distribution/*.m ../data/distribution/HMM_4_60_6_3_0_1en10_False_CUBE_1.m OK ../data/distribution/Histogram_False_60_0_DNA_3.m OK ../data/distribution/LinearHMM_False_60_0_DNA_3.m OK *** Testing in ../data/kernel/*.m ../data/kernel/AUC_15_Gaussian_10.m OK ../data/kernel/Chi2_10_12.m OK ../data/kernel/Combined_3_10_60_LocalAlignmentString_FixedDegreeString_10_True_3_DNA_DNA_60_PolyMatchString_60_10_DNA.m OK ../data/kernel/CommUlongString_60_0_False_False_DNA_3.m OK ../data/kernel/CommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/Const_230.m OK ../data/kernel/Custom_7.m OK ../data/kernel/Diag_230.m OK ../data/kernel/Distance_CanberraMetric_17.m OK ../data/kernel/FixedDegreeString_60_3_DNA.m OK ../data/kernel/GaussianShift_1_2_13.m OK ../data/kernel/Gaussian_13.m OK ../data/kernel/HistogramWordString_60_0_DNA_3_False.m OK ../data/kernel/LinearByte_60_RAWBYTE.m OK ../data/kernel/LinearString_60_DNA.m OK ../data/kernel/LinearWord_fnord.m OK ../data/kernel/Linear_fnord.m OK ../data/kernel/LocalAlignmentString_60_DNA.m OK ../data/kernel/MatchWordString_60_0_False_3_DNA_3.m OK ../data/kernel/PolyMatchString_60_3_False_DNA.m OK ../data/kernel/PolyMatchString_60_3_True_DNA.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_False.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_True.m OK ../data/kernel/Poly_4_6_0_8_3_FK_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_4_6_0_8_3_TOP_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_False_3_False.m OK ../data/kernel/Poly_False_3_True.m OK ../data/kernel/Poly_True_3_False.m OK ../data/kernel/Poly_True_3_True.m OK ../data/kernel/SalzbergWordString_60_0_DNA_3_False.m OK ../data/kernel/Sigmoid_07_10_05.m OK ../data/kernel/Sigmoid_13_10_11.m OK ../data/kernel/SimpleLocalityImprovedString_5_60_7_DNA_5.m OK ../data/kernel/SparseGaussian_13.m OK ../data/kernel/SparseLinear_fnord.m OK ../data/kernel/SparsePoly_3_10_False.m OK ../data/kernel/SparsePoly_3_10_True.m OK ../data/kernel/WeightedCommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/WeightedDegreePositionString_60_1_DNA.m OK ../data/kernel/WeightedDegreePositionString_60_20_DNA.m OK ../data/kernel/WeightedDegreeString_60_1_DNA.m OK ../data/kernel/WeightedDegreeString_60_20_DNA.m OK *** Testing in ../data/preproc/*.m ../data/preproc/LogPlusOne_Gaussian_12.m OK ../data/preproc/NormOne_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_False_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_True_Gaussian_12.m OK ../data/preproc/SortUlongString_60_0_False_DNA_CommUlongString_3_False.m OK ../data/preproc/SortWordString_60_0_False_DNA_CommWordString_3_False.m OK *** Testing in ../data/regression/*.m ../data/regression/KRR_Gaussian_16_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en06_15.m OK ../data/regression/LibSVR_0017_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_023_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_15_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_30_16_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_001.m OK ../data/regression/LibSVR_30_1_15_1en05_Gaussian_001.m OK cd ../examples/python-modular && ( PYTHON=python2.4 PYTHONPATH="/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.4/site-packages" ./check.sh ) running all_classifier.py .. OK running all_clustering.py .. OK running all_distance.py .. OK running all_distribution.py .. OK running all_kernels.py .. OK running all_preproc.py .. OK running all_regression.py .. OK running check_commwordkernel_memleak.py .. OK running numpy_commands.py .. OK running read_svmlight_format.py .. OK running stringfeatures.py .. OK make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python-modular2.4' + /usr/bin/make -C build-python-modular2.5 tests DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python-modular make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python-modular2.5' cd ../testsuite/python-modular && ( PYTHON=python2.5 PYTHONPATH="/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.5/site-packages" ./test_all.sh ) *** Testing in ../data/classifier/*.m ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_16.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_0017_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_023_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_15_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/KNN_EuclidianDistance_1_3.m OK ../data/classifier/LDA_1_01.m OK ../data/classifier/LibLinear_0017_1_1en05_True.m OK ../data/classifier/LibLinear_023_1_1en05_True.m OK ../data/classifier/LibLinear_15_1_1en05_True.m OK ../data/classifier/LibLinear_30_16_1en05_True.m OK ../data/classifier/LibLinear_30_1_1en05_True.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/Perceptron_01_1_1000.m /build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/Classifier.py:833: RuntimeWarning: Perceptron algorithm did not converge after 1000 iterations. return _Classifier.Perceptron_train(*args) OK ../data/classifier/SVMLin_0017_1_1en05_True.m OK ../data/classifier/SVMLin_023_1_1en05_True.m OK ../data/classifier/SVMLin_15_1_1en05_True.m OK ../data/classifier/SVMLin_30_16_1en05_True.m OK ../data/classifier/SVMLin_30_1_1en05_True.m OK ../data/classifier/SVMOcas_0017_1_1en05_False.m OK ../data/classifier/SVMOcas_023_1_1en05_False.m OK ../data/classifier/SVMOcas_15_1_1en05_False.m OK ../data/classifier/SVMOcas_30_16_1en05_False.m ERROR classified: 1.258481e-04, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 ../data/classifier/SVMOcas_30_1_1en05_False.m ERROR classified: 1.258481e-04, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 ../data/classifier/SVMSGD_0017_1_1en05_True.m OK ../data/classifier/SVMSGD_023_1_1en05_True.m OK ../data/classifier/SVMSGD_15_1_1en05_True.m OK ../data/classifier/SVMSGD_30_16_1en05_True.m OK ../data/classifier/SVMSGD_30_1_1en05_True.m OK ../data/classifier/SubGradientSVM_05_0017_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_023_1_1en05_False.m ERROR classified: 3.867812e-03, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 ../data/classifier/SubGradientSVM_05_15_1_1en05_False.m ERROR classified: 1.370000e-01, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 ../data/classifier/SubGradientSVM_05_30_16_1en05_False.m ERROR classified: 8.483558e-03, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 ../data/classifier/SubGradientSVM_05_30_1_1en05_False.m ERROR classified: 8.896478e-03, bias: 0.000000e+00 <--- accuracy: 1.000000e-04 *** Testing in ../data/clustering/*.m ../data/clustering/Hierarchical_EuclidianDistance_3.m OK ../data/clustering/KMeans_EuclidianDistance_3.m OK *** Testing in ../data/distance/*.m ../data/distance/BrayCurtisDistance_fnord.m OK ../data/distance/CanberraMetric_fnord.m OK ../data/distance/CanberraWordDistance_60_0_False_DNA_3.m OK ../data/distance/ChebyshewMetric_fnord.m OK ../data/distance/ChiSquareDistance_fnord.m OK ../data/distance/CosineDistance_fnord.m OK ../data/distance/EuclidianDistance_fnord.m OK ../data/distance/GeodesicMetric_fnord.m OK ../data/distance/HammingWordDistance_60_0_False_False_DNA_3.m OK ../data/distance/HammingWordDistance_60_0_False_True_DNA_3.m OK ../data/distance/JensenMetric_fnord.m OK ../data/distance/ManhattanMetric_fnord.m OK ../data/distance/ManhattanWordDistance_60_0_False_DNA_3.m OK ../data/distance/MinkowskiMetric_13.m OK ../data/distance/SparseEuclidianDistance_fnord.m OK ../data/distance/TanimotoDistance_fnord.m OK *** Testing in ../data/distribution/*.m ../data/distribution/HMM_4_60_6_3_0_1en10_False_CUBE_1.m OK ../data/distribution/Histogram_False_60_0_DNA_3.m OK ../data/distribution/LinearHMM_False_60_0_DNA_3.m OK *** Testing in ../data/kernel/*.m ../data/kernel/AUC_15_Gaussian_10.m OK ../data/kernel/Chi2_10_12.m OK ../data/kernel/Combined_3_10_60_LocalAlignmentString_FixedDegreeString_10_True_3_DNA_DNA_60_PolyMatchString_60_10_DNA.m OK ../data/kernel/CommUlongString_60_0_False_False_DNA_3.m OK ../data/kernel/CommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/Const_230.m OK ../data/kernel/Custom_7.m OK ../data/kernel/Diag_230.m OK ../data/kernel/Distance_CanberraMetric_17.m OK ../data/kernel/FixedDegreeString_60_3_DNA.m OK ../data/kernel/GaussianShift_1_2_13.m OK ../data/kernel/Gaussian_13.m OK ../data/kernel/HistogramWordString_60_0_DNA_3_False.m OK ../data/kernel/LinearByte_60_RAWBYTE.m OK ../data/kernel/LinearString_60_DNA.m OK ../data/kernel/LinearWord_fnord.m OK ../data/kernel/Linear_fnord.m OK ../data/kernel/LocalAlignmentString_60_DNA.m OK ../data/kernel/MatchWordString_60_0_False_3_DNA_3.m OK ../data/kernel/PolyMatchString_60_3_False_DNA.m OK ../data/kernel/PolyMatchString_60_3_True_DNA.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_False.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_True.m OK ../data/kernel/Poly_4_6_0_8_3_FK_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_4_6_0_8_3_TOP_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_False_3_False.m OK ../data/kernel/Poly_False_3_True.m OK ../data/kernel/Poly_True_3_False.m OK ../data/kernel/Poly_True_3_True.m OK ../data/kernel/SalzbergWordString_60_0_DNA_3_False.m OK ../data/kernel/Sigmoid_07_10_05.m OK ../data/kernel/Sigmoid_13_10_11.m OK ../data/kernel/SimpleLocalityImprovedString_5_60_7_DNA_5.m OK ../data/kernel/SparseGaussian_13.m OK ../data/kernel/SparseLinear_fnord.m OK ../data/kernel/SparsePoly_3_10_False.m OK ../data/kernel/SparsePoly_3_10_True.m OK ../data/kernel/WeightedCommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/WeightedDegreePositionString_60_1_DNA.m OK ../data/kernel/WeightedDegreePositionString_60_20_DNA.m OK ../data/kernel/WeightedDegreeString_60_1_DNA.m OK ../data/kernel/WeightedDegreeString_60_20_DNA.m OK *** Testing in ../data/preproc/*.m ../data/preproc/LogPlusOne_Gaussian_12.m OK ../data/preproc/NormOne_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_False_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_True_Gaussian_12.m OK ../data/preproc/SortUlongString_60_0_False_DNA_CommUlongString_3_False.m OK ../data/preproc/SortWordString_60_0_False_DNA_CommWordString_3_False.m OK *** Testing in ../data/regression/*.m ../data/regression/KRR_Gaussian_16_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en06_15.m OK ../data/regression/LibSVR_0017_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_023_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_15_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_30_16_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_001.m OK ../data/regression/LibSVR_30_1_15_1en05_Gaussian_001.m OK cd ../examples/python-modular && ( PYTHON=python2.5 PYTHONPATH="/build/buildd/shogun-0.6.7/debian/shogun-python-modular/usr/lib/python2.5/site-packages" ./check.sh ) running all_classifier.py .. OK running all_clustering.py .. OK running all_distance.py .. OK running all_distribution.py .. OK running all_kernels.py .. OK running all_preproc.py .. OK running all_regression.py .. OK running check_commwordkernel_memleak.py .. OK running numpy_commands.py .. OK running read_svmlight_format.py .. OK running stringfeatures.py .. OK make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python-modular2.5' dh_pycentral -pshogun-python-modular diff debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun Identical files : ['Classifier.py', 'Clustering.py', 'Distance.py', 'Distribution.py', 'Evaluation.py', 'Features.py', 'Kernel.py', 'Library.py', 'PreProc.py', 'Regression.py', 'Structure.py', '__init__.py'] Differing files : ['_Classifier.so', '_Clustering.so', '_Distance.so', '_Distribution.so', '_Evaluation.so', '_Features.so', '_Kernel.so', '_Library.so', '_PreProc.so', '_Regression.so', '_Structure.so'] touch debian/stamp-install-python-modular dh_installdirs -pshogun-python set -x; /usr/bin/make -C build-python2.4 install DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python; /usr/bin/make -C build-python2.5 install DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python; + /usr/bin/make -C build-python2.4 install DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python2.4' install -d -m755 /build/buildd/shogun-0.6.7/debian/shogun-python/usr/lib/python2.4/site-packages install -m755 sg.so /build/buildd/shogun-0.6.7/debian/shogun-python/usr/lib/python2.4/site-packages make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python2.4' + /usr/bin/make -C build-python2.5 install DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python2.5' install -d -m755 /build/buildd/shogun-0.6.7/debian/shogun-python/usr/lib/python2.5/site-packages install -m755 sg.so /build/buildd/shogun-0.6.7/debian/shogun-python/usr/lib/python2.5/site-packages make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python2.5' set -x; /usr/bin/make -C build-python2.4 tests DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python; /usr/bin/make -C build-python2.5 tests DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python; + /usr/bin/make -C build-python2.4 tests DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python2.4' cd ../testsuite/python && ( PYTHON=python2.4 PYTHONPATH="/build/buildd/shogun-0.6.7/debian/shogun-python/usr/lib/python2.4/site-packages" ./test_all.sh ) *** Testing in ../data/classifier/*.m ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_16.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_0017_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_023_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_15_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/KNN_EuclidianDistance_1_3.m OK ../data/classifier/LDA_1_01.m OK ../data/classifier/LibLinear_0017_1_1en05_True.m OK ../data/classifier/LibLinear_023_1_1en05_True.m OK ../data/classifier/LibLinear_15_1_1en05_True.m OK ../data/classifier/LibLinear_30_16_1en05_True.m OK ../data/classifier/LibLinear_30_1_1en05_True.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/Perceptron_01_1_1000.m /build/buildd/shogun-0.6.7/testsuite/python/classifier.py:45: RuntimeWarning: Perceptron algorithm did not converge after 1000 iterations. sg('train_classifier') OK ../data/classifier/SVMLin_0017_1_1en05_True.m OK ../data/classifier/SVMLin_023_1_1en05_True.m OK ../data/classifier/SVMLin_15_1_1en05_True.m OK ../data/classifier/SVMLin_30_16_1en05_True.m OK ../data/classifier/SVMLin_30_1_1en05_True.m OK ../data/classifier/SVMOcas_0017_1_1en05_False.m OK ../data/classifier/SVMOcas_023_1_1en05_False.m OK ../data/classifier/SVMOcas_15_1_1en05_False.m OK ../data/classifier/SVMOcas_30_16_1en05_False.m OK ../data/classifier/SVMOcas_30_1_1en05_False.m OK ../data/classifier/SVMSGD_0017_1_1en05_True.m OK ../data/classifier/SVMSGD_023_1_1en05_True.m OK ../data/classifier/SVMSGD_15_1_1en05_True.m OK ../data/classifier/SVMSGD_30_16_1en05_True.m OK ../data/classifier/SVMSGD_30_1_1en05_True.m OK ../data/classifier/SubGradientSVM_05_0017_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_023_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_15_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_30_16_1en05_False.m OK ../data/classifier/SubGradientSVM_05_30_1_1en05_False.m OK *** Testing in ../data/clustering/*.m ../data/clustering/Hierarchical_EuclidianDistance_3.m OK ../data/clustering/KMeans_EuclidianDistance_3.m OK *** Testing in ../data/distance/*.m ../data/distance/BrayCurtisDistance_fnord.m OK ../data/distance/CanberraMetric_fnord.m OK ../data/distance/CanberraWordDistance_60_0_False_DNA_3.m OK ../data/distance/ChebyshewMetric_fnord.m OK ../data/distance/ChiSquareDistance_fnord.m OK ../data/distance/CosineDistance_fnord.m OK ../data/distance/EuclidianDistance_fnord.m OK ../data/distance/GeodesicMetric_fnord.m OK ../data/distance/HammingWordDistance_60_0_False_False_DNA_3.m OK ../data/distance/HammingWordDistance_60_0_False_True_DNA_3.m OK ../data/distance/JensenMetric_fnord.m OK ../data/distance/ManhattanMetric_fnord.m OK ../data/distance/ManhattanWordDistance_60_0_False_DNA_3.m OK ../data/distance/MinkowskiMetric_13.m OK ../data/distance/SparseEuclidianDistance_fnord.m OK ../data/distance/TanimotoDistance_fnord.m OK *** Testing in ../data/distribution/*.m ../data/distribution/HMM_4_60_6_3_0_1en10_False_CUBE_1.m OK ../data/distribution/Histogram_False_60_0_DNA_3.m OK ../data/distribution/LinearHMM_False_60_0_DNA_3.m OK *** Testing in ../data/kernel/*.m ../data/kernel/AUC_15_Gaussian_10.m OK ../data/kernel/Chi2_10_12.m OK ../data/kernel/Combined_3_10_60_LocalAlignmentString_FixedDegreeString_10_True_3_DNA_DNA_60_PolyMatchString_60_10_DNA.m OK ../data/kernel/CommUlongString_60_0_False_False_DNA_3.m OK ../data/kernel/CommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/Const_230.m OK ../data/kernel/Custom_7.m OK ../data/kernel/Diag_230.m OK ../data/kernel/Distance_CanberraMetric_17.m OK ../data/kernel/FixedDegreeString_60_3_DNA.m OK ../data/kernel/GaussianShift_1_2_13.m OK ../data/kernel/Gaussian_13.m OK ../data/kernel/HistogramWordString_60_0_DNA_3_False.m OK ../data/kernel/LinearByte_60_RAWBYTE.m OK ../data/kernel/LinearString_60_DNA.m OK ../data/kernel/LinearWord_fnord.m OK ../data/kernel/Linear_fnord.m OK ../data/kernel/LocalAlignmentString_60_DNA.m OK ../data/kernel/MatchWordString_60_0_False_3_DNA_3.m OK ../data/kernel/PolyMatchString_60_3_False_DNA.m OK ../data/kernel/PolyMatchString_60_3_True_DNA.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_False.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_True.m OK ../data/kernel/Poly_4_6_0_8_3_FK_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_4_6_0_8_3_TOP_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_False_3_False.m OK ../data/kernel/Poly_False_3_True.m OK ../data/kernel/Poly_True_3_False.m OK ../data/kernel/Poly_True_3_True.m OK ../data/kernel/SalzbergWordString_60_0_DNA_3_False.m OK ../data/kernel/Sigmoid_07_10_05.m OK ../data/kernel/Sigmoid_13_10_11.m OK ../data/kernel/SimpleLocalityImprovedString_5_60_7_DNA_5.m OK ../data/kernel/SparseGaussian_13.m OK ../data/kernel/SparseLinear_fnord.m OK ../data/kernel/SparsePoly_3_10_False.m OK ../data/kernel/SparsePoly_3_10_True.m OK ../data/kernel/WeightedCommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/WeightedDegreePositionString_60_1_DNA.m OK ../data/kernel/WeightedDegreePositionString_60_20_DNA.m OK ../data/kernel/WeightedDegreeString_60_1_DNA.m OK ../data/kernel/WeightedDegreeString_60_20_DNA.m OK *** Testing in ../data/preproc/*.m ../data/preproc/LogPlusOne_Gaussian_12.m OK ../data/preproc/NormOne_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_False_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_True_Gaussian_12.m OK ../data/preproc/SortUlongString_60_0_False_DNA_CommUlongString_3_False.m OK ../data/preproc/SortWordString_60_0_False_DNA_CommWordString_3_False.m OK *** Testing in ../data/regression/*.m ../data/regression/KRR_Gaussian_16_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en06_15.m OK ../data/regression/LibSVR_0017_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_023_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_15_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_30_16_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_001.m OK ../data/regression/LibSVR_30_1_15_1en05_Gaussian_001.m OK cd ../examples/python && ( PYTHON=python2.4 PYTHONPATH="/build/buildd/shogun-0.6.7/debian/shogun-python/usr/lib/python2.4/site-packages" ./check.sh ) running all_classifier.py .. OK running all_clustering.py .. OK running all_distance.py .. OK running all_distribution.py .. OK running all_kernels.py .. OK running all_preproc.py .. OK running all_regression.py .. OK running test_mkl.py .. ERROR make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python2.4' + /usr/bin/make -C build-python2.5 tests DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-python make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-python2.5' cd ../testsuite/python && ( PYTHON=python2.5 PYTHONPATH="/build/buildd/shogun-0.6.7/debian/shogun-python/usr/lib/python2.5/site-packages" ./test_all.sh ) *** Testing in ../data/classifier/*.m ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_16.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_0017_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_023_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_15_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/KNN_EuclidianDistance_1_3.m OK ../data/classifier/LDA_1_01.m OK ../data/classifier/LibLinear_0017_1_1en05_True.m OK ../data/classifier/LibLinear_023_1_1en05_True.m OK ../data/classifier/LibLinear_15_1_1en05_True.m OK ../data/classifier/LibLinear_30_16_1en05_True.m OK ../data/classifier/LibLinear_30_1_1en05_True.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/Perceptron_01_1_1000.m /build/buildd/shogun-0.6.7/testsuite/python/classifier.py:45: RuntimeWarning: Perceptron algorithm did not converge after 1000 iterations. sg('train_classifier') OK ../data/classifier/SVMLin_0017_1_1en05_True.m OK ../data/classifier/SVMLin_023_1_1en05_True.m OK ../data/classifier/SVMLin_15_1_1en05_True.m OK ../data/classifier/SVMLin_30_16_1en05_True.m OK ../data/classifier/SVMLin_30_1_1en05_True.m OK ../data/classifier/SVMOcas_0017_1_1en05_False.m OK ../data/classifier/SVMOcas_023_1_1en05_False.m OK ../data/classifier/SVMOcas_15_1_1en05_False.m OK ../data/classifier/SVMOcas_30_16_1en05_False.m OK ../data/classifier/SVMOcas_30_1_1en05_False.m OK ../data/classifier/SVMSGD_0017_1_1en05_True.m OK ../data/classifier/SVMSGD_023_1_1en05_True.m OK ../data/classifier/SVMSGD_15_1_1en05_True.m OK ../data/classifier/SVMSGD_30_16_1en05_True.m OK ../data/classifier/SVMSGD_30_1_1en05_True.m OK ../data/classifier/SubGradientSVM_05_0017_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_023_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_15_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_30_16_1en05_False.m OK ../data/classifier/SubGradientSVM_05_30_1_1en05_False.m OK *** Testing in ../data/clustering/*.m ../data/clustering/Hierarchical_EuclidianDistance_3.m OK ../data/clustering/KMeans_EuclidianDistance_3.m OK *** Testing in ../data/distance/*.m ../data/distance/BrayCurtisDistance_fnord.m OK ../data/distance/CanberraMetric_fnord.m OK ../data/distance/CanberraWordDistance_60_0_False_DNA_3.m OK ../data/distance/ChebyshewMetric_fnord.m OK ../data/distance/ChiSquareDistance_fnord.m OK ../data/distance/CosineDistance_fnord.m OK ../data/distance/EuclidianDistance_fnord.m OK ../data/distance/GeodesicMetric_fnord.m OK ../data/distance/HammingWordDistance_60_0_False_False_DNA_3.m OK ../data/distance/HammingWordDistance_60_0_False_True_DNA_3.m OK ../data/distance/JensenMetric_fnord.m OK ../data/distance/ManhattanMetric_fnord.m OK ../data/distance/ManhattanWordDistance_60_0_False_DNA_3.m OK ../data/distance/MinkowskiMetric_13.m OK ../data/distance/SparseEuclidianDistance_fnord.m OK ../data/distance/TanimotoDistance_fnord.m OK *** Testing in ../data/distribution/*.m ../data/distribution/HMM_4_60_6_3_0_1en10_False_CUBE_1.m OK ../data/distribution/Histogram_False_60_0_DNA_3.m OK ../data/distribution/LinearHMM_False_60_0_DNA_3.m OK *** Testing in ../data/kernel/*.m ../data/kernel/AUC_15_Gaussian_10.m OK ../data/kernel/Chi2_10_12.m OK ../data/kernel/Combined_3_10_60_LocalAlignmentString_FixedDegreeString_10_True_3_DNA_DNA_60_PolyMatchString_60_10_DNA.m OK ../data/kernel/CommUlongString_60_0_False_False_DNA_3.m OK ../data/kernel/CommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/Const_230.m OK ../data/kernel/Custom_7.m OK ../data/kernel/Diag_230.m OK ../data/kernel/Distance_CanberraMetric_17.m OK ../data/kernel/FixedDegreeString_60_3_DNA.m OK ../data/kernel/GaussianShift_1_2_13.m OK ../data/kernel/Gaussian_13.m OK ../data/kernel/HistogramWordString_60_0_DNA_3_False.m OK ../data/kernel/LinearByte_60_RAWBYTE.m OK ../data/kernel/LinearString_60_DNA.m OK ../data/kernel/LinearWord_fnord.m OK ../data/kernel/Linear_fnord.m OK ../data/kernel/LocalAlignmentString_60_DNA.m OK ../data/kernel/MatchWordString_60_0_False_3_DNA_3.m OK ../data/kernel/PolyMatchString_60_3_False_DNA.m OK ../data/kernel/PolyMatchString_60_3_True_DNA.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_False.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_True.m OK ../data/kernel/Poly_4_6_0_8_3_FK_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_4_6_0_8_3_TOP_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_False_3_False.m OK ../data/kernel/Poly_False_3_True.m OK ../data/kernel/Poly_True_3_False.m OK ../data/kernel/Poly_True_3_True.m OK ../data/kernel/SalzbergWordString_60_0_DNA_3_False.m OK ../data/kernel/Sigmoid_07_10_05.m OK ../data/kernel/Sigmoid_13_10_11.m OK ../data/kernel/SimpleLocalityImprovedString_5_60_7_DNA_5.m OK ../data/kernel/SparseGaussian_13.m OK ../data/kernel/SparseLinear_fnord.m OK ../data/kernel/SparsePoly_3_10_False.m OK ../data/kernel/SparsePoly_3_10_True.m OK ../data/kernel/WeightedCommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/WeightedDegreePositionString_60_1_DNA.m OK ../data/kernel/WeightedDegreePositionString_60_20_DNA.m OK ../data/kernel/WeightedDegreeString_60_1_DNA.m OK ../data/kernel/WeightedDegreeString_60_20_DNA.m OK *** Testing in ../data/preproc/*.m ../data/preproc/LogPlusOne_Gaussian_12.m OK ../data/preproc/NormOne_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_False_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_True_Gaussian_12.m OK ../data/preproc/SortUlongString_60_0_False_DNA_CommUlongString_3_False.m OK ../data/preproc/SortWordString_60_0_False_DNA_CommWordString_3_False.m OK *** Testing in ../data/regression/*.m ../data/regression/KRR_Gaussian_16_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en06_15.m OK ../data/regression/LibSVR_0017_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_023_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_15_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_30_16_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_001.m OK ../data/regression/LibSVR_30_1_15_1en05_Gaussian_001.m OK cd ../examples/python && ( PYTHON=python2.5 PYTHONPATH="/build/buildd/shogun-0.6.7/debian/shogun-python/usr/lib/python2.5/site-packages" ./check.sh ) running all_classifier.py .. OK running all_clustering.py .. OK running all_distance.py .. OK running all_distribution.py .. OK running all_kernels.py .. OK running all_preproc.py .. OK running all_regression.py .. OK running test_mkl.py .. ERROR make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-python2.5' dh_pycentral -pshogun-python diff debian/shogun-python/usr/lib/python2.5/site-packages debian/shogun-python/usr/lib/python2.4/site-packages Differing files : ['sg.so'] touch debian/stamp-install-python dh_installdirs -pshogun-readline /usr/bin/make -C build-readline install DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-readline make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-readline' install -d -m755 /build/buildd/shogun-0.6.7/debian/shogun-readline/usr/bin install -m755 shogun /build/buildd/shogun-0.6.7/debian/shogun-readline/usr/bin make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-readline' /usr/bin/make -C build-readline tests DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-readline make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-readline' cd ../testsuite/cmdline && ( PATH="/build/buildd/shogun-0.6.7/debian/shogun-readline/usr/bin" ./test_all.sh ) cd ../examples/cmdline && ( PATH="/build/buildd/shogun-0.6.7/debian/shogun-readline/usr/bin" ./check.sh ) running all_classifier.sg .. ERROR running all_clustering.sg .. OK running all_distance.sg .. OK running all_distribution.sg .. OK running all_kernels.sg .. OK running all_preproc.sg .. OK running all_regression.sg .. ERROR running libsvm.sg .. OK make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-readline' touch debian/stamp-install-readline dh_installdirs -pshogun-octave-modular /usr/bin/make -C build-octave-modular install \ DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-octave-modular make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-octave-modular' install -d -m755 "/build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun" install -m755 ./classifier/Classifier.oct ./clustering/Clustering.oct ./distance/Distance.oct ./distributions/Distribution.oct ./evaluation/Evaluation.oct ./features/Features.oct ./kernel/Kernel.oct ./lib/Library.oct ./preproc/PreProc.oct ./regression/Regression.oct ./structure/Structure.oct "/build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun" echo '%Initialize shogun by loading all of its modules' > "/build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/init_shogun.m" for i in ./classifier/Classifier.oct ./clustering/Clustering.oct ./distance/Distance.oct ./distributions/Distribution.oct ./evaluation/Evaluation.oct ./features/Features.oct ./kernel/Kernel.oct ./lib/Library.oct ./preproc/PreProc.oct ./regression/Regression.oct ./structure/Structure.oct ; do echo $i | sed -e 's=.*/==' -e 's/\.oct/;/' >>/build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/init_shogun.m; done make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-octave-modular' octave-depends /usr/bin/make -C build-octave-modular tests \ DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-octave-modular make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-octave-modular' cd ../testsuite/octave-modular && ( OCTAVE_LOADPATH="/build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun:" ./test_all.sh ) *** Testing in ../data/classifier/*.m ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_16.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_0017_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_023_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_15_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA_True.m *** glibc detected *** octave: double free or corruption (fasttop): 0x11aecb50 *** ======= Backtrace: ========= /lib/libc.so.6[0xd554228] /lib/libc.so.6(cfree+0xcc)[0xd55610c] /usr/lib/libstdc++.so.6(_ZdlPv+0x2c)[0xd779a6c] /usr/lib/libstdc++.so.6(_ZNSs4_Rep10_M_destroyERKSaIcE+0x24)[0xd745be4] /usr/lib/libstdc++.so.6(_ZNSsD1Ev+0x84)[0xd748154] /lib/libc.so.6(exit+0xfc)[0xd50dc9c] /usr/lib/octave-3.0.1/liboctinterp.so[0xf95fa2c] /usr/lib/octave-3.0.1/liboctinterp.so(octave_main+0xed0)[0xf8f7910] octave(main+0x14)[0x10001b84] /lib/libc.so.6[0xd4f1be4] /lib/libc.so.6[0xd4f1da0] ======= Memory map: ======== 00100000-00103000 r-xp 00100000 00:00 0 0bd56000-0be16000 r-xp 00000000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be16000-0be25000 ---p 000c0000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be25000-0be28000 r--p 000bf000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be28000-0be2c000 rw-p 000c2000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be2c000-0be2e000 rw-p 0be2c000 00:00 0 0be3e000-0bed6000 r-xp 00000000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bed6000-0bee5000 ---p 00098000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee5000-0bee8000 r--p 00097000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee8000-0beeb000 rw-p 0009a000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0beeb000-0beed000 rw-p 0beeb000 00:00 0 0befd000-0bf9a000 r-xp 00000000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bf9a000-0bfaa000 ---p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfaa000-0bfad000 r--p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfad000-0bfb1000 rw-p 000a0000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfb1000-0bfb4000 rw-p 0bfb1000 00:00 0 0bfc4000-0c201000 r-xp 00000000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c201000-0c210000 ---p 0023d000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c210000-0c216000 r--p 0023c000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c216000-0c223000 rw-p 00242000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c223000-0c225000 rw-p 0c223000 00:00 0 0c235000-0c457000 r-xp 00000000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c457000-0c466000 ---p 00222000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c466000-0c46e000 r--p 00221000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c46e000-0c47a000 rw-p 00229000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c47a000-0c486000 rw-p 0c47a000 00:00 0 0c496000-0c7a4000 r-xp 00000000 09:00 4816927 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/usr/lib/libcxsparse.so.3.1.0 0e9e6000-0e9e7000 r--p 00035000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e7000-0e9e8000 rw-p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9f8000-0ea05000 r-xp 00000000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea05000-0ea14000 ---p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea14000-0ea15000 r--p 0000c000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea15000-0ea16000 rw-p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea26000-0eaf7000 r-xp 00000000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eaf7000-0eb07000 ---p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb07000-0eb09000 r--p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb09000-0eb0a000 rw-p 000d3000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb1a000-0eb22000 r-xp 00000000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb22000-0eb31000 ---p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb31000-0eb32000 r--p 00007000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb32000-0eb33000 rw-p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb43000-0eb4e000 r-xp 00000000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb4e000-0eb5d000 ---p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5d000-0eb5e000 r--p 0000a000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5e000-0eb5f000 rw-p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb6f000-0eb79000 r-xp 00000000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb79000-0eb88000 ---p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb88000-0eb89000 r--p 00009000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb89000-0eb8a000 rw-p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb9a000-0ec54000 r-xp 00000000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec54000-0ec64000 ---p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec64000-0ec67000 r--p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec67000-0ec68000 rw-p 000bd000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec78000-0ecce000 r-xp 00000000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecce000-0ecdd000 ---p 00056000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdd000-0ecdf000 r--p 00055000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdf000-0ece0000 rw-p 00057000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ece0000-0ece2000 rw-p 0ece0000 00:00 0 0ecf2000-0f584000 r-xp 00000000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f584000-0f594000 ---p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f594000-0f59f000 r--p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f59f000-0f5a3000 rw-p 0089d000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f5a3000-0f5a7000 rw-p 0f5a3000 00:00 0 0f5b7000-0ff89000 r-xp 00000000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff89000-0ff98000 ---p 009d2000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff98000-0ffbc000 r--p 009d1000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffbc000-0ffc3000 rw-p 009f5000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffc3000-0ffc5000 rw-p 0ffc3000 00:00 0 0ffd5000-0ffdf000 r-xp 00000000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffdf000-0ffee000 ---p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffee000-0ffef000 r--p 00009000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffef000-0fff0000 rw-p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 10000000-10002000 r-xp 00000000 09:00 4492233 /usr/bin/octave-3.0.1 10012000-10013000 r--p 00002000 09:00 4492233 /usr/bin/octave-3.0.1 10013000-10014000 rw-p 00003000 09:00 4492233 /usr/bin/octave-3.0.1 10014000-122c7000 rwxp 10014000 00:00 0 [heap] 40000000-4001f000 r-xp 00000000 09:00 4490521 /lib/ld-2.9.so 4001f000-40023000 rw-p 4001f000 00:00 0 40027000-4002d000 rw-p 40027000 00:00 0 4002f000-40030000 r--p 0001f000 09:00 4490521 /lib/ld-2.9.so 40030000-40031000 rw-p 00020000 09:00 4490521 /lib/ld-2.9.so 40031000-403de000 rw-p 40031000 00:00 0 ffbcb000-ffbe0000 rw-p ffbcb000 00:00 0 [stack] panic: Aborted -- stopping myself... attempting to save variables to `octave-core'... save to `octave-core' complete Aborted OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA_True.m *** glibc detected *** octave: double free or corruption (fasttop): 0x11aed498 *** ======= Backtrace: ========= /lib/libc.so.6[0xd554228] /lib/libc.so.6(cfree+0xcc)[0xd55610c] /usr/lib/libstdc++.so.6(_ZdlPv+0x2c)[0xd779a6c] /usr/lib/libstdc++.so.6(_ZNSs4_Rep10_M_destroyERKSaIcE+0x24)[0xd745be4] /usr/lib/libstdc++.so.6(_ZNSsD1Ev+0x84)[0xd748154] /lib/libc.so.6(exit+0xfc)[0xd50dc9c] /usr/lib/octave-3.0.1/liboctinterp.so[0xf95fa2c] /usr/lib/octave-3.0.1/liboctinterp.so(octave_main+0xed0)[0xf8f7910] octave(main+0x14)[0x10001b84] /lib/libc.so.6[0xd4f1be4] /lib/libc.so.6[0xd4f1da0] ======= Memory map: ======== 00100000-00103000 r-xp 00100000 00:00 0 0bd56000-0be16000 r-xp 00000000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be16000-0be25000 ---p 000c0000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be25000-0be28000 r--p 000bf000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be28000-0be2c000 rw-p 000c2000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be2c000-0be2e000 rw-p 0be2c000 00:00 0 0be3e000-0bed6000 r-xp 00000000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bed6000-0bee5000 ---p 00098000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee5000-0bee8000 r--p 00097000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee8000-0beeb000 rw-p 0009a000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0beeb000-0beed000 rw-p 0beeb000 00:00 0 0befd000-0bf9a000 r-xp 00000000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bf9a000-0bfaa000 ---p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfaa000-0bfad000 r--p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfad000-0bfb1000 rw-p 000a0000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfb1000-0bfb4000 rw-p 0bfb1000 00:00 0 0bfc4000-0c201000 r-xp 00000000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c201000-0c210000 ---p 0023d000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c210000-0c216000 r--p 0023c000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c216000-0c223000 rw-p 00242000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c223000-0c225000 rw-p 0c223000 00:00 0 0c235000-0c457000 r-xp 00000000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c457000-0c466000 ---p 00222000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c466000-0c46e000 r--p 00221000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c46e000-0c47a000 rw-p 00229000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c47a000-0c486000 rw-p 0c47a000 00:00 0 0c496000-0c7a4000 r-xp 00000000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7a4000-0c7b3000 ---p 0030e000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7b3000-0c7bb000 r--p 0030d000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7bb000-0c7cb000 rw-p 00315000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7cb000-0c7cd000 rw-p 0c7cb000 00:00 0 0c7dd000-0c848000 r-xp 00000000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c848000-0c857000 ---p 0006b000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c857000-0c859000 r--p 0006a000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c859000-0c85b000 rw-p 0006c000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c85b000-0c85d000 rw-p 0c85b000 00:00 0 0c86d000-0c941000 r-xp 00000000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c941000-0c951000 ---p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c951000-0c954000 r--p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c954000-0c958000 rw-p 000d7000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c958000-0c95b000 rw-p 0c958000 00:00 0 0c96b000-0ca41000 r-xp 00000000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca41000-0ca51000 ---p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca51000-0ca54000 r--p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca54000-0ca5a000 rw-p 000d9000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca5a000-0ca5c000 rw-p 0ca5a000 00:00 0 0ca6c000-0cae8000 r-xp 00000000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cae8000-0caf8000 ---p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0caf8000-0cafa000 r--p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafa000-0cafd000 rw-p 0007e000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafd000-0caff000 rw-p 0cafd000 00:00 0 0cb0f000-0d0ac000 r-xp 00000000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0ac000-0d0bb000 ---p 0059d000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0bb000-0d0c1000 r--p 0059c000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0c1000-0d0c4000 rw-p 005a2000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0d4000-0d0f5000 r-xp 00000000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d0f5000-0d105000 ---p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d105000-0d106000 r--p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d106000-0d107000 rw-p 00022000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d117000-0d139000 r-xp 00000000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d139000-0d148000 ---p 00022000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d148000-0d14a000 r--p 00021000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d14a000-0d14b000 rw-p 00023000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d15b000-0d17d000 r-xp 00000000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d17d000-0d18d000 ---p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18d000-0d18e000 r--p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18e000-0d18f000 rw-p 00023000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d19f000-0d2dc000 r-xp 00000000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2dc000-0d2eb000 ---p 0013d000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2eb000-0d2f0000 r--p 0013c000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f0000-0d2f6000 rw-p 00141000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f6000-0d2f9000 rw-p 0d2f6000 00:00 0 0d309000-0d323000 r-xp 00000000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d323000-0d332000 ---p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d332000-0d333000 r--p 00019000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d333000-0d334000 rw-p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d344000-0d351000 r-xp 00000000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d351000-0d360000 ---p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d360000-0d361000 r--p 0000c000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d361000-0d362000 rw-p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d372000-0d387000 r-xp 00000000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d387000-0d396000 ---p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d396000-0d397000 r--p 00014000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d397000-0d398000 rw-p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d3a8000-0d3bb000 r-xp 00000000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3bb000-0d3cb000 ---p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cb000-0d3cc000 r--p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cc000-0d3cd000 rw-p 00014000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3dd000-0d3e9000 r-xp 00000000 09:00 4490531 /lib/libnss_files-2.9.so 0d3e9000-0d3f8000 ---p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f8000-0d3f9000 r--p 0000b000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f9000-0d3fa000 rw-p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d40a000-0d415000 r-xp 00000000 09:00 4490533 /lib/libnss_nis-2.9.so 0d415000-0d424000 ---p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d424000-0d425000 r--p 0000a000 09:00 4490533 /lib/libnss_nis-2.9.so 0d425000-0d426000 rw-p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d436000-0d44d000 r-xp 00000000 09:00 4490528 /lib/libnsl-2.9.so 0d44d000-0d45c000 ---p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45c000-0d45d000 r--p 00016000 09:00 4490528 /lib/libnsl-2.9.so 0d45d000-0d45e000 rw-p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45e000-0d460000 rw-p 0d45e000 00:00 0 0d470000-0d478000 r-xp 00000000 09:00 4490529 /lib/libnss_compat-2.9.so 0d478000-0d487000 ---p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d487000-0d488000 r--p 00007000 09:00 4490529 /lib/libnss_compat-2.9.so 0d488000-0d489000 rw-p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d499000-0d4b0000 r-xp 00000000 09:00 4490535 /lib/libpthread-2.9.so 0d4b0000-0d4bf000 ---p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4bf000-0d4c0000 r--p 00016000 09:00 4490535 /lib/libpthread-2.9.so 0d4c0000-0d4c1000 rw-p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4c1000-0d4c3000 rw-p 0d4c1000 00:00 0 0d4d3000-0d636000 r-xp 00000000 09:00 4490523 /lib/libc-2.9.so 0d636000-0d646000 ---p 00163000 09:00 4490523 /lib/libc-2.9.so 0d646000-0d64a000 r--p 00163000 09:00 4490523 /lib/libc-2.9.so 0d64a000-0d64b000 rw-p 00167000 09:00 4490523 /lib/libc-2.9.so 0d64b000-0d64e000 rw-p 0d64b000 00:00 0 0d65e000-0d674000 r-xp 00000000 09:00 4491671 /lib/libgcc_s.so.1 0d674000-0d683000 ---p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d683000-0d684000 r--p 00015000 09:00 4491671 /lib/libgcc_s.so.1 0d684000-0d685000 rw-p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d695000-0d7b1000 r-xp 00000000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7b1000-0d7c1000 ---p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c1000-0d7c5000 r--p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c5000-0d7c7000 rw-p 00120000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c7000-0d7cc000 rw-p 0d7c7000 00:00 0 0d7dc000-0d885000 r-xp 00000000 09:00 4490527 /lib/libm-2.9.so 0d885000-0d895000 ---p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d895000-0d898000 r--p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d898000-0d899000 rw-p 000ac000 09:00 4490527 /lib/libm-2.9.so 0d8a9000-0d965000 r-xp 00000000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d965000-0d974000 ---p 000bc000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d974000-0d976000 r--p 000bb000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d976000-0d977000 rw-p 000bd000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d987000-0d99c000 r-xp 00000000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d99c000-0d9ab000 ---p 00015000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9ab000-0d9ac000 rw-p 00014000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9bc000-0daf8000 r-xp 00000000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0daf8000-0db08000 ---p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db08000-0db0f000 rw-p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db1f000-0db22000 r-xp 00000000 09:00 4490526 /lib/libdl-2.9.so 0db22000-0db31000 ---p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db31000-0db32000 r--p 00002000 09:00 4490526 /lib/libdl-2.9.so 0db32000-0db33000 rw-p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db43000-0db7b000 r-xp 00000000 09:00 4490518 /lib/libncurses.so.5.7 0db7b000-0db8b000 ---p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8b000-0db8d000 r--p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8d000-0db8e000 rw-p 0003a000 09:00 4490518 /lib/libncurses.so.5.7 0db9e000-0dbd9000 r-xp 00000000 09:00 4491902 /lib/libreadline.so.5.2 0dbd9000-0dbe8000 ---p 0003b000 09:00 4491902 /lib/libreadline.so.5.2 0dbe8000-0dbed000 rw-p 0003a000 09:00 4491902 /lib/libreadline.so.5.2 0dbed000-0dbee000 rw-p 0dbed000 00:00 0 0dbfe000-0dc97000 r-xp 00000000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dc97000-0dca7000 ---p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dca7000-0dcac000 r--p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcac000-0dcad000 rw-p 0009e000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcbd000-0e295000 r-xp 00000000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e295000-0e2a4000 ---p 005d8000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2a4000-0e2ab000 r--p 005d7000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2ab000-0e2ae000 rw-p 005de000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2be000-0e86a000 r-xp 00000000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e86a000-0e879000 ---p 005ac000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e879000-0e881000 r--p 005ab000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e881000-0e884000 rw-p 005b3000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e884000-0e991000 rw-p 0e884000 00:00 0 0e9a1000-0e9d7000 r-xp 00000000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9d7000-0e9e6000 ---p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e6000-0e9e7000 r--p 00035000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e7000-0e9e8000 rw-p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9f8000-0ea05000 r-xp 00000000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea05000-0ea14000 ---p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea14000-0ea15000 r--p 0000c000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea15000-0ea16000 rw-p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea26000-0eaf7000 r-xp 00000000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eaf7000-0eb07000 ---p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb07000-0eb09000 r--p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb09000-0eb0a000 rw-p 000d3000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb1a000-0eb22000 r-xp 00000000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb22000-0eb31000 ---p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb31000-0eb32000 r--p 00007000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb32000-0eb33000 rw-p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb43000-0eb4e000 r-xp 00000000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb4e000-0eb5d000 ---p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5d000-0eb5e000 r--p 0000a000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5e000-0eb5f000 rw-p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb6f000-0eb79000 r-xp 00000000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb79000-0eb88000 ---p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb88000-0eb89000 r--p 00009000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb89000-0eb8a000 rw-p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb9a000-0ec54000 r-xp 00000000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec54000-0ec64000 ---p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec64000-0ec67000 r--p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec67000-0ec68000 rw-p 000bd000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec78000-0ecce000 r-xp 00000000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecce000-0ecdd000 ---p 00056000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdd000-0ecdf000 r--p 00055000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdf000-0ece0000 rw-p 00057000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ece0000-0ece2000 rw-p 0ece0000 00:00 0 0ecf2000-0f584000 r-xp 00000000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f584000-0f594000 ---p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f594000-0f59f000 r--p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f59f000-0f5a3000 rw-p 0089d000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f5a3000-0f5a7000 rw-p 0f5a3000 00:00 0 0f5b7000-0ff89000 r-xp 00000000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff89000-0ff98000 ---p 009d2000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff98000-0ffbc000 r--p 009d1000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffbc000-0ffc3000 rw-p 009f5000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffc3000-0ffc5000 rw-p 0ffc3000 00:00 0 0ffd5000-0ffdf000 r-xp 00000000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffdf000-0ffee000 ---p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffee000-0ffef000 r--p 00009000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffef000-0fff0000 rw-p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 10000000-10002000 r-xp 00000000 09:00 4492233 /usr/bin/octave-3.0.1 10012000-10013000 r--p 00002000 09:00 4492233 /usr/bin/octave-3.0.1 10013000-10014000 rw-p 00003000 09:00 4492233 /usr/bin/octave-3.0.1 10014000-123c7000 rwxp 10014000 00:00 0 [heap] 40000000-4001f000 r-xp 00000000 09:00 4490521 /lib/ld-2.9.so 4001f000-40023000 rw-p 4001f000 00:00 0 40027000-4002d000 rw-p 40027000 00:00 0 4002f000-40030000 r--p 0001f000 09:00 4490521 /lib/ld-2.9.so 40030000-40031000 rw-p 00020000 09:00 4490521 /lib/ld-2.9.so 40031000-401de000 rw-p 40031000 00:00 0 ffd49000-ffd5e000 rw-p ffd49000 00:00 0 [stack] panic: Aborted -- stopping myself... attempting to save variables to `octave-core'... save to `octave-core' complete Aborted OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/KNN_EuclidianDistance_1_3.m OK ../data/classifier/LDA_1_01.m OK ../data/classifier/LibLinear_0017_1_1en05_True.m OK ../data/classifier/LibLinear_023_1_1en05_True.m OK ../data/classifier/LibLinear_15_1_1en05_True.m OK ../data/classifier/LibLinear_30_16_1en05_True.m *** glibc detected *** octave: double free or corruption (fasttop): 0x11aef258 *** ======= Backtrace: ========= /lib/libc.so.6[0xd554228] /lib/libc.so.6(cfree+0xcc)[0xd55610c] /usr/lib/libstdc++.so.6(_ZdlPv+0x2c)[0xd779a6c] /usr/lib/libstdc++.so.6(_ZNSs4_Rep10_M_destroyERKSaIcE+0x24)[0xd745be4] /usr/lib/libstdc++.so.6(_ZNSsD1Ev+0x84)[0xd748154] /lib/libc.so.6(exit+0xfc)[0xd50dc9c] /usr/lib/octave-3.0.1/liboctinterp.so[0xf95fa2c] /usr/lib/octave-3.0.1/liboctinterp.so(octave_main+0xed0)[0xf8f7910] octave(main+0x14)[0x10001b84] /lib/libc.so.6[0xd4f1be4] /lib/libc.so.6[0xd4f1da0] ======= Memory map: ======== 00100000-00103000 r-xp 00100000 00:00 0 0bd56000-0be16000 r-xp 00000000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be16000-0be25000 ---p 000c0000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be25000-0be28000 r--p 000bf000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be28000-0be2c000 rw-p 000c2000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be2c000-0be2e000 rw-p 0be2c000 00:00 0 0be3e000-0bed6000 r-xp 00000000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bed6000-0bee5000 ---p 00098000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee5000-0bee8000 r--p 00097000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee8000-0beeb000 rw-p 0009a000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0beeb000-0beed000 rw-p 0beeb000 00:00 0 0befd000-0bf9a000 r-xp 00000000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bf9a000-0bfaa000 ---p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfaa000-0bfad000 r--p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfad000-0bfb1000 rw-p 000a0000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfb1000-0bfb4000 rw-p 0bfb1000 00:00 0 0bfc4000-0c201000 r-xp 00000000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c201000-0c210000 ---p 0023d000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c210000-0c216000 r--p 0023c000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c216000-0c223000 rw-p 00242000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c223000-0c225000 rw-p 0c223000 00:00 0 0c235000-0c457000 r-xp 00000000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c457000-0c466000 ---p 00222000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c466000-0c46e000 r--p 00221000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c46e000-0c47a000 rw-p 00229000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c47a000-0c486000 rw-p 0c47a000 00:00 0 0c496000-0c7a4000 r-xp 00000000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7a4000-0c7b3000 ---p 0030e000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7b3000-0c7bb000 r--p 0030d000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7bb000-0c7cb000 rw-p 00315000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7cb000-0c7cd000 rw-p 0c7cb000 00:00 0 0c7dd000-0c848000 r-xp 00000000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c848000-0c857000 ---p 0006b000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c857000-0c859000 r--p 0006a000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c859000-0c85b000 rw-p 0006c000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c85b000-0c85d000 rw-p 0c85b000 00:00 0 0c86d000-0c941000 r-xp 00000000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c941000-0c951000 ---p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c951000-0c954000 r--p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c954000-0c958000 rw-p 000d7000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c958000-0c95b000 rw-p 0c958000 00:00 0 0c96b000-0ca41000 r-xp 00000000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca41000-0ca51000 ---p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca51000-0ca54000 r--p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca54000-0ca5a000 rw-p 000d9000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca5a000-0ca5c000 rw-p 0ca5a000 00:00 0 0ca6c000-0cae8000 r-xp 00000000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cae8000-0caf8000 ---p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0caf8000-0cafa000 r--p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafa000-0cafd000 rw-p 0007e000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafd000-0caff000 rw-p 0cafd000 00:00 0 0cb0f000-0d0ac000 r-xp 00000000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0ac000-0d0bb000 ---p 0059d000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0bb000-0d0c1000 r--p 0059c000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0c1000-0d0c4000 rw-p 005a2000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0d4000-0d0f5000 r-xp 00000000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d0f5000-0d105000 ---p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d105000-0d106000 r--p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d106000-0d107000 rw-p 00022000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d117000-0d139000 r-xp 00000000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d139000-0d148000 ---p 00022000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d148000-0d14a000 r--p 00021000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d14a000-0d14b000 rw-p 00023000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d15b000-0d17d000 r-xp 00000000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d17d000-0d18d000 ---p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18d000-0d18e000 r--p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18e000-0d18f000 rw-p 00023000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d19f000-0d2dc000 r-xp 00000000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2dc000-0d2eb000 ---p 0013d000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2eb000-0d2f0000 r--p 0013c000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f0000-0d2f6000 rw-p 00141000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f6000-0d2f9000 rw-p 0d2f6000 00:00 0 0d309000-0d323000 r-xp 00000000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d323000-0d332000 ---p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d332000-0d333000 r--p 00019000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d333000-0d334000 rw-p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d344000-0d351000 r-xp 00000000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d351000-0d360000 ---p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d360000-0d361000 r--p 0000c000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d361000-0d362000 rw-p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d372000-0d387000 r-xp 00000000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d387000-0d396000 ---p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d396000-0d397000 r--p 00014000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d397000-0d398000 rw-p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d3a8000-0d3bb000 r-xp 00000000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3bb000-0d3cb000 ---p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cb000-0d3cc000 r--p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cc000-0d3cd000 rw-p 00014000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3dd000-0d3e9000 r-xp 00000000 09:00 4490531 /lib/libnss_files-2.9.so 0d3e9000-0d3f8000 ---p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f8000-0d3f9000 r--p 0000b000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f9000-0d3fa000 rw-p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d40a000-0d415000 r-xp 00000000 09:00 4490533 /lib/libnss_nis-2.9.so 0d415000-0d424000 ---p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d424000-0d425000 r--p 0000a000 09:00 4490533 /lib/libnss_nis-2.9.so 0d425000-0d426000 rw-p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d436000-0d44d000 r-xp 00000000 09:00 4490528 /lib/libnsl-2.9.so 0d44d000-0d45c000 ---p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45c000-0d45d000 r--p 00016000 09:00 4490528 /lib/libnsl-2.9.so 0d45d000-0d45e000 rw-p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45e000-0d460000 rw-p 0d45e000 00:00 0 0d470000-0d478000 r-xp 00000000 09:00 4490529 /lib/libnss_compat-2.9.so 0d478000-0d487000 ---p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d487000-0d488000 r--p 00007000 09:00 4490529 /lib/libnss_compat-2.9.so 0d488000-0d489000 rw-p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d499000-0d4b0000 r-xp 00000000 09:00 4490535 /lib/libpthread-2.9.so 0d4b0000-0d4bf000 ---p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4bf000-0d4c0000 r--p 00016000 09:00 4490535 /lib/libpthread-2.9.so 0d4c0000-0d4c1000 rw-p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4c1000-0d4c3000 rw-p 0d4c1000 00:00 0 0d4d3000-0d636000 r-xp 00000000 09:00 4490523 /lib/libc-2.9.so 0d636000-0d646000 ---p 00163000 09:00 4490523 /lib/libc-2.9.so 0d646000-0d64a000 r--p 00163000 09:00 4490523 /lib/libc-2.9.so 0d64a000-0d64b000 rw-p 00167000 09:00 4490523 /lib/libc-2.9.so 0d64b000-0d64e000 rw-p 0d64b000 00:00 0 0d65e000-0d674000 r-xp 00000000 09:00 4491671 /lib/libgcc_s.so.1 0d674000-0d683000 ---p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d683000-0d684000 r--p 00015000 09:00 4491671 /lib/libgcc_s.so.1 0d684000-0d685000 rw-p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d695000-0d7b1000 r-xp 00000000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7b1000-0d7c1000 ---p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c1000-0d7c5000 r--p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c5000-0d7c7000 rw-p 00120000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c7000-0d7cc000 rw-p 0d7c7000 00:00 0 0d7dc000-0d885000 r-xp 00000000 09:00 4490527 /lib/libm-2.9.so 0d885000-0d895000 ---p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d895000-0d898000 r--p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d898000-0d899000 rw-p 000ac000 09:00 4490527 /lib/libm-2.9.so 0d8a9000-0d965000 r-xp 00000000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d965000-0d974000 ---p 000bc000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d974000-0d976000 r--p 000bb000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d976000-0d977000 rw-p 000bd000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d987000-0d99c000 r-xp 00000000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d99c000-0d9ab000 ---p 00015000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9ab000-0d9ac000 rw-p 00014000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9bc000-0daf8000 r-xp 00000000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0daf8000-0db08000 ---p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db08000-0db0f000 rw-p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db1f000-0db22000 r-xp 00000000 09:00 4490526 /lib/libdl-2.9.so 0db22000-0db31000 ---p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db31000-0db32000 r--p 00002000 09:00 4490526 /lib/libdl-2.9.so 0db32000-0db33000 rw-p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db43000-0db7b000 r-xp 00000000 09:00 4490518 /lib/libncurses.so.5.7 0db7b000-0db8b000 ---p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8b000-0db8d000 r--p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8d000-0db8e000 rw-p 0003a000 09:00 4490518 /lib/libncurses.so.5.7 0db9e000-0dbd9000 r-xp 00000000 09:00 4491902 /lib/libreadline.so.5.2 0dbd9000-0dbe8000 ---p 0003b000 09:00 4491902 /lib/libreadline.so.5.2 0dbe8000-0dbed000 rw-p 0003a000 09:00 4491902 /lib/libreadline.so.5.2 0dbed000-0dbee000 rw-p 0dbed000 00:00 0 0dbfe000-0dc97000 r-xp 00000000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dc97000-0dca7000 ---p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dca7000-0dcac000 r--p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcac000-0dcad000 rw-p 0009e000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcbd000-0e295000 r-xp 00000000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e295000-0e2a4000 ---p 005d8000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2a4000-0e2ab000 r--p 005d7000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2ab000-0e2ae000 rw-p 005de000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2be000-0e86a000 r-xp 00000000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e86a000-0e879000 ---p 005ac000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e879000-0e881000 r--p 005ab000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e881000-0e884000 rw-p 005b3000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e884000-0e991000 rw-p 0e884000 00:00 0 0e9a1000-0e9d7000 r-xp 00000000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9d7000-0e9e6000 ---p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e6000-0e9e7000 r--p 00035000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e7000-0e9e8000 rw-p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9f8000-0ea05000 r-xp 00000000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea05000-0ea14000 ---p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea14000-0ea15000 r--p 0000c000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea15000-0ea16000 rw-p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea26000-0eaf7000 r-xp 00000000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eaf7000-0eb07000 ---p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb07000-0eb09000 r--p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb09000-0eb0a000 rw-p 000d3000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb1a000-0eb22000 r-xp 00000000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb22000-0eb31000 ---p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb31000-0eb32000 r--p 00007000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb32000-0eb33000 rw-p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb43000-0eb4e000 r-xp 00000000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb4e000-0eb5d000 ---p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5d000-0eb5e000 r--p 0000a000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5e000-0eb5f000 rw-p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb6f000-0eb79000 r-xp 00000000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb79000-0eb88000 ---p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb88000-0eb89000 r--p 00009000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb89000-0eb8a000 rw-p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb9a000-0ec54000 r-xp 00000000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec54000-0ec64000 ---p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec64000-0ec67000 r--p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec67000-0ec68000 rw-p 000bd000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec78000-0ecce000 r-xp 00000000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecce000-0ecdd000 ---p 00056000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdd000-0ecdf000 r--p 00055000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdf000-0ece0000 rw-p 00057000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ece0000-0ece2000 rw-p 0ece0000 00:00 0 0ecf2000-0f584000 r-xp 00000000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f584000-0f594000 ---p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f594000-0f59f000 r--p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f59f000-0f5a3000 rw-p 0089d000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f5a3000-0f5a7000 rw-p 0f5a3000 00:00 0 0f5b7000-0ff89000 r-xp 00000000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff89000-0ff98000 ---p 009d2000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff98000-0ffbc000 r--p 009d1000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffbc000-0ffc3000 rw-p 009f5000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffc3000-0ffc5000 rw-p 0ffc3000 00:00 0 0ffd5000-0ffdf000 r-xp 00000000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffdf000-0ffee000 ---p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffee000-0ffef000 r--p 00009000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffef000-0fff0000 rw-p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 10000000-10002000 r-xp 00000000 09:00 4492233 /usr/bin/octave-3.0.1 10012000-10013000 r--p 00002000 09:00 4492233 /usr/bin/octave-3.0.1 10013000-10014000 rw-p 00003000 09:00 4492233 /usr/bin/octave-3.0.1 10014000-12222000 rwxp 10014000 00:00 0 [heap] 40000000-4001f000 r-xp 00000000 09:00 4490521 /lib/ld-2.9.so 4001f000-40023000 rw-p 4001f000 00:00 0 40027000-4002d000 rw-p 40027000 00:00 0 4002f000-40030000 r--p 0001f000 09:00 4490521 /lib/ld-2.9.so 40030000-40031000 rw-p 00020000 09:00 4490521 /lib/ld-2.9.so 40031000-401de000 rw-p 40031000 00:00 0 ff960000-ff975000 rw-p ff960000 00:00 0 [stack] panic: Aborted -- stopping myself... attempting to save variables to `octave-core'... save to `octave-core' complete Aborted OK ../data/classifier/LibLinear_30_1_1en05_True.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_30_1.m *** glibc detected *** octave: double free or corruption (fasttop): 0x11af02d0 *** ======= Backtrace: ========= /lib/libc.so.6[0xd554228] /lib/libc.so.6(cfree+0xcc)[0xd55610c] /usr/lib/libstdc++.so.6(_ZdlPv+0x2c)[0xd779a6c] /usr/lib/libstdc++.so.6(_ZNSs4_Rep10_M_destroyERKSaIcE+0x24)[0xd745be4] /usr/lib/libstdc++.so.6(_ZNSsD1Ev+0x84)[0xd748154] /lib/libc.so.6(exit+0xfc)[0xd50dc9c] /usr/lib/octave-3.0.1/liboctinterp.so[0xf95fa2c] /usr/lib/octave-3.0.1/liboctinterp.so(octave_main+0xed0)[0xf8f7910] octave(main+0x14)[0x10001b84] /lib/libc.so.6[0xd4f1be4] /lib/libc.so.6[0xd4f1da0] ======= Memory map: ======== 00100000-00103000 r-xp 00100000 00:00 0 0bd56000-0be16000 r-xp 00000000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be16000-0be25000 ---p 000c0000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be25000-0be28000 r--p 000bf000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be28000-0be2c000 rw-p 000c2000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be2c000-0be2e000 rw-p 0be2c000 00:00 0 0be3e000-0bed6000 r-xp 00000000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bed6000-0bee5000 ---p 00098000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee5000-0bee8000 r--p 00097000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee8000-0beeb000 rw-p 0009a000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0beeb000-0beed000 rw-p 0beeb000 00:00 0 0befd000-0bf9a000 r-xp 00000000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bf9a000-0bfaa000 ---p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfaa000-0bfad000 r--p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfad000-0bfb1000 rw-p 000a0000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfb1000-0bfb4000 rw-p 0bfb1000 00:00 0 0bfc4000-0c201000 r-xp 00000000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c201000-0c210000 ---p 0023d000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c210000-0c216000 r--p 0023c000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c216000-0c223000 rw-p 00242000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c223000-0c225000 rw-p 0c223000 00:00 0 0c235000-0c457000 r-xp 00000000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c457000-0c466000 ---p 00222000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c466000-0c46e000 r--p 00221000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c46e000-0c47a000 rw-p 00229000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c47a000-0c486000 rw-p 0c47a000 00:00 0 0c496000-0c7a4000 r-xp 00000000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7a4000-0c7b3000 ---p 0030e000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7b3000-0c7bb000 r--p 0030d000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7bb000-0c7cb000 rw-p 00315000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7cb000-0c7cd000 rw-p 0c7cb000 00:00 0 0c7dd000-0c848000 r-xp 00000000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c848000-0c857000 ---p 0006b000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c857000-0c859000 r--p 0006a000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c859000-0c85b000 rw-p 0006c000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c85b000-0c85d000 rw-p 0c85b000 00:00 0 0c86d000-0c941000 r-xp 00000000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c941000-0c951000 ---p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c951000-0c954000 r--p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c954000-0c958000 rw-p 000d7000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c958000-0c95b000 rw-p 0c958000 00:00 0 0c96b000-0ca41000 r-xp 00000000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca41000-0ca51000 ---p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca51000-0ca54000 r--p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca54000-0ca5a000 rw-p 000d9000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca5a000-0ca5c000 rw-p 0ca5a000 00:00 0 0ca6c000-0cae8000 r-xp 00000000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cae8000-0caf8000 ---p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0caf8000-0cafa000 r--p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafa000-0cafd000 rw-p 0007e000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafd000-0caff000 rw-p 0cafd000 00:00 0 0cb0f000-0d0ac000 r-xp 00000000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0ac000-0d0bb000 ---p 0059d000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0bb000-0d0c1000 r--p 0059c000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0c1000-0d0c4000 rw-p 005a2000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0d4000-0d0f5000 r-xp 00000000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d0f5000-0d105000 ---p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d105000-0d106000 r--p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d106000-0d107000 rw-p 00022000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d117000-0d139000 r-xp 00000000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d139000-0d148000 ---p 00022000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d148000-0d14a000 r--p 00021000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d14a000-0d14b000 rw-p 00023000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d15b000-0d17d000 r-xp 00000000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d17d000-0d18d000 ---p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18d000-0d18e000 r--p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18e000-0d18f000 rw-p 00023000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d19f000-0d2dc000 r-xp 00000000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2dc000-0d2eb000 ---p 0013d000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2eb000-0d2f0000 r--p 0013c000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f0000-0d2f6000 rw-p 00141000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f6000-0d2f9000 rw-p 0d2f6000 00:00 0 0d309000-0d323000 r-xp 00000000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d323000-0d332000 ---p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d332000-0d333000 r--p 00019000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d333000-0d334000 rw-p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d344000-0d351000 r-xp 00000000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d351000-0d360000 ---p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d360000-0d361000 r--p 0000c000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d361000-0d362000 rw-p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d372000-0d387000 r-xp 00000000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d387000-0d396000 ---p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d396000-0d397000 r--p 00014000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d397000-0d398000 rw-p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d3a8000-0d3bb000 r-xp 00000000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3bb000-0d3cb000 ---p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cb000-0d3cc000 r--p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cc000-0d3cd000 rw-p 00014000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3dd000-0d3e9000 r-xp 00000000 09:00 4490531 /lib/libnss_files-2.9.so 0d3e9000-0d3f8000 ---p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f8000-0d3f9000 r--p 0000b000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f9000-0d3fa000 rw-p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d40a000-0d415000 r-xp 00000000 09:00 4490533 /lib/libnss_nis-2.9.so 0d415000-0d424000 ---p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d424000-0d425000 r--p 0000a000 09:00 4490533 /lib/libnss_nis-2.9.so 0d425000-0d426000 rw-p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d436000-0d44d000 r-xp 00000000 09:00 4490528 /lib/libnsl-2.9.so 0d44d000-0d45c000 ---p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45c000-0d45d000 r--p 00016000 09:00 4490528 /lib/libnsl-2.9.so 0d45d000-0d45e000 rw-p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45e000-0d460000 rw-p 0d45e000 00:00 0 0d470000-0d478000 r-xp 00000000 09:00 4490529 /lib/libnss_compat-2.9.so 0d478000-0d487000 ---p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d487000-0d488000 r--p 00007000 09:00 4490529 /lib/libnss_compat-2.9.so 0d488000-0d489000 rw-p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d499000-0d4b0000 r-xp 00000000 09:00 4490535 /lib/libpthread-2.9.so 0d4b0000-0d4bf000 ---p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4bf000-0d4c0000 r--p 00016000 09:00 4490535 /lib/libpthread-2.9.so 0d4c0000-0d4c1000 rw-p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4c1000-0d4c3000 rw-p 0d4c1000 00:00 0 0d4d3000-0d636000 r-xp 00000000 09:00 4490523 /lib/libc-2.9.so 0d636000-0d646000 ---p 00163000 09:00 4490523 /lib/libc-2.9.so 0d646000-0d64a000 r--p 00163000 09:00 4490523 /lib/libc-2.9.so 0d64a000-0d64b000 rw-p 00167000 09:00 4490523 /lib/libc-2.9.so 0d64b000-0d64e000 rw-p 0d64b000 00:00 0 0d65e000-0d674000 r-xp 00000000 09:00 4491671 /lib/libgcc_s.so.1 0d674000-0d683000 ---p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d683000-0d684000 r--p 00015000 09:00 4491671 /lib/libgcc_s.so.1 0d684000-0d685000 rw-p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d695000-0d7b1000 r-xp 00000000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7b1000-0d7c1000 ---p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c1000-0d7c5000 r--p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c5000-0d7c7000 rw-p 00120000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c7000-0d7cc000 rw-p 0d7c7000 00:00 0 0d7dc000-0d885000 r-xp 00000000 09:00 4490527 /lib/libm-2.9.so 0d885000-0d895000 ---p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d895000-0d898000 r--p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d898000-0d899000 rw-p 000ac000 09:00 4490527 /lib/libm-2.9.so 0d8a9000-0d965000 r-xp 00000000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d965000-0d974000 ---p 000bc000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d974000-0d976000 r--p 000bb000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d976000-0d977000 rw-p 000bd000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d987000-0d99c000 r-xp 00000000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d99c000-0d9ab000 ---p 00015000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9ab000-0d9ac000 rw-p 00014000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9bc000-0daf8000 r-xp 00000000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0daf8000-0db08000 ---p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db08000-0db0f000 rw-p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db1f000-0db22000 r-xp 00000000 09:00 4490526 /lib/libdl-2.9.so 0db22000-0db31000 ---p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db31000-0db32000 r--p 00002000 09:00 4490526 /lib/libdl-2.9.so 0db32000-0db33000 rw-p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db43000-0db7b000 r-xp 00000000 09:00 4490518 /lib/libncurses.so.5.7 0db7b000-0db8b000 ---p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8b000-0db8d000 r--p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8d000-0db8e000 rw-p 0003a000 09:00 4490518 /lib/libncurses.so.5.7 0db9e000-0dbd9000 r-xp 00000000 09:00 4491902 /lib/libreadline.so.5.2 0dbd9000-0dbe8000 ---p 0003b000 09:00 4491902 /lib/libreadline.so.5.2 0dbe8000-0dbed000 rw-p 0003a000 09:00 4491902 /lib/libreadline.so.5.2 0dbed000-0dbee000 rw-p 0dbed000 00:00 0 0dbfe000-0dc97000 r-xp 00000000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dc97000-0dca7000 ---p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dca7000-0dcac000 r--p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcac000-0dcad000 rw-p 0009e000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcbd000-0e295000 r-xp 00000000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e295000-0e2a4000 ---p 005d8000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2a4000-0e2ab000 r--p 005d7000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2ab000-0e2ae000 rw-p 005de000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2be000-0e86a000 r-xp 00000000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e86a000-0e879000 ---p 005ac000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e879000-0e881000 r--p 005ab000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e881000-0e884000 rw-p 005b3000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e884000-0e991000 rw-p 0e884000 00:00 0 0e9a1000-0e9d7000 r-xp 00000000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9d7000-0e9e6000 ---p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e6000-0e9e7000 r--p 00035000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e7000-0e9e8000 rw-p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9f8000-0ea05000 r-xp 00000000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea05000-0ea14000 ---p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea14000-0ea15000 r--p 0000c000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea15000-0ea16000 rw-p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea26000-0eaf7000 r-xp 00000000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eaf7000-0eb07000 ---p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb07000-0eb09000 r--p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb09000-0eb0a000 rw-p 000d3000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb1a000-0eb22000 r-xp 00000000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb22000-0eb31000 ---p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb31000-0eb32000 r--p 00007000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb32000-0eb33000 rw-p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb43000-0eb4e000 r-xp 00000000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb4e000-0eb5d000 ---p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5d000-0eb5e000 r--p 0000a000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5e000-0eb5f000 rw-p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb6f000-0eb79000 r-xp 00000000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb79000-0eb88000 ---p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb88000-0eb89000 r--p 00009000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb89000-0eb8a000 rw-p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb9a000-0ec54000 r-xp 00000000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec54000-0ec64000 ---p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec64000-0ec67000 r--p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec67000-0ec68000 rw-p 000bd000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec78000-0ecce000 r-xp 00000000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecce000-0ecdd000 ---p 00056000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdd000-0ecdf000 r--p 00055000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdf000-0ece0000 rw-p 00057000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ece0000-0ece2000 rw-p 0ece0000 00:00 0 0ecf2000-0f584000 r-xp 00000000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f584000-0f594000 ---p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f594000-0f59f000 r--p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f59f000-0f5a3000 rw-p 0089d000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f5a3000-0f5a7000 rw-p 0f5a3000 00:00 0 0f5b7000-0ff89000 r-xp 00000000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff89000-0ff98000 ---p 009d2000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff98000-0ffbc000 r--p 009d1000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffbc000-0ffc3000 rw-p 009f5000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffc3000-0ffc5000 rw-p 0ffc3000 00:00 0 0ffd5000-0ffdf000 r-xp 00000000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffdf000-0ffee000 ---p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffee000-0ffef000 r--p 00009000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffef000-0fff0000 rw-p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 10000000-10002000 r-xp 00000000 09:00 4492233 /usr/bin/octave-3.0.1 10012000-10013000 r--p 00002000 09:00 4492233 /usr/bin/octave-3.0.1 10013000-10014000 rw-p 00003000 09:00 4492233 /usr/bin/octave-3.0.1 10014000-12282000 rwxp 10014000 00:00 0 [heap] 40000000-4001f000 r-xp 00000000 09:00 4490521 /lib/ld-2.9.so 4001f000-40023000 rw-p 4001f000 00:00 0 40027000-4002d000 rw-p 40027000 00:00 0 4002f000-40030000 r--p 0001f000 09:00 4490521 /lib/ld-2.9.so 40030000-40031000 rw-p 00020000 09:00 4490521 /lib/ld-2.9.so 40031000-401de000 rw-p 40031000 00:00 0 ff836000-ff84b000 rw-p ff836000 00:00 0 [stack] panic: Aborted -- stopping myself... attempting to save variables to `octave-core'... save to `octave-core' complete Aborted OK ../data/classifier/Perceptron_01_1_1000.m warning: Perceptron algorithm did not converge after 1000 iterations. OK ../data/classifier/SVMLin_0017_1_1en05_True.m OK ../data/classifier/SVMLin_023_1_1en05_True.m OK ../data/classifier/SVMLin_15_1_1en05_True.m OK ../data/classifier/SVMLin_30_16_1en05_True.m OK ../data/classifier/SVMLin_30_1_1en05_True.m OK ../data/classifier/SVMOcas_0017_1_1en05_False.m OK ../data/classifier/SVMOcas_023_1_1en05_False.m OK ../data/classifier/SVMOcas_15_1_1en05_False.m OK ../data/classifier/SVMOcas_30_16_1en05_False.m ERROR ../data/classifier/SVMOcas_30_1_1en05_False.m ERROR ../data/classifier/SVMSGD_0017_1_1en05_True.m OK ../data/classifier/SVMSGD_023_1_1en05_True.m OK ../data/classifier/SVMSGD_15_1_1en05_True.m OK ../data/classifier/SVMSGD_30_16_1en05_True.m OK ../data/classifier/SVMSGD_30_1_1en05_True.m OK ../data/classifier/SubGradientSVM_05_0017_1_1en05_False.m ERROR ../data/classifier/SubGradientSVM_05_023_1_1en05_False.m ERROR ../data/classifier/SubGradientSVM_05_15_1_1en05_False.m ERROR ../data/classifier/SubGradientSVM_05_30_16_1en05_False.m ERROR ../data/classifier/SubGradientSVM_05_30_1_1en05_False.m ERROR *** Testing in ../data/clustering/*.m ../data/clustering/Hierarchical_EuclidianDistance_3.m OK ../data/clustering/KMeans_EuclidianDistance_3.m OK *** Testing in ../data/distance/*.m ../data/distance/BrayCurtisDistance_fnord.m OK ../data/distance/CanberraMetric_fnord.m OK ../data/distance/CanberraWordDistance_60_0_False_DNA_3.m OK ../data/distance/ChebyshewMetric_fnord.m OK ../data/distance/ChiSquareDistance_fnord.m OK ../data/distance/CosineDistance_fnord.m OK ../data/distance/EuclidianDistance_fnord.m OK ../data/distance/GeodesicMetric_fnord.m OK ../data/distance/HammingWordDistance_60_0_False_False_DNA_3.m OK ../data/distance/HammingWordDistance_60_0_False_True_DNA_3.m OK ../data/distance/JensenMetric_fnord.m OK ../data/distance/ManhattanMetric_fnord.m OK ../data/distance/ManhattanWordDistance_60_0_False_DNA_3.m OK ../data/distance/MinkowskiMetric_13.m OK ../data/distance/SparseEuclidianDistance_fnord.m OK ../data/distance/TanimotoDistance_fnord.m OK *** Testing in ../data/distribution/*.m ../data/distribution/HMM_4_60_6_3_0_1en10_False_CUBE_1.m ERROR ../data/distribution/Histogram_False_60_0_DNA_3.m OK ../data/distribution/LinearHMM_False_60_0_DNA_3.m OK *** Testing in ../data/kernel/*.m ../data/kernel/AUC_15_Gaussian_10.m OK ../data/kernel/Chi2_10_12.m OK ../data/kernel/Combined_3_10_60_LocalAlignmentString_FixedDegreeString_10_True_3_DNA_DNA_60_PolyMatchString_60_10_DNA.m OK ../data/kernel/CommUlongString_60_0_False_False_DNA_3.m OK ../data/kernel/CommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/Const_230.m OK ../data/kernel/Custom_7.m OK ../data/kernel/Diag_230.m OK ../data/kernel/Distance_CanberraMetric_17.m OK ../data/kernel/FixedDegreeString_60_3_DNA.m OK ../data/kernel/GaussianShift_1_2_13.m OK ../data/kernel/Gaussian_13.m OK ../data/kernel/HistogramWordString_60_0_DNA_3_False.m OK ../data/kernel/LinearByte_60_RAWBYTE.m OK ../data/kernel/LinearString_60_DNA.m OK ../data/kernel/LinearWord_fnord.m OK ../data/kernel/Linear_fnord.m OK ../data/kernel/LocalAlignmentString_60_DNA.m OK ../data/kernel/MatchWordString_60_0_False_3_DNA_3.m OK ../data/kernel/PolyMatchString_60_3_False_DNA.m OK ../data/kernel/PolyMatchString_60_3_True_DNA.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_False.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_True.m OK ../data/kernel/Poly_4_6_0_8_3_FK_False_True_01_1_CUBE_1_False.m ERROR ../data/kernel/Poly_4_6_0_8_3_TOP_False_True_01_1_CUBE_1_False.m ERROR ../data/kernel/Poly_False_3_False.m OK ../data/kernel/Poly_False_3_True.m OK ../data/kernel/Poly_True_3_False.m OK ../data/kernel/Poly_True_3_True.m OK ../data/kernel/SalzbergWordString_60_0_DNA_3_False.m OK ../data/kernel/Sigmoid_07_10_05.m OK ../data/kernel/Sigmoid_13_10_11.m OK ../data/kernel/SimpleLocalityImprovedString_5_60_7_DNA_5.m OK ../data/kernel/SparseGaussian_13.m OK ../data/kernel/SparseLinear_fnord.m OK ../data/kernel/SparsePoly_3_10_False.m OK ../data/kernel/SparsePoly_3_10_True.m OK ../data/kernel/WeightedCommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/WeightedDegreePositionString_60_1_DNA.m OK ../data/kernel/WeightedDegreePositionString_60_20_DNA.m OK ../data/kernel/WeightedDegreeString_60_1_DNA.m OK ../data/kernel/WeightedDegreeString_60_20_DNA.m OK *** Testing in ../data/preproc/*.m ../data/preproc/LogPlusOne_Gaussian_12.m OK ../data/preproc/NormOne_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_False_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_True_Gaussian_12.m OK ../data/preproc/SortUlongString_60_0_False_DNA_CommUlongString_3_False.m OK ../data/preproc/SortWordString_60_0_False_DNA_CommWordString_3_False.m OK *** Testing in ../data/regression/*.m ../data/regression/KRR_Gaussian_16_1en05_15.m *** glibc detected *** octave: double free or corruption (fasttop): 0x11d32210 *** ======= Backtrace: ========= /lib/libc.so.6[0xd554228] /lib/libc.so.6(cfree+0xcc)[0xd55610c] /usr/lib/libstdc++.so.6(_ZdlPv+0x2c)[0xd779a6c] /usr/lib/libstdc++.so.6(_ZNSs4_Rep10_M_destroyERKSaIcE+0x24)[0xd745be4] /usr/lib/libstdc++.so.6(_ZNSsD1Ev+0x84)[0xd748154] /lib/libc.so.6(exit+0xfc)[0xd50dc9c] /usr/lib/octave-3.0.1/liboctinterp.so[0xf95fa2c] /usr/lib/octave-3.0.1/liboctinterp.so(octave_main+0xed0)[0xf8f7910] octave(main+0x14)[0x10001b84] /lib/libc.so.6[0xd4f1be4] /lib/libc.so.6[0xd4f1da0] ======= Memory map: ======== 00100000-00103000 r-xp 00100000 00:00 0 0bd56000-0be16000 r-xp 00000000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be16000-0be25000 ---p 000c0000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be25000-0be28000 r--p 000bf000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be28000-0be2c000 rw-p 000c2000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be2c000-0be2e000 rw-p 0be2c000 00:00 0 0be3e000-0bed6000 r-xp 00000000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bed6000-0bee5000 ---p 00098000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee5000-0bee8000 r--p 00097000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee8000-0beeb000 rw-p 0009a000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0beeb000-0beed000 rw-p 0beeb000 00:00 0 0befd000-0bf9a000 r-xp 00000000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bf9a000-0bfaa000 ---p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfaa000-0bfad000 r--p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfad000-0bfb1000 rw-p 000a0000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfb1000-0bfb4000 rw-p 0bfb1000 00:00 0 0bfc4000-0c201000 r-xp 00000000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c201000-0c210000 ---p 0023d000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c210000-0c216000 r--p 0023c000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c216000-0c223000 rw-p 00242000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c223000-0c225000 rw-p 0c223000 00:00 0 0c235000-0c457000 r-xp 00000000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c457000-0c466000 ---p 00222000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c466000-0c46e000 r--p 00221000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c46e000-0c47a000 rw-p 00229000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c47a000-0c486000 rw-p 0c47a000 00:00 0 0c496000-0c7a4000 r-xp 00000000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7a4000-0c7b3000 ---p 0030e000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7b3000-0c7bb000 r--p 0030d000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7bb000-0c7cb000 rw-p 00315000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7cb000-0c7cd000 rw-p 0c7cb000 00:00 0 0c7dd000-0c848000 r-xp 00000000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c848000-0c857000 ---p 0006b000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c857000-0c859000 r--p 0006a000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c859000-0c85b000 rw-p 0006c000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c85b000-0c85d000 rw-p 0c85b000 00:00 0 0c86d000-0c941000 r-xp 00000000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c941000-0c951000 ---p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c951000-0c954000 r--p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c954000-0c958000 rw-p 000d7000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c958000-0c95b000 rw-p 0c958000 00:00 0 0c96b000-0ca41000 r-xp 00000000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca41000-0ca51000 ---p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca51000-0ca54000 r--p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca54000-0ca5a000 rw-p 000d9000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca5a000-0ca5c000 rw-p 0ca5a000 00:00 0 0ca6c000-0cae8000 r-xp 00000000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cae8000-0caf8000 ---p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0caf8000-0cafa000 r--p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafa000-0cafd000 rw-p 0007e000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafd000-0caff000 rw-p 0cafd000 00:00 0 0cb0f000-0d0ac000 r-xp 00000000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0ac000-0d0bb000 ---p 0059d000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0bb000-0d0c1000 r--p 0059c000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0c1000-0d0c4000 rw-p 005a2000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0d4000-0d0f5000 r-xp 00000000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d0f5000-0d105000 ---p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d105000-0d106000 r--p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d106000-0d107000 rw-p 00022000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d117000-0d139000 r-xp 00000000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d139000-0d148000 ---p 00022000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d148000-0d14a000 r--p 00021000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d14a000-0d14b000 rw-p 00023000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d15b000-0d17d000 r-xp 00000000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d17d000-0d18d000 ---p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18d000-0d18e000 r--p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18e000-0d18f000 rw-p 00023000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d19f000-0d2dc000 r-xp 00000000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2dc000-0d2eb000 ---p 0013d000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2eb000-0d2f0000 r--p 0013c000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f0000-0d2f6000 rw-p 00141000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f6000-0d2f9000 rw-p 0d2f6000 00:00 0 0d309000-0d323000 r-xp 00000000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d323000-0d332000 ---p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d332000-0d333000 r--p 00019000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d333000-0d334000 rw-p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d344000-0d351000 r-xp 00000000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d351000-0d360000 ---p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d360000-0d361000 r--p 0000c000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d361000-0d362000 rw-p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d372000-0d387000 r-xp 00000000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d387000-0d396000 ---p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d396000-0d397000 r--p 00014000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d397000-0d398000 rw-p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d3a8000-0d3bb000 r-xp 00000000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3bb000-0d3cb000 ---p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cb000-0d3cc000 r--p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cc000-0d3cd000 rw-p 00014000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3dd000-0d3e9000 r-xp 00000000 09:00 4490531 /lib/libnss_files-2.9.so 0d3e9000-0d3f8000 ---p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f8000-0d3f9000 r--p 0000b000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f9000-0d3fa000 rw-p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d40a000-0d415000 r-xp 00000000 09:00 4490533 /lib/libnss_nis-2.9.so 0d415000-0d424000 ---p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d424000-0d425000 r--p 0000a000 09:00 4490533 /lib/libnss_nis-2.9.so 0d425000-0d426000 rw-p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d436000-0d44d000 r-xp 00000000 09:00 4490528 /lib/libnsl-2.9.so 0d44d000-0d45c000 ---p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45c000-0d45d000 r--p 00016000 09:00 4490528 /lib/libnsl-2.9.so 0d45d000-0d45e000 rw-p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45e000-0d460000 rw-p 0d45e000 00:00 0 0d470000-0d478000 r-xp 00000000 09:00 4490529 /lib/libnss_compat-2.9.so 0d478000-0d487000 ---p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d487000-0d488000 r--p 00007000 09:00 4490529 /lib/libnss_compat-2.9.so 0d488000-0d489000 rw-p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d499000-0d4b0000 r-xp 00000000 09:00 4490535 /lib/libpthread-2.9.so 0d4b0000-0d4bf000 ---p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4bf000-0d4c0000 r--p 00016000 09:00 4490535 /lib/libpthread-2.9.so 0d4c0000-0d4c1000 rw-p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4c1000-0d4c3000 rw-p 0d4c1000 00:00 0 0d4d3000-0d636000 r-xp 00000000 09:00 4490523 /lib/libc-2.9.so 0d636000-0d646000 ---p 00163000 09:00 4490523 /lib/libc-2.9.so 0d646000-0d64a000 r--p 00163000 09:00 4490523 /lib/libc-2.9.so 0d64a000-0d64b000 rw-p 00167000 09:00 4490523 /lib/libc-2.9.so 0d64b000-0d64e000 rw-p 0d64b000 00:00 0 0d65e000-0d674000 r-xp 00000000 09:00 4491671 /lib/libgcc_s.so.1 0d674000-0d683000 ---p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d683000-0d684000 r--p 00015000 09:00 4491671 /lib/libgcc_s.so.1 0d684000-0d685000 rw-p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d695000-0d7b1000 r-xp 00000000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7b1000-0d7c1000 ---p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c1000-0d7c5000 r--p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c5000-0d7c7000 rw-p 00120000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c7000-0d7cc000 rw-p 0d7c7000 00:00 0 0d7dc000-0d885000 r-xp 00000000 09:00 4490527 /lib/libm-2.9.so 0d885000-0d895000 ---p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d895000-0d898000 r--p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d898000-0d899000 rw-p 000ac000 09:00 4490527 /lib/libm-2.9.so 0d8a9000-0d965000 r-xp 00000000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d965000-0d974000 ---p 000bc000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d974000-0d976000 r--p 000bb000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d976000-0d977000 rw-p 000bd000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d987000-0d99c000 r-xp 00000000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d99c000-0d9ab000 ---p 00015000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9ab000-0d9ac000 rw-p 00014000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9bc000-0daf8000 r-xp 00000000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0daf8000-0db08000 ---p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db08000-0db0f000 rw-p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db1f000-0db22000 r-xp 00000000 09:00 4490526 /lib/libdl-2.9.so 0db22000-0db31000 ---p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db31000-0db32000 r--p 00002000 09:00 4490526 /lib/libdl-2.9.so 0db32000-0db33000 rw-p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db43000-0db7b000 r-xp 00000000 09:00 4490518 /lib/libncurses.so.5.7 0db7b000-0db8b000 ---p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8b000-0db8d000 r--p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8d000-0db8e000 rw-p 0003a000 09:00 4490518 /lib/libncurses.so.5.7 0db9e000-0dbd9000 r-xp 00000000 09:00 4491902 /lib/libreadline.so.5.2 0dbd9000-0dbe8000 ---p 0003b000 09:00 4491902 /lib/libreadline.so.5.2 0dbe8000-0dbed000 rw-p 0003a000 09:00 4491902 /lib/libreadline.so.5.2 0dbed000-0dbee000 rw-p 0dbed000 00:00 0 0dbfe000-0dc97000 r-xp 00000000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dc97000-0dca7000 ---p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dca7000-0dcac000 r--p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcac000-0dcad000 rw-p 0009e000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcbd000-0e295000 r-xp 00000000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e295000-0e2a4000 ---p 005d8000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2a4000-0e2ab000 r--p 005d7000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2ab000-0e2ae000 rw-p 005de000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2be000-0e86a000 r-xp 00000000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e86a000-0e879000 ---p 005ac000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e879000-0e881000 r--p 005ab000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e881000-0e884000 rw-p 005b3000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e884000-0e991000 rw-p 0e884000 00:00 0 0e9a1000-0e9d7000 r-xp 00000000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9d7000-0e9e6000 ---p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e6000-0e9e7000 r--p 00035000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e7000-0e9e8000 rw-p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9f8000-0ea05000 r-xp 00000000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea05000-0ea14000 ---p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea14000-0ea15000 r--p 0000c000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea15000-0ea16000 rw-p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea26000-0eaf7000 r-xp 00000000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eaf7000-0eb07000 ---p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb07000-0eb09000 r--p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb09000-0eb0a000 rw-p 000d3000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb1a000-0eb22000 r-xp 00000000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb22000-0eb31000 ---p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb31000-0eb32000 r--p 00007000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb32000-0eb33000 rw-p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb43000-0eb4e000 r-xp 00000000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb4e000-0eb5d000 ---p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5d000-0eb5e000 r--p 0000a000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5e000-0eb5f000 rw-p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb6f000-0eb79000 r-xp 00000000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb79000-0eb88000 ---p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb88000-0eb89000 r--p 00009000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb89000-0eb8a000 rw-p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb9a000-0ec54000 r-xp 00000000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec54000-0ec64000 ---p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec64000-0ec67000 r--p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec67000-0ec68000 rw-p 000bd000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec78000-0ecce000 r-xp 00000000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecce000-0ecdd000 ---p 00056000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdd000-0ecdf000 r--p 00055000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdf000-0ece0000 rw-p 00057000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ece0000-0ece2000 rw-p 0ece0000 00:00 0 0ecf2000-0f584000 r-xp 00000000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f584000-0f594000 ---p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f594000-0f59f000 r--p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f59f000-0f5a3000 rw-p 0089d000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f5a3000-0f5a7000 rw-p 0f5a3000 00:00 0 0f5b7000-0ff89000 r-xp 00000000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff89000-0ff98000 ---p 009d2000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff98000-0ffbc000 r--p 009d1000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffbc000-0ffc3000 rw-p 009f5000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffc3000-0ffc5000 rw-p 0ffc3000 00:00 0 0ffd5000-0ffdf000 r-xp 00000000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffdf000-0ffee000 ---p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffee000-0ffef000 r--p 00009000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffef000-0fff0000 rw-p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 10000000-10002000 r-xp 00000000 09:00 4492233 /usr/bin/octave-3.0.1 10012000-10013000 r--p 00002000 09:00 4492233 /usr/bin/octave-3.0.1 10013000-10014000 rw-p 00003000 09:00 4492233 /usr/bin/octave-3.0.1 10014000-12261000 rwxp 10014000 00:00 0 [heap] 40000000-4001f000 r-xp 00000000 09:00 4490521 /lib/ld-2.9.so 4001f000-40023000 rw-p 4001f000 00:00 0 40027000-4002d000 rw-p 40027000 00:00 0 4002f000-40030000 r--p 0001f000 09:00 4490521 /lib/ld-2.9.so 40030000-40031000 rw-p 00020000 09:00 4490521 /lib/ld-2.9.so 40031000-401de000 rw-p 40031000 00:00 0 ffc83000-ffc98000 rw-p ffc83000 00:00 0 [stack] panic: Aborted -- stopping myself... attempting to save variables to `octave-core'... save to `octave-core' complete Aborted OK ../data/regression/KRR_Gaussian_1_1en05_15.m *** glibc detected *** octave: double free or corruption (fasttop): 0x11d32230 *** ======= Backtrace: ========= /lib/libc.so.6[0xd554228] /lib/libc.so.6(cfree+0xcc)[0xd55610c] /usr/lib/libstdc++.so.6(_ZdlPv+0x2c)[0xd779a6c] /usr/lib/libstdc++.so.6(_ZNSs4_Rep10_M_destroyERKSaIcE+0x24)[0xd745be4] /usr/lib/libstdc++.so.6(_ZNSsD1Ev+0x84)[0xd748154] /lib/libc.so.6(exit+0xfc)[0xd50dc9c] /usr/lib/octave-3.0.1/liboctinterp.so[0xf95fa2c] /usr/lib/octave-3.0.1/liboctinterp.so(octave_main+0xed0)[0xf8f7910] octave(main+0x14)[0x10001b84] /lib/libc.so.6[0xd4f1be4] /lib/libc.so.6[0xd4f1da0] ======= Memory map: ======== 00100000-00103000 r-xp 00100000 00:00 0 0bd56000-0be16000 r-xp 00000000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be16000-0be25000 ---p 000c0000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be25000-0be28000 r--p 000bf000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be28000-0be2c000 rw-p 000c2000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be2c000-0be2e000 rw-p 0be2c000 00:00 0 0be3e000-0bed6000 r-xp 00000000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bed6000-0bee5000 ---p 00098000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee5000-0bee8000 r--p 00097000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee8000-0beeb000 rw-p 0009a000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0beeb000-0beed000 rw-p 0beeb000 00:00 0 0befd000-0bf9a000 r-xp 00000000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bf9a000-0bfaa000 ---p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfaa000-0bfad000 r--p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfad000-0bfb1000 rw-p 000a0000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfb1000-0bfb4000 rw-p 0bfb1000 00:00 0 0bfc4000-0c201000 r-xp 00000000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c201000-0c210000 ---p 0023d000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c210000-0c216000 r--p 0023c000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c216000-0c223000 rw-p 00242000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c223000-0c225000 rw-p 0c223000 00:00 0 0c235000-0c457000 r-xp 00000000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c457000-0c466000 ---p 00222000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c466000-0c46e000 r--p 00221000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c46e000-0c47a000 rw-p 00229000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c47a000-0c486000 rw-p 0c47a000 00:00 0 0c496000-0c7a4000 r-xp 00000000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7a4000-0c7b3000 ---p 0030e000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7b3000-0c7bb000 r--p 0030d000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7bb000-0c7cb000 rw-p 00315000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7cb000-0c7cd000 rw-p 0c7cb000 00:00 0 0c7dd000-0c848000 r-xp 00000000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c848000-0c857000 ---p 0006b000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c857000-0c859000 r--p 0006a000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c859000-0c85b000 rw-p 0006c000 09:00 4816926 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/usr/lib/libccolamd.so.3.1.0 0ea26000-0eaf7000 r-xp 00000000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eaf7000-0eb07000 ---p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb07000-0eb09000 r--p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb09000-0eb0a000 rw-p 000d3000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb1a000-0eb22000 r-xp 00000000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb22000-0eb31000 ---p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb31000-0eb32000 r--p 00007000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb32000-0eb33000 rw-p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb43000-0eb4e000 r-xp 00000000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb4e000-0eb5d000 ---p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5d000-0eb5e000 r--p 0000a000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5e000-0eb5f000 rw-p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb6f000-0eb79000 r-xp 00000000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb79000-0eb88000 ---p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb88000-0eb89000 r--p 00009000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb89000-0eb8a000 rw-p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb9a000-0ec54000 r-xp 00000000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec54000-0ec64000 ---p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec64000-0ec67000 r--p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec67000-0ec68000 rw-p 000bd000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec78000-0ecce000 r-xp 00000000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecce000-0ecdd000 ---p 00056000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdd000-0ecdf000 r--p 00055000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdf000-0ece0000 rw-p 00057000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ece0000-0ece2000 rw-p 0ece0000 00:00 0 0ecf2000-0f584000 r-xp 00000000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f584000-0f594000 ---p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f594000-0f59f000 r--p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f59f000-0f5a3000 rw-p 0089d000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f5a3000-0f5a7000 rw-p 0f5a3000 00:00 0 0f5b7000-0ff89000 r-xp 00000000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff89000-0ff98000 ---p 009d2000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff98000-0ffbc000 r--p 009d1000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffbc000-0ffc3000 rw-p 009f5000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffc3000-0ffc5000 rw-p 0ffc3000 00:00 0 0ffd5000-0ffdf000 r-xp 00000000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffdf000-0ffee000 ---p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffee000-0ffef000 r--p 00009000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffef000-0fff0000 rw-p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 10000000-10002000 r-xp 00000000 09:00 4492233 /usr/bin/octave-3.0.1 10012000-10013000 r--p 00002000 09:00 4492233 /usr/bin/octave-3.0.1 10013000-10014000 rw-p 00003000 09:00 4492233 /usr/bin/octave-3.0.1 10014000-12261000 rwxp 10014000 00:00 0 [heap] 40000000-4001f000 r-xp 00000000 09:00 4490521 /lib/ld-2.9.so 4001f000-40023000 rw-p 4001f000 00:00 0 40027000-4002d000 rw-p 40027000 00:00 0 4002f000-40030000 r--p 0001f000 09:00 4490521 /lib/ld-2.9.so 40030000-40031000 rw-p 00020000 09:00 4490521 /lib/ld-2.9.so 40031000-401de000 rw-p 40031000 00:00 0 ffd10000-ffd25000 rw-p ffd10000 00:00 0 [stack] panic: Aborted -- stopping myself... attempting to save variables to `octave-core'... save to `octave-core' complete Aborted OK ../data/regression/KRR_Gaussian_1_1en06_15.m *** glibc detected *** octave: double free or corruption (fasttop): 0x11d32448 *** ======= Backtrace: ========= /lib/libc.so.6[0xd554228] /lib/libc.so.6(cfree+0xcc)[0xd55610c] /usr/lib/libstdc++.so.6(_ZdlPv+0x2c)[0xd779a6c] /usr/lib/libstdc++.so.6(_ZNSs4_Rep10_M_destroyERKSaIcE+0x24)[0xd745be4] /usr/lib/libstdc++.so.6(_ZNSsD1Ev+0x84)[0xd748154] /lib/libc.so.6(exit+0xfc)[0xd50dc9c] /usr/lib/octave-3.0.1/liboctinterp.so[0xf95fa2c] /usr/lib/octave-3.0.1/liboctinterp.so(octave_main+0xed0)[0xf8f7910] octave(main+0x14)[0x10001b84] /lib/libc.so.6[0xd4f1be4] /lib/libc.so.6[0xd4f1da0] ======= Memory map: ======== 00100000-00103000 r-xp 00100000 00:00 0 0bd56000-0be16000 r-xp 00000000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be16000-0be25000 ---p 000c0000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be25000-0be28000 r--p 000bf000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be28000-0be2c000 rw-p 000c2000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be2c000-0be2e000 rw-p 0be2c000 00:00 0 0be3e000-0bed6000 r-xp 00000000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bed6000-0bee5000 ---p 00098000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee5000-0bee8000 r--p 00097000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee8000-0beeb000 rw-p 0009a000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0beeb000-0beed000 rw-p 0beeb000 00:00 0 0befd000-0bf9a000 r-xp 00000000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bf9a000-0bfaa000 ---p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfaa000-0bfad000 r--p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfad000-0bfb1000 rw-p 000a0000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfb1000-0bfb4000 rw-p 0bfb1000 00:00 0 0bfc4000-0c201000 r-xp 00000000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c201000-0c210000 ---p 0023d000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c210000-0c216000 r--p 0023c000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c216000-0c223000 rw-p 00242000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c223000-0c225000 rw-p 0c223000 00:00 0 0c235000-0c457000 r-xp 00000000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c457000-0c466000 ---p 00222000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c466000-0c46e000 r--p 00221000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c46e000-0c47a000 rw-p 00229000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c47a000-0c486000 rw-p 0c47a000 00:00 0 0c496000-0c7a4000 r-xp 00000000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7a4000-0c7b3000 ---p 0030e000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7b3000-0c7bb000 r--p 0030d000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7bb000-0c7cb000 rw-p 00315000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7cb000-0c7cd000 rw-p 0c7cb000 00:00 0 0c7dd000-0c848000 r-xp 00000000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c848000-0c857000 ---p 0006b000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c857000-0c859000 r--p 0006a000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c859000-0c85b000 rw-p 0006c000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c85b000-0c85d000 rw-p 0c85b000 00:00 0 0c86d000-0c941000 r-xp 00000000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c941000-0c951000 ---p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c951000-0c954000 r--p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c954000-0c958000 rw-p 000d7000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c958000-0c95b000 rw-p 0c958000 00:00 0 0c96b000-0ca41000 r-xp 00000000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca41000-0ca51000 ---p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca51000-0ca54000 r--p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca54000-0ca5a000 rw-p 000d9000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca5a000-0ca5c000 rw-p 0ca5a000 00:00 0 0ca6c000-0cae8000 r-xp 00000000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cae8000-0caf8000 ---p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0caf8000-0cafa000 r--p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafa000-0cafd000 rw-p 0007e000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafd000-0caff000 rw-p 0cafd000 00:00 0 0cb0f000-0d0ac000 r-xp 00000000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0ac000-0d0bb000 ---p 0059d000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0bb000-0d0c1000 r--p 0059c000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0c1000-0d0c4000 rw-p 005a2000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0d4000-0d0f5000 r-xp 00000000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d0f5000-0d105000 ---p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d105000-0d106000 r--p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d106000-0d107000 rw-p 00022000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d117000-0d139000 r-xp 00000000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d139000-0d148000 ---p 00022000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d148000-0d14a000 r--p 00021000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d14a000-0d14b000 rw-p 00023000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d15b000-0d17d000 r-xp 00000000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d17d000-0d18d000 ---p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18d000-0d18e000 r--p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18e000-0d18f000 rw-p 00023000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d19f000-0d2dc000 r-xp 00000000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2dc000-0d2eb000 ---p 0013d000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2eb000-0d2f0000 r--p 0013c000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f0000-0d2f6000 rw-p 00141000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f6000-0d2f9000 rw-p 0d2f6000 00:00 0 0d309000-0d323000 r-xp 00000000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d323000-0d332000 ---p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d332000-0d333000 r--p 00019000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d333000-0d334000 rw-p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d344000-0d351000 r-xp 00000000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d351000-0d360000 ---p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d360000-0d361000 r--p 0000c000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d361000-0d362000 rw-p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d372000-0d387000 r-xp 00000000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d387000-0d396000 ---p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d396000-0d397000 r--p 00014000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d397000-0d398000 rw-p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d3a8000-0d3bb000 r-xp 00000000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3bb000-0d3cb000 ---p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cb000-0d3cc000 r--p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cc000-0d3cd000 rw-p 00014000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3dd000-0d3e9000 r-xp 00000000 09:00 4490531 /lib/libnss_files-2.9.so 0d3e9000-0d3f8000 ---p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f8000-0d3f9000 r--p 0000b000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f9000-0d3fa000 rw-p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d40a000-0d415000 r-xp 00000000 09:00 4490533 /lib/libnss_nis-2.9.so 0d415000-0d424000 ---p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d424000-0d425000 r--p 0000a000 09:00 4490533 /lib/libnss_nis-2.9.so 0d425000-0d426000 rw-p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d436000-0d44d000 r-xp 00000000 09:00 4490528 /lib/libnsl-2.9.so 0d44d000-0d45c000 ---p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45c000-0d45d000 r--p 00016000 09:00 4490528 /lib/libnsl-2.9.so 0d45d000-0d45e000 rw-p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45e000-0d460000 rw-p 0d45e000 00:00 0 0d470000-0d478000 r-xp 00000000 09:00 4490529 /lib/libnss_compat-2.9.so 0d478000-0d487000 ---p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d487000-0d488000 r--p 00007000 09:00 4490529 /lib/libnss_compat-2.9.so 0d488000-0d489000 rw-p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d499000-0d4b0000 r-xp 00000000 09:00 4490535 /lib/libpthread-2.9.so 0d4b0000-0d4bf000 ---p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4bf000-0d4c0000 r--p 00016000 09:00 4490535 /lib/libpthread-2.9.so 0d4c0000-0d4c1000 rw-p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4c1000-0d4c3000 rw-p 0d4c1000 00:00 0 0d4d3000-0d636000 r-xp 00000000 09:00 4490523 /lib/libc-2.9.so 0d636000-0d646000 ---p 00163000 09:00 4490523 /lib/libc-2.9.so 0d646000-0d64a000 r--p 00163000 09:00 4490523 /lib/libc-2.9.so 0d64a000-0d64b000 rw-p 00167000 09:00 4490523 /lib/libc-2.9.so 0d64b000-0d64e000 rw-p 0d64b000 00:00 0 0d65e000-0d674000 r-xp 00000000 09:00 4491671 /lib/libgcc_s.so.1 0d674000-0d683000 ---p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d683000-0d684000 r--p 00015000 09:00 4491671 /lib/libgcc_s.so.1 0d684000-0d685000 rw-p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d695000-0d7b1000 r-xp 00000000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7b1000-0d7c1000 ---p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c1000-0d7c5000 r--p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c5000-0d7c7000 rw-p 00120000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c7000-0d7cc000 rw-p 0d7c7000 00:00 0 0d7dc000-0d885000 r-xp 00000000 09:00 4490527 /lib/libm-2.9.so 0d885000-0d895000 ---p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d895000-0d898000 r--p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d898000-0d899000 rw-p 000ac000 09:00 4490527 /lib/libm-2.9.so 0d8a9000-0d965000 r-xp 00000000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d965000-0d974000 ---p 000bc000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d974000-0d976000 r--p 000bb000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d976000-0d977000 rw-p 000bd000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d987000-0d99c000 r-xp 00000000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d99c000-0d9ab000 ---p 00015000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9ab000-0d9ac000 rw-p 00014000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9bc000-0daf8000 r-xp 00000000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0daf8000-0db08000 ---p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db08000-0db0f000 rw-p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db1f000-0db22000 r-xp 00000000 09:00 4490526 /lib/libdl-2.9.so 0db22000-0db31000 ---p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db31000-0db32000 r--p 00002000 09:00 4490526 /lib/libdl-2.9.so 0db32000-0db33000 rw-p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db43000-0db7b000 r-xp 00000000 09:00 4490518 /lib/libncurses.so.5.7 0db7b000-0db8b000 ---p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8b000-0db8d000 r--p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8d000-0db8e000 rw-p 0003a000 09:00 4490518 /lib/libncurses.so.5.7 0db9e000-0dbd9000 r-xp 00000000 09:00 4491902 /lib/libreadline.so.5.2 0dbd9000-0dbe8000 ---p 0003b000 09:00 4491902 /lib/libreadline.so.5.2 0dbe8000-0dbed000 rw-p 0003a000 09:00 4491902 /lib/libreadline.so.5.2 0dbed000-0dbee000 rw-p 0dbed000 00:00 0 0dbfe000-0dc97000 r-xp 00000000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dc97000-0dca7000 ---p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dca7000-0dcac000 r--p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcac000-0dcad000 rw-p 0009e000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcbd000-0e295000 r-xp 00000000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e295000-0e2a4000 ---p 005d8000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2a4000-0e2ab000 r--p 005d7000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2ab000-0e2ae000 rw-p 005de000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2be000-0e86a000 r-xp 00000000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e86a000-0e879000 ---p 005ac000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e879000-0e881000 r--p 005ab000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e881000-0e884000 rw-p 005b3000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e884000-0e991000 rw-p 0e884000 00:00 0 0e9a1000-0e9d7000 r-xp 00000000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9d7000-0e9e6000 ---p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e6000-0e9e7000 r--p 00035000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e7000-0e9e8000 rw-p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9f8000-0ea05000 r-xp 00000000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea05000-0ea14000 ---p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea14000-0ea15000 r--p 0000c000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea15000-0ea16000 rw-p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea26000-0eaf7000 r-xp 00000000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eaf7000-0eb07000 ---p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb07000-0eb09000 r--p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb09000-0eb0a000 rw-p 000d3000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb1a000-0eb22000 r-xp 00000000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb22000-0eb31000 ---p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb31000-0eb32000 r--p 00007000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb32000-0eb33000 rw-p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb43000-0eb4e000 r-xp 00000000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb4e000-0eb5d000 ---p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5d000-0eb5e000 r--p 0000a000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5e000-0eb5f000 rw-p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb6f000-0eb79000 r-xp 00000000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb79000-0eb88000 ---p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb88000-0eb89000 r--p 00009000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb89000-0eb8a000 rw-p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb9a000-0ec54000 r-xp 00000000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec54000-0ec64000 ---p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec64000-0ec67000 r--p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec67000-0ec68000 rw-p 000bd000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec78000-0ecce000 r-xp 00000000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecce000-0ecdd000 ---p 00056000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdd000-0ecdf000 r--p 00055000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdf000-0ece0000 rw-p 00057000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ece0000-0ece2000 rw-p 0ece0000 00:00 0 0ecf2000-0f584000 r-xp 00000000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f584000-0f594000 ---p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f594000-0f59f000 r--p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f59f000-0f5a3000 rw-p 0089d000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f5a3000-0f5a7000 rw-p 0f5a3000 00:00 0 0f5b7000-0ff89000 r-xp 00000000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff89000-0ff98000 ---p 009d2000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff98000-0ffbc000 r--p 009d1000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffbc000-0ffc3000 rw-p 009f5000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffc3000-0ffc5000 rw-p 0ffc3000 00:00 0 0ffd5000-0ffdf000 r-xp 00000000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffdf000-0ffee000 ---p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffee000-0ffef000 r--p 00009000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffef000-0fff0000 rw-p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 10000000-10002000 r-xp 00000000 09:00 4492233 /usr/bin/octave-3.0.1 10012000-10013000 r--p 00002000 09:00 4492233 /usr/bin/octave-3.0.1 10013000-10014000 rw-p 00003000 09:00 4492233 /usr/bin/octave-3.0.1 10014000-12264000 rwxp 10014000 00:00 0 [heap] 40000000-4001f000 r-xp 00000000 09:00 4490521 /lib/ld-2.9.so 4001f000-40023000 rw-p 4001f000 00:00 0 40027000-4002d000 rw-p 40027000 00:00 0 4002f000-40030000 r--p 0001f000 09:00 4490521 /lib/ld-2.9.so 40030000-40031000 rw-p 00020000 09:00 4490521 /lib/ld-2.9.so 40031000-401de000 rw-p 40031000 00:00 0 ffdd1000-ffde6000 rw-p ffdd1000 00:00 0 [stack] panic: Aborted -- stopping myself... attempting to save variables to `octave-core'... save to `octave-core' complete Aborted OK ../data/regression/LibSVR_0017_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_023_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_15_1_15_1en05_Gaussian_001.m *** glibc detected *** octave: double free or corruption (fasttop): 0x11d32638 *** ======= Backtrace: ========= /lib/libc.so.6[0xd554228] /lib/libc.so.6(cfree+0xcc)[0xd55610c] /usr/lib/libstdc++.so.6(_ZdlPv+0x2c)[0xd779a6c] /usr/lib/libstdc++.so.6(_ZNSs4_Rep10_M_destroyERKSaIcE+0x24)[0xd745be4] /usr/lib/libstdc++.so.6(_ZNSsD1Ev+0x84)[0xd748154] /lib/libc.so.6(exit+0xfc)[0xd50dc9c] /usr/lib/octave-3.0.1/liboctinterp.so[0xf95fa2c] /usr/lib/octave-3.0.1/liboctinterp.so(octave_main+0xed0)[0xf8f7910] octave(main+0x14)[0x10001b84] /lib/libc.so.6[0xd4f1be4] /lib/libc.so.6[0xd4f1da0] ======= Memory map: ======== 00100000-00103000 r-xp 00100000 00:00 0 0bd56000-0be16000 r-xp 00000000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be16000-0be25000 ---p 000c0000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be25000-0be28000 r--p 000bf000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be28000-0be2c000 rw-p 000c2000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be2c000-0be2e000 rw-p 0be2c000 00:00 0 0be3e000-0bed6000 r-xp 00000000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bed6000-0bee5000 ---p 00098000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee5000-0bee8000 r--p 00097000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee8000-0beeb000 rw-p 0009a000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0beeb000-0beed000 rw-p 0beeb000 00:00 0 0befd000-0bf9a000 r-xp 00000000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bf9a000-0bfaa000 ---p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfaa000-0bfad000 r--p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfad000-0bfb1000 rw-p 000a0000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfb1000-0bfb4000 rw-p 0bfb1000 00:00 0 0bfc4000-0c201000 r-xp 00000000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c201000-0c210000 ---p 0023d000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c210000-0c216000 r--p 0023c000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c216000-0c223000 rw-p 00242000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c223000-0c225000 rw-p 0c223000 00:00 0 0c235000-0c457000 r-xp 00000000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c457000-0c466000 ---p 00222000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c466000-0c46e000 r--p 00221000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c46e000-0c47a000 rw-p 00229000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c47a000-0c486000 rw-p 0c47a000 00:00 0 0c496000-0c7a4000 r-xp 00000000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7a4000-0c7b3000 ---p 0030e000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7b3000-0c7bb000 r--p 0030d000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7bb000-0c7cb000 rw-p 00315000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7cb000-0c7cd000 rw-p 0c7cb000 00:00 0 0c7dd000-0c848000 r-xp 00000000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c848000-0c857000 ---p 0006b000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c857000-0c859000 r--p 0006a000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c859000-0c85b000 rw-p 0006c000 09:00 4816926 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/usr/lib/libccolamd.so.3.1.0 0ea26000-0eaf7000 r-xp 00000000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eaf7000-0eb07000 ---p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb07000-0eb09000 r--p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb09000-0eb0a000 rw-p 000d3000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb1a000-0eb22000 r-xp 00000000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb22000-0eb31000 ---p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb31000-0eb32000 r--p 00007000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb32000-0eb33000 rw-p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb43000-0eb4e000 r-xp 00000000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb4e000-0eb5d000 ---p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5d000-0eb5e000 r--p 0000a000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5e000-0eb5f000 rw-p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb6f000-0eb79000 r-xp 00000000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb79000-0eb88000 ---p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb88000-0eb89000 r--p 00009000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb89000-0eb8a000 rw-p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb9a000-0ec54000 r-xp 00000000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec54000-0ec64000 ---p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec64000-0ec67000 r--p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec67000-0ec68000 rw-p 000bd000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec78000-0ecce000 r-xp 00000000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecce000-0ecdd000 ---p 00056000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdd000-0ecdf000 r--p 00055000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdf000-0ece0000 rw-p 00057000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ece0000-0ece2000 rw-p 0ece0000 00:00 0 0ecf2000-0f584000 r-xp 00000000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f584000-0f594000 ---p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f594000-0f59f000 r--p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f59f000-0f5a3000 rw-p 0089d000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f5a3000-0f5a7000 rw-p 0f5a3000 00:00 0 0f5b7000-0ff89000 r-xp 00000000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff89000-0ff98000 ---p 009d2000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff98000-0ffbc000 r--p 009d1000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffbc000-0ffc3000 rw-p 009f5000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffc3000-0ffc5000 rw-p 0ffc3000 00:00 0 0ffd5000-0ffdf000 r-xp 00000000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffdf000-0ffee000 ---p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffee000-0ffef000 r--p 00009000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffef000-0fff0000 rw-p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 10000000-10002000 r-xp 00000000 09:00 4492233 /usr/bin/octave-3.0.1 10012000-10013000 r--p 00002000 09:00 4492233 /usr/bin/octave-3.0.1 10013000-10014000 rw-p 00003000 09:00 4492233 /usr/bin/octave-3.0.1 10014000-12264000 rwxp 10014000 00:00 0 [heap] 40000000-4001f000 r-xp 00000000 09:00 4490521 /lib/ld-2.9.so 4001f000-40023000 rw-p 4001f000 00:00 0 40027000-4002d000 rw-p 40027000 00:00 0 4002f000-40030000 r--p 0001f000 09:00 4490521 /lib/ld-2.9.so 40030000-40031000 rw-p 00020000 09:00 4490521 /lib/ld-2.9.so 40031000-401de000 rw-p 40031000 00:00 0 ffdfd000-ffe12000 rw-p ffdfd000 00:00 0 [stack] panic: Aborted -- stopping myself... attempting to save variables to `octave-core'... save to `octave-core' complete Aborted OK ../data/regression/LibSVR_30_16_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_0001.m *** glibc detected *** octave: double free or corruption (fasttop): 0x11d32668 *** ======= Backtrace: ========= /lib/libc.so.6[0xd554228] /lib/libc.so.6(cfree+0xcc)[0xd55610c] /usr/lib/libstdc++.so.6(_ZdlPv+0x2c)[0xd779a6c] /usr/lib/libstdc++.so.6(_ZNSs4_Rep10_M_destroyERKSaIcE+0x24)[0xd745be4] /usr/lib/libstdc++.so.6(_ZNSsD1Ev+0x84)[0xd748154] /lib/libc.so.6(exit+0xfc)[0xd50dc9c] /usr/lib/octave-3.0.1/liboctinterp.so[0xf95fa2c] /usr/lib/octave-3.0.1/liboctinterp.so(octave_main+0xed0)[0xf8f7910] octave(main+0x14)[0x10001b84] /lib/libc.so.6[0xd4f1be4] /lib/libc.so.6[0xd4f1da0] ======= Memory map: ======== 00100000-00103000 r-xp 00100000 00:00 0 0bd56000-0be16000 r-xp 00000000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be16000-0be25000 ---p 000c0000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be25000-0be28000 r--p 000bf000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be28000-0be2c000 rw-p 000c2000 09:00 4816932 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct 0be2c000-0be2e000 rw-p 0be2c000 00:00 0 0be3e000-0bed6000 r-xp 00000000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bed6000-0bee5000 ---p 00098000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee5000-0bee8000 r--p 00097000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0bee8000-0beeb000 rw-p 0009a000 09:00 4816931 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct 0beeb000-0beed000 rw-p 0beeb000 00:00 0 0befd000-0bf9a000 r-xp 00000000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bf9a000-0bfaa000 ---p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfaa000-0bfad000 r--p 0009d000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfad000-0bfb1000 rw-p 000a0000 09:00 4816930 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct 0bfb1000-0bfb4000 rw-p 0bfb1000 00:00 0 0bfc4000-0c201000 r-xp 00000000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c201000-0c210000 ---p 0023d000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c210000-0c216000 r--p 0023c000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c216000-0c223000 rw-p 00242000 09:00 4816929 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct 0c223000-0c225000 rw-p 0c223000 00:00 0 0c235000-0c457000 r-xp 00000000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c457000-0c466000 ---p 00222000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c466000-0c46e000 r--p 00221000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c46e000-0c47a000 rw-p 00229000 09:00 4816928 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct 0c47a000-0c486000 rw-p 0c47a000 00:00 0 0c496000-0c7a4000 r-xp 00000000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7a4000-0c7b3000 ---p 0030e000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7b3000-0c7bb000 r--p 0030d000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7bb000-0c7cb000 rw-p 00315000 09:00 4816927 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct 0c7cb000-0c7cd000 rw-p 0c7cb000 00:00 0 0c7dd000-0c848000 r-xp 00000000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c848000-0c857000 ---p 0006b000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c857000-0c859000 r--p 0006a000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c859000-0c85b000 rw-p 0006c000 09:00 4816926 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct 0c85b000-0c85d000 rw-p 0c85b000 00:00 0 0c86d000-0c941000 r-xp 00000000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c941000-0c951000 ---p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c951000-0c954000 r--p 000d4000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c954000-0c958000 rw-p 000d7000 09:00 4816925 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct 0c958000-0c95b000 rw-p 0c958000 00:00 0 0c96b000-0ca41000 r-xp 00000000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca41000-0ca51000 ---p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca51000-0ca54000 r--p 000d6000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca54000-0ca5a000 rw-p 000d9000 09:00 4816924 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct 0ca5a000-0ca5c000 rw-p 0ca5a000 00:00 0 0ca6c000-0cae8000 r-xp 00000000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cae8000-0caf8000 ---p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0caf8000-0cafa000 r--p 0007c000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafa000-0cafd000 rw-p 0007e000 09:00 4816923 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct 0cafd000-0caff000 rw-p 0cafd000 00:00 0 0cb0f000-0d0ac000 r-xp 00000000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0ac000-0d0bb000 ---p 0059d000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0bb000-0d0c1000 r--p 0059c000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0c1000-0d0c4000 rw-p 005a2000 09:00 4524628 /usr/lib/libatlas.so.3gf.0 0d0d4000-0d0f5000 r-xp 00000000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d0f5000-0d105000 ---p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d105000-0d106000 r--p 00021000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d106000-0d107000 rw-p 00022000 09:00 4524630 /usr/lib/libf77blas.so.3gf.0 0d117000-0d139000 r-xp 00000000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d139000-0d148000 ---p 00022000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d148000-0d14a000 r--p 00021000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d14a000-0d14b000 rw-p 00023000 09:00 4524629 /usr/lib/libcblas.so.3gf.0 0d15b000-0d17d000 r-xp 00000000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d17d000-0d18d000 ---p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18d000-0d18e000 r--p 00022000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d18e000-0d18f000 rw-p 00023000 09:00 4524631 /usr/lib/liblapack_atlas.so.3gf.0 0d19f000-0d2dc000 r-xp 00000000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2dc000-0d2eb000 ---p 0013d000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2eb000-0d2f0000 r--p 0013c000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f0000-0d2f6000 rw-p 00141000 09:00 4816922 /build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct 0d2f6000-0d2f9000 rw-p 0d2f6000 00:00 0 0d309000-0d323000 r-xp 00000000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d323000-0d332000 ---p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d332000-0d333000 r--p 00019000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d333000-0d334000 rw-p 0001a000 09:00 4687464 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/max.oct 0d344000-0d351000 r-xp 00000000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d351000-0d360000 ---p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d360000-0d361000 r--p 0000c000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d361000-0d362000 rw-p 0000d000 09:00 4687449 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/find.oct 0d372000-0d387000 r-xp 00000000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d387000-0d396000 ---p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d396000-0d397000 r--p 00014000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d397000-0d398000 rw-p 00015000 09:00 4687430 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/cellfun.oct 0d3a8000-0d3bb000 r-xp 00000000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3bb000-0d3cb000 ---p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cb000-0d3cc000 r--p 00013000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3cc000-0d3cd000 rw-p 00014000 09:00 4687441 /usr/lib/octave/3.0.1/oct/powerpc-unknown-linux-gnu/dispatch.oct 0d3dd000-0d3e9000 r-xp 00000000 09:00 4490531 /lib/libnss_files-2.9.so 0d3e9000-0d3f8000 ---p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f8000-0d3f9000 r--p 0000b000 09:00 4490531 /lib/libnss_files-2.9.so 0d3f9000-0d3fa000 rw-p 0000c000 09:00 4490531 /lib/libnss_files-2.9.so 0d40a000-0d415000 r-xp 00000000 09:00 4490533 /lib/libnss_nis-2.9.so 0d415000-0d424000 ---p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d424000-0d425000 r--p 0000a000 09:00 4490533 /lib/libnss_nis-2.9.so 0d425000-0d426000 rw-p 0000b000 09:00 4490533 /lib/libnss_nis-2.9.so 0d436000-0d44d000 r-xp 00000000 09:00 4490528 /lib/libnsl-2.9.so 0d44d000-0d45c000 ---p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45c000-0d45d000 r--p 00016000 09:00 4490528 /lib/libnsl-2.9.so 0d45d000-0d45e000 rw-p 00017000 09:00 4490528 /lib/libnsl-2.9.so 0d45e000-0d460000 rw-p 0d45e000 00:00 0 0d470000-0d478000 r-xp 00000000 09:00 4490529 /lib/libnss_compat-2.9.so 0d478000-0d487000 ---p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d487000-0d488000 r--p 00007000 09:00 4490529 /lib/libnss_compat-2.9.so 0d488000-0d489000 rw-p 00008000 09:00 4490529 /lib/libnss_compat-2.9.so 0d499000-0d4b0000 r-xp 00000000 09:00 4490535 /lib/libpthread-2.9.so 0d4b0000-0d4bf000 ---p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4bf000-0d4c0000 r--p 00016000 09:00 4490535 /lib/libpthread-2.9.so 0d4c0000-0d4c1000 rw-p 00017000 09:00 4490535 /lib/libpthread-2.9.so 0d4c1000-0d4c3000 rw-p 0d4c1000 00:00 0 0d4d3000-0d636000 r-xp 00000000 09:00 4490523 /lib/libc-2.9.so 0d636000-0d646000 ---p 00163000 09:00 4490523 /lib/libc-2.9.so 0d646000-0d64a000 r--p 00163000 09:00 4490523 /lib/libc-2.9.so 0d64a000-0d64b000 rw-p 00167000 09:00 4490523 /lib/libc-2.9.so 0d64b000-0d64e000 rw-p 0d64b000 00:00 0 0d65e000-0d674000 r-xp 00000000 09:00 4491671 /lib/libgcc_s.so.1 0d674000-0d683000 ---p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d683000-0d684000 r--p 00015000 09:00 4491671 /lib/libgcc_s.so.1 0d684000-0d685000 rw-p 00016000 09:00 4491671 /lib/libgcc_s.so.1 0d695000-0d7b1000 r-xp 00000000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7b1000-0d7c1000 ---p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c1000-0d7c5000 r--p 0011c000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c5000-0d7c7000 rw-p 00120000 09:00 4524327 /usr/lib/libstdc++.so.6.0.10 0d7c7000-0d7cc000 rw-p 0d7c7000 00:00 0 0d7dc000-0d885000 r-xp 00000000 09:00 4490527 /lib/libm-2.9.so 0d885000-0d895000 ---p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d895000-0d898000 r--p 000a9000 09:00 4490527 /lib/libm-2.9.so 0d898000-0d899000 rw-p 000ac000 09:00 4490527 /lib/libm-2.9.so 0d8a9000-0d965000 r-xp 00000000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d965000-0d974000 ---p 000bc000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d974000-0d976000 r--p 000bb000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d976000-0d977000 rw-p 000bd000 09:00 4524553 /usr/lib/libgfortran.so.3.0.0 0d987000-0d99c000 r-xp 00000000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d99c000-0d9ab000 ---p 00015000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9ab000-0d9ac000 rw-p 00014000 09:00 4524426 /usr/lib/libz.so.1.2.3.3 0d9bc000-0daf8000 r-xp 00000000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0daf8000-0db08000 ---p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db08000-0db0f000 rw-p 0013c000 09:00 4525150 /usr/lib/libhdf5-1.6.6.so.0.0.0 0db1f000-0db22000 r-xp 00000000 09:00 4490526 /lib/libdl-2.9.so 0db22000-0db31000 ---p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db31000-0db32000 r--p 00002000 09:00 4490526 /lib/libdl-2.9.so 0db32000-0db33000 rw-p 00003000 09:00 4490526 /lib/libdl-2.9.so 0db43000-0db7b000 r-xp 00000000 09:00 4490518 /lib/libncurses.so.5.7 0db7b000-0db8b000 ---p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8b000-0db8d000 r--p 00038000 09:00 4490518 /lib/libncurses.so.5.7 0db8d000-0db8e000 rw-p 0003a000 09:00 4490518 /lib/libncurses.so.5.7 0db9e000-0dbd9000 r-xp 00000000 09:00 4491902 /lib/libreadline.so.5.2 0dbd9000-0dbe8000 ---p 0003b000 09:00 4491902 /lib/libreadline.so.5.2 0dbe8000-0dbed000 rw-p 0003a000 09:00 4491902 /lib/libreadline.so.5.2 0dbed000-0dbee000 rw-p 0dbed000 00:00 0 0dbfe000-0dc97000 r-xp 00000000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dc97000-0dca7000 ---p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dca7000-0dcac000 r--p 00099000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcac000-0dcad000 rw-p 0009e000 09:00 4525120 /usr/lib/libfftw3.so.3.1.2 0dcbd000-0e295000 r-xp 00000000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e295000-0e2a4000 ---p 005d8000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2a4000-0e2ab000 r--p 005d7000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2ab000-0e2ae000 rw-p 005de000 09:00 4671668 /usr/lib/atlas/libblas.so.3gf.0 0e2be000-0e86a000 r-xp 00000000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e86a000-0e879000 ---p 005ac000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e879000-0e881000 r--p 005ab000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e881000-0e884000 rw-p 005b3000 09:00 4671669 /usr/lib/atlas/liblapack.so.3gf.0 0e884000-0e991000 rw-p 0e884000 00:00 0 0e9a1000-0e9d7000 r-xp 00000000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9d7000-0e9e6000 ---p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e6000-0e9e7000 r--p 00035000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9e7000-0e9e8000 rw-p 00036000 09:00 4525208 /usr/lib/libcxsparse.so.3.1.0 0e9f8000-0ea05000 r-xp 00000000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea05000-0ea14000 ---p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea14000-0ea15000 r--p 0000c000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea15000-0ea16000 rw-p 0000d000 09:00 4525203 /usr/lib/libccolamd.so.3.1.0 0ea26000-0eaf7000 r-xp 00000000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eaf7000-0eb07000 ---p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb07000-0eb09000 r--p 000d1000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb09000-0eb0a000 rw-p 000d3000 09:00 4525209 /usr/lib/libcholmod.so.3.1.0 0eb1a000-0eb22000 r-xp 00000000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb22000-0eb31000 ---p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb31000-0eb32000 r--p 00007000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb32000-0eb33000 rw-p 00008000 09:00 4525204 /usr/lib/libcolamd.so.3.1.0 0eb43000-0eb4e000 r-xp 00000000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb4e000-0eb5d000 ---p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5d000-0eb5e000 r--p 0000a000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb5e000-0eb5f000 rw-p 0000b000 09:00 4525201 /usr/lib/libcamd.so.3.1.0 0eb6f000-0eb79000 r-xp 00000000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb79000-0eb88000 ---p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb88000-0eb89000 r--p 00009000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb89000-0eb8a000 rw-p 0000a000 09:00 4525200 /usr/lib/libamd.so.3.1.0 0eb9a000-0ec54000 r-xp 00000000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec54000-0ec64000 ---p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec64000-0ec67000 r--p 000ba000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec67000-0ec68000 rw-p 000bd000 09:00 4525210 /usr/lib/libumfpack.so.3.1.0 0ec78000-0ecce000 r-xp 00000000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecce000-0ecdd000 ---p 00056000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdd000-0ecdf000 r--p 00055000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ecdf000-0ece0000 rw-p 00057000 09:00 4687504 /usr/lib/octave-3.0.1/libcruft.so.3.0.1 0ece0000-0ece2000 rw-p 0ece0000 00:00 0 0ecf2000-0f584000 r-xp 00000000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f584000-0f594000 ---p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f594000-0f59f000 r--p 00892000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f59f000-0f5a3000 rw-p 0089d000 09:00 4687505 /usr/lib/octave-3.0.1/liboctave.so.3.0.1 0f5a3000-0f5a7000 rw-p 0f5a3000 00:00 0 0f5b7000-0ff89000 r-xp 00000000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff89000-0ff98000 ---p 009d2000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ff98000-0ffbc000 r--p 009d1000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffbc000-0ffc3000 rw-p 009f5000 09:00 4687506 /usr/lib/octave-3.0.1/liboctinterp.so.3.0.1 0ffc3000-0ffc5000 rw-p 0ffc3000 00:00 0 0ffd5000-0ffdf000 r-xp 00000000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffdf000-0ffee000 ---p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffee000-0ffef000 r--p 00009000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 0ffef000-0fff0000 rw-p 0000a000 09:00 4554763 /usr/lib/libfakeroot/libfakeroot-sysv.so 10000000-10002000 r-xp 00000000 09:00 4492233 /usr/bin/octave-3.0.1 10012000-10013000 r--p 00002000 09:00 4492233 /usr/bin/octave-3.0.1 10013000-10014000 rw-p 00003000 09:00 4492233 /usr/bin/octave-3.0.1 10014000-12264000 rwxp 10014000 00:00 0 [heap] 40000000-4001f000 r-xp 00000000 09:00 4490521 /lib/ld-2.9.so 4001f000-40023000 rw-p 4001f000 00:00 0 40027000-4002d000 rw-p 40027000 00:00 0 4002f000-40030000 r--p 0001f000 09:00 4490521 /lib/ld-2.9.so 40030000-40031000 rw-p 00020000 09:00 4490521 /lib/ld-2.9.so 40031000-401de000 rw-p 40031000 00:00 0 ffa72000-ffa87000 rw-p ffa72000 00:00 0 [stack] panic: Aborted -- stopping myself... attempting to save variables to `octave-core'... save to `octave-core' complete Aborted OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_001.m OK ../data/regression/LibSVR_30_1_15_1en05_Gaussian_001.m OK cd ../examples/octave-modular && ( OCTAVE_LOADPATH="/build/buildd/shogun-0.6.7/debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun:" ./check.sh ) running all_classifier.m .../check.sh: line 2: 29809 Aborted octave "$e" > /dev/null 2>&1 ERROR running all_clustering.m .. OK running all_distance.m .. OK running all_distribution.m .. OK running all_kernels.m .. OK running all_preproc.m .. OK running all_regression.m .. OK running libsvm.m .. OK make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-octave-modular' touch debian/stamp-install-octave-modular dh_installdirs -pshogun-octave dh_install -pshogun-octave build-octave/sg.oct /usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu octave-depends /usr/bin/make -C build-octave tests DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-octave make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-octave' cd ../testsuite/octave && ( OCTAVE_LOADPATH="/build/buildd/shogun-0.6.7/debian/shogun-octave/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu:" ./test_all.sh - octave ) *** Testing in ../data/classifier/*.m ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_16.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_0017_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_023_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_15_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/KNN_EuclidianDistance_1_3.m OK ../data/classifier/LDA_1_01.m OK ../data/classifier/LibLinear_0017_1_1en05_True.m OK ../data/classifier/LibLinear_023_1_1en05_True.m OK ../data/classifier/LibLinear_15_1_1en05_True.m OK ../data/classifier/LibLinear_30_16_1en05_True.m OK ../data/classifier/LibLinear_30_1_1en05_True.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/Perceptron_01_1_1000.m OK ../data/classifier/SVMLin_0017_1_1en05_True.m OK ../data/classifier/SVMLin_023_1_1en05_True.m OK ../data/classifier/SVMLin_15_1_1en05_True.m OK ../data/classifier/SVMLin_30_16_1en05_True.m OK ../data/classifier/SVMLin_30_1_1en05_True.m OK ../data/classifier/SVMOcas_0017_1_1en05_False.m OK ../data/classifier/SVMOcas_023_1_1en05_False.m OK ../data/classifier/SVMOcas_15_1_1en05_False.m OK ../data/classifier/SVMOcas_30_16_1en05_False.m ERROR GNU Octave, version 3.0.1 Copyright (C) 2008 John W. Eaton and others. This is free software; see the source code for copying conditions. There is ABSOLUTELY NO WARRANTY; not even for MERCHANTIBILITY or FITNESS FOR A PARTICULAR PURPOSE. For details, type `warranty'. Octave was configured for "powerpc-unknown-linux-gnu". Additional information about Octave is available at http://www.octave.org. Please contribute if you find this software useful. For more information, visit http://www.octave.org/help-wanted.html Report bugs to (but first, please read http://www.octave.org/bugs.html to learn how to write a helpful report). For information about changes from previous versions, type `news'. shogun (sg.oct/ppc/v0.6.7_r3445_2008-11-14_09:47_3445) Copyright (C) 1999-2008 Fraunhofer Institute FIRST and Max-Planck-Society Written (W) 2000-2008 Soeren Sonnenburg, Gunnar Raetsch et al. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. ( configure options: "configure options --disable-cpudetection --prefix=/usr --interface=octave" compile flags: " -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC" link flags: "-shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas" ) ( seeding random number generator with 644155526 (seed size 256)) determined range for x in log(1+exp(-x)) is:37 ) alphas: 0.000000e+00, bias: 0.000000e+00, sv: 0.000000e+00, classified: 1.258481e-04 <--- accuracy: 1.000000e-04 ans = 0 ../data/classifier/SVMOcas_30_1_1en05_False.m ERROR GNU Octave, version 3.0.1 Copyright (C) 2008 John W. Eaton and others. This is free software; see the source code for copying conditions. There is ABSOLUTELY NO WARRANTY; not even for MERCHANTIBILITY or FITNESS FOR A PARTICULAR PURPOSE. For details, type `warranty'. Octave was configured for "powerpc-unknown-linux-gnu". Additional information about Octave is available at http://www.octave.org. Please contribute if you find this software useful. For more information, visit http://www.octave.org/help-wanted.html Report bugs to (but first, please read http://www.octave.org/bugs.html to learn how to write a helpful report). For information about changes from previous versions, type `news'. shogun (sg.oct/ppc/v0.6.7_r3445_2008-11-14_09:47_3445) Copyright (C) 1999-2008 Fraunhofer Institute FIRST and Max-Planck-Society Written (W) 2000-2008 Soeren Sonnenburg, Gunnar Raetsch et al. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. ( configure options: "configure options --disable-cpudetection --prefix=/usr --interface=octave" compile flags: " -g -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O2 -pthread -fPIC" link flags: "-shared -L /usr/lib/octave-3.0.1 -loctinterp -loctave -lcruft -Xlinker --no-undefined -lm -pthread -llapack_atlas -llapack -lcblas" ) ( seeding random number generator with 2029732128 (seed size 256)) determined range for x in log(1+exp(-x)) is:37 ) alphas: 0.000000e+00, bias: 0.000000e+00, sv: 0.000000e+00, classified: 1.258481e-04 <--- accuracy: 1.000000e-04 ans = 0 ../data/classifier/SVMSGD_0017_1_1en05_True.m OK ../data/classifier/SVMSGD_023_1_1en05_True.m OK ../data/classifier/SVMSGD_15_1_1en05_True.m OK ../data/classifier/SVMSGD_30_16_1en05_True.m OK ../data/classifier/SVMSGD_30_1_1en05_True.m OK ../data/classifier/SubGradientSVM_05_0017_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_023_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_15_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_30_16_1en05_False.m OK ../data/classifier/SubGradientSVM_05_30_1_1en05_False.m OK *** Testing in ../data/clustering/*.m ../data/clustering/Hierarchical_EuclidianDistance_3.m OK ../data/clustering/KMeans_EuclidianDistance_3.m OK *** Testing in ../data/distance/*.m ../data/distance/BrayCurtisDistance_fnord.m OK ../data/distance/CanberraMetric_fnord.m OK ../data/distance/CanberraWordDistance_60_0_False_DNA_3.m OK ../data/distance/ChebyshewMetric_fnord.m OK ../data/distance/ChiSquareDistance_fnord.m OK ../data/distance/CosineDistance_fnord.m OK ../data/distance/EuclidianDistance_fnord.m OK ../data/distance/GeodesicMetric_fnord.m OK ../data/distance/HammingWordDistance_60_0_False_False_DNA_3.m OK ../data/distance/HammingWordDistance_60_0_False_True_DNA_3.m OK ../data/distance/JensenMetric_fnord.m OK ../data/distance/ManhattanMetric_fnord.m OK ../data/distance/ManhattanWordDistance_60_0_False_DNA_3.m OK ../data/distance/MinkowskiMetric_13.m OK ../data/distance/SparseEuclidianDistance_fnord.m OK ../data/distance/TanimotoDistance_fnord.m OK *** Testing in ../data/distribution/*.m ../data/distribution/HMM_4_60_6_3_0_1en10_False_CUBE_1.m OK ../data/distribution/Histogram_False_60_0_DNA_3.m OK ../data/distribution/LinearHMM_False_60_0_DNA_3.m OK *** Testing in ../data/kernel/*.m ../data/kernel/AUC_15_Gaussian_10.m OK ../data/kernel/Chi2_10_12.m OK ../data/kernel/Combined_3_10_60_LocalAlignmentString_FixedDegreeString_10_True_3_DNA_DNA_60_PolyMatchString_60_10_DNA.m OK ../data/kernel/CommUlongString_60_0_False_False_DNA_3.m OK ../data/kernel/CommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/Const_230.m OK ../data/kernel/Custom_7.m OK ../data/kernel/Diag_230.m OK ../data/kernel/Distance_CanberraMetric_17.m OK ../data/kernel/FixedDegreeString_60_3_DNA.m OK ../data/kernel/GaussianShift_1_2_13.m OK ../data/kernel/Gaussian_13.m OK ../data/kernel/HistogramWordString_60_0_DNA_3_False.m OK ../data/kernel/LinearByte_60_RAWBYTE.m OK ../data/kernel/LinearString_60_DNA.m OK ../data/kernel/LinearWord_fnord.m OK ../data/kernel/Linear_fnord.m OK ../data/kernel/LocalAlignmentString_60_DNA.m OK ../data/kernel/MatchWordString_60_0_False_3_DNA_3.m OK ../data/kernel/PolyMatchString_60_3_False_DNA.m OK ../data/kernel/PolyMatchString_60_3_True_DNA.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_False.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_True.m OK ../data/kernel/Poly_4_6_0_8_3_FK_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_4_6_0_8_3_TOP_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_False_3_False.m OK ../data/kernel/Poly_False_3_True.m OK ../data/kernel/Poly_True_3_False.m OK ../data/kernel/Poly_True_3_True.m OK ../data/kernel/SalzbergWordString_60_0_DNA_3_False.m OK ../data/kernel/Sigmoid_07_10_05.m OK ../data/kernel/Sigmoid_13_10_11.m OK ../data/kernel/SimpleLocalityImprovedString_5_60_7_DNA_5.m OK ../data/kernel/SparseGaussian_13.m OK ../data/kernel/SparseLinear_fnord.m OK ../data/kernel/SparsePoly_3_10_False.m OK ../data/kernel/SparsePoly_3_10_True.m OK ../data/kernel/WeightedCommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/WeightedDegreePositionString_60_1_DNA.m OK ../data/kernel/WeightedDegreePositionString_60_20_DNA.m OK ../data/kernel/WeightedDegreeString_60_1_DNA.m OK ../data/kernel/WeightedDegreeString_60_20_DNA.m OK *** Testing in ../data/preproc/*.m ../data/preproc/LogPlusOne_Gaussian_12.m OK ../data/preproc/NormOne_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_False_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_True_Gaussian_12.m OK ../data/preproc/SortUlongString_60_0_False_DNA_CommUlongString_3_False.m OK ../data/preproc/SortWordString_60_0_False_DNA_CommWordString_3_False.m OK *** Testing in ../data/regression/*.m ../data/regression/KRR_Gaussian_16_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en06_15.m OK ../data/regression/LibSVR_0017_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_023_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_15_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_30_16_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_001.m OK ../data/regression/LibSVR_30_1_15_1en05_Gaussian_001.m OK cd ../examples/octave && ( OCTAVE_LOADPATH="/build/buildd/shogun-0.6.7/debian/shogun-octave/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu:" ./check.sh ) running all_classifier.m .. OK running all_clustering.m .. OK running all_distance.m .. OK running all_distribution.m .. OK running all_kernels.m .. OK running all_preproc.m .. OK running all_regression.m .. OK running liblinear.m .. OK running lik_kernel.m .. OK running lpboost.m .. ERROR running lpm.m .. ERROR running markov_chain.m .. OK running mkl_classify_christmas_star.m .. ERROR running mkl_regression_3sine_waves.m .. ERROR running mkl_regression_sine.m .. ERROR running spec_kernel.m .. ERROR running string_features.m .. OK running svmocas.m .. OK running svmsgd.m .. OK running wd_kernel.m .. ERROR running wds_kernel.m .. ERROR running weighted_spec.m .. OK make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-octave' touch debian/stamp-install-octave dh_installdirs -pshogun-r /usr/bin/make -C build-r install \ DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-r \ RDIR=/usr/lib/R/site-library make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-r' install -d -m755 /build/buildd/shogun-0.6.7/debian/shogun-r/usr/lib/R/site-library/sg/demo install -d -m755 /build/buildd/shogun-0.6.7/debian/shogun-r/usr/lib/R/site-library/sg/libs install -d -m755 /build/buildd/shogun-0.6.7/debian/shogun-r/usr/lib/R/site-library/sg/Meta install -d -m755 /build/buildd/shogun-0.6.7/debian/shogun-r/usr/lib/R/site-library/sg/R install -m755 sg.so /build/buildd/shogun-0.6.7/debian/shogun-r/usr/lib/R/site-library/sg/libs install -m644 ../examples/r/*.R ../examples/r/graphical/*.R /build/buildd/shogun-0.6.7/debian/shogun-r/usr/lib/R/site-library/sg/demo ./.r-install.sh /build/buildd/shogun-0.6.7/debian/shogun-r/usr/lib/R/site-library sg R version 2.8.1 RC (2008-12-19 r47259) Copyright (C) 2008 The R Foundation for Statistical Computing ISBN 3-900051-07-0 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x=structure(list(DESCRIPTION = c(Package='sg', Version="0.6.7", Date="2008-12-23 15:32:57", Title="The SHOGUN Machine Learning Toolbox", Author="Soeren Sonnenburg, Gunnar Raetsch", Maintainer="Soeren.Sonnenburg@first.fraunhofer.de", Depends="R (>= 2.8.1)"), Built = list(R="2.8.1", Platform="powerpc-unknown-linux-gnu", Date="2008-12-23 15:32:57", OStype="unix"), Rdepends = list(name='R', op='>=', version='2.1.0'), Rdepends2 = list(list(name='R', op='>=', version='2.1.0')), Depends = list(), Suggests = list(), Imports = list()), class = 'packageDescription2'); .saveRDS(x, "/build/buildd/shogun-0.6.7/debian/shogun-r/usr/lib/R/site-library/sg/Meta/package.rds") > Installing static sg interface for R make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-r' /usr/bin/make -C build-r tests \ DESTDIR=/build/buildd/shogun-0.6.7/debian/shogun-r \ RDIR=/usr/lib/R/site-library; make[1]: Entering directory `/build/buildd/shogun-0.6.7/build-r' cd ../testsuite/r && ( R_LIBS="/build/buildd/shogun-0.6.7/debian/shogun-r/usr/lib/R/site-library" ./test_all.sh ) *** Testing in ../data/classifier/*.m ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GMNPSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GMNPSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_0001_1en05_Linear_30_16.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_0017_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_023_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_15_1.m OK ../data/classifier/GPBTSVM_001_1en05_Linear_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/GPBTSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_16_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_16_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_16_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_16_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_0001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommUlongString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_0017_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_023_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_15_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_0_CommWordString_False_30_1_False_DNA_3.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_0017_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_023_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_15_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_20_DNA_WeightedDegreePositionString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_True_30_1_3_DNA_WeightedDegreeString_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_0017_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_023_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_15_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreePositionString_30_1_20_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_0017_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_023_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_15_1_3_DNA_True.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA.m OK ../data/classifier/GPBTSVM_60_001_1en05_WeightedDegreeString_30_1_3_DNA_True.m OK ../data/classifier/KNN_EuclidianDistance_1_3.m OK ../data/classifier/LDA_1_01.m OK ../data/classifier/LibLinear_0017_1_1en05_True.m OK ../data/classifier/LibLinear_023_1_1en05_True.m OK ../data/classifier/LibLinear_15_1_1en05_True.m OK ../data/classifier/LibLinear_30_16_1en05_True.m OK ../data/classifier/LibLinear_30_1_1en05_True.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMMultiClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMMultiClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVMOneClass_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVMOneClass_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/LibSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/LibSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_1.m OK ../data/classifier/MPDSVM_15_0001_1en05_Gaussian_30_16.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_0017_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_023_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_15_1.m OK ../data/classifier/MPDSVM_15_001_1en05_Gaussian_30_1.m OK ../data/classifier/Perceptron_01_1_1000.m OK ../data/classifier/SVMLin_0017_1_1en05_True.m OK ../data/classifier/SVMLin_023_1_1en05_True.m OK ../data/classifier/SVMLin_15_1_1en05_True.m OK ../data/classifier/SVMLin_30_16_1en05_True.m OK ../data/classifier/SVMLin_30_1_1en05_True.m OK ../data/classifier/SVMOcas_0017_1_1en05_False.m OK ../data/classifier/SVMOcas_023_1_1en05_False.m OK ../data/classifier/SVMOcas_15_1_1en05_False.m OK ../data/classifier/SVMOcas_30_16_1en05_False.m OK ../data/classifier/SVMOcas_30_1_1en05_False.m OK ../data/classifier/SVMSGD_0017_1_1en05_True.m OK ../data/classifier/SVMSGD_023_1_1en05_True.m OK ../data/classifier/SVMSGD_15_1_1en05_True.m OK ../data/classifier/SVMSGD_30_16_1en05_True.m OK ../data/classifier/SVMSGD_30_1_1en05_True.m OK ../data/classifier/SubGradientSVM_05_0017_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_023_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_15_1_1en05_False.m OK ../data/classifier/SubGradientSVM_05_30_16_1en05_False.m OK ../data/classifier/SubGradientSVM_05_30_1_1en05_False.m OK *** Testing in ../data/clustering/*.m ../data/clustering/Hierarchical_EuclidianDistance_3.m OK ../data/clustering/KMeans_EuclidianDistance_3.m OK *** Testing in ../data/distance/*.m ../data/distance/BrayCurtisDistance_fnord.m OK ../data/distance/CanberraMetric_fnord.m OK ../data/distance/CanberraWordDistance_60_0_False_DNA_3.m OK ../data/distance/ChebyshewMetric_fnord.m OK ../data/distance/ChiSquareDistance_fnord.m OK ../data/distance/CosineDistance_fnord.m OK ../data/distance/EuclidianDistance_fnord.m OK ../data/distance/GeodesicMetric_fnord.m OK ../data/distance/HammingWordDistance_60_0_False_False_DNA_3.m OK ../data/distance/HammingWordDistance_60_0_False_True_DNA_3.m OK ../data/distance/JensenMetric_fnord.m OK ../data/distance/ManhattanMetric_fnord.m OK ../data/distance/ManhattanWordDistance_60_0_False_DNA_3.m OK ../data/distance/MinkowskiMetric_13.m OK ../data/distance/SparseEuclidianDistance_fnord.m OK ../data/distance/TanimotoDistance_fnord.m OK *** Testing in ../data/distribution/*.m ../data/distribution/HMM_4_60_6_3_0_1en10_False_CUBE_1.m OK ../data/distribution/Histogram_False_60_0_DNA_3.m OK ../data/distribution/LinearHMM_False_60_0_DNA_3.m OK *** Testing in ../data/kernel/*.m ../data/kernel/AUC_15_Gaussian_10.m OK ../data/kernel/Chi2_10_12.m OK ../data/kernel/Combined_3_10_60_LocalAlignmentString_FixedDegreeString_10_True_3_DNA_DNA_60_PolyMatchString_60_10_DNA.m OK ../data/kernel/CommUlongString_60_0_False_False_DNA_3.m OK ../data/kernel/CommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/Const_230.m OK ../data/kernel/Custom_7.m OK ../data/kernel/Diag_230.m OK ../data/kernel/Distance_CanberraMetric_17.m OK ../data/kernel/FixedDegreeString_60_3_DNA.m OK ../data/kernel/GaussianShift_1_2_13.m OK ../data/kernel/Gaussian_13.m OK ../data/kernel/HistogramWordString_60_0_DNA_3_False.m OK ../data/kernel/LinearByte_60_RAWBYTE.m OK ../data/kernel/LinearString_60_DNA.m OK ../data/kernel/LinearWord_fnord.m OK ../data/kernel/Linear_fnord.m OK ../data/kernel/LocalAlignmentString_60_DNA.m OK ../data/kernel/MatchWordString_60_0_False_3_DNA_3.m OK ../data/kernel/PolyMatchString_60_3_False_DNA.m OK ../data/kernel/PolyMatchString_60_3_True_DNA.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_False.m OK ../data/kernel/PolyMatchWordString_60_0_False_3_DNA_3_True.m OK ../data/kernel/Poly_4_6_0_8_3_FK_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_4_6_0_8_3_TOP_False_True_01_1_CUBE_1_False.m OK ../data/kernel/Poly_False_3_False.m OK ../data/kernel/Poly_False_3_True.m OK ../data/kernel/Poly_True_3_False.m OK ../data/kernel/Poly_True_3_True.m OK ../data/kernel/SalzbergWordString_60_0_DNA_3_False.m OK ../data/kernel/Sigmoid_07_10_05.m OK ../data/kernel/Sigmoid_13_10_11.m OK ../data/kernel/SimpleLocalityImprovedString_5_60_7_DNA_5.m OK ../data/kernel/SparseGaussian_13.m OK ../data/kernel/SparseLinear_fnord.m OK ../data/kernel/SparsePoly_3_10_False.m OK ../data/kernel/SparsePoly_3_10_True.m OK ../data/kernel/WeightedCommWordString_60_0_False_False_DNA_3.m OK ../data/kernel/WeightedDegreePositionString_60_1_DNA.m OK ../data/kernel/WeightedDegreePositionString_60_20_DNA.m OK ../data/kernel/WeightedDegreeString_60_1_DNA.m OK ../data/kernel/WeightedDegreeString_60_20_DNA.m OK *** Testing in ../data/preproc/*.m ../data/preproc/LogPlusOne_Gaussian_12.m OK ../data/preproc/NormOne_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_False_Gaussian_12.m OK ../data/preproc/PruneVarSubMean_True_Gaussian_12.m OK ../data/preproc/SortUlongString_60_0_False_DNA_CommUlongString_3_False.m OK ../data/preproc/SortWordString_60_0_False_DNA_CommWordString_3_False.m OK *** Testing in ../data/regression/*.m ../data/regression/KRR_Gaussian_16_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en05_15.m OK ../data/regression/KRR_Gaussian_1_1en06_15.m OK ../data/regression/LibSVR_0017_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_023_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_15_1_15_1en05_Gaussian_001.m OK ../data/regression/LibSVR_30_16_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_0001.m OK ../data/regression/LibSVR_30_1_15_00001_Gaussian_001.m OK ../data/regression/LibSVR_30_1_15_1en05_Gaussian_001.m OK cd ../examples/r && ( R_LIBS="/build/buildd/shogun-0.6.7/debian/shogun-r/usr/lib/R/site-library" ./check.sh ) running all_classifier.R .. OK running all_clustering.R .. OK running all_distance.R .. OK running all_distribution.R .. OK running all_kernels.R .. OK running all_preproc.R .. OK running all_regression.R .. OK running mkl_classify_christmas_star.R .. ERROR running mkl_regression_3sine_waves.R .. ERROR running mkl_regression_sine.R .. ERROR running string_kernel.R .. ERROR running wd_mkl.R .. ERROR make[1]: Leaving directory `/build/buildd/shogun-0.6.7/build-r' touch debian/stamp-install-r dh_installdocs -pshogun-dbg ./README dh_installexamples -pshogun-dbg dh_installman -pshogun-dbg dh_installinfo -pshogun-dbg dh_installmenu -pshogun-dbg dh_installcron -pshogun-dbg dh_installinit -pshogun-dbg dh_installdebconf -pshogun-dbg dh_installemacsen -pshogun-dbg dh_installcatalogs -pshogun-dbg dh_installpam -pshogun-dbg dh_installlogrotate -pshogun-dbg dh_installlogcheck -pshogun-dbg dh_installchangelogs -pshogun-dbg dh_installudev -pshogun-dbg dh_lintian -pshogun-dbg dh_install -pshogun-dbg dh_link -pshogun-dbg dh_installmime -pshogun-dbg dh_installdocs -pshogun-python-modular ./README dh_installexamples -pshogun-python-modular dh_installman -pshogun-python-modular dh_installinfo -pshogun-python-modular dh_installmenu -pshogun-python-modular dh_installcron -pshogun-python-modular dh_installinit -pshogun-python-modular dh_installdebconf -pshogun-python-modular dh_installemacsen -pshogun-python-modular dh_installcatalogs -pshogun-python-modular dh_installpam -pshogun-python-modular dh_installlogrotate -pshogun-python-modular dh_installlogcheck -pshogun-python-modular dh_installchangelogs -pshogun-python-modular dh_installudev -pshogun-python-modular dh_lintian -pshogun-python-modular dh_install -pshogun-python-modular dh_link -pshogun-python-modular dh_installmime -pshogun-python-modular dh_installdocs -pshogun-python ./README dh_installexamples -pshogun-python dh_installman -pshogun-python dh_installinfo -pshogun-python dh_installmenu -pshogun-python dh_installcron -pshogun-python dh_installinit -pshogun-python dh_installdebconf -pshogun-python dh_installemacsen -pshogun-python dh_installcatalogs -pshogun-python dh_installpam -pshogun-python dh_installlogrotate -pshogun-python dh_installlogcheck -pshogun-python dh_installchangelogs -pshogun-python dh_installudev -pshogun-python dh_lintian -pshogun-python dh_install -pshogun-python dh_link -pshogun-python dh_installmime -pshogun-python dh_installdocs -pshogun-readline ./README dh_installexamples -pshogun-readline dh_installman -pshogun-readline dh_installinfo -pshogun-readline dh_installmenu -pshogun-readline dh_installcron -pshogun-readline dh_installinit -pshogun-readline dh_installdebconf -pshogun-readline dh_installemacsen -pshogun-readline dh_installcatalogs -pshogun-readline dh_installpam -pshogun-readline dh_installlogrotate -pshogun-readline dh_installlogcheck -pshogun-readline dh_installchangelogs -pshogun-readline dh_installudev -pshogun-readline dh_lintian -pshogun-readline dh_install -pshogun-readline dh_link -pshogun-readline dh_installmime -pshogun-readline dh_installdocs -pshogun-octave-modular ./README dh_installexamples -pshogun-octave-modular dh_installman -pshogun-octave-modular dh_installinfo -pshogun-octave-modular dh_installmenu -pshogun-octave-modular dh_installcron -pshogun-octave-modular dh_installinit -pshogun-octave-modular dh_installdebconf -pshogun-octave-modular dh_installemacsen -pshogun-octave-modular dh_installcatalogs -pshogun-octave-modular dh_installpam -pshogun-octave-modular dh_installlogrotate -pshogun-octave-modular dh_installlogcheck -pshogun-octave-modular dh_installchangelogs -pshogun-octave-modular dh_installudev -pshogun-octave-modular dh_lintian -pshogun-octave-modular dh_install -pshogun-octave-modular dh_link -pshogun-octave-modular dh_installmime -pshogun-octave-modular dh_installdocs -pshogun-octave ./README dh_installexamples -pshogun-octave dh_installman -pshogun-octave dh_installinfo -pshogun-octave dh_installmenu -pshogun-octave dh_installcron -pshogun-octave dh_installinit -pshogun-octave dh_installdebconf -pshogun-octave dh_installemacsen -pshogun-octave dh_installcatalogs -pshogun-octave dh_installpam -pshogun-octave dh_installlogrotate -pshogun-octave dh_installlogcheck -pshogun-octave dh_installchangelogs -pshogun-octave dh_installudev -pshogun-octave dh_lintian -pshogun-octave dh_install -pshogun-octave dh_link -pshogun-octave dh_installmime -pshogun-octave dh_installdocs -pshogun-r ./README dh_installexamples -pshogun-r dh_installman -pshogun-r dh_installinfo -pshogun-r dh_installmenu -pshogun-r dh_installcron -pshogun-r dh_installinit -pshogun-r dh_installdebconf -pshogun-r dh_installemacsen -pshogun-r dh_installcatalogs -pshogun-r dh_installpam -pshogun-r dh_installlogrotate -pshogun-r dh_installlogcheck -pshogun-r dh_installchangelogs -pshogun-r dh_installudev -pshogun-r dh_lintian -pshogun-r dh_install -pshogun-r dh_link -pshogun-r dh_installmime -pshogun-r dh_compress -pshogun-dbg -X .py -X .html -X .R -X .m dh_fixperms -pshogun-dbg dh_strip -pshogun-python-modular --dbg-package=shogun-dbg dh_strip debug symbol extraction: all non-arch-all packages for this build platform powerpc: shogun-dbg shogun-python-modular shogun-python shogun-readline shogun-octave-modular shogun-octave shogun-r dh_strip debug symbol extraction: not adding gnu debuglinks since --dbg-package is given dh_strip debug symbol extraction: packages to act on: shogun-python-modular dh_strip debug symbol extraction: ignored packages: dpkg-gencontrol: warning: unknown substitution variable ${python:Versions} pkgstriptranslations: processing control file: ./debian/shogun-python-modular-dbgsym/DEBIAN/control, package shogun-python-modular-dbgsym, directory ./debian/shogun-python-modular-dbgsym pkgstriptranslations: shogun-python-modular-dbgsym does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `/build/buildd/shogun-0.6.7/debian/shogun-python-modular-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `shogun-python-modular-dbgsym' in `../shogun-python-modular-dbgsym_0.6.7-1ubuntu1_powerpc.ddeb'. dh_compress -pshogun-python-modular -X .py -X .html -X .R -X .m dh_fixperms -pshogun-python-modular dh_makeshlibs -pshogun-python-modular dh_strip -pshogun-python --dbg-package=shogun-dbg dh_strip debug symbol extraction: all non-arch-all packages for this build platform powerpc: shogun-dbg shogun-python-modular shogun-python shogun-readline shogun-octave-modular shogun-octave shogun-r dh_strip debug symbol extraction: not adding gnu debuglinks since --dbg-package is given dh_strip debug symbol extraction: packages to act on: shogun-python dh_strip debug symbol extraction: ignored packages: dpkg-gencontrol: warning: unknown substitution variable ${python:Versions} pkgstriptranslations: processing control file: ./debian/shogun-python-dbgsym/DEBIAN/control, package shogun-python-dbgsym, directory ./debian/shogun-python-dbgsym pkgstriptranslations: shogun-python-dbgsym does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `/build/buildd/shogun-0.6.7/debian/shogun-python-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `shogun-python-dbgsym' in `../shogun-python-dbgsym_0.6.7-1ubuntu1_powerpc.ddeb'. dh_compress -pshogun-python -X .py -X .html -X .R -X .m dh_fixperms -pshogun-python dh_makeshlibs -pshogun-python dh_strip -pshogun-readline --dbg-package=shogun-dbg dh_strip debug symbol extraction: all non-arch-all packages for this build platform powerpc: shogun-dbg shogun-python-modular shogun-python shogun-readline shogun-octave-modular shogun-octave shogun-r dh_strip debug symbol extraction: not adding gnu debuglinks since --dbg-package is given dh_strip debug symbol extraction: packages to act on: shogun-readline dh_strip debug symbol extraction: ignored packages: pkgstriptranslations: processing control file: ./debian/shogun-readline-dbgsym/DEBIAN/control, package shogun-readline-dbgsym, directory ./debian/shogun-readline-dbgsym pkgstriptranslations: shogun-readline-dbgsym does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `/build/buildd/shogun-0.6.7/debian/shogun-readline-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `shogun-readline-dbgsym' in `../shogun-readline-dbgsym_0.6.7-1ubuntu1_powerpc.ddeb'. dh_compress -pshogun-readline -X .py -X .html -X .R -X .m dh_fixperms -pshogun-readline dh_makeshlibs -pshogun-readline dh_strip -pshogun-octave-modular --dbg-package=shogun-dbg dh_strip debug symbol extraction: all non-arch-all packages for this build platform powerpc: shogun-dbg shogun-python-modular shogun-python shogun-readline shogun-octave-modular shogun-octave shogun-r dh_strip debug symbol extraction: not adding gnu debuglinks since --dbg-package is given dh_strip debug symbol extraction: packages to act on: shogun-octave-modular dh_strip debug symbol extraction: ignored packages: pkgstriptranslations: processing control file: ./debian/shogun-octave-modular-dbgsym/DEBIAN/control, package shogun-octave-modular-dbgsym, directory ./debian/shogun-octave-modular-dbgsym pkgstriptranslations: shogun-octave-modular-dbgsym does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `/build/buildd/shogun-0.6.7/debian/shogun-octave-modular-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `shogun-octave-modular-dbgsym' in `../shogun-octave-modular-dbgsym_0.6.7-1ubuntu1_powerpc.ddeb'. dh_compress -pshogun-octave-modular -X .py -X .html -X .R -X .m dh_fixperms -pshogun-octave-modular dh_makeshlibs -pshogun-octave-modular dh_strip -pshogun-octave --dbg-package=shogun-dbg dh_strip debug symbol extraction: all non-arch-all packages for this build platform powerpc: shogun-dbg shogun-python-modular shogun-python shogun-readline shogun-octave-modular shogun-octave shogun-r dh_strip debug symbol extraction: not adding gnu debuglinks since --dbg-package is given dh_strip debug symbol extraction: packages to act on: shogun-octave dh_strip debug symbol extraction: ignored packages: pkgstriptranslations: processing control file: ./debian/shogun-octave-dbgsym/DEBIAN/control, package shogun-octave-dbgsym, directory ./debian/shogun-octave-dbgsym pkgstriptranslations: shogun-octave-dbgsym does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `/build/buildd/shogun-0.6.7/debian/shogun-octave-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `shogun-octave-dbgsym' in `../shogun-octave-dbgsym_0.6.7-1ubuntu1_powerpc.ddeb'. dh_compress -pshogun-octave -X .py -X .html -X .R -X .m dh_fixperms -pshogun-octave dh_makeshlibs -pshogun-octave dh_strip -pshogun-r --dbg-package=shogun-dbg dh_strip debug symbol extraction: all non-arch-all packages for this build platform powerpc: shogun-dbg shogun-python-modular shogun-python shogun-readline shogun-octave-modular shogun-octave shogun-r dh_strip debug symbol extraction: not adding gnu debuglinks since --dbg-package is given dh_strip debug symbol extraction: packages to act on: shogun-r dh_strip debug symbol extraction: ignored packages: pkgstriptranslations: processing control file: ./debian/shogun-r-dbgsym/DEBIAN/control, package shogun-r-dbgsym, directory ./debian/shogun-r-dbgsym pkgstriptranslations: shogun-r-dbgsym does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `/build/buildd/shogun-0.6.7/debian/shogun-r-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `shogun-r-dbgsym' in `../shogun-r-dbgsym_0.6.7-1ubuntu1_powerpc.ddeb'. dh_compress -pshogun-r -X .py -X .html -X .R -X .m dh_fixperms -pshogun-r dh_makeshlibs -pshogun-r dh_installdeb -pshogun-dbg dh_perl -pshogun-dbg dh_shlibdeps -pshogun-dbg -l :/usr/lib/octave-3.0.1:/usr/lib/atlas dh_installdeb -pshogun-python-modular dh_perl -pshogun-python-modular dh_shlibdeps -pshogun-python-modular -l :/usr/lib/octave-3.0.1:/usr/lib/atlas dpkg-shlibdeps: warning: dependency on liblapack_atlas.so.3gf could be avoided if "debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/_Features.so debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/_Kernel.so debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/_PreProc.so debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/_PreProc.so debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/_Kernel.so debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/_Library.so debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/_Distribution.so debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/_Evaluation.so debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/_Classifier.so debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/_Evaluation.so debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/_Clustering.so debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/_Distribution.so debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/_Structure.so debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/_Library.so debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/_Features.so debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/_Distance.so debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/_Regression.so debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/_Classifier.so debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/_Structure.so debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/_Regression.so debian/shogun-python-modular/usr/lib/python2.5/site-packages/shogun/_Distance.so debian/shogun-python-modular/usr/lib/python2.4/site-packages/shogun/_Clustering.so" were not uselessly linked against it (they use none of its symbols). Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. dh_installdeb -pshogun-python dh_perl -pshogun-python dh_shlibdeps -pshogun-python -l :/usr/lib/octave-3.0.1:/usr/lib/atlas dpkg-shlibdeps: warning: dependency on liblapack_atlas.so.3gf could be avoided if "debian/shogun-python/usr/lib/python2.4/site-packages/sg.so debian/shogun-python/usr/lib/python2.5/site-packages/sg.so" were not uselessly linked against it (they use none of its symbols). Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. dh_installdeb -pshogun-readline dh_perl -pshogun-readline dh_shlibdeps -pshogun-readline -l :/usr/lib/octave-3.0.1:/usr/lib/atlas dpkg-shlibdeps: warning: dependency on liblapack_atlas.so.3gf could be avoided if "debian/shogun-readline/usr/bin/shogun" were not uselessly linked against it (they use none of its symbols). Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. dh_installdeb -pshogun-octave-modular dh_perl -pshogun-octave-modular dh_shlibdeps -pshogun-octave-modular -l :/usr/lib/octave-3.0.1:/usr/lib/atlas dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: dependency on liblapack_atlas.so.3gf could be avoided if "debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Regression.oct debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Clustering.oct debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Features.oct debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Evaluation.oct debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distribution.oct debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Distance.oct debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/PreProc.oct debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Classifier.oct debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Library.oct debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Structure.oct debian/shogun-octave-modular/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/shogun/Kernel.oct" were not uselessly linked against it (they use none of its symbols). Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. dh_installdeb -pshogun-octave dh_perl -pshogun-octave dh_shlibdeps -pshogun-octave -l :/usr/lib/octave-3.0.1:/usr/lib/atlas dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctinterp.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `libcruft.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: Can't extract name and version from library name `liboctave.so' dpkg-shlibdeps: warning: dependency on liblapack_atlas.so.3gf could be avoided if "debian/shogun-octave/usr/lib/octave/site/oct/api-v32/powerpc-unknown-linux-gnu/sg.oct" were not uselessly linked against it (they use none of its symbols). Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. dh_installdeb -pshogun-r dh_perl -pshogun-r dh_shlibdeps -pshogun-r -l :/usr/lib/octave-3.0.1:/usr/lib/atlas dpkg-shlibdeps: warning: dependency on liblapack_atlas.so.3gf could be avoided if "debian/shogun-r/usr/lib/R/site-library/sg/libs/sg.so" were not uselessly linked against it (they use none of its symbols). Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. Use of uninitialized value in string comparison (cmp) at /usr/share/perl5/Dpkg/Deps.pm line 366. dh_gencontrol -pshogun-dbg # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/shogun-dbg/usr/share/doc ] || \ [ ! -d debian/shogun-dbg/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/shogun-dbg/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/shogun-dbg/usr/share/doc/shogun-dbg; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/shogun-dbg/usr/share/doc/shogun-dbg/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in shogun-dbg to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/shogun-dbg/usr/share/gnome/help ]; then \ cd debian/shogun-dbg && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p shogun-dbg dh_md5sums -pshogun-dbg dh_builddeb -pshogun-dbg pkgstriptranslations: processing control file: ./debian/shogun-dbg/DEBIAN/control, package shogun-dbg, directory ./debian/shogun-dbg pkgstriptranslations: shogun-dbg does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `debian/shogun-dbg/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `shogun-dbg' in `../shogun-dbg_0.6.7-1ubuntu1_powerpc.deb'. dh_gencontrol -pshogun-python-modular dpkg-gencontrol: warning: unknown substitution variable ${python:Provides} dpkg-gencontrol: warning: unknown substitution variable ${misc:Depends} dpkg-gencontrol: warning: unknown substitution variable ${python:Provides} # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/shogun-python-modular/usr/share/doc ] || \ [ ! -d debian/shogun-python-modular/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/shogun-python-modular/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/shogun-python-modular/usr/share/doc/shogun-python-modular; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/shogun-python-modular/usr/share/doc/shogun-python-modular/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in shogun-python-modular to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/shogun-python-modular/usr/share/gnome/help ]; then \ cd debian/shogun-python-modular && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p shogun-python-modular dh_md5sums -pshogun-python-modular dh_builddeb -pshogun-python-modular pkgstriptranslations: processing control file: ./debian/shogun-dbg/DEBIAN/control, package shogun-dbg, directory ./debian/shogun-dbg pkgstriptranslations: shogun-dbg does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-python-modular/DEBIAN/control, package shogun-python-modular, directory ./debian/shogun-python-modular pkgstriptranslations: shogun-python-modular does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `debian/shogun-python-modular/DEBIAN/control' contains user-defined field `Original-Maintainer' warning, `debian/shogun-python-modular/DEBIAN/control' contains user-defined field `Python-Version' dpkg-deb: ignoring 2 warnings about the control file(s) dpkg-deb: building package `shogun-python-modular' in `../shogun-python-modular_0.6.7-1ubuntu1_powerpc.deb'. dh_gencontrol -pshogun-python dpkg-gencontrol: warning: unknown substitution variable ${python:Provides} dpkg-gencontrol: warning: unknown substitution variable ${misc:Depends} dpkg-gencontrol: warning: unknown substitution variable ${python:Provides} # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/shogun-python/usr/share/doc ] || \ [ ! -d debian/shogun-python/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/shogun-python/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/shogun-python/usr/share/doc/shogun-python; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/shogun-python/usr/share/doc/shogun-python/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in shogun-python to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/shogun-python/usr/share/gnome/help ]; then \ cd debian/shogun-python && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p shogun-python dh_md5sums -pshogun-python dh_builddeb -pshogun-python pkgstriptranslations: processing control file: ./debian/shogun-dbg/DEBIAN/control, package shogun-dbg, directory ./debian/shogun-dbg pkgstriptranslations: shogun-dbg does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-python-modular/DEBIAN/control, package shogun-python-modular, directory ./debian/shogun-python-modular pkgstriptranslations: shogun-python-modular does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-python/DEBIAN/control, package shogun-python, directory ./debian/shogun-python pkgstriptranslations: shogun-python does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `debian/shogun-python/DEBIAN/control' contains user-defined field `Original-Maintainer' warning, `debian/shogun-python/DEBIAN/control' contains user-defined field `Python-Version' dpkg-deb: ignoring 2 warnings about the control file(s) dpkg-deb: building package `shogun-python' in `../shogun-python_0.6.7-1ubuntu1_powerpc.deb'. dh_gencontrol -pshogun-readline dpkg-gencontrol: warning: unknown substitution variable ${misc:Depends} # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/shogun-readline/usr/share/doc ] || \ [ ! -d debian/shogun-readline/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/shogun-readline/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/shogun-readline/usr/share/doc/shogun-readline; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/shogun-readline/usr/share/doc/shogun-readline/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in shogun-readline to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/shogun-readline/usr/share/gnome/help ]; then \ cd debian/shogun-readline && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p shogun-readline dh_md5sums -pshogun-readline dh_builddeb -pshogun-readline pkgstriptranslations: processing control file: ./debian/shogun-dbg/DEBIAN/control, package shogun-dbg, directory ./debian/shogun-dbg pkgstriptranslations: shogun-dbg does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-python-modular/DEBIAN/control, package shogun-python-modular, directory ./debian/shogun-python-modular pkgstriptranslations: shogun-python-modular does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-python/DEBIAN/control, package shogun-python, directory ./debian/shogun-python pkgstriptranslations: shogun-python does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-readline/DEBIAN/control, package shogun-readline, directory ./debian/shogun-readline pkgstriptranslations: shogun-readline does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `debian/shogun-readline/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `shogun-readline' in `../shogun-readline_0.6.7-1ubuntu1_powerpc.deb'. dh_gencontrol -pshogun-octave-modular dpkg-gencontrol: warning: unknown substitution variable ${misc:Depends} # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/shogun-octave-modular/usr/share/doc ] || \ [ ! -d debian/shogun-octave-modular/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/shogun-octave-modular/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/shogun-octave-modular/usr/share/doc/shogun-octave-modular; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/shogun-octave-modular/usr/share/doc/shogun-octave-modular/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in shogun-octave-modular to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/shogun-octave-modular/usr/share/gnome/help ]; then \ cd debian/shogun-octave-modular && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p shogun-octave-modular dh_md5sums -pshogun-octave-modular dh_builddeb -pshogun-octave-modular pkgstriptranslations: processing control file: ./debian/shogun-dbg/DEBIAN/control, package shogun-dbg, directory ./debian/shogun-dbg pkgstriptranslations: shogun-dbg does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-python-modular/DEBIAN/control, package shogun-python-modular, directory ./debian/shogun-python-modular pkgstriptranslations: shogun-python-modular does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-python/DEBIAN/control, package shogun-python, directory ./debian/shogun-python pkgstriptranslations: shogun-python does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-readline/DEBIAN/control, package shogun-readline, directory ./debian/shogun-readline pkgstriptranslations: shogun-readline does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-octave-modular/DEBIAN/control, package shogun-octave-modular, directory ./debian/shogun-octave-modular pkgstriptranslations: shogun-octave-modular does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `debian/shogun-octave-modular/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `shogun-octave-modular' in `../shogun-octave-modular_0.6.7-1ubuntu1_powerpc.deb'. dh_gencontrol -pshogun-octave dpkg-gencontrol: warning: unknown substitution variable ${misc:Depends} # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/shogun-octave/usr/share/doc ] || \ [ ! -d debian/shogun-octave/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/shogun-octave/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/shogun-octave/usr/share/doc/shogun-octave; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/shogun-octave/usr/share/doc/shogun-octave/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in shogun-octave to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/shogun-octave/usr/share/gnome/help ]; then \ cd debian/shogun-octave && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p shogun-octave dh_md5sums -pshogun-octave dh_builddeb -pshogun-octave pkgstriptranslations: processing control file: ./debian/shogun-dbg/DEBIAN/control, package shogun-dbg, directory ./debian/shogun-dbg pkgstriptranslations: shogun-dbg does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-python-modular/DEBIAN/control, package shogun-python-modular, directory ./debian/shogun-python-modular pkgstriptranslations: shogun-python-modular does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-python/DEBIAN/control, package shogun-python, directory ./debian/shogun-python pkgstriptranslations: shogun-python does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-readline/DEBIAN/control, package shogun-readline, directory ./debian/shogun-readline pkgstriptranslations: shogun-readline does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-octave-modular/DEBIAN/control, package shogun-octave-modular, directory ./debian/shogun-octave-modular pkgstriptranslations: shogun-octave-modular does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-octave/DEBIAN/control, package shogun-octave, directory ./debian/shogun-octave pkgstriptranslations: shogun-octave does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `debian/shogun-octave/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `shogun-octave' in `../shogun-octave_0.6.7-1ubuntu1_powerpc.deb'. dh_gencontrol -pshogun-r dpkg-gencontrol: warning: unknown substitution variable ${misc:Depends} # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/shogun-r/usr/share/doc ] || \ [ ! -d debian/shogun-r/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/shogun-r/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/shogun-r/usr/share/doc/shogun-r; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/shogun-r/usr/share/doc/shogun-r/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in shogun-r to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/shogun-r/usr/share/gnome/help ]; then \ cd debian/shogun-r && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p shogun-r dh_md5sums -pshogun-r dh_builddeb -pshogun-r pkgstriptranslations: processing control file: ./debian/shogun-r/DEBIAN/control, package shogun-r, directory ./debian/shogun-r pkgstriptranslations: shogun-r does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-dbg/DEBIAN/control, package shogun-dbg, directory ./debian/shogun-dbg pkgstriptranslations: shogun-dbg does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-python-modular/DEBIAN/control, package shogun-python-modular, directory ./debian/shogun-python-modular pkgstriptranslations: shogun-python-modular does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-python/DEBIAN/control, package shogun-python, directory ./debian/shogun-python pkgstriptranslations: shogun-python does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-readline/DEBIAN/control, package shogun-readline, directory ./debian/shogun-readline pkgstriptranslations: shogun-readline does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-octave-modular/DEBIAN/control, package shogun-octave-modular, directory ./debian/shogun-octave-modular pkgstriptranslations: shogun-octave-modular does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/shogun-octave/DEBIAN/control, package shogun-octave, directory ./debian/shogun-octave pkgstriptranslations: shogun-octave does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com warning, `debian/shogun-r/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `shogun-r' in `../shogun-r_0.6.7-1ubuntu1_powerpc.deb'. dpkg-genchanges -B -mUbuntu/powerpc Build Daemon >../shogun_0.6.7-1ubuntu1_powerpc.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20081223-1540 Publishing debug debs. chroot-autobuild/build/buildd/shogun-dbg_0.6.7-1ubuntu1_powerpc.deb: new debian package, version 2.0. size 32774148 bytes: control archive= 2394 bytes. 1634 bytes, 30 lines control 4333 bytes, 42 lines md5sums Package: shogun-dbg Source: shogun Version: 0.6.7-1ubuntu1 Architecture: powerpc Maintainer: Ubuntu MOTU Developers Installed-Size: 92020 Section: science Priority: extra Homepage: http://www.shogun-toolbox.org Description: Large Scale Machine Learning Toolbox SHOGUN - is a new machine learning toolbox with focus on large scale kernel methods and especially on Support Vector Machines (SVM) with focus to bioinformatics. It provides a generic SVM object interfacing to several different SVM implementations. Each of the SVMs can be combined with a variety of the many kernels implemented. It can deal with weighted linear combination of a number of sub-kernels, each of which not necessarily working on the same domain, where an optimal sub-kernel weighting can be learned using Multiple Kernel Learning. Apart from SVM 2-class classification and regression problems, a number of linear methods like Linear Discriminant Analysis (LDA), Linear Programming Machine (LPM), (Kernel) Perceptrons and also algorithms to train hidden markov models are implemented. The input feature-objects can be dense, sparse or strings and of type int/short/double/char and can be converted into different feature types. Chains of preprocessors (e.g. substracting the mean) can be attached to each feature object allowing for on-the-fly pre-processing. . SHOGUN comes in different flavours, a stand-a-lone version and also with interfaces to Matlab(tm), R, Octave, Readline and Python. This package contains debug symbols for all interfaces. Original-Maintainer: Soeren Sonnenburg chroot-autobuild/build/buildd/shogun-python-modular_0.6.7-1ubuntu1_powerpc.deb: new debian package, version 2.0. size 5466948 bytes: control archive= 4109 bytes. 1973 bytes, 33 lines control 5560 bytes, 63 lines md5sums 328 bytes, 10 lines * postinst #!/bin/sh 2275 bytes, 54 lines * preinst #!/bin/sh 1247 bytes, 47 lines * prerm #!/bin/sh Package: shogun-python-modular Source: shogun Version: 0.6.7-1ubuntu1 Architecture: powerpc Maintainer: Ubuntu MOTU Developers Installed-Size: 20192 Depends: libatlas3gf-base | liblapack3gf | liblapack.so.3gf, libatlas3gf-base | libatlas.so.3gf, libc6 (>= 2.7), libgcc1 (>= 1:4.2.1), libstdc++6 (>= 4.1.1), python2.4 (>= 2.3.90), python2.5 (>= 2.5), python (<< 2.6), python (>= 2.4), python-central (>= 0.6.7) Recommends: python-numpy, python-matplotlib Section: science Priority: optional Homepage: http://www.shogun-toolbox.org Description: Large Scale Machine Learning Toolbox SHOGUN - is a new machine learning toolbox with focus on large scale kernel methods and especially on Support Vector Machines (SVM) with focus to bioinformatics. It provides a generic SVM object interfacing to several different SVM implementations. Each of the SVMs can be combined with a variety of the many kernels implemented. It can deal with weighted linear combination of a number of sub-kernels, each of which not necessarily working on the same domain, where an optimal sub-kernel weighting can be learned using Multiple Kernel Learning. Apart from SVM 2-class classification and regression problems, a number of linear methods like Linear Discriminant Analysis (LDA), Linear Programming Machine (LPM), (Kernel) Perceptrons and also algorithms to train hidden markov models are implemented. The input feature-objects can be dense, sparse or strings and of type int/short/double/char and can be converted into different feature types. Chains of preprocessors (e.g. substracting the mean) can be attached to each feature object allowing for on-the-fly pre-processing. . SHOGUN comes in different flavours, a stand-a-lone version and also with interfaces to Matlab(tm), R, Octave, Readline and Python. This is the modular Python package employing swig. Original-Maintainer: Soeren Sonnenburg Python-Version: 2.4, 2.5 chroot-autobuild/build/buildd/shogun-python_0.6.7-1ubuntu1_powerpc.deb: new debian package, version 2.0. size 1509228 bytes: control archive= 1919 bytes. 1940 bytes, 33 lines control 1787 bytes, 21 lines md5sums Package: shogun-python Source: shogun Version: 0.6.7-1ubuntu1 Architecture: powerpc Maintainer: Ubuntu MOTU Developers Installed-Size: 4160 Depends: libatlas3gf-base | liblapack3gf | liblapack.so.3gf, libatlas3gf-base | libatlas.so.3gf, libc6 (>= 2.7), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), python2.4 (>= 2.3.90), python2.5 (>= 2.5), python (<< 2.6), python (>= 2.4) Recommends: python-numpy, python-matplotlib Section: science Priority: optional Homepage: http://www.shogun-toolbox.org Description: Large Scale Machine Learning Toolbox SHOGUN - is a new machine learning toolbox with focus on large scale kernel methods and especially on Support Vector Machines (SVM) with focus to bioinformatics. It provides a generic SVM object interfacing to several different SVM implementations. Each of the SVMs can be combined with a variety of the many kernels implemented. It can deal with weighted linear combination of a number of sub-kernels, each of which not necessarily working on the same domain, where an optimal sub-kernel weighting can be learned using Multiple Kernel Learning. Apart from SVM 2-class classification and regression problems, a number of linear methods like Linear Discriminant Analysis (LDA), Linear Programming Machine (LPM), (Kernel) Perceptrons and also algorithms to train hidden markov models are implemented. The input feature-objects can be dense, sparse or strings and of type int/short/double/char and can be converted into different feature types. Chains of preprocessors (e.g. substracting the mean) can be attached to each feature object allowing for on-the-fly pre-processing. . SHOGUN comes in different flavours, a stand-a-lone version and also with interfaces to Matlab(tm), R, Octave, Readline and Python. This is the static Python package without using swig. Original-Maintainer: Soeren Sonnenburg Python-Version: 2.4, 2.5 chroot-autobuild/build/buildd/shogun-readline_0.6.7-1ubuntu1_powerpc.deb: new debian package, version 2.0. size 618638 bytes: control archive= 2053 bytes. 1795 bytes, 31 lines control 2415 bytes, 29 lines md5sums Package: shogun-readline Source: shogun Version: 0.6.7-1ubuntu1 Architecture: powerpc Maintainer: Ubuntu MOTU Developers Installed-Size: 1660 Depends: libatlas3gf-base | liblapack3gf | liblapack.so.3gf, libatlas3gf-base | libatlas.so.3gf, libc6 (>= 2.7), libgcc1 (>= 1:4.1.1), libreadline5 (>= 5.2), libstdc++6 (>= 4.1.1) Section: science Priority: optional Homepage: http://www.shogun-toolbox.org Description: Large Scale Machine Learning Toolbox SHOGUN - is a new machine learning toolbox with focus on large scale kernel methods and especially on Support Vector Machines (SVM) with focus to bioinformatics. It provides a generic SVM object interfacing to several different SVM implementations. Each of the SVMs can be combined with a variety of the many kernels implemented. It can deal with weighted linear combination of a number of sub-kernels, each of which not necessarily working on the same domain, where an optimal sub-kernel weighting can be learned using Multiple Kernel Learning. Apart from SVM 2-class classification and regression problems, a number of linear methods like Linear Discriminant Analysis (LDA), Linear Programming Machine (LPM), (Kernel) Perceptrons and also algorithms to train hidden markov models are implemented. The input feature-objects can be dense, sparse or strings and of type int/short/double/char and can be converted into different feature types. Chains of preprocessors (e.g. substracting the mean) can be attached to each feature object allowing for on-the-fly pre-processing. . SHOGUN comes in different flavours, a stand-a-lone version and also with interfaces to Matlab(tm), R, Octave, Readline and Python. This is the Readline package. Original-Maintainer: Soeren Sonnenburg chroot-autobuild/build/buildd/shogun-octave-modular_0.6.7-1ubuntu1_powerpc.deb: new debian package, version 2.0. size 4144088 bytes: control archive= 2047 bytes. 1822 bytes, 31 lines control 2633 bytes, 26 lines md5sums Package: shogun-octave-modular Source: shogun Version: 0.6.7-1ubuntu1 Architecture: powerpc Maintainer: Ubuntu MOTU Developers Installed-Size: 14164 Depends: libatlas3gf-base | liblapack3gf | liblapack.so.3gf, libatlas3gf-base | libatlas.so.3gf, libc6 (>= 2.7), libgcc1 (>= 1:4.2.1), libstdc++6 (>= 4.2.1), octave3.0 (>= 3.0.1) Section: science Priority: optional Homepage: http://www.shogun-toolbox.org Description: Large Scale Machine Learning Toolbox SHOGUN - is a new machine learning toolbox with focus on large scale kernel methods and especially on Support Vector Machines (SVM) with focus to bioinformatics. It provides a generic SVM object interfacing to several different SVM implementations. Each of the SVMs can be combined with a variety of the many kernels implemented. It can deal with weighted linear combination of a number of sub-kernels, each of which not necessarily working on the same domain, where an optimal sub-kernel weighting can be learned using Multiple Kernel Learning. Apart from SVM 2-class classification and regression problems, a number of linear methods like Linear Discriminant Analysis (LDA), Linear Programming Machine (LPM), (Kernel) Perceptrons and also algorithms to train hidden markov models are implemented. The input feature-objects can be dense, sparse or strings and of type int/short/double/char and can be converted into different feature types. Chains of preprocessors (e.g. substracting the mean) can be attached to each feature object allowing for on-the-fly pre-processing. . SHOGUN comes in different flavours, a stand-a-lone version and also with interfaces to Matlab(tm), R, Octave, Readline and Python. This is the modular Octave package employing swig. Original-Maintainer: Soeren Sonnenburg chroot-autobuild/build/buildd/shogun-octave_0.6.7-1ubuntu1_powerpc.deb: new debian package, version 2.0. size 852782 bytes: control archive= 5740 bytes. 1790 bytes, 31 lines control 15732 bytes, 163 lines md5sums Package: shogun-octave Source: shogun Version: 0.6.7-1ubuntu1 Architecture: powerpc Maintainer: Ubuntu MOTU Developers Installed-Size: 2900 Depends: libatlas3gf-base | liblapack3gf | liblapack.so.3gf, libatlas3gf-base | libatlas.so.3gf, libc6 (>= 2.7), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), octave3.0 (>= 3.0.1) Section: science Priority: optional Homepage: http://www.shogun-toolbox.org Description: Large Scale Machine Learning Toolbox SHOGUN - is a new machine learning toolbox with focus on large scale kernel methods and especially on Support Vector Machines (SVM) with focus to bioinformatics. It provides a generic SVM object interfacing to several different SVM implementations. Each of the SVMs can be combined with a variety of the many kernels implemented. It can deal with weighted linear combination of a number of sub-kernels, each of which not necessarily working on the same domain, where an optimal sub-kernel weighting can be learned using Multiple Kernel Learning. Apart from SVM 2-class classification and regression problems, a number of linear methods like Linear Discriminant Analysis (LDA), Linear Programming Machine (LPM), (Kernel) Perceptrons and also algorithms to train hidden markov models are implemented. The input feature-objects can be dense, sparse or strings and of type int/short/double/char and can be converted into different feature types. Chains of preprocessors (e.g. substracting the mean) can be attached to each feature object allowing for on-the-fly pre-processing. . SHOGUN comes in different flavours, a stand-a-lone version and also with interfaces to Matlab(tm), R, Octave, Readline and Python. This is the Octave package. Original-Maintainer: Soeren Sonnenburg chroot-autobuild/build/buildd/shogun-r_0.6.7-1ubuntu1_powerpc.deb: new debian package, version 2.0. size 771296 bytes: control archive= 2014 bytes. 1771 bytes, 31 lines control 3089 bytes, 38 lines md5sums Package: shogun-r Source: shogun Version: 0.6.7-1ubuntu1 Architecture: powerpc Maintainer: Ubuntu MOTU Developers Installed-Size: 2188 Depends: libatlas3gf-base | liblapack3gf | liblapack.so.3gf, libatlas3gf-base | libatlas.so.3gf, libc6 (>= 2.7), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), r-base-core Section: science Priority: optional Homepage: http://www.shogun-toolbox.org Description: Large Scale Machine Learning Toolbox SHOGUN - is a new machine learning toolbox with focus on large scale kernel methods and especially on Support Vector Machines (SVM) with focus to bioinformatics. It provides a generic SVM object interfacing to several different SVM implementations. Each of the SVMs can be combined with a variety of the many kernels implemented. It can deal with weighted linear combination of a number of sub-kernels, each of which not necessarily working on the same domain, where an optimal sub-kernel weighting can be learned using Multiple Kernel Learning. Apart from SVM 2-class classification and regression problems, a number of linear methods like Linear Discriminant Analysis (LDA), Linear Programming Machine (LPM), (Kernel) Perceptrons and also algorithms to train hidden markov models are implemented. The input feature-objects can be dense, sparse or strings and of type int/short/double/char and can be converted into different feature types. Chains of preprocessors (e.g. substracting the mean) can be attached to each feature object allowing for on-the-fly pre-processing. . SHOGUN comes in different flavours, a stand-a-lone version and also with interfaces to Matlab(tm), R, Octave, Readline and Python. This is the R package. 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shogun-octave-modular shogun-octave shogun-r Architecture: powerpc Version: 0.6.7-1ubuntu1 Distribution: jaunty Urgency: low Maintainer: Ubuntu/powerpc Build Daemon Changed-By: Stefan Ebner Description: shogun-dbg - Large Scale Machine Learning Toolbox shogun-doc - Large Scale Machine Learning Toolbox shogun-octave - Large Scale Machine Learning Toolbox shogun-octave-modular - Large Scale Machine Learning Toolbox shogun-python - Large Scale Machine Learning Toolbox shogun-python-modular - Large Scale Machine Learning Toolbox shogun-r - Large Scale Machine Learning Toolbox shogun-readline - Large Scale Machine Learning Toolbox Changes: shogun (0.6.7-1ubuntu1) jaunty; urgency=low . * Merge from Debian unstable, Remaining Ubuntu changes: - Add !lpia to libatlas-base-dev build depends. 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Purging configuration files for fontconfig-config ... Removing libhtml-parser-perl ... Removing ttf-dejavu ... Removing libx11-6 ... Purging configuration files for libx11-6 ... Removing libglib2.0-0 ... Purging configuration files for libglib2.0-0 ... Removing libxcb-xlib0 ... Purging configuration files for libxcb-xlib0 ... Removing libhtml-tagset-perl ... Removing libxml2 ... Purging configuration files for libxml2 ... Removing libice6 ... Purging configuration files for libice6 ... Removing libgpg-error0 ... Purging configuration files for libgpg-error0 ... Removing ttf-dejavu-extra ... Purging configuration files for ttf-dejavu-extra ... Removing ttf-dejavu-core ... Purging configuration files for ttf-dejavu-core ... Removing liburi-perl ... Removing libxcb1 ... Purging configuration files for libxcb1 ... Removing libxau6 ... Purging configuration files for libxau6 ... Removing libxdmcp6 ... Purging configuration files for libxdmcp6 ... Removing libx11-data ... Removing x11-common ... Purging configuration files for x11-common ... dpkg - warning: while removing x11-common, directory `/usr/X11R6' not empty so not removed. dpkg - warning: while removing x11-common, directory `/usr/share/X11' not empty so not removed. Removing defoma ... Purging configuration files for defoma ... Removing whiptail ... Removing file ... Purging configuration files for file ... Removing libnewt0.52 ... Purging configuration files for libnewt0.52 ... Removing libpopt0 ... Purging configuration files for libpopt0 ... Removing libmagic1 ... Purging configuration files for libmagic1 ... Removing libsasl2-2 ... Purging configuration files for libsasl2-2 ... Removing libsasl2-modules ... Removing libssl0.9.8 ... Purging configuration files for libssl0.9.8 ... ****************************************************************************** Finished at 20081223-1541 Build needed 01:26:33, 688464k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '820429-1912710'] Scanning for processes to kill in build 820429-1912710... Scanning for processes to kill in build /home/buildd/build-820429-1912710/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '820429-1912710'] Unmounting chroot for build 820429-1912710... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '820429-1912710'] Removing build 820429-1912710