tm-align 20110130-2 source package in Ubuntu


tm-align (20110130-2) unstable; urgency=low

  * New upstream version (Closes: #447505)
    - 2011/01/30: An open source license is attached to the program
  * Reverting changelog to keep the history.

tm-align (20110130-1) unstable; urgency=low

  * Initial release.
  * Highly efficient debian/changelog.

tm-align (20110124-1) unstable; urgency=low

  * New upstream version
    - 2005/06/01: A small bug of two-point superposition was fixed.
    - 2005/10/19: the program was reformed so that the alignment results
                  are not dependent on the specific compilers.
    - 2006/06/20: select 'A' if there is altLoc when reading PDB file.
    - 2007/02/27: rotation matrix from Chain-1 to Chain-2 was added.
    - 2007/04/18: added options with TM-score normalized by average
                  length, shorter length, or longer length of two
    - 2007/05/23: added additional output file 'TM.sup_all' for showing
                  all atoms while 'TM.sup' is only for aligned atoms
    - 2007/09/19: added a new feature alignment to deal with the problem
                  of aligning fractional structures (e.g. protein
    - 2007/10/16: A bug for irregular bond-length models was fixed.
    - 2009/03/14: A new initial alignment was added and previous initial
                  alignments are further enhanced. This change increased
                  accuracy by 4% but increases CPU cost by 40%.
    - 2009/08/20: A bug for asymmetry alignment result was fixed.
    - 2010/08/02: A new RMSD matrix was used to remove obsolete
                  statements. Staled subroutines were deleted.
    - 2011/01/03: The length of pdb file names were extended to 500
    - 2011/01/24: Fixed a bug on output file name created on 2011/01/03 
  * Tweaked get-orig-source in rules to spot version in upstream file

  * New standards version 3.9.4

tm-align (20050601-2) UNRELEASED; urgency=low

  * Updated to Standards-Version 3.7.3 (no changes needed)

tm-align (20050601-1) unstable; urgency=low

  * Initial packaging.
 -- Ubuntu Archive Auto-Sync <email address hidden>   Wed,  04 May 2011 12:13:20 +0000

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Ubuntu Archive Auto-Sync on 2011-05-04
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Debian Med
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File Size SHA-256 Checksum
tm-align_20110130.orig.tar.gz 20.2 KiB 3824d2a0985019843c339931a5dab18ff5bbb946466bbd7e23472377a6e00000
tm-align_20110130-2.debian.tar.gz 7.6 KiB c1984eaab3a4cff6974967223d72f2dd8d13b8bb0bc06038484298fa5570174d
tm-align_20110130-2.dsc 1.4 KiB 5d6a25d9994b5d1057742d53fdcff9562dcceb3b30607a17b981665ef188f8ba

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