https://launchpad.net/ubuntu/+source/toppic/1.3.0+dfsg1-4build1/+build/20404003 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-ppc64el-016 4.15.0-128-generic #131-Ubuntu SMP Wed Dec 9 06:54:14 UTC 2020 ppc64le Buildd toolchain package versions: launchpad-buildd_193~468~ubuntu18.04.1 python3-lpbuildd_193~468~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 13 Dec 06:25:54 ntpdate[2058]: adjust time server 10.211.37.1 offset 0.006025 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=hirsute --arch=ppc64el PACKAGEBUILD-20404003 --image-type chroot /home/buildd/filecache-default/562b8b0d733db483afe9600af35c69ac54075a74 Creating target for build PACKAGEBUILD-20404003 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=hirsute --arch=ppc64el PACKAGEBUILD-20404003 Starting target for build PACKAGEBUILD-20404003 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=hirsute --arch=ppc64el PACKAGEBUILD-20404003 'deb http://ftpmaster.internal/ubuntu hirsute main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-security main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-updates main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-20404003 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=hirsute --arch=ppc64el PACKAGEBUILD-20404003 Updating target for build PACKAGEBUILD-20404003 Get:1 http://ftpmaster.internal/ubuntu hirsute InRelease [269 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed InRelease [121 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main ppc64el Packages [1355 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main Translation-en [512 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el Packages [12.5 MB] Get:8 http://ftpmaster.internal/ubuntu hirsute/universe Translation-en [5362 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el Packages [143 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main Translation-en [57.1 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el Packages [694 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/universe Translation-en [346 kB] Fetched 21.6 MB in 8s (2812 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libisl23 libperl5.32 perl-modules-5.32 The following packages will be upgraded: adduser apt base-files base-passwd bash binutils binutils-common binutils-powerpc64le-linux-gnu bsdutils coreutils cpp-10 dash dpkg dpkg-dev fakeroot g++-10 gcc-10 gcc-10-base grep init init-system-helpers libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libfakeroot libgcc-10-dev libgcc-s1 libgcrypt20 libgomp1 libgssapi-krb5-2 libidn2-0 libip4tc2 libitm1 libk5crypto3 libkrb5-3 libkrb5support0 liblsan0 liblz4-1 libmount1 libmpc3 libncurses6 libncursesw6 libnpth0 libp11-kit0 libpcre2-8-0 libquadmath0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libssl1.1 libstdc++-10-dev libstdc++6 libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libtsan0 libubsan1 libudev1 libuuid1 linux-libc-dev login mount ncurses-base ncurses-bin openssl passwd perl perl-base readline-common systemd systemd-sysv systemd-timesyncd sysvinit-utils tar tzdata util-linux 102 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 174 MB of archives. After this operation, 462 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcrypt-dev ppc64el 1:4.4.17-1ubuntu1 [131 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libc6-dev ppc64el 2.32-0ubuntu5 [2131 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libc-dev-bin ppc64el 2.32-0ubuntu5 [31.4 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcrypt1 ppc64el 1:4.4.17-1ubuntu1 [99.8 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el linux-libc-dev ppc64el 5.8.0-32.34+21.04.1 [1134 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libtirpc-common all 1.2.6-3 [7444 B] Get:7 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libk5crypto3 ppc64el 1.17-10ubuntu1 [105 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgssapi-krb5-2 ppc64el 1.17-10ubuntu1 [135 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libkrb5-3 ppc64el 1.17-10ubuntu1 [375 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libkrb5support0 ppc64el 1.17-10ubuntu1 [34.8 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libssl1.1 ppc64el 1.1.1f-1ubuntu5 [1363 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libtirpc-dev ppc64el 1.2.6-3 [208 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libtirpc3 ppc64el 1.2.6-3 [89.2 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libisl23 ppc64el 0.23-1 [713 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcc1-0 ppc64el 10.2.1-1ubuntu1 [42.0 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute/main ppc64el gcc-10-base ppc64el 10.2.1-1ubuntu1 [19.4 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgcc-s1 ppc64el 10.2.1-1ubuntu1 [30.1 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgomp1 ppc64el 10.2.1-1ubuntu1 [108 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libitm1 ppc64el 10.2.1-1ubuntu1 [28.6 kB] Get:20 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libatomic1 ppc64el 10.2.1-1ubuntu1 [9976 B] Get:21 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libasan6 ppc64el 10.2.1-1ubuntu1 [2105 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute/main ppc64el liblsan0 ppc64el 10.2.1-1ubuntu1 [847 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libtsan0 ppc64el 10.2.1-1ubuntu1 [2029 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libubsan1 ppc64el 10.2.1-1ubuntu1 [800 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libquadmath0 ppc64el 10.2.1-1ubuntu1 [149 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute/main ppc64el g++-10 ppc64el 10.2.1-1ubuntu1 [41.1 MB] Get:27 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libstdc++-10-dev ppc64el 10.2.1-1ubuntu1 [1793 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgcc-10-dev ppc64el 10.2.1-1ubuntu1 [1247 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute/main ppc64el gcc-10 ppc64el 10.2.1-1ubuntu1 [44.0 MB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main ppc64el cpp-10 ppc64el 10.2.1-1ubuntu1 [37.6 MB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libstdc++6 ppc64el 10.2.1-1ubuntu1 [541 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libmpc3 ppc64el 1.2.0-1 [47.1 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libctf0 ppc64el 2.35.50.20201210-0ubuntu2 [85.5 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libctf-nobfd0 ppc64el 2.35.50.20201210-0ubuntu2 [85.8 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libbinutils ppc64el 2.35.50.20201210-0ubuntu2 [534 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el binutils-common ppc64el 2.35.50.20201210-0ubuntu2 [216 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el binutils ppc64el 2.35.50.20201210-0ubuntu2 [3384 B] Get:38 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el binutils-powerpc64le-linux-gnu ppc64el 2.35.50.20201210-0ubuntu2 [1827 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libc6 ppc64el 2.32-0ubuntu5 [2673 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute/main ppc64el base-files ppc64el 11ubuntu16 [60.7 kB] Get:41 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el bash ppc64el 5.1-1ubuntu1 [748 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute/main ppc64el bsdutils ppc64el 1:2.36.1-1ubuntu2 [91.9 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el coreutils ppc64el 8.32-4ubuntu2 [1411 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute/main ppc64el tar ppc64el 1.32+dfsg-1 [317 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dpkg ppc64el 1.20.5ubuntu3 [1199 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dash ppc64el 0.5.11+git20200708+dd9ef66+really0.5.10.2-0ubuntu1 [101 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute/main ppc64el grep ppc64el 3.6-1 [160 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute/main ppc64el login ppc64el 1:4.8.1-1ubuntu7 [223 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libncurses6 ppc64el 6.2+20201114-1 [122 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libncursesw6 ppc64el 6.2+20201114-1 [153 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libtinfo6 ppc64el 6.2+20201114-1 [104 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main ppc64el ncurses-bin ppc64el 6.2+20201114-1 [180 kB] Get:53 http://ftpmaster.internal/ubuntu hirsute/main ppc64el perl-modules-5.32 all 5.32.0-5 [2754 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libperl5.32 ppc64el 5.32.0-5 [4037 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute/main ppc64el perl ppc64el 5.32.0-5 [225 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute/main ppc64el perl-base ppc64el 5.32.0-5 [1546 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute/main ppc64el util-linux ppc64el 2.36.1-1ubuntu2 [1118 kB] Get:58 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdebconfclient0 ppc64el 0.255ubuntu1 [6148 B] Get:59 http://ftpmaster.internal/ubuntu hirsute/main ppc64el base-passwd ppc64el 3.5.48 [49.6 kB] Get:60 http://ftpmaster.internal/ubuntu hirsute/main ppc64el init-system-helpers all 1.59 [38.2 kB] Get:61 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libc-bin ppc64el 2.32-0ubuntu5 [637 kB] Get:62 http://ftpmaster.internal/ubuntu hirsute/main ppc64el ncurses-base all 6.2+20201114-1 [18.5 kB] Get:63 http://ftpmaster.internal/ubuntu hirsute/main ppc64el sysvinit-utils ppc64el 2.96-5ubuntu1 [22.8 kB] Get:64 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgcrypt20 ppc64el 1.8.7-2ubuntu1 [444 kB] Get:65 http://ftpmaster.internal/ubuntu hirsute/main ppc64el liblz4-1 ppc64el 1.9.3-0ubuntu1 [70.0 kB] Get:66 http://ftpmaster.internal/ubuntu hirsute/main ppc64el systemd-sysv ppc64el 246.6-5ubuntu1 [10.3 kB] Get:67 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libaudit-common all 1:2.8.5-3ubuntu3 [4048 B] Get:68 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcap-ng0 ppc64el 0.7.9-2.2build1 [11.7 kB] Get:69 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libaudit1 ppc64el 1:2.8.5-3ubuntu3 [42.5 kB] Get:70 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libpcre2-8-0 ppc64el 10.35-2ubuntu1 [204 kB] Get:71 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libselinux1 ppc64el 3.1-2build2 [81.5 kB] Get:72 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsemanage-common all 3.1-1build2 [10.0 kB] Get:73 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsemanage1 ppc64el 3.1-1build2 [97.0 kB] Get:74 http://ftpmaster.internal/ubuntu hirsute/main ppc64el passwd ppc64el 1:4.8.1-1ubuntu7 [804 kB] Get:75 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el adduser all 3.118ubuntu4 [163 kB] Get:76 http://ftpmaster.internal/ubuntu hirsute/main ppc64el systemd-timesyncd ppc64el 246.6-5ubuntu1 [28.8 kB] Get:77 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libapparmor1 ppc64el 3.0.0-0ubuntu5 [39.6 kB] Get:78 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcap2 ppc64el 1:2.44-1 [19.8 kB] Get:79 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libblkid1 ppc64el 2.36.1-1ubuntu2 [151 kB] Get:80 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libudev1 ppc64el 246.6-5ubuntu1 [82.8 kB] Get:81 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdevmapper1.02.1 ppc64el 2:1.02.167-1ubuntu4 [157 kB] Get:82 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libuuid1 ppc64el 2.36.1-1ubuntu2 [23.1 kB] Get:83 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcryptsetup12 ppc64el 2:2.3.4-1ubuntu1 [228 kB] Get:84 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libidn2-0 ppc64el 2.3.0-4 [55.3 kB] Get:85 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libip4tc2 ppc64el 1.8.5-3ubuntu4 [22.0 kB] Get:86 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libmount1 ppc64el 2.36.1-1ubuntu2 [166 kB] Get:87 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libseccomp2 ppc64el 2.4.3-1ubuntu6 [47.7 kB] Get:88 http://ftpmaster.internal/ubuntu hirsute/main ppc64el mount ppc64el 2.36.1-1ubuntu2 [128 kB] Get:89 http://ftpmaster.internal/ubuntu hirsute/main ppc64el systemd ppc64el 246.6-5ubuntu1 [4893 kB] Get:90 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsystemd0 ppc64el 246.6-5ubuntu1 [315 kB] Get:91 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libapt-pkg6.0 ppc64el 2.1.13 [930 kB] Get:92 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el apt ppc64el 2.1.13 [1328 kB] Get:93 http://ftpmaster.internal/ubuntu hirsute/main ppc64el init ppc64el 1.59 [6168 B] Get:94 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsmartcols1 ppc64el 2.36.1-1ubuntu2 [107 kB] Get:95 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libp11-kit0 ppc64el 0.23.22-1 [203 kB] Get:96 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el readline-common all 8.1-1 [54.1 kB] Get:97 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libreadline8 ppc64el 8.1-1 [151 kB] Get:98 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libsqlite3-0 ppc64el 3.34.0-1 [628 kB] Get:99 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el openssl ppc64el 1.1.1f-1ubuntu5 [621 kB] Get:100 http://ftpmaster.internal/ubuntu hirsute/main ppc64el tzdata all 2020d-1ubuntu1 [293 kB] Get:101 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dpkg-dev all 1.20.5ubuntu3 [758 kB] Get:102 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdpkg-perl all 1.20.5ubuntu3 [232 kB] Get:103 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libfakeroot ppc64el 1.25.3-1.1 [28.6 kB] Get:104 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el fakeroot ppc64el 1.25.3-1.1 [66.4 kB] Get:105 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libnpth0 ppc64el 1.6-3 [8640 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 174 MB in 10s (17.5 MB/s) (Reading database ... 12922 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.17-1ubuntu1_ppc64el.deb ... Unpacking libcrypt-dev:ppc64el (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Preparing to unpack .../libc6-dev_2.32-0ubuntu5_ppc64el.deb ... Unpacking libc6-dev:ppc64el (2.32-0ubuntu5) over (2.32-0ubuntu3) ... Preparing to unpack .../libc-dev-bin_2.32-0ubuntu5_ppc64el.deb ... Unpacking libc-dev-bin (2.32-0ubuntu5) over (2.32-0ubuntu3) ... Preparing to unpack .../libcrypt1_1%3a4.4.17-1ubuntu1_ppc64el.deb ... Unpacking libcrypt1:ppc64el (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Setting up libcrypt1:ppc64el (1:4.4.17-1ubuntu1) ... (Reading database ... 12921 files and directories currently installed.) Preparing to unpack .../00-linux-libc-dev_5.8.0-32.34+21.04.1_ppc64el.deb ... Unpacking linux-libc-dev:ppc64el (5.8.0-32.34+21.04.1) over (5.8.0-25.26) ... Preparing to unpack .../01-libtirpc-common_1.2.6-3_all.deb ... Unpacking libtirpc-common (1.2.6-3) over (1.2.6-1build1) ... 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Setting up libkrb5support0:ppc64el (1.17-10ubuntu1) ... Setting up tzdata (2020d-1ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Dec 13 06:26:56 UTC 2020. Universal Time is now: Sun Dec 13 06:26:56 UTC 2020. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.25.3-1.1) ... Setting up libncurses6:ppc64el (6.2+20201114-1) ... Setting up libquadmath0:ppc64el (10.2.1-1ubuntu1) ... Setting up libmpc3:ppc64el (1.2.0-1) ... Setting up libatomic1:ppc64el (10.2.1-1ubuntu1) ... Setting up libncursesw6:ppc64el (6.2+20201114-1) ... Setting up libk5crypto3:ppc64el (1.17-10ubuntu1) ... Setting up libperl5.32:ppc64el (5.32.0-5) ... Setting up libubsan1:ppc64el (10.2.1-1ubuntu1) ... Setting up libcrypt-dev:ppc64el (1:4.4.17-1ubuntu1) ... Setting up libkrb5-3:ppc64el (1.17-10ubuntu1) ... Setting up libbinutils:ppc64el (2.35.50.20201210-0ubuntu2) ... Setting up libisl23:ppc64el (0.23-1) ... Setting up libc-dev-bin (2.32-0ubuntu5) ... Setting up openssl (1.1.1f-1ubuntu5) ... Setting up readline-common (8.1-1) ... Setting up libcc1-0:ppc64el (10.2.1-1ubuntu1) ... Setting up liblsan0:ppc64el (10.2.1-1ubuntu1) ... Setting up cpp-10 (10.2.1-1ubuntu1) ... Setting up libitm1:ppc64el (10.2.1-1ubuntu1) ... Setting up libtsan0:ppc64el (10.2.1-1ubuntu1) ... Setting up libctf0:ppc64el (2.35.50.20201210-0ubuntu2) ... Setting up libgcc-10-dev:ppc64el (10.2.1-1ubuntu1) ... Setting up libreadline8:ppc64el (8.1-1) ... Setting up perl (5.32.0-5) ... Setting up libgssapi-krb5-2:ppc64el (1.17-10ubuntu1) ... Setting up libdpkg-perl (1.20.5ubuntu3) ... Setting up binutils-powerpc64le-linux-gnu (2.35.50.20201210-0ubuntu2) ... Setting up libtirpc3:ppc64el (1.2.6-3) ... Setting up binutils (2.35.50.20201210-0ubuntu2) ... Setting up dpkg-dev (1.20.5ubuntu3) ... Setting up libtirpc-dev:ppc64el (1.2.6-3) ... Setting up gcc-10 (10.2.1-1ubuntu1) ... Setting up libc6-dev:ppc64el (2.32-0ubuntu5) ... Setting up libstdc++-10-dev:ppc64el (10.2.1-1ubuntu1) ... Setting up g++-10 (10.2.1-1ubuntu1) ... Processing triggers for libc-bin (2.32-0ubuntu5) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-20404003 ppc64el hirsute-proposed -c chroot:build-PACKAGEBUILD-20404003 --arch=ppc64el --dist=hirsute-proposed --nolog toppic_1.3.0+dfsg1-4build1.dsc Initiating build PACKAGEBUILD-20404003 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-128-generic #131-Ubuntu SMP Wed Dec 9 06:54:14 UTC 2020 ppc64le sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-ppc64el-016.buildd +==============================================================================+ | toppic 1.3.0+dfsg1-4build1 (ppc64el) Sun, 13 Dec 2020 06:26:58 +0000 | +==============================================================================+ Package: toppic Version: 1.3.0+dfsg1-4build1 Source Version: 1.3.0+dfsg1-4build1 Distribution: hirsute-proposed Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-20404003/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- toppic_1.3.0+dfsg1-4build1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/toppic-GETIiy/toppic-1.3.0+dfsg1' with '<>' I: NOTICE: Log filtering will replace 'build/toppic-GETIiy' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-CBDPi3/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-CBDPi3/apt_archive ./ InRelease Get:2 copy:/<>/resolver-CBDPi3/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-CBDPi3/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-CBDPi3/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-CBDPi3/apt_archive ./ Packages [433 B] Fetched 1739 B in 0s (32.4 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-CBDPi3/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14856 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), dpkg-dev (>= 1.18.25), cmake (>= 3.12), pkg-config, libhts-dev, libboost-dev, libboost-filesystem-dev, libboost-program-options-dev, libboost-thread-dev, libboost-system-dev, libboost-iostreams-dev, libboost-chrono-dev, libxerces-c-dev, qtbase5-dev, libpwizlite-dev, zlib1g-dev, python3-docutils, libjs-filesaver, fonts-font-awesome, fonts-freefont-ttf, libjs-bootstrap4, libjs-popper.js, libjs-jquery-ui, node-jquery Filtered Build-Depends: debhelper-compat (= 12), dpkg-dev (>= 1.18.25), cmake (>= 3.12), pkg-config, libhts-dev, libboost-dev, libboost-filesystem-dev, libboost-program-options-dev, libboost-thread-dev, libboost-system-dev, libboost-iostreams-dev, libboost-chrono-dev, libxerces-c-dev, qtbase5-dev, libpwizlite-dev, zlib1g-dev, python3-docutils, libjs-filesaver, fonts-font-awesome, fonts-freefont-ttf, libjs-bootstrap4, libjs-popper.js, libjs-jquery-ui, node-jquery dpkg-deb: building package 'sbuild-build-depends-toppic-dummy' in '/<>/resolver-CBDPi3/apt_archive/sbuild-build-depends-toppic-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-toppic-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-CBDPi3/apt_archive ./ InRelease Get:2 copy:/<>/resolver-CBDPi3/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-CBDPi3/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-CBDPi3/apt_archive ./ Sources [678 B] Get:5 copy:/<>/resolver-CBDPi3/apt_archive ./ Packages [763 B] Fetched 2404 B in 0s (113 kB/s) Reading package lists... Reading package lists... Install toppic build dependencies (apt-based resolver) ------------------------------------------------------ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism docutils-common dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-font-awesome fonts-freefont-ttf gettext gettext-base groff-base icu-devtools intltool-debian javascript-common libarchive-zip-perl libarchive13 libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libboost-atomic1.74-dev libboost-atomic1.74.0 libboost-chrono-dev libboost-chrono1.74-dev libboost-chrono1.74.0 libboost-date-time1.74-dev libboost-date-time1.74.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.74-dev libboost-filesystem1.74.0 libboost-iostreams-dev libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-program-options-dev libboost-program-options1.74-dev libboost-program-options1.74.0 libboost-regex1.74-dev libboost-regex1.74.0 libboost-serialization1.74-dev libboost-serialization1.74.0 libboost-system-dev libboost-system1.74-dev libboost-system1.74.0 libboost-thread-dev libboost-thread1.74-dev libboost-thread1.74.0 libboost1.74-dev libbrotli1 libbsd0 libcroco3 libcups2 libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdbus-1-3 libdebhelper-perl libdeflate-dev libdeflate0 libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl-dev libegl-mesa0 libegl1 libelf1 libevdev2 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgbm1 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphite2-3 libgssapi3-heimdal libgudev-1.0-0 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts-dev libhts3 libhx509-5-heimdal libice6 libicu-dev libicu67 libinput-bin libinput10 libjpeg-turbo8 libjpeg8 libjs-bootstrap4 libjs-filesaver libjs-jquery libjs-jquery-ui libjs-popper.js libjsoncpp24 libkrb5-26-heimdal libldap-2.4-2 libllvm11 liblzma-dev libmagic-mgc libmagic1 libmd4c0 libmtdev1 libnghttp2-14 libpcre2-16-0 libpipeline1 libpsl5 libpthread-stubs0-dev libpwizlite-dev libpwizlite3 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libqt5concurrent5 libqt5core5a libqt5dbus5 libqt5gui5 libqt5network5 libqt5printsupport5 libqt5sql5 libqt5test5 libqt5widgets5 libqt5xml5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsm6 libssh-4 libsub-override-perl libtool libuchardet0 libuv1 libvulkan-dev libvulkan1 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwind0-heimdal libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext-dev libxext6 libxfixes3 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxrender1 libxshmfence1 libxxf86vm1 m4 mailcap man-db media-types mime-support node-jquery pkg-config po-debconf python3 python3-docutils python3-minimal python3-roman python3.9 python3.9-minimal qt5-qmake qt5-qmake-bin qtbase5-dev qtbase5-dev-tools qtchooser sgml-base shared-mime-info ucf x11-common x11proto-core-dev x11proto-dev x11proto-xext-dev xkb-data xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc cmake-doc ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev groff apache2 | lighttpd | httpd lrzip libboost-doc libboost1.74-doc libboost-container1.74-dev libboost-context1.74-dev libboost-contract1.74-dev libboost-coroutine1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev libboost-graph1.74-dev libboost-graph-parallel1.74-dev libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev libboost-python1.74-dev libboost-random1.74-dev libboost-stacktrace1.74-dev libboost-test1.74-dev libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev cups-common libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev icu-doc libjs-jquery-ui-docs liblzma-doc libthai0 qt5-image-formats-plugins qtwayland5 lm-sensors libtool-doc gfortran | fortran95-compiler gcj-jdk libx11-doc libxcb-doc libxerces-c-doc libxext-doc m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python3.9-venv python3.9-doc binfmt-support default-libmysqlclient-dev firebird-dev libpq-dev libsqlite3-dev unixodbc-dev sgml-base-doc Recommended packages: curl | wget | lynx dbus libarchive-cpio-perl libglib2.0-data xdg-user-dirs libldap-common publicsuffix qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme libqt5sql5-sqlite | libqt5sql5-mysql | libqt5sql5-odbc | libqt5sql5-psql | libqt5sql5-tds | libqt5sql5-ibase libsasl2-modules libltdl-dev mesa-vulkan-drivers | vulkan-icd libwacom-bin libjs-sizzle libmail-sendmail-perl libpaper-utils python3-pil python3-pygments libqt5opengl5-dev The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism docutils-common dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-font-awesome fonts-freefont-ttf gettext gettext-base groff-base icu-devtools intltool-debian javascript-common libarchive-zip-perl libarchive13 libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libboost-atomic1.74-dev libboost-atomic1.74.0 libboost-chrono-dev libboost-chrono1.74-dev libboost-chrono1.74.0 libboost-date-time1.74-dev libboost-date-time1.74.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.74-dev libboost-filesystem1.74.0 libboost-iostreams-dev libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-program-options-dev libboost-program-options1.74-dev libboost-program-options1.74.0 libboost-regex1.74-dev libboost-regex1.74.0 libboost-serialization1.74-dev libboost-serialization1.74.0 libboost-system-dev libboost-system1.74-dev libboost-system1.74.0 libboost-thread-dev libboost-thread1.74-dev libboost-thread1.74.0 libboost1.74-dev libbrotli1 libbsd0 libcroco3 libcups2 libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdbus-1-3 libdebhelper-perl libdeflate-dev libdeflate0 libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl-dev libegl-mesa0 libegl1 libelf1 libevdev2 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgbm1 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphite2-3 libgssapi3-heimdal libgudev-1.0-0 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts-dev libhts3 libhx509-5-heimdal libice6 libicu-dev libicu67 libinput-bin libinput10 libjpeg-turbo8 libjpeg8 libjs-bootstrap4 libjs-filesaver libjs-jquery libjs-jquery-ui libjs-popper.js libjsoncpp24 libkrb5-26-heimdal libldap-2.4-2 libllvm11 liblzma-dev libmagic-mgc libmagic1 libmd4c0 libmtdev1 libnghttp2-14 libpcre2-16-0 libpipeline1 libpsl5 libpthread-stubs0-dev libpwizlite-dev libpwizlite3 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libqt5concurrent5 libqt5core5a libqt5dbus5 libqt5gui5 libqt5network5 libqt5printsupport5 libqt5sql5 libqt5test5 libqt5widgets5 libqt5xml5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsm6 libssh-4 libsub-override-perl libtool libuchardet0 libuv1 libvulkan-dev libvulkan1 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwind0-heimdal libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext-dev libxext6 libxfixes3 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxrender1 libxshmfence1 libxxf86vm1 m4 mailcap man-db media-types mime-support node-jquery pkg-config po-debconf python3 python3-docutils python3-minimal python3-roman python3.9 python3.9-minimal qt5-qmake qt5-qmake-bin qtbase5-dev qtbase5-dev-tools qtchooser sbuild-build-depends-toppic-dummy sgml-base shared-mime-info ucf x11-common x11proto-core-dev x11proto-dev x11proto-xext-dev xkb-data xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 241 newly installed, 0 to remove and 0 not upgraded. Need to get 123 MB of archives. After this operation, 709 MB of additional disk space will be used. Get:1 copy:/<>/resolver-CBDPi3/apt_archive ./ sbuild-build-depends-toppic-dummy 0.invalid.0 [1052 B] Get:2 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libpython3.9-minimal ppc64el 3.9.1-1 [749 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libexpat1 ppc64el 2.2.10-1 [77.6 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el python3.9-minimal ppc64el 3.9.1-1 [1829 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main ppc64el python3-minimal ppc64el 3.9.0-3ubuntu1 [24.0 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main ppc64el media-types all 1.0.1ubuntu1 [10.9 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/main ppc64el mailcap all 3.67ubuntu1 [24.2 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main ppc64el mime-support all 3.66 [3696 B] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libpython3.9-stdlib ppc64el 3.9.1-1 [1754 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el python3.9 ppc64el 3.9.1-1 [414 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libpython3-stdlib ppc64el 3.9.0-3ubuntu1 [7292 B] Get:12 http://ftpmaster.internal/ubuntu hirsute/main ppc64el python3 ppc64el 3.9.0-3ubuntu1 [48.8 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main ppc64el bsdextrautils ppc64el 2.36.1-1ubuntu2 [83.5 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libuchardet0 ppc64el 0.0.7-1 [71.0 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main ppc64el groff-base ppc64el 1.22.4-5 [922 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libpipeline1 ppc64el 1.5.3-1 [29.6 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute/main ppc64el man-db ppc64el 2.9.3-2 [1148 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute/main ppc64el sgml-base all 1.30 [12.5 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libmagic-mgc ppc64el 1:5.39-3 [228 kB] Get:20 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libmagic1 ppc64el 1:5.39-3 [93.4 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute/main ppc64el file ppc64el 1:5.39-3 [24.7 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libbsd0 ppc64el 0.10.0-1 [55.1 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdbus-1-3 ppc64el 1.12.20-1ubuntu1 [200 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libelf1 ppc64el 0.182-1 [52.3 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libglib2.0-0 ppc64el 2.66.3-2 [1408 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libicu67 ppc64el 67.1-5 [8813 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libxml2 ppc64el 2.9.10+dfsg-6.3build1 [656 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute/main ppc64el shared-mime-info ppc64el 2.0-1 [440 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute/main ppc64el ucf all 3.0043 [56.1 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main ppc64el xkb-data all 2.29-2 [349 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main ppc64el gettext-base ppc64el 0.19.8.1-10build1 [52.5 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdrm-common all 2.4.103-2 [5580 B] Get:33 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdrm2 ppc64el 2.4.103-2 [39.2 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libedit2 ppc64el 3.1-20191231-1 [107 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libpsl5 ppc64el 0.21.0-1.1ubuntu1 [54.0 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libuv1 ppc64el 1.40.0-1 [90.2 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxau6 ppc64el 1:1.0.9-0ubuntu1 [7876 B] Get:38 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxdmcp6 ppc64el 1:1.1.3-0ubuntu1 [11.8 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb1 ppc64el 1.14-2 [50.2 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libx11-data all 2:1.6.12-1 [113 kB] Get:41 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libx11-6 ppc64el 2:1.6.12-1 [638 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxext6 ppc64el 2:1.3.4-0ubuntu1 [35.1 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsigsegv2 ppc64el 2.12-2build1 [14.4 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute/main ppc64el m4 ppc64el 1.4.18-4 [210 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute/main ppc64el autoconf all 2.69-11.1 [321 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main ppc64el autotools-dev all 20180224.1 [39.6 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute/main ppc64el automake all 1:1.16.3-1ubuntu1 [552 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute/main ppc64el autopoint all 0.19.8.1-10build1 [412 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el cmake-data all 3.18.4-1ubuntu3 [1705 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libarchive13 ppc64el 3.4.3-2 [416 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libbrotli1 ppc64el 1.0.9-2build2 [304 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libroken18-heimdal ppc64el 7.7.0+dfsg-2 [46.4 kB] Get:53 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libasn1-8-heimdal ppc64el 7.7.0+dfsg-2 [176 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libheimbase1-heimdal ppc64el 7.7.0+dfsg-2 [32.4 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libhcrypto4-heimdal ppc64el 7.7.0+dfsg-2 [108 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libwind0-heimdal ppc64el 7.7.0+dfsg-2 [48.9 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libhx509-5-heimdal ppc64el 7.7.0+dfsg-2 [120 kB] Get:58 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libkrb5-26-heimdal ppc64el 7.7.0+dfsg-2 [234 kB] Get:59 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libheimntlm0-heimdal ppc64el 7.7.0+dfsg-2 [17.4 kB] Get:60 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgssapi3-heimdal ppc64el 7.7.0+dfsg-2 [105 kB] Get:61 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsasl2-modules-db ppc64el 2.1.27+dfsg-2ubuntu1 [16.8 kB] Get:62 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsasl2-2 ppc64el 2.1.27+dfsg-2ubuntu1 [60.0 kB] Get:63 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libldap-2.4-2 ppc64el 2.4.53+dfsg-1ubuntu5 [177 kB] Get:64 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libnghttp2-14 ppc64el 1.42.0-1 [83.7 kB] Get:65 http://ftpmaster.internal/ubuntu hirsute/main ppc64el librtmp1 ppc64el 2.4+20151223.gitfa8646d.1-2build2 [59.2 kB] Get:66 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libssh-4 ppc64el 0.9.5-1 [195 kB] Get:67 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcurl4 ppc64el 7.72.0-1ubuntu1 [262 kB] Get:68 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libjsoncpp24 ppc64el 1.9.4-3 [80.1 kB] Get:69 http://ftpmaster.internal/ubuntu hirsute/main ppc64el librhash0 ppc64el 1.4.0-1 [120 kB] Get:70 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el cmake ppc64el 3.18.4-1ubuntu3 [6420 kB] Get:71 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libtool all 2.4.6-14 [161 kB] Get:72 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dh-autoreconf all 19 [16.1 kB] Get:73 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libdebhelper-perl all 13.3ubuntu1 [64.1 kB] Get:74 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libarchive-zip-perl all 1.68-1 [90.2 kB] Get:75 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsub-override-perl all 0.09-2 [9532 B] Get:76 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:77 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:78 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dwz ppc64el 0.13+20201015-2 [156 kB] Get:79 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcroco3 ppc64el 0.6.13-1 [92.1 kB] Get:80 http://ftpmaster.internal/ubuntu hirsute/main ppc64el gettext ppc64el 0.19.8.1-10build1 [959 kB] Get:81 http://ftpmaster.internal/ubuntu hirsute/main ppc64el intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:82 http://ftpmaster.internal/ubuntu hirsute/main ppc64el po-debconf all 1.0.21 [233 kB] Get:83 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el debhelper all 13.3ubuntu1 [881 kB] Get:84 http://ftpmaster.internal/ubuntu hirsute/main ppc64el xml-core all 0.18+nmu1 [21.6 kB] Get:85 http://ftpmaster.internal/ubuntu hirsute/main ppc64el docutils-common all 0.16+dfsg-3 [116 kB] Get:86 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libfreetype6 ppc64el 2.10.4+dfsg-1 [425 kB] Get:87 http://ftpmaster.internal/ubuntu hirsute/main ppc64el fonts-dejavu-core all 2.37-2 [1041 kB] Get:88 http://ftpmaster.internal/ubuntu hirsute/main ppc64el fonts-freefont-ttf all 20120503-10 [2440 kB] Get:89 http://ftpmaster.internal/ubuntu hirsute/main ppc64el fontconfig-config all 2.13.1-4.2ubuntu2 [28.6 kB] Get:90 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libfontconfig1 ppc64el 2.13.1-4.2ubuntu2 [150 kB] Get:91 http://ftpmaster.internal/ubuntu hirsute/main ppc64el fontconfig ppc64el 2.13.1-4.2ubuntu2 [183 kB] Get:92 http://ftpmaster.internal/ubuntu hirsute/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-2 [514 kB] Get:93 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el icu-devtools ppc64el 67.1-5 [210 kB] Get:94 http://ftpmaster.internal/ubuntu hirsute/main ppc64el javascript-common all 11 [6066 B] Get:95 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libavahi-common-data ppc64el 0.8-3ubuntu2 [25.2 kB] Get:96 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libavahi-common3 ppc64el 0.8-3ubuntu2 [23.0 kB] Get:97 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libavahi-client3 ppc64el 0.8-3ubuntu2 [28.4 kB] Get:98 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost1.74-dev ppc64el 1.74.0-3ubuntu1 [9507 kB] Get:99 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-atomic1.74.0 ppc64el 1.74.0-3ubuntu1 [219 kB] Get:100 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-atomic1.74-dev ppc64el 1.74.0-3ubuntu1 [216 kB] Get:101 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-chrono1.74.0 ppc64el 1.74.0-3ubuntu1 [227 kB] Get:102 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-chrono1.74-dev ppc64el 1.74.0-3ubuntu1 [231 kB] Get:103 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libboost-chrono-dev ppc64el 1.74.0.3ubuntu1 [3752 B] Get:104 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-date-time1.74.0 ppc64el 1.74.0-3ubuntu1 [216 kB] Get:105 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-serialization1.74.0 ppc64el 1.74.0-3ubuntu1 [315 kB] Get:106 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-serialization1.74-dev ppc64el 1.74.0-3ubuntu1 [361 kB] Get:107 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-date-time1.74-dev ppc64el 1.74.0-3ubuntu1 [221 kB] Get:108 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libboost-dev ppc64el 1.74.0.3ubuntu1 [3324 B] Get:109 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-filesystem1.74.0 ppc64el 1.74.0-3ubuntu1 [257 kB] Get:110 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-system1.74.0 ppc64el 1.74.0-3ubuntu1 [216 kB] Get:111 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-system1.74-dev ppc64el 1.74.0-3ubuntu1 [213 kB] Get:112 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-filesystem1.74-dev ppc64el 1.74.0-3ubuntu1 [278 kB] Get:113 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libboost-filesystem-dev ppc64el 1.74.0.3ubuntu1 [3160 B] Get:114 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-regex1.74.0 ppc64el 1.74.0-3ubuntu1 [487 kB] Get:115 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libicu-dev ppc64el 67.1-5 [9990 kB] Get:116 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-regex1.74-dev ppc64el 1.74.0-3ubuntu1 [557 kB] Get:117 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-iostreams1.74.0 ppc64el 1.74.0-3ubuntu1 [237 kB] Get:118 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libboost-iostreams1.74-dev ppc64el 1.74.0-3ubuntu1 [242 kB] Get:119 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libboost-iostreams-dev ppc64el 1.74.0.3ubuntu1 [3112 B] Get:120 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-program-options1.74.0 ppc64el 1.74.0-3ubuntu1 [331 kB] Get:121 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-program-options1.74-dev ppc64el 1.74.0-3ubuntu1 [363 kB] Get:122 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libboost-program-options-dev ppc64el 1.74.0.3ubuntu1 [3144 B] Get:123 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libboost-system-dev ppc64el 1.74.0.3ubuntu1 [3268 B] Get:124 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-thread1.74.0 ppc64el 1.74.0-3ubuntu1 [255 kB] Get:125 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libboost-thread1.74-dev ppc64el 1.74.0-3ubuntu1 [265 kB] Get:126 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libboost-thread-dev ppc64el 1.74.0.3ubuntu1 [3148 B] Get:127 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcups2 ppc64el 2.3.3-3ubuntu1 [278 kB] Get:128 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcurl3-gnutls ppc64el 7.72.0-1ubuntu1 [259 kB] Get:129 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcurl4-gnutls-dev ppc64el 7.72.0-1ubuntu1 [363 kB] Get:130 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libdeflate0 ppc64el 1.6-1 [64.0 kB] Get:131 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libdeflate-dev ppc64el 1.6-1 [48.0 kB] Get:132 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libdouble-conversion3 ppc64el 3.1.5-6.1 [39.3 kB] Get:133 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdrm-amdgpu1 ppc64el 2.4.103-2 [21.9 kB] Get:134 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdrm-nouveau2 ppc64el 2.4.103-2 [19.1 kB] Get:135 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdrm-radeon1 ppc64el 2.4.103-2 [24.3 kB] Get:136 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libglvnd0 ppc64el 1.3.2-1 [50.1 kB] Get:137 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libwayland-server0 ppc64el 1.18.0-2~exp1.1 [35.8 kB] Get:138 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgbm1 ppc64el 20.2.4-1 [35.5 kB] Get:139 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libglapi-mesa ppc64el 20.2.4-1 [27.8 kB] Get:140 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libwayland-client0 ppc64el 1.18.0-2~exp1.1 [27.4 kB] Get:141 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libx11-xcb1 ppc64el 2:1.6.12-1 [8792 B] Get:142 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-dri2-0 ppc64el 1.14-2 [7264 B] Get:143 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-dri3-0 ppc64el 1.14-2 [7092 B] Get:144 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-present0 ppc64el 1.14-2 [5824 B] Get:145 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-sync1 ppc64el 1.14-2 [9352 B] Get:146 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-xfixes0 ppc64el 1.14-2 [9820 B] Get:147 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxshmfence1 ppc64el 1.3-1 [5096 B] Get:148 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libegl-mesa0 ppc64el 20.2.4-1 [116 kB] Get:149 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libegl1 ppc64el 1.3.2-1 [40.4 kB] Get:150 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-glx0 ppc64el 1.14-2 [23.4 kB] Get:151 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxdamage1 ppc64el 1:1.1.5-2 [7260 B] Get:152 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxfixes3 ppc64el 1:5.0.3-2 [11.7 kB] Get:153 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxxf86vm1 ppc64el 1:1.1.4-1build1 [11.3 kB] Get:154 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libllvm11 ppc64el 1:11.0.1~+rc1-1~exp1 [16.4 MB] Get:155 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsensors-config all 1:3.6.0-2ubuntu1 [6092 B] Get:156 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsensors5 ppc64el 1:3.6.0-2ubuntu1 [31.7 kB] Get:157 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgl1-mesa-dri ppc64el 20.2.4-1 [8298 kB] Get:158 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libglx-mesa0 ppc64el 20.2.4-1 [164 kB] Get:159 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libglx0 ppc64el 1.3.2-1 [38.1 kB] Get:160 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgl1 ppc64el 1.3.2-1 [91.8 kB] Get:161 http://ftpmaster.internal/ubuntu hirsute/main ppc64el xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:162 http://ftpmaster.internal/ubuntu hirsute/main ppc64el x11proto-dev all 2020.1-1 [594 kB] Get:163 http://ftpmaster.internal/ubuntu hirsute/main ppc64el x11proto-core-dev all 2020.1-1 [2620 B] Get:164 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxau-dev ppc64el 1:1.0.9-0ubuntu1 [10.1 kB] Get:165 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxdmcp-dev ppc64el 1:1.1.3-0ubuntu1 [27.0 kB] Get:166 http://ftpmaster.internal/ubuntu hirsute/main ppc64el xtrans-dev all 1.4.0-1 [68.9 kB] Get:167 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libpthread-stubs0-dev ppc64el 0.4-1 [5388 B] Get:168 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb1-dev ppc64el 1.14-2 [88.6 kB] Get:169 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libx11-dev ppc64el 2:1.6.12-1 [731 kB] Get:170 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libglx-dev ppc64el 1.3.2-1 [14.0 kB] Get:171 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgl-dev ppc64el 1.3.2-1 [97.8 kB] Get:172 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libegl-dev ppc64el 1.3.2-1 [17.2 kB] Get:173 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libglu1-mesa ppc64el 9.0.1-1build1 [261 kB] Get:174 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libglu1-mesa-dev ppc64el 9.0.1-1build1 [309 kB] Get:175 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgraphite2-3 ppc64el 1.3.14-1 [73.3 kB] Get:176 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgudev-1.0-0 ppc64el 1:234-1 [14.6 kB] Get:177 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libharfbuzz0b ppc64el 2.6.7-1ubuntu1 [431 kB] Get:178 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libhts3 ppc64el 1.11-2 [426 kB] Get:179 http://ftpmaster.internal/ubuntu hirsute/main ppc64el liblzma-dev ppc64el 5.2.4-1ubuntu1 [164 kB] Get:180 http://ftpmaster.internal/ubuntu hirsute/main ppc64el zlib1g-dev ppc64el 1:1.2.11.dfsg-2ubuntu4 [166 kB] Get:181 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libhts-dev ppc64el 1.11-2 [3963 kB] Get:182 http://ftpmaster.internal/ubuntu hirsute/main ppc64el x11-common all 1:7.7+19ubuntu15 [22.2 kB] Get:183 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libice6 ppc64el 2:1.0.10-1 [44.9 kB] Get:184 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libevdev2 ppc64el 1.10.0+dfsg-1 [33.3 kB] Get:185 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libwacom-common all 1.6-1 [47.1 kB] Get:186 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libwacom2 ppc64el 1.6-1 [24.4 kB] Get:187 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libinput-bin ppc64el 1.16.4-1ubuntu1 [21.5 kB] Get:188 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libmtdev1 ppc64el 1.1.6-1 [17.5 kB] Get:189 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libinput10 ppc64el 1.16.4-1ubuntu1 [126 kB] Get:190 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libjpeg-turbo8 ppc64el 2.0.3-0ubuntu2 [155 kB] Get:191 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libjpeg8 ppc64el 8c-2ubuntu8 [2146 B] Get:192 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libjs-popper.js all 1.16.1+ds-2 [52.9 kB] Get:193 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libjs-bootstrap4 all 4.5.2+dfsg1-1 [2497 kB] Get:194 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libjs-filesaver all 2.0.2+dfsg-3 [8324 B] Get:195 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el node-jquery all 3.5.1+dfsg+~3.5.4-3 [396 kB] Get:196 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libjs-jquery all 3.5.1+dfsg+~3.5.4-3 [2364 B] Get:197 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libjs-jquery-ui all 1.12.1+dfsg-7 [231 kB] Get:198 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libmd4c0 ppc64el 0.4.6-1 [47.3 kB] Get:199 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libpcre2-16-0 ppc64el 10.35-2ubuntu1 [191 kB] Get:200 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libpwizlite3 ppc64el 3.0.3-1build1 [787 kB] Get:201 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el libpwizlite-dev ppc64el 3.0.3-1build1 [1237 kB] Get:202 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libqt5core5a ppc64el 5.15.2+dfsg-2 [1820 kB] Get:203 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libqt5concurrent5 ppc64el 5.15.2+dfsg-2 [34.7 kB] Get:204 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libqt5dbus5 ppc64el 5.15.2+dfsg-2 [201 kB] Get:205 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libqt5network5 ppc64el 5.15.2+dfsg-2 [651 kB] Get:206 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsm6 ppc64el 2:1.2.3-1 [17.6 kB] Get:207 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-icccm4 ppc64el 0.4.1-1.1 [11.2 kB] Get:208 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-shm0 ppc64el 1.14-2 [5892 B] Get:209 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-util1 ppc64el 0.4.0-1 [10.4 kB] Get:210 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-image0 ppc64el 0.4.0-1build1 [12.4 kB] Get:211 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-keysyms1 ppc64el 0.4.0-1build1 [8756 B] Get:212 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-randr0 ppc64el 1.14-2 [17.5 kB] Get:213 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-render0 ppc64el 1.14-2 [15.7 kB] Get:214 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-render-util0 ppc64el 0.3.9-1build1 [10.7 kB] Get:215 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-shape0 ppc64el 1.14-2 [6220 B] Get:216 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-xinerama0 ppc64el 1.14-2 [5536 B] Get:217 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-xinput0 ppc64el 1.14-2 [32.8 kB] Get:218 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxcb-xkb1 ppc64el 1.14-2 [31.4 kB] Get:219 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxkbcommon0 ppc64el 1.0.3-2 [130 kB] Get:220 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxkbcommon-x11-0 ppc64el 1.0.3-2 [14.9 kB] Get:221 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxrender1 ppc64el 1:0.9.10-1 [17.6 kB] Get:222 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libqt5gui5 ppc64el 5.15.2+dfsg-2 [3405 kB] Get:223 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libqt5widgets5 ppc64el 5.15.2+dfsg-2 [2418 kB] Get:224 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libqt5printsupport5 ppc64el 5.15.2+dfsg-2 [192 kB] Get:225 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libqt5sql5 ppc64el 5.15.2+dfsg-2 [114 kB] Get:226 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libqt5test5 ppc64el 5.15.2+dfsg-2 [132 kB] Get:227 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libqt5xml5 ppc64el 5.15.2+dfsg-2 [117 kB] Get:228 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libvulkan1 ppc64el 1.2.154.1-1 [109 kB] Get:229 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libvulkan-dev ppc64el 1.2.154.1-1 [562 kB] Get:230 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libxerces-c3.2 ppc64el 3.2.3+debian-2 [897 kB] Get:231 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el libxerces-c-dev ppc64el 3.2.3+debian-2 [1806 kB] Get:232 http://ftpmaster.internal/ubuntu hirsute/main ppc64el x11proto-xext-dev all 2020.1-1 [2620 B] Get:233 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxext-dev ppc64el 2:1.3.4-0ubuntu1 [91.2 kB] Get:234 http://ftpmaster.internal/ubuntu hirsute/main ppc64el pkg-config ppc64el 0.29.2-1ubuntu1 [49.5 kB] Get:235 http://ftpmaster.internal/ubuntu hirsute/main ppc64el python3-roman all 2.0.0-5 [8928 B] Get:236 http://ftpmaster.internal/ubuntu hirsute/main ppc64el python3-docutils all 0.16+dfsg-3 [369 kB] Get:237 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el qt5-qmake-bin ppc64el 5.15.2+dfsg-2 [987 kB] Get:238 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el qtchooser ppc64el 66-2build1 [27.8 kB] Get:239 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el qt5-qmake ppc64el 5.15.2+dfsg-2 [203 kB] Get:240 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el qtbase5-dev-tools ppc64el 5.15.2+dfsg-2 [874 kB] Get:241 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el qtbase5-dev ppc64el 5.15.2+dfsg-2 [1095 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 123 MB in 12s (10.2 MB/s) Selecting previously unselected package libpython3.9-minimal:ppc64el. (Reading database ... 14856 files and directories currently installed.) Preparing to unpack .../libpython3.9-minimal_3.9.1-1_ppc64el.deb ... Unpacking libpython3.9-minimal:ppc64el (3.9.1-1) ... Selecting previously unselected package libexpat1:ppc64el. Preparing to unpack .../libexpat1_2.2.10-1_ppc64el.deb ... Unpacking libexpat1:ppc64el (2.2.10-1) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../python3.9-minimal_3.9.1-1_ppc64el.deb ... Unpacking python3.9-minimal (3.9.1-1) ... Setting up libpython3.9-minimal:ppc64el (3.9.1-1) ... Setting up libexpat1:ppc64el (2.2.10-1) ... Setting up python3.9-minimal (3.9.1-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 15149 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.0-3ubuntu1_ppc64el.deb ... Unpacking python3-minimal (3.9.0-3ubuntu1) ... Selecting previously unselected package media-types. 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Selecting previously unselected package libgl-dev:ppc64el. Preparing to unpack .../159-libgl-dev_1.3.2-1_ppc64el.deb ... Unpacking libgl-dev:ppc64el (1.3.2-1) ... Selecting previously unselected package libegl-dev:ppc64el. Preparing to unpack .../160-libegl-dev_1.3.2-1_ppc64el.deb ... Unpacking libegl-dev:ppc64el (1.3.2-1) ... Selecting previously unselected package libglu1-mesa:ppc64el. Preparing to unpack .../161-libglu1-mesa_9.0.1-1build1_ppc64el.deb ... Unpacking libglu1-mesa:ppc64el (9.0.1-1build1) ... Selecting previously unselected package libglu1-mesa-dev:ppc64el. Preparing to unpack .../162-libglu1-mesa-dev_9.0.1-1build1_ppc64el.deb ... Unpacking libglu1-mesa-dev:ppc64el (9.0.1-1build1) ... Selecting previously unselected package libgraphite2-3:ppc64el. Preparing to unpack .../163-libgraphite2-3_1.3.14-1_ppc64el.deb ... Unpacking libgraphite2-3:ppc64el (1.3.14-1) ... Selecting previously unselected package libgudev-1.0-0:ppc64el. 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Selecting previously unselected package libqt5dbus5:ppc64el. Preparing to unpack .../192-libqt5dbus5_5.15.2+dfsg-2_ppc64el.deb ... Unpacking libqt5dbus5:ppc64el (5.15.2+dfsg-2) ... Selecting previously unselected package libqt5network5:ppc64el. Preparing to unpack .../193-libqt5network5_5.15.2+dfsg-2_ppc64el.deb ... Unpacking libqt5network5:ppc64el (5.15.2+dfsg-2) ... Selecting previously unselected package libsm6:ppc64el. Preparing to unpack .../194-libsm6_2%3a1.2.3-1_ppc64el.deb ... Unpacking libsm6:ppc64el (2:1.2.3-1) ... Selecting previously unselected package libxcb-icccm4:ppc64el. Preparing to unpack .../195-libxcb-icccm4_0.4.1-1.1_ppc64el.deb ... Unpacking libxcb-icccm4:ppc64el (0.4.1-1.1) ... Selecting previously unselected package libxcb-shm0:ppc64el. Preparing to unpack .../196-libxcb-shm0_1.14-2_ppc64el.deb ... Unpacking libxcb-shm0:ppc64el (1.14-2) ... Selecting previously unselected package libxcb-util1:ppc64el. 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Selecting previously unselected package sbuild-build-depends-toppic-dummy. Preparing to unpack .../230-sbuild-build-depends-toppic-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-toppic-dummy (0.invalid.0) ... Setting up libboost-chrono1.74.0:ppc64el (1.74.0-3ubuntu1) ... Setting up media-types (1.0.1ubuntu1) ... Setting up libpipeline1:ppc64el (1.5.3-1) ... Setting up libboost-system1.74.0:ppc64el (1.74.0-3ubuntu1) ... Setting up javascript-common (11) ... Setting up libgraphite2-3:ppc64el (1.3.14-1) ... Setting up libwayland-server0:ppc64el (1.18.0-2~exp1.1) ... Setting up libx11-xcb1:ppc64el (2:1.6.12-1) ... Setting up libxau6:ppc64el (1:1.0.9-0ubuntu1) ... Setting up libdouble-conversion3:ppc64el (3.1.5-6.1) ... Setting up libpsl5:ppc64el (0.21.0-1.1ubuntu1) ... Setting up libboost1.74-dev:ppc64el (1.74.0-3ubuntu1) ... Setting up libboost-atomic1.74.0:ppc64el (1.74.0-3ubuntu1) ... Setting up bsdextrautils (2.36.1-1ubuntu2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:ppc64el (67.1-5) ... Setting up libjs-popper.js (1.16.1+ds-2) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:ppc64el (2.66.3-2) ... No schema files found: doing nothing. Setting up libboost-iostreams1.74.0:ppc64el (1.74.0-3ubuntu1) ... Setting up libglvnd0:ppc64el (1.3.2-1) ... Setting up libboost-program-options1.74.0:ppc64el (1.74.0-3ubuntu1) ... Setting up libdebhelper-perl (13.3ubuntu1) ... Setting up libbrotli1:ppc64el (1.0.9-2build2) ... Setting up libboost-chrono1.74-dev:ppc64el (1.74.0-3ubuntu1) ... Setting up x11-common (1:7.7+19ubuntu15) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libsensors-config (1:3.6.0-2ubuntu1) ... Setting up libnghttp2-14:ppc64el (1.42.0-1) ... Setting up libmagic1:ppc64el (1:5.39-3) ... Setting up libdeflate0:ppc64el (1.6-1) ... Setting up fonts-freefont-ttf (20120503-10) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up xkb-data (2.29-2) ... Setting up libboost-filesystem1.74.0:ppc64el (1.74.0-3ubuntu1) ... Setting up file (1:5.39-3) ... Setting up libpthread-stubs0-dev:ppc64el (0.4-1) ... Setting up libpcre2-16-0:ppc64el (10.35-2ubuntu1) ... Setting up libboost-program-options1.74-dev:ppc64el (1.74.0-3ubuntu1) ... Setting up libsasl2-modules-db:ppc64el (2.1.27+dfsg-2ubuntu1) ... Setting up xtrans-dev (1.4.0-1) ... Setting up autotools-dev (20180224.1) ... Setting up libuv1:ppc64el (1.40.0-1) ... Setting up qt5-qmake-bin (5.15.2+dfsg-2) ... Setting up libfreetype6:ppc64el (2.10.4+dfsg-1) ... Setting up libboost-program-options-dev:ppc64el (1.74.0.3ubuntu1) ... Setting up libjs-filesaver (2.0.2+dfsg-3) ... Setting up libx11-data (2:1.6.12-1) ... Setting up librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2build2) ... Setting up libavahi-common-data:ppc64el (0.8-3ubuntu2) ... Setting up libboost-system1.74-dev:ppc64el (1.74.0-3ubuntu1) ... Setting up libdbus-1-3:ppc64el (1.12.20-1ubuntu1) ... Setting up libsigsegv2:ppc64el (2.12-2build1) ... Setting up libboost-regex1.74.0:ppc64el (1.74.0-3ubuntu1) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up icu-devtools (67.1-5) ... Setting up pkg-config (0.29.2-1ubuntu1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up ucf (3.0043) ... Setting up libsensors5:ppc64el (1:3.6.0-2ubuntu1) ... Setting up libjpeg-turbo8:ppc64el (2.0.3-0ubuntu2) ... Setting up libglapi-mesa:ppc64el (20.2.4-1) ... Setting up libsasl2-2:ppc64el (2.1.27+dfsg-2ubuntu1) ... Setting up libssh-4:ppc64el (0.9.5-1) ... Setting up libmtdev1:ppc64el (1.1.6-1) ... Setting up libvulkan1:ppc64el (1.2.154.1-1) ... Setting up libroken18-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libjsoncpp24:ppc64el (1.9.4-3) ... Setting up libboost-atomic1.74-dev:ppc64el (1.74.0-3ubuntu1) ... Setting up liblzma-dev:ppc64el (5.2.4-1ubuntu1) ... Setting up libboost-serialization1.74.0:ppc64el (1.74.0-3ubuntu1) ... Setting up zlib1g-dev:ppc64el (1:1.2.11.dfsg-2ubuntu4) ... Setting up libxshmfence1:ppc64el (1.3-1) ... Setting up librhash0:ppc64el (1.4.0-1) ... Setting up libuchardet0:ppc64el (0.0.7-1) ... Setting up libmd4c0:ppc64el (0.4.6-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libharfbuzz0b:ppc64el (2.6.7-1ubuntu1) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up sgml-base (1.30) ... Setting up cmake-data (3.18.4-1ubuntu3) ... Setting up libboost-dev:ppc64el (1.74.0.3ubuntu1) ... Setting up libjs-bootstrap4 (4.5.2+dfsg1-1) ... Setting up libboost-filesystem1.74-dev:ppc64el (1.74.0-3ubuntu1) ... Setting up libboost-date-time1.74.0:ppc64el (1.74.0-3ubuntu1) ... Setting up libbsd0:ppc64el (0.10.0-1) ... Setting up libdeflate-dev:ppc64el (1.6-1) ... Setting up libdrm-common (2.4.103-2) ... Setting up mailcap (3.67ubuntu1) ... Setting up libelf1:ppc64el (0.182-1) ... Setting up libevdev2:ppc64el (1.10.0+dfsg-1) ... Setting up libicu-dev:ppc64el (67.1-5) ... Setting up libxml2:ppc64el (2.9.10+dfsg-6.3build1) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-2) ... Setting up libboost-filesystem-dev:ppc64el (1.74.0.3ubuntu1) ... Setting up libgudev-1.0-0:ppc64el (1:234-1) ... Setting up qtchooser (66-2build1) ... Setting up node-jquery (3.5.1+dfsg+~3.5.4-3) ... Setting up libpython3.9-stdlib:ppc64el (3.9.1-1) ... Setting up libpython3-stdlib:ppc64el (3.9.0-3ubuntu1) ... Setting up libheimbase1-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libboost-thread1.74.0:ppc64el (1.74.0-3ubuntu1) ... Setting up libwacom-common (1.6-1) ... Setting up libxkbcommon0:ppc64el (1.0.3-2) ... Setting up libwayland-client0:ppc64el (1.18.0-2~exp1.1) ... Setting up libjpeg8:ppc64el (8c-2ubuntu8) ... Setting up x11proto-dev (2020.1-1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libice6:ppc64el (2:1.0.10-1) ... Setting up libxdmcp6:ppc64el (1:1.1.3-0ubuntu1) ... Setting up libvulkan-dev:ppc64el (1.2.154.1-1) ... Setting up libxcb1:ppc64el (1.14-2) ... Setting up libxcb-xfixes0:ppc64el (1.14-2) ... Setting up mime-support (3.66) ... Setting up libxau-dev:ppc64el (1:1.0.9-0ubuntu1) ... Setting up qt5-qmake:ppc64el (5.15.2+dfsg-2) ... Setting up libxcb-xinput0:ppc64el (1.14-2) ... Setting up libtool (2.4.6-14) ... Setting up libarchive13:ppc64el (3.4.3-2) ... Setting up libxcb-render0:ppc64el (1.14-2) ... Setting up libboost-chrono-dev:ppc64el (1.74.0.3ubuntu1) ... Setting up fontconfig-config (2.13.1-4.2ubuntu2) ... Setting up libxcb-glx0:ppc64el (1.14-2) ... Setting up libasn1-8-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libedit2:ppc64el (3.1-20191231-1) ... Setting up libboost-system-dev:ppc64el (1.74.0.3ubuntu1) ... Setting up libxcb-keysyms1:ppc64el (0.4.0-1build1) ... Setting up libxcb-shape0:ppc64el (1.14-2) ... Setting up libavahi-common3:ppc64el (0.8-3ubuntu2) ... Setting up m4 (1.4.18-4) ... Setting up libxcb-render-util0:ppc64el (0.3.9-1build1) ... Setting up libxcb-shm0:ppc64el (1.14-2) ... Setting up libxcb-icccm4:ppc64el (0.4.1-1.1) ... Setting up libhcrypto4-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libxcb-util1:ppc64el (0.4.0-1) ... Setting up libxcb-xkb1:ppc64el (1.14-2) ... Setting up libxcb-image0:ppc64el (0.4.0-1build1) ... Setting up libxcb-present0:ppc64el (1.14-2) ... Setting up libxdmcp-dev:ppc64el (1:1.1.3-0ubuntu1) ... Setting up libwind0-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libxcb-xinerama0:ppc64el (1.14-2) ... Setting up libllvm11:ppc64el (1:11.0.1~+rc1-1~exp1) ... Setting up libxcb-sync1:ppc64el (1.14-2) ... Setting up x11proto-core-dev (2020.1-1) ... Setting up shared-mime-info (2.0-1) ... Setting up libxkbcommon-x11-0:ppc64el (1.0.3-2) ... Setting up libcroco3:ppc64el (0.6.13-1) ... Setting up libqt5core5a:ppc64el (5.15.2+dfsg-2) ... Setting up autoconf (2.69-11.1) ... Setting up libboost-serialization1.74-dev:ppc64el (1.74.0-3ubuntu1) ... Setting up libxcb-dri2-0:ppc64el (1.14-2) ... Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up x11proto-xext-dev (2020.1-1) ... Setting up libdrm2:ppc64el (2.4.103-2) ... Setting up dwz (0.13+20201015-2) ... Setting up libboost-regex1.74-dev:ppc64el (1.74.0-3ubuntu1) ... Setting up groff-base (1.22.4-5) ... Setting up libqt5dbus5:ppc64el (5.15.2+dfsg-2) ... Setting up libxcb-randr0:ppc64el (1.14-2) ... Setting up xml-core (0.18+nmu1) ... Setting up libx11-6:ppc64el (2:1.6.12-1) ... Setting up libfontconfig1:ppc64el (2.13.1-4.2ubuntu2) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.4-3) ... Setting up libqt5test5:ppc64el (5.15.2+dfsg-2) ... Setting up libpwizlite3:ppc64el (3.0.3-1build1) ... Setting up libwacom2:ppc64el (1.6-1) ... Setting up libsm6:ppc64el (2:1.2.3-1) ... Setting up libqt5concurrent5:ppc64el (5.15.2+dfsg-2) ... Setting up libavahi-client3:ppc64el (0.8-3ubuntu2) ... Setting up python3.9 (3.9.1-1) ... Setting up libdrm-amdgpu1:ppc64el (2.4.103-2) ... Setting up automake (1:1.16.3-1ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxcb-dri3-0:ppc64el (1.14-2) ... Setting up fontconfig (2.13.1-4.2ubuntu2) ... Regenerating fonts cache... done. Setting up libdrm-nouveau2:ppc64el (2.4.103-2) ... Setting up gettext (0.19.8.1-10build1) ... Setting up libxdamage1:ppc64el (1:1.1.5-2) ... Setting up libxcb1-dev:ppc64el (1.14-2) ... Setting up libxrender1:ppc64el (1:0.9.10-1) ... Setting up libgbm1:ppc64el (20.2.4-1) ... Setting up libdrm-radeon1:ppc64el (2.4.103-2) ... Setting up libhx509-5-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libgl1-mesa-dri:ppc64el (20.2.4-1) ... Setting up libx11-dev:ppc64el (2:1.6.12-1) ... Setting up libxext6:ppc64el (2:1.3.4-0ubuntu1) ... Setting up python3 (3.9.0-3ubuntu1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libqt5network5:ppc64el (5.15.2+dfsg-2) ... Setting up libxxf86vm1:ppc64el (1:1.1.4-1build1) ... Setting up libinput-bin (1.16.4-1ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libqt5sql5:ppc64el (5.15.2+dfsg-2) ... Setting up libboost-iostreams1.74-dev:ppc64el (1.74.0-3ubuntu1) ... Setting up libboost-date-time1.74-dev:ppc64el (1.74.0-3ubuntu1) ... Setting up qtbase5-dev-tools (5.15.2+dfsg-2) ... Setting up python3-roman (2.0.0-5) ... Setting up libqt5xml5:ppc64el (5.15.2+dfsg-2) ... Setting up libegl-mesa0:ppc64el (20.2.4-1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-7) ... Setting up libpwizlite-dev:ppc64el (3.0.3-1build1) ... Setting up libxfixes3:ppc64el (1:5.0.3-2) ... Setting up libxext-dev:ppc64el (2:1.3.4-0ubuntu1) ... Setting up libcups2:ppc64el (2.3.3-3ubuntu1) ... Setting up libegl1:ppc64el (1.3.2-1) ... Setting up libboost-thread1.74-dev:ppc64el (1.74.0-3ubuntu1) ... Setting up libboost-thread-dev:ppc64el (1.74.0.3ubuntu1) ... Setting up libkrb5-26-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libinput10:ppc64el (1.16.4-1ubuntu1) ... Setting up libglx-mesa0:ppc64el (20.2.4-1) ... Setting up libglx0:ppc64el (1.3.2-1) ... Setting up po-debconf (1.0.21) ... Setting up libboost-iostreams-dev:ppc64el (1.74.0.3ubuntu1) ... Setting up libheimntlm0-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libgl1:ppc64el (1.3.2-1) ... Setting up libgssapi3-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libglx-dev:ppc64el (1.3.2-1) ... Setting up libglu1-mesa:ppc64el (9.0.1-1build1) ... Setting up libgl-dev:ppc64el (1.3.2-1) ... Setting up libegl-dev:ppc64el (1.3.2-1) ... Setting up libqt5gui5:ppc64el (5.15.2+dfsg-2) ... Setting up libldap-2.4-2:ppc64el (2.4.53+dfsg-1ubuntu5) ... Setting up libcurl3-gnutls:ppc64el (7.72.0-1ubuntu1) ... Setting up libqt5widgets5:ppc64el (5.15.2+dfsg-2) ... Setting up libcurl4-gnutls-dev:ppc64el (7.72.0-1ubuntu1) ... Setting up libqt5printsupport5:ppc64el (5.15.2+dfsg-2) ... Setting up libglu1-mesa-dev:ppc64el (9.0.1-1build1) ... Setting up qtbase5-dev:ppc64el (5.15.2+dfsg-2) ... Setting up libcurl4:ppc64el (7.72.0-1ubuntu1) ... Setting up libhts3:ppc64el (1.11-2) ... Setting up libxerces-c3.2:ppc64el (3.2.3+debian-2) ... Setting up libhts-dev:ppc64el (1.11-2) ... Setting up libxerces-c-dev:ppc64el (3.2.3+debian-2) ... Setting up cmake (3.18.4-1ubuntu3) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13.3ubuntu1) ... Processing triggers for libc-bin (2.32-0ubuntu5) ... Processing triggers for sgml-base (1.30) ... Setting up docutils-common (0.16+dfsg-3) ... Processing triggers for sgml-base (1.30) ... Setting up python3-docutils (0.16+dfsg-3) ... update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up sbuild-build-depends-toppic-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-128-generic ppc64el (ppc64le) Toolchain package versions: binutils_2.35.50.20201210-0ubuntu2 dpkg-dev_1.20.5ubuntu3 g++-10_10.2.1-1ubuntu1 gcc-10_10.2.1-1ubuntu1 libc6-dev_2.32-0ubuntu5 libstdc++-10-dev_10.2.1-1ubuntu1 libstdc++6_10.2.1-1ubuntu1 linux-libc-dev_5.8.0-32.34+21.04.1 Package versions: adduser_3.118ubuntu4 advancecomp_2.1-2.1build1 apt_2.1.13 autoconf_2.69-11.1 automake_1:1.16.3-1ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu16 base-passwd_3.5.48 bash_5.1-1ubuntu1 binutils_2.35.50.20201210-0ubuntu2 binutils-common_2.35.50.20201210-0ubuntu2 binutils-powerpc64le-linux-gnu_2.35.50.20201210-0ubuntu2 bsdextrautils_2.36.1-1ubuntu2 bsdutils_1:2.36.1-1ubuntu2 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 ca-certificates_20200601 cmake_3.18.4-1ubuntu3 cmake-data_3.18.4-1ubuntu3 coreutils_8.32-4ubuntu2 cpp_4:10.2.0-1ubuntu1 cpp-10_10.2.1-1ubuntu1 dash_0.5.11+git20200708+dd9ef66+really0.5.10.2-0ubuntu1 debconf_1.5.74 debhelper_13.3ubuntu1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3ubuntu1 docutils-common_0.16+dfsg-3 dpkg_1.20.5ubuntu3 dpkg-dev_1.20.5ubuntu3 dwz_0.13+20201015-2 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.7.0-1ubuntu2 fontconfig_2.13.1-4.2ubuntu2 fontconfig-config_2.13.1-4.2ubuntu2 fonts-dejavu-core_2.37-2 fonts-font-awesome_5.0.10+really4.7.0~dfsg-2 fonts-freefont-ttf_20120503-10 g++_4:10.2.0-1ubuntu1 g++-10_10.2.1-1ubuntu1 gcc_4:10.2.0-1ubuntu1 gcc-10_10.2.1-1ubuntu1 gcc-10-base_10.2.1-1ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 hostname_3.23 icu-devtools_67.1-5 init_1.59 init-system-helpers_1.59 intltool-debian_0.35.0+20060710.5 javascript-common_11 libacl1_2.2.53-8 libapparmor1_3.0.0-0ubuntu5 libapt-pkg6.0_2.1.13 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libargon2-1_0~20171227-0.2build20.10.0 libasan6_10.2.1-1ubuntu1 libasn1-8-heimdal_7.7.0+dfsg-2 libassuan0_2.5.3-7.1 libatomic1_10.2.1-1ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3ubuntu3 libaudit1_1:2.8.5-3ubuntu3 libavahi-client3_0.8-3ubuntu2 libavahi-common-data_0.8-3ubuntu2 libavahi-common3_0.8-3ubuntu2 libbinutils_2.35.50.20201210-0ubuntu2 libblkid1_2.36.1-1ubuntu2 libboost-atomic1.74-dev_1.74.0-3ubuntu1 libboost-atomic1.74.0_1.74.0-3ubuntu1 libboost-chrono-dev_1.74.0.3ubuntu1 libboost-chrono1.74-dev_1.74.0-3ubuntu1 libboost-chrono1.74.0_1.74.0-3ubuntu1 libboost-date-time1.74-dev_1.74.0-3ubuntu1 libboost-date-time1.74.0_1.74.0-3ubuntu1 libboost-dev_1.74.0.3ubuntu1 libboost-filesystem-dev_1.74.0.3ubuntu1 libboost-filesystem1.74-dev_1.74.0-3ubuntu1 libboost-filesystem1.74.0_1.74.0-3ubuntu1 libboost-iostreams-dev_1.74.0.3ubuntu1 libboost-iostreams1.74-dev_1.74.0-3ubuntu1 libboost-iostreams1.74.0_1.74.0-3ubuntu1 libboost-program-options-dev_1.74.0.3ubuntu1 libboost-program-options1.74-dev_1.74.0-3ubuntu1 libboost-program-options1.74.0_1.74.0-3ubuntu1 libboost-regex1.74-dev_1.74.0-3ubuntu1 libboost-regex1.74.0_1.74.0-3ubuntu1 libboost-serialization1.74-dev_1.74.0-3ubuntu1 libboost-serialization1.74.0_1.74.0-3ubuntu1 libboost-system-dev_1.74.0.3ubuntu1 libboost-system1.74-dev_1.74.0-3ubuntu1 libboost-system1.74.0_1.74.0-3ubuntu1 libboost-thread-dev_1.74.0.3ubuntu1 libboost-thread1.74-dev_1.74.0-3ubuntu1 libboost-thread1.74.0_1.74.0-3ubuntu1 libboost1.74-dev_1.74.0-3ubuntu1 libbrotli1_1.0.9-2build2 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-4ubuntu2 libc-bin_2.32-0ubuntu5 libc-dev-bin_2.32-0ubuntu5 libc6_2.32-0ubuntu5 libc6-dev_2.32-0ubuntu5 libcap-ng0_0.7.9-2.2build1 libcap2_1:2.44-1 libcc1-0_10.2.1-1ubuntu1 libcom-err2_1.45.6-1ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1ubuntu1 libcrypt1_1:4.4.17-1ubuntu1 libcryptsetup12_2:2.3.4-1ubuntu1 libctf-nobfd0_2.35.50.20201210-0ubuntu2 libctf0_2.35.50.20201210-0ubuntu2 libcups2_2.3.3-3ubuntu1 libcurl3-gnutls_7.72.0-1ubuntu1 libcurl4_7.72.0-1ubuntu1 libcurl4-gnutls-dev_7.72.0-1ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu3 libdbus-1-3_1.12.20-1ubuntu1 libdebconfclient0_0.255ubuntu1 libdebhelper-perl_13.3ubuntu1 libdeflate-dev_1.6-1 libdeflate0_1.6-1 libdevmapper1.02.1_2:1.02.167-1ubuntu4 libdouble-conversion3_3.1.5-6.1 libdpkg-perl_1.20.5ubuntu3 libdrm-amdgpu1_2.4.103-2 libdrm-common_2.4.103-2 libdrm-nouveau2_2.4.103-2 libdrm-radeon1_2.4.103-2 libdrm2_2.4.103-2 libedit2_3.1-20191231-1 libegl-dev_1.3.2-1 libegl-mesa0_20.2.4-1 libegl1_1.3.2-1 libelf1_0.182-1 libevdev2_1.10.0+dfsg-1 libexpat1_2.2.10-1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.25.3-1.1 libffi8ubuntu1_3.4~20200819gead65ca871-0ubuntu3 libfile-stripnondeterminism-perl_1.9.0-1 libfontconfig1_2.13.1-4.2ubuntu2 libfreetype6_2.10.4+dfsg-1 libgbm1_20.2.4-1 libgcc-10-dev_10.2.1-1ubuntu1 libgcc-s1_10.2.1-1ubuntu1 libgcrypt20_1.8.7-2ubuntu1 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgl-dev_1.3.2-1 libgl1_1.3.2-1 libgl1-mesa-dri_20.2.4-1 libglapi-mesa_20.2.4-1 libglib2.0-0_2.66.3-2 libglu1-mesa_9.0.1-1build1 libglu1-mesa-dev_9.0.1-1build1 libglvnd0_1.3.2-1 libglx-dev_1.3.2-1 libglx-mesa0_20.2.4-1 libglx0_1.3.2-1 libgmp10_2:6.2.0+dfsg-6ubuntu1 libgnutls30_3.6.15-4ubuntu2 libgomp1_10.2.1-1ubuntu1 libgpg-error0_1.38-2 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.17-10ubuntu1 libgssapi3-heimdal_7.7.0+dfsg-2 libgudev-1.0-0_1:234-1 libharfbuzz0b_2.6.7-1ubuntu1 libhcrypto4-heimdal_7.7.0+dfsg-2 libheimbase1-heimdal_7.7.0+dfsg-2 libheimntlm0-heimdal_7.7.0+dfsg-2 libhogweed6_3.6-2 libhts-dev_1.11-2 libhts3_1.11-2 libhx509-5-heimdal_7.7.0+dfsg-2 libice6_2:1.0.10-1 libicu-dev_67.1-5 libicu67_67.1-5 libidn2-0_2.3.0-4 libinput-bin_1.16.4-1ubuntu1 libinput10_1.16.4-1ubuntu1 libip4tc2_1.8.5-3ubuntu4 libisl22_0.22.1-1 libisl23_0.23-1 libitm1_10.2.1-1ubuntu1 libjpeg-turbo8_2.0.3-0ubuntu2 libjpeg8_8c-2ubuntu8 libjs-bootstrap4_4.5.2+dfsg1-1 libjs-filesaver_2.0.2+dfsg-3 libjs-jquery_3.5.1+dfsg+~3.5.4-3 libjs-jquery-ui_1.12.1+dfsg-7 libjs-popper.js_1.16.1+ds-2 libjson-c5_0.15-1 libjsoncpp24_1.9.4-3 libk5crypto3_1.17-10ubuntu1 libkeyutils1_1.6.1-2ubuntu1 libkmod2_27+20200310-2ubuntu1 libkrb5-26-heimdal_7.7.0+dfsg-2 libkrb5-3_1.17-10ubuntu1 libkrb5support0_1.17-10ubuntu1 libldap-2.4-2_2.4.53+dfsg-1ubuntu5 libllvm11_1:11.0.1~+rc1-1~exp1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10.2.1-1ubuntu1 liblz4-1_1.9.3-0ubuntu1 liblzma-dev_5.2.4-1ubuntu1 liblzma5_5.2.4-1ubuntu1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmd4c0_0.4.6-1 libmount1_2.36.1-1ubuntu2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmtdev1_1.1.6-1 libncurses6_6.2+20201114-1 libncursesw6_6.2+20201114-1 libnettle8_3.6-2 libnghttp2-14_1.42.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-0ubuntu3 libnsl2_1.3.0-0ubuntu3 libnss-nis_3.1-0ubuntu4 libnss-nisplus_1.3-0ubuntu4 libp11-kit0_0.23.22-1 libpam-modules_1.3.1-5ubuntu6 libpam-modules-bin_1.3.1-5ubuntu6 libpam-runtime_1.3.1-5ubuntu6 libpam0g_1.3.1-5ubuntu6 libpcre2-16-0_10.35-2ubuntu1 libpcre2-8-0_10.35-2ubuntu1 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libpng16-16_1.6.37-3 libprocps8_2:3.3.16-5ubuntu2 libpsl5_0.21.0-1.1ubuntu1 libpthread-stubs0-dev_0.4-1 libpwizlite-dev_3.0.3-1build1 libpwizlite3_3.0.3-1build1 libpython3-stdlib_3.9.0-3ubuntu1 libpython3.9-minimal_3.9.1-1 libpython3.9-stdlib_3.9.1-1 libqt5concurrent5_5.15.2+dfsg-2 libqt5core5a_5.15.2+dfsg-2 libqt5dbus5_5.15.2+dfsg-2 libqt5gui5_5.15.2+dfsg-2 libqt5network5_5.15.2+dfsg-2 libqt5printsupport5_5.15.2+dfsg-2 libqt5sql5_5.15.2+dfsg-2 libqt5test5_5.15.2+dfsg-2 libqt5widgets5_5.15.2+dfsg-2 libqt5xml5_5.15.2+dfsg-2 libquadmath0_10.2.1-1ubuntu1 libreadline8_8.1-1 librhash0_1.4.0-1 libroken18-heimdal_7.7.0+dfsg-2 librtmp1_2.4+20151223.gitfa8646d.1-2build2 libsasl2-2_2.1.27+dfsg-2ubuntu1 libsasl2-modules-db_2.1.27+dfsg-2ubuntu1 libseccomp2_2.4.3-1ubuntu6 libselinux1_3.1-2build2 libsemanage-common_3.1-1build2 libsemanage1_3.1-1build2 libsensors-config_1:3.6.0-2ubuntu1 libsensors5_1:3.6.0-2ubuntu1 libsepol1_3.1-1 libsigsegv2_2.12-2build1 libsm6_2:1.2.3-1 libsmartcols1_2.36.1-1ubuntu2 libsqlite3-0_3.34.0-1 libss2_1.45.6-1ubuntu1 libssh-4_0.9.5-1 libssl1.1_1.1.1f-1ubuntu5 libstdc++-10-dev_10.2.1-1ubuntu1 libstdc++6_10.2.1-1ubuntu1 libsub-override-perl_0.09-2 libsystemd0_246.6-5ubuntu1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libtsan0_10.2.1-1ubuntu1 libubsan1_10.2.1-1ubuntu1 libuchardet0_0.0.7-1 libudev1_246.6-5ubuntu1 libunistring2_0.9.10-4 libuuid1_2.36.1-1ubuntu2 libuv1_1.40.0-1 libvulkan-dev_1.2.154.1-1 libvulkan1_1.2.154.1-1 libwacom-common_1.6-1 libwacom2_1.6-1 libwayland-client0_1.18.0-2~exp1.1 libwayland-server0_1.18.0-2~exp1.1 libwind0-heimdal_7.7.0+dfsg-2 libx11-6_2:1.6.12-1 libx11-data_2:1.6.12-1 libx11-dev_2:1.6.12-1 libx11-xcb1_2:1.6.12-1 libxau-dev_1:1.0.9-0ubuntu1 libxau6_1:1.0.9-0ubuntu1 libxcb-dri2-0_1.14-2 libxcb-dri3-0_1.14-2 libxcb-glx0_1.14-2 libxcb-icccm4_0.4.1-1.1 libxcb-image0_0.4.0-1build1 libxcb-keysyms1_0.4.0-1build1 libxcb-present0_1.14-2 libxcb-randr0_1.14-2 libxcb-render-util0_0.3.9-1build1 libxcb-render0_1.14-2 libxcb-shape0_1.14-2 libxcb-shm0_1.14-2 libxcb-sync1_1.14-2 libxcb-util1_0.4.0-1 libxcb-xfixes0_1.14-2 libxcb-xinerama0_1.14-2 libxcb-xinput0_1.14-2 libxcb-xkb1_1.14-2 libxcb1_1.14-2 libxcb1-dev_1.14-2 libxdamage1_1:1.1.5-2 libxdmcp-dev_1:1.1.3-0ubuntu1 libxdmcp6_1:1.1.3-0ubuntu1 libxerces-c-dev_3.2.3+debian-2 libxerces-c3.2_3.2.3+debian-2 libxext-dev_2:1.3.4-0ubuntu1 libxext6_2:1.3.4-0ubuntu1 libxfixes3_1:5.0.3-2 libxkbcommon-x11-0_1.0.3-2 libxkbcommon0_1.0.3-2 libxml2_2.9.10+dfsg-6.3build1 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxxf86vm1_1:1.1.4-1build1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.8.0-32.34+21.04.1 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu7 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 mailcap_3.67ubuntu1 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 media-types_1.0.1ubuntu1 mime-support_3.66 mount_2.36.1-1ubuntu2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 node-jquery_3.5.1+dfsg+~3.5.4-3 openssl_1.1.1f-1ubuntu5 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu7 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.30_5.30.3-4 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4build1 pkg-config_0.29.2-1ubuntu1 pkgbinarymangler_146 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu2 python3_3.9.0-3ubuntu1 python3-docutils_0.16+dfsg-3 python3-minimal_3.9.0-3ubuntu1 python3-roman_2.0.0-5 python3.9_3.9.1-1 python3.9-minimal_3.9.1-1 qt5-qmake_5.15.2+dfsg-2 qt5-qmake-bin_5.15.2+dfsg-2 qtbase5-dev_5.15.2+dfsg-2 qtbase5-dev-tools_5.15.2+dfsg-2 qtchooser_66-2build1 readline-common_8.1-1 rpcsvc-proto_1.4.2-0ubuntu4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-toppic-dummy_0.invalid.0 sed_4.7-1ubuntu1 sensible-utils_0.0.13 sgml-base_1.30 shared-mime-info_2.0-1 systemd_246.6-5ubuntu1 systemd-sysv_246.6-5ubuntu1 systemd-timesyncd_246.6-5ubuntu1 sysvinit-utils_2.96-5ubuntu1 tar_1.32+dfsg-1 tzdata_2020d-1ubuntu1 ubuntu-keyring_2020.06.17.1 ucf_3.0043 util-linux_2.36.1-1ubuntu2 x11-common_1:7.7+19ubuntu15 x11proto-core-dev_2020.1-1 x11proto-dev_2020.1-1 x11proto-xext-dev_2020.1-1 xkb-data_2.29-2 xml-core_0.18+nmu1 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.4.0-1 xz-utils_5.2.4-1ubuntu1 zlib1g_1:1.2.11.dfsg-2ubuntu4 zlib1g-dev_1:1.2.11.dfsg-2ubuntu4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sat Dec 12 12:21:08 2020 UTC gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./toppic_1.3.0+dfsg1-4build1.dsc dpkg-source: info: extracting toppic in /<>/toppic-1.3.0+dfsg1 dpkg-source: info: unpacking toppic_1.3.0+dfsg1.orig.tar.xz dpkg-source: info: unpacking toppic_1.3.0+dfsg1-4build1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-Fix-download-of-JavaScript-related-problems.patch dpkg-source: info: applying 0002-Use-the-CMake-build-system-to-configure-the-DATADIR-.patch dpkg-source: info: applying 0004-Fix-the-erroneous-bin-install-directory.patch dpkg-source: info: applying 0004-Ensure-the-GUI-variants-are-installed-and-shipped.patch dpkg-source: info: applying 0005-Patch-to-use-libpwizlite-and-libhts-from-the-system.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-20404003 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-20404003 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-20404003 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package toppic dpkg-buildpackage: info: source version 1.3.0+dfsg1-4build1 dpkg-buildpackage: info: source distribution hirsute dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el fakeroot debian/rules clean dh clean --buildsystem=cmake debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/toppic-1.3.0+dfsg1' rm -f debian/topfd.1 rm -f debian/toppic.1 rm -f debian/topmg.1 rm -f debian/topdiff.1 dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/toppic.substvars debian/toppic-common.substvars debian/files rm -fr -- debian/toppic/ debian/tmp/ debian/toppic-common/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) make[1]: Leaving directory '/<>/toppic-1.3.0+dfsg1' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/toppic.substvars debian/toppic-common.substvars debian/files rm -fr -- debian/toppic/ debian/tmp/ debian/toppic-common/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch --buildsystem=cmake dh_update_autotools_config -a -O--buildsystem=cmake dh_autoreconf -a -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/toppic-1.3.0+dfsg1' rst2man debian/topfd.1.rst > debian/topfd.1 rst2man debian/toppic.1.rst > debian/toppic.1 rst2man debian/topmg.1.rst > debian/topmg.1 rst2man debian/topdiff.1.rst > debian/topdiff.1 dh_auto_configure -- \ -DCMAKE_INSTALL_PREFIX="/usr" \ -DCMAKE_BUILD_TYPE=release install -d obj-powerpc64le-linux-gnu cd obj-powerpc64le-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/powerpc64le-linux-gnu -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=release .. -- The C compiler identification is GNU 10.2.1 -- The CXX compiler identification is GNU 10.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- system name Linux -- PwizLite_INCLUDE_DIRS: /usr/include/pwizlite -- PwizLite_LIBRARIES: /usr/lib/powerpc64le-linux-gnu/libpwizlite.so.3.0.3 -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2") -- Checking for one of the modules 'htslib;libhts' -- HtsLib_INCLUDE_DIRS: -- HtsLib_LIBRARY: -- cmake cxx flags -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu make[1]: Leaving directory '/<>/toppic-1.3.0+dfsg1' dh_auto_build -a -O--buildsystem=cmake cd obj-powerpc64le-linux-gnu && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' /usr/bin/cmake -S/<>/toppic-1.3.0+dfsg1 -B/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topfd_autogen.dir/build.make CMakeFiles/topfd_autogen.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_autogen.dir/DependInfo.cmake --color= make -f CMakeFiles/topdiff_autogen.dir/build.make CMakeFiles/topdiff_autogen.dir/depend make -f CMakeFiles/topfd_gui_autogen.dir/build.make CMakeFiles/topfd_gui_autogen.dir/depend make -f CMakeFiles/toppic_autogen.dir/build.make CMakeFiles/toppic_autogen.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_autogen.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_autogen.dir/DependInfo.cmake --color= Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_autogen.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_autogen.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_autogen.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_autogen.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_autogen.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_autogen.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_autogen.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_autogen.dir/depend.internal". Scanning dependencies of target topdiff_autogen Scanning dependencies of target topfd_autogen Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_autogen.dir/depend.internal". Scanning dependencies of target toppic_autogen Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/depend.internal". make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topdiff_autogen.dir/build.make CMakeFiles/topdiff_autogen.dir/build Scanning dependencies of target topfd_gui_autogen make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topfd_autogen.dir/build.make CMakeFiles/topfd_autogen.dir/build make -f CMakeFiles/toppic_autogen.dir/build.make CMakeFiles/toppic_autogen.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topfd_gui_autogen.dir/build.make CMakeFiles/topfd_gui_autogen.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 0%] Automatic MOC and UIC for target topdiff [ 0%] Automatic MOC and UIC for target toppic [ 0%] Automatic MOC and UIC for target topfd /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_autogen.dir/AutogenInfo.json release /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_autogen.dir/AutogenInfo.json release [ 0%] Automatic MOC and UIC for target topfd_gui /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_autogen.dir/AutogenInfo.json release /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topfd_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -dM -E -c /usr/share/cmake-3.18/Modules/CMakeCXXCompilerABI.cpp -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/toppic_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -dM -E -c /usr/share/cmake-3.18/Modules/CMakeCXXCompilerABI.cpp -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topfd_gui_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -dM -E -c /usr/share/cmake-3.18/Modules/CMakeCXXCompilerABI.cpp -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topdiff_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -dM -E -c /usr/share/cmake-3.18/Modules/CMakeCXXCompilerABI.cpp -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/src/common/base/activation.hpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.hpp" AutoGen: Parsing "SRC:/src/common/base/base_data.hpp" AutoGen: Parsing "SRC:/src/common/base/ion.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.hpp" AutoGen: Parsing "SRC:/src/common/base/mod.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.hpp" AutoGen: Parsing "SRC:/src/common/base/residue.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.hpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.hpp" AutoGen: Parsing "SRC:/src/common/util/file_util.hpp" AutoGen: Parsing "SRC:/src/common/util/logger.hpp" AutoGen: Parsing "SRC:/src/common/util/str_util.hpp" AutoGen: Parsing "SRC:/src/common/util/time_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.hpp" AutoGen: Parsing "SRC:/src/common/base/activation.hpp" AutoGen: Parsing "SRC:/src/console/toppic_argument.hpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.hpp" AutoGen: Parsing "SRC:/src/console/toppic_process.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.hpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_mng.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.hpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_processor.hpp" AutoGen: Parsing "SRC:/src/common/base/base_data.hpp" AutoGen: Parsing "SRC:/src/common/base/ion.hpp" AutoGen: Parsing "SRC:/src/filter/diag/mass_diag_filter.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/filter_protein.hpp" AutoGen: Parsing "SRC:/src/common/base/mod.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_factory.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_util.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.hpp" AutoGen: Parsing "SRC:/src/filter/oneptm/mass_one_ptm_filter.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.hpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_mng.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.hpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_processor.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.hpp" AutoGen: Parsing "SRC:/src/filter/zeroptm/mass_zero_ptm_filter.hpp" AutoGen: Parsing "SRC:/src/common/base/residue.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.hpp" AutoGen: Parsing "SRC:/src/filter/zeroptm/zero_ptm_filter_mng.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.hpp" AutoGen: Parsing "SRC:/src/filter/zeroptm/zero_ptm_filter_processor.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.hpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.hpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.hpp" AutoGen: Parsing "SRC:/src/common/util/file_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.hpp" AutoGen: Parsing "SRC:/src/common/util/logger.hpp" AutoGen: Parsing "SRC:/src/common/util/str_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.hpp" AutoGen: Parsing "SRC:/src/common/util/time_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.hpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.hpp" AutoGen: Parsing "SRC:/src/gui/topfd/threadtopfd.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.hpp" AutoGen: Parsing "SRC:/src/gui/topfd/topfddialog.hpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.hpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.hpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.hpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.hpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.hpp" AutoGen: Parsing "SRC:/src/common/base/activation.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.hpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.hpp" AutoGen: Parsing "SRC:/src/common/base/base_data.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.hpp" AutoGen: Parsing "SRC:/src/common/base/ion.hpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.hpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.hpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.hpp" AutoGen: Parsing "SRC:/src/common/base/mod.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.hpp" AutoGen: Parsing "SRC:/src/common/base/residue.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.hpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.hpp" AutoGen: Parsing "SRC:/src/common/base/activation.hpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.hpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.hpp" AutoGen: Parsing "SRC:/src/common/util/file_util.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.hpp" AutoGen: Parsing "SRC:/src/common/util/logger.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.hpp" AutoGen: Parsing "SRC:/src/common/util/str_util.hpp" AutoGen: Parsing "SRC:/src/common/base/base_data.hpp" AutoGen: Parsing "SRC:/src/common/util/time_util.hpp" AutoGen: Parsing "SRC:/src/common/base/ion.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.hpp" AutoGen: Parsing "SRC:/src/common/base/mod.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.hpp" AutoGen: Parsing "SRC:/src/console/topdiff_argument.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.hpp" AutoGen: Parsing "SRC:/src/console/topdiff_process.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.hpp" AutoGen: Parsing "SRC:/src/merge/feature_prsm.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm.hpp" AutoGen: Parsing "SRC:/src/merge/feature_prsm_reader.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.hpp" AutoGen: Parsing "SRC:/src/merge/feature_sample_merge.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.hpp" AutoGen: Parsing "SRC:/src/common/base/residue.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.hpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.hpp" AutoGen: Parsing "SRC:/src/common/util/file_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.hpp" AutoGen: Parsing "SRC:/src/common/util/logger.hpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.hpp" AutoGen: Parsing "SRC:/src/common/util/str_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.hpp" AutoGen: Parsing "SRC:/src/common/util/time_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.hpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.hpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.hpp" AutoGen: Parsing "SRC:/src/console/topfd_argument.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.hpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.hpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.hpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.hpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.hpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.hpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.hpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.hpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.hpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.hpp" AutoGen: Parsing "SRC:/src/prsm/extreme_value.hpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.hpp" AutoGen: Parsing "SRC:/src/prsm/mass_shift_str.hpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.hpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair.hpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.hpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.hpp" AutoGen: Parsing "SRC:/src/topfd/common/topfd_para.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm.hpp" AutoGen: Parsing "SRC:/src/topfd/common/topfd_process.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_algo.hpp" AutoGen: Parsing "SRC:/src/topfd/deconv/deconv_one_sp.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cluster.hpp" AutoGen: Parsing "SRC:/src/topfd/deconv/deconv_process.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_coverage.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/co_table.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cutoff_selector.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp_a.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_fdr.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp_b.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_form_filter.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_para.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_a.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_prob.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_b.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_reader.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_util.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_sample_merge.hpp" AutoGen: Parsing "SRC:/src/topfd/feature_detect/feature_detect.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_simple_cluster.hpp" AutoGen: Parsing "SRC:/src/topfd/feature_detect/feature_para.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_stat.hpp" AutoGen: Parsing "SRC:/src/topfd/msreader/pw_ms_reader.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str.hpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_group_reader.hpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_reader.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/topfd/spec/deconv_data.hpp" AutoGen: Parsing "SRC:/src/topfd/spec/deconv_data_util.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_top_selector.hpp" AutoGen: Parsing "SRC:/src/common/base/activation.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_util.hpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm.hpp" AutoGen: Parsing "SRC:/src/common/base/base_data.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_reader.hpp" AutoGen: Parsing "SRC:/src/common/base/ion.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/common/base/mod.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_util.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.cpp" AutoGen: Parsing "SRC:/src/seq/alter.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.cpp" AutoGen: Parsing "SRC:/src/seq/alter_type.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.cpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.cpp" AutoGen: Parsing "SRC:/src/seq/break_point.hpp" AutoGen: Parsing "SRC:/src/seq/db_block.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.cpp" AutoGen: Parsing "SRC:/src/common/base/residue.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.cpp" AutoGen: Parsing "SRC:/src/seq/local_anno.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.cpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.cpp" AutoGen: Parsing "SRC:/src/seq/residue_seq.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.cpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.cpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.hpp" AutoGen: Parsing "SRC:/src/common/util/file_util.cpp" AutoGen: Parsing "SRC:/src/common/base/activation.cpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.cpp" AutoGen: Parsing "SRC:/src/common/util/logger.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.cpp" AutoGen: Parsing "SRC:/src/common/util/str_util.cpp" AutoGen: Parsing "SRC:/src/common/base/base_data.cpp" AutoGen: Parsing "SRC:/src/common/util/time_util.cpp" AutoGen: Parsing "SRC:/src/common/base/ion.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.cpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.cpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.cpp" AutoGen: Parsing "SRC:/src/common/base/mod.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.cpp" AutoGen: Parsing "SRC:/src/console/topfd.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.cpp" AutoGen: Parsing "SRC:/src/console/topfd_argument.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.cpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.cpp" AutoGen: Parsing "SRC:/src/common/base/residue.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.cpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.cpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.cpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.cpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.cpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.hpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.cpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.hpp" AutoGen: Parsing "SRC:/src/topfd/common/topfd_para.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.hpp" AutoGen: Parsing "SRC:/src/topfd/common/topfd_process.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.hpp" AutoGen: Parsing "SRC:/src/topfd/deconv/deconv_one_sp.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.hpp" AutoGen: Parsing "SRC:/src/topfd/deconv/deconv_process.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/co_table.cpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp_a.cpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp_b.cpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex.cpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.hpp" AutoGen: Parsing "SRC:/src/topfd/common/topfd_para.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_a.cpp" AutoGen: Parsing "SRC:/src/topfd/common/topfd_process.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_b.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_util.cpp" AutoGen: Parsing "SRC:/src/topfd/deconv/deconv_one_sp.hpp" AutoGen: Parsing "SRC:/src/topfd/deconv/deconv_process.hpp" AutoGen: Parsing "SRC:/src/topfd/feature_detect/feature_detect.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/co_table.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp_a.hpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp_b.hpp" AutoGen: Parsing "SRC:/src/topfd/feature_detect/feature_para.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex.hpp" AutoGen: Parsing "SRC:/src/topfd/msreader/pw_ms_reader.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_a.hpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_group_reader.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_b.hpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_reader.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_util.hpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_writer.cpp" AutoGen: Parsing "SRC:/src/topfd/feature_detect/feature_detect.hpp" AutoGen: Parsing "SRC:/src/topfd/spec/deconv_data.cpp" AutoGen: Parsing "SRC:/src/topfd/feature_detect/feature_para.hpp" AutoGen: Parsing "SRC:/src/topfd/spec/deconv_data_util.cpp" AutoGen: Parsing "SRC:/src/topfd/msreader/pw_ms_reader.hpp" AutoMoc: Generating MOC compilation "SRC:/obj-powerpc64le-linux-gnu/topfd_autogen/mocs_compilation.cpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_group_reader.hpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_reader.hpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_writer.hpp" AutoGen: Writing the parse cache file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_autogen.dir/AutogenUsed.txt" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.hpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.hpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.hpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.hpp" AutoGen: Parsing "SRC:/src/prsm/extreme_value.hpp" AutoGen: Parsing "SRC:/src/prsm/mass_shift_str.hpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair.hpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair_util.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_algo.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_coverage.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cutoff_selector.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_fdr.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_form_filter.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_para.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_prob.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_reader.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_sample_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_simple_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_stat.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_top_selector.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_util.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_reader.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_util.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/basic_diag_pair.hpp" make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' AutoGen: Parsing "SRC:/src/topfd/spec/deconv_data.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal.hpp" AutoGen: Parsing "SRC:/src/topfd/spec/deconv_data_util.hpp" AutoGen: Parsing "SRC:/src/common/base/activation.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header.hpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header_util.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/dp_pair.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_search_processor.hpp" AutoGen: Parsing "SRC:/src/common/base/base_data.cpp" AutoGen: Parsing "SRC:/src/common/base/ion.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_slow_match.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/ps_align.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.cpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/comp_shift_low_mem.hpp" AutoGen: Parsing "SRC:/src/common/base/mod.cpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_search_processor.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.cpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_search_slow_filter.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.cpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_slow_match.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.cpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_fast_match.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.cpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_search_processor.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.cpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_slow_match.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.cpp" AutoGen: Parsing "SRC:/src/seq/alter.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.cpp" AutoGen: Parsing "SRC:/src/seq/alter_type.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.cpp" AutoGen: Parsing "SRC:/src/common/base/residue.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.cpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.cpp" AutoGen: Parsing "SRC:/src/common/util/file_util.cpp" AutoGen: Parsing "SRC:/src/common/util/logger.cpp" AutoGen: Parsing "SRC:/src/common/util/str_util.cpp" AutoGen: Parsing "SRC:/src/common/util/time_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.cpp" AutoGen: Parsing "SRC:/src/gui/topfd/threadtopfd.cpp" AutoGen: Parsing "SRC:/src/gui/topfd/topfd_gui.cpp" AutoGen: Parsing "SRC:/src/gui/topfd/topfddialog.cpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.cpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.cpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.cpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.cpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.cpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.cpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.cpp" AutoGen: Parsing "SRC:/src/topfd/common/topfd_para.cpp" AutoGen: Parsing "SRC:/src/topfd/common/topfd_process.cpp" AutoGen: Parsing "SRC:/src/topfd/deconv/deconv_one_sp.cpp" AutoGen: Parsing "SRC:/src/topfd/deconv/deconv_process.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/co_table.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp_a.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/dp_b.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_a.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_b.cpp" AutoGen: Parsing "SRC:/src/topfd/dp/vertex_util.cpp" AutoGen: Parsing "SRC:/src/topfd/feature_detect/feature_detect.cpp" AutoGen: Parsing "SRC:/src/topfd/feature_detect/feature_para.cpp" AutoGen: Parsing "SRC:/src/topfd/msreader/pw_ms_reader.cpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_group_reader.cpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_reader.cpp" AutoGen: Parsing "SRC:/src/topfd/msreader/raw_ms_writer.cpp" AutoGen: Parsing "SRC:/src/topfd/spec/deconv_data.cpp" AutoGen: Parsing "SRC:/src/topfd/spec/deconv_data_util.cpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.hpp" AutoGen: Parsing "SRC:/src/seq/break_point.hpp" AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topfd_gui_autogen/HZKSH7CGSX/moc_threadtopfd.cpp", because it doesn't exist, from "SRC:/src/gui/topfd/threadtopfd.hpp" /usr/lib/qt5/bin/moc -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include --include /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/moc_predefs.h --output-dep-file -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/HZKSH7CGSX/moc_threadtopfd.cpp /<>/toppic-1.3.0+dfsg1/src/gui/topfd/threadtopfd.hpp AutoGen: Parsing "SRC:/src/seq/db_block.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.hpp" AutoGen: Parsing "SRC:/src/seq/local_anno.hpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.hpp" AutoGen: Parsing "SRC:/src/seq/residue_seq.hpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.hpp" AutoGen: Parsing "SRC:/src/stat/local/local_processor.hpp" AutoGen: Parsing "SRC:/src/stat/local/local_util.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_prob_value.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_array.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_lookup_table.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/count_test_num.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/evalue_processor.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/tdgf_util.hpp" AutoGen: Parsing "SRC:/src/visual/anno_cleavage.hpp" AutoGen: Parsing "SRC:/src/visual/anno_file_list.hpp" AutoGen: Parsing "SRC:/src/visual/anno_mass_shift.hpp" AutoGen: Parsing "SRC:/src/visual/anno_proteoform.hpp" AutoGen: Parsing "SRC:/src/visual/anno_prsm.hpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm.hpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm_position.hpp" AutoGen: Parsing "SRC:/src/visual/anno_residue.hpp" AutoGen: Parsing "SRC:/src/visual/anno_xml_util.hpp" AutoGen: Parsing "SRC:/src/visual/json_transformer.hpp" AutoGen: Parsing "SRC:/src/visual/xml_generator.hpp" AutoGen: Parsing "SRC:/src/common/base/activation.cpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.cpp" AutoGen: Parsing "SRC:/src/common/base/base_data.cpp" AutoGen: Parsing "SRC:/src/common/base/ion.cpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.cpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/mod.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.cpp" AutoGen: Parsing "SRC:/src/common/base/residue.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.cpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.cpp" AutoGen: Parsing "SRC:/src/common/util/file_util.cpp" AutoGen: Parsing "SRC:/src/common/util/logger.cpp" AutoGen: Parsing "SRC:/src/common/util/str_util.cpp" AutoGen: Parsing "SRC:/src/common/util/time_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.cpp" AutoGen: Parsing "SRC:/src/console/toppic.cpp" AutoGen: Parsing "SRC:/src/console/toppic_argument.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.cpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.cpp" AutoGen: Parsing "SRC:/src/common/util/file_util.cpp" AutoGen: Parsing "SRC:/src/common/util/logger.cpp" AutoGen: Parsing "SRC:/src/common/util/str_util.cpp" AutoGen: Parsing "SRC:/src/common/util/time_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.cpp" AutoGen: Parsing "SRC:/src/console/topdiff.cpp" AutoGen: Parsing "SRC:/src/console/topdiff_argument.cpp" AutoGen: Parsing "SRC:/src/console/topdiff_process.cpp" AutoGen: Parsing "SRC:/src/merge/feature_prsm.cpp" AutoGen: Parsing "SRC:/src/merge/feature_prsm_reader.cpp" AutoGen: Parsing "SRC:/src/merge/feature_sample_merge.cpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.cpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.cpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.cpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.cpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.cpp" AutoGen: Parsing "SRC:/src/console/toppic_process.cpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_mng.cpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_processor.cpp" AutoGen: Parsing "SRC:/src/filter/diag/mass_diag_filter.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/filter_protein.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_factory.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_util.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/mass_one_ptm_filter.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_mng.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_processor.cpp" AutoGen: Parsing "SRC:/src/filter/zeroptm/mass_zero_ptm_filter.cpp" AutoGen: Parsing "SRC:/src/filter/zeroptm/zero_ptm_filter_mng.cpp" AutoGen: Parsing "SRC:/src/filter/zeroptm/zero_ptm_filter_processor.cpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.cpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.cpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.cpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.cpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.cpp" [ 0%] Built target topfd_autogen AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.cpp" make -f CMakeFiles/toppic_gui_autogen.dir/build.make CMakeFiles/toppic_gui_autogen.dir/depend AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.cpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.cpp" AutoGen: Parsing "SRC:/src/prsm/extreme_value.cpp" AutoGen: Parsing "SRC:/src/prsm/mass_shift_str.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair_util.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_algo.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_coverage.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cutoff_selector.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_fdr.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_form_filter.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_para.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_prob.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_reader.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_sample_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_simple_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_stat.cpp" make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_gui_autogen.dir/DependInfo.cmake --color= AutoGen: Parsing "SRC:/src/prsm/prsm_str.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_table_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_top_selector.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_util.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_set.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_util.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_reader.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_table_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.cpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.cpp" AutoGen: Parsing "SRC:/src/seq/alter.cpp" AutoGen: Parsing "SRC:/src/seq/alter_type.cpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.cpp" AutoGen: Parsing "SRC:/src/seq/break_point.cpp" AutoGen: Parsing "SRC:/src/seq/db_block.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.cpp" AutoGen: Parsing "SRC:/src/seq/local_anno.cpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.cpp" AutoGen: Parsing "SRC:/src/seq/residue_seq.cpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-powerpc64le-linux-gnu/topdiff_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_autogen.dir/ParseCache.txt" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.cpp" AutoGen: Writing the settings file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_autogen.dir/AutogenUsed.txt" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.cpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.cpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.cpp" AutoGen: Parsing "SRC:/src/prsm/extreme_value.cpp" AutoGen: Parsing "SRC:/src/prsm/mass_shift_str.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair_util.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_algo.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_coverage.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cutoff_selector.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_fdr.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_form_filter.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_para.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_prob.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_reader.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_sample_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_simple_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_stat.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str_merge.cpp" AutoGen: Parsing 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AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.cpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.cpp" Scanning dependencies of target toppic_gui_autogen AutoGen: Parsing "SRC:/src/search/oneptmsearch/basic_diag_pair.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header_util.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/dp_pair.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_search_processor.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_slow_match.cpp" make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' AutoGen: Parsing "SRC:/src/search/oneptmsearch/ps_align.cpp" make -f CMakeFiles/toppic_gui_autogen.dir/build.make CMakeFiles/toppic_gui_autogen.dir/build AutoGen: Parsing "SRC:/src/search/ptmsearch/comp_shift_low_mem.cpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_search_processor.cpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_search_slow_filter.cpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_slow_match.cpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_fast_match.cpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_search_processor.cpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_slow_match.cpp" make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' AutoGen: Parsing "SRC:/src/seq/alter.cpp" AutoGen: Parsing "SRC:/src/seq/alter_type.cpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.cpp" AutoGen: Parsing "SRC:/src/seq/break_point.cpp" AutoGen: Parsing "SRC:/src/seq/db_block.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.cpp" AutoGen: Parsing "SRC:/src/seq/local_anno.cpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.cpp" AutoGen: Parsing "SRC:/src/seq/residue_seq.cpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.cpp" AutoGen: Parsing "SRC:/src/stat/local/local_processor.cpp" AutoGen: Parsing "SRC:/src/stat/local/local_util.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_prob_value.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_array.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_lookup_table.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/count_test_num.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/evalue_processor.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/tdgf_util.cpp" AutoGen: Parsing "SRC:/src/visual/anno_cleavage.cpp" AutoGen: Parsing "SRC:/src/visual/anno_file_list.cpp" AutoGen: Parsing "SRC:/src/visual/anno_mass_shift.cpp" AutoGen: Parsing "SRC:/src/visual/anno_proteoform.cpp" AutoGen: Parsing "SRC:/src/visual/anno_prsm.cpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm.cpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm_position.cpp" AutoGen: Parsing "SRC:/src/visual/anno_residue.cpp" AutoGen: Parsing "SRC:/src/visual/anno_xml_util.cpp" AutoGen: Parsing "SRC:/src/visual/json_transformer.cpp" AutoGen: Parsing "SRC:/src/visual/xml_generator.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-powerpc64le-linux-gnu/toppic_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 0%] Built target topdiff_autogen make -f CMakeFiles/topmg_autogen.dir/build.make CMakeFiles/topmg_autogen.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_autogen.dir/DependInfo.cmake --color= [ 1%] Automatic MOC and UIC for target toppic_gui [ 1%] Built target toppic_autogen /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_gui_autogen.dir/AutogenInfo.json release make -f CMakeFiles/topdiff_gui_autogen.dir/build.make CMakeFiles/topdiff_gui_autogen.dir/depend Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_autogen.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_autogen.dir/depend.internal". 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Scanning dependencies of target topmg_autogen make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topmg_autogen.dir/build.make CMakeFiles/topmg_autogen.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/DependInfo.cmake --color= AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/toppic_gui_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -dM -E -c /usr/share/cmake-3.18/Modules/CMakeCXXCompilerABI.cpp -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include [ 1%] Automatic MOC and UIC for target topmg Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/depend.internal". 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Scanning dependencies of target topdiff_gui_autogen /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_autogen.dir/AutogenInfo.json release make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topdiff_gui_autogen.dir/build.make CMakeFiles/topdiff_gui_autogen.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' AutoGen: Parsing "SRC:/src/common/base/activation.hpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.hpp" AutoGen: Parsing "SRC:/src/common/base/base_data.hpp" AutoGen: Parsing "SRC:/src/common/base/ion.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.hpp" AutoGen: Parsing "SRC:/src/common/base/mod.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.hpp" AutoGen: Parsing 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"SRC:/src/prsm/prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_top_selector.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_util.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_reader.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_util.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/basic_diag_pair.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header_util.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/dp_pair.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_search_processor.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_slow_match.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/ps_align.hpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/comp_shift_low_mem.hpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_search_processor.hpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_search_slow_filter.hpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_slow_match.hpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_fast_match.hpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_search_processor.hpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_slow_match.hpp" AutoGen: Parsing "SRC:/src/seq/alter.hpp" AutoGen: Parsing "SRC:/src/seq/alter_type.hpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.hpp" AutoGen: Parsing "SRC:/src/seq/break_point.hpp" AutoGen: Parsing "SRC:/src/seq/db_block.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.hpp" AutoGen: Parsing "SRC:/src/seq/local_anno.hpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.hpp" AutoGen: Parsing "SRC:/src/seq/residue_seq.hpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.hpp" AutoGen: Parsing "SRC:/src/stat/local/local_processor.hpp" AutoGen: Parsing "SRC:/src/stat/local/local_util.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_prob_value.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_array.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_lookup_table.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/count_test_num.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/evalue_processor.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/tdgf_util.hpp" AutoGen: Parsing "SRC:/src/visual/anno_cleavage.hpp" AutoGen: Parsing "SRC:/src/visual/anno_file_list.hpp" AutoGen: Parsing "SRC:/src/visual/anno_mass_shift.hpp" AutoGen: Parsing "SRC:/src/visual/anno_proteoform.hpp" AutoGen: Parsing "SRC:/src/visual/anno_prsm.hpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm.hpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm_position.hpp" AutoGen: Parsing "SRC:/src/visual/anno_residue.hpp" AutoGen: Parsing "SRC:/src/visual/anno_xml_util.hpp" AutoGen: Parsing "SRC:/src/visual/json_transformer.hpp" AutoGen: Parsing "SRC:/src/visual/xml_generator.hpp" AutoGen: Parsing "SRC:/src/common/base/activation.cpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.cpp" AutoGen: Parsing "SRC:/src/common/base/base_data.cpp" AutoGen: Parsing "SRC:/src/common/base/ion.cpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.cpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/mod.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.cpp" AutoGen: Parsing "SRC:/src/common/base/residue.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.cpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.cpp" AutoGen: Parsing "SRC:/src/common/util/file_util.cpp" AutoGen: Parsing "SRC:/src/common/util/logger.cpp" AutoGen: Parsing "SRC:/src/common/util/str_util.cpp" AutoGen: Parsing "SRC:/src/common/util/time_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.cpp" AutoGen: Parsing "SRC:/src/console/toppic_argument.cpp" AutoGen: Parsing "SRC:/src/console/toppic_process.cpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_mng.cpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_processor.cpp" AutoGen: Parsing "SRC:/src/filter/diag/mass_diag_filter.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/filter_protein.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_factory.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_util.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/mass_one_ptm_filter.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_mng.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_processor.cpp" AutoGen: Parsing "SRC:/src/filter/zeroptm/mass_zero_ptm_filter.cpp" AutoGen: Parsing "SRC:/src/filter/zeroptm/zero_ptm_filter_mng.cpp" AutoGen: Parsing "SRC:/src/filter/zeroptm/zero_ptm_filter_processor.cpp" AutoGen: Parsing "SRC:/src/gui/toppic/threadtoppic.cpp" AutoGen: Parsing "SRC:/src/gui/toppic/toppic_gui.cpp" AutoGen: Parsing "SRC:/src/gui/toppic/toppicwindow.cpp" [ 1%] Automatic MOC and UIC for target topdiff_gui AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topmg_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -dM -E -c /usr/share/cmake-3.18/Modules/CMakeCXXCompilerABI.cpp -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/AutogenInfo.json release AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.cpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.cpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.cpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.cpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.cpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.cpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.cpp" AutoGen: Parsing "SRC:/src/prsm/extreme_value.cpp" AutoGen: Parsing "SRC:/src/prsm/mass_shift_str.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair_util.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_algo.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_coverage.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cutoff_selector.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_fdr.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_form_filter.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_para.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_prob.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_reader.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_sample_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_simple_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_stat.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_table_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_top_selector.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_util.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_set.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_util.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_reader.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_table_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_util.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.cpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/basic_diag_pair.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header_util.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/dp_pair.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_search_processor.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_slow_match.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/ps_align.cpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/comp_shift_low_mem.cpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_search_processor.cpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_search_slow_filter.cpp" AutoGen: Parsing "SRC:/src/search/ptmsearch/ptm_slow_match.cpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_fast_match.cpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_search_processor.cpp" AutoGen: Parsing "SRC:/src/search/zeroptmsearch/zero_ptm_slow_match.cpp" AutoGen: Parsing "SRC:/src/seq/alter.cpp" AutoGen: Parsing "SRC:/src/seq/alter_type.cpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.cpp" AutoGen: Parsing "SRC:/src/seq/break_point.cpp" AutoGen: Parsing "SRC:/src/seq/db_block.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.cpp" AutoGen: Parsing "SRC:/src/seq/local_anno.cpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.cpp" AutoGen: Parsing "SRC:/src/seq/residue_seq.cpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.cpp" AutoGen: Parsing "SRC:/src/stat/local/local_processor.cpp" AutoGen: Parsing "SRC:/src/stat/local/local_util.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_prob_value.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_array.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_lookup_table.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/count_test_num.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/evalue_processor.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/tdgf_util.cpp" AutoGen: Parsing "SRC:/src/visual/anno_cleavage.cpp" AutoGen: Parsing "SRC:/src/visual/anno_file_list.cpp" AutoGen: Parsing "SRC:/src/visual/anno_mass_shift.cpp" AutoGen: Parsing "SRC:/src/visual/anno_proteoform.cpp" AutoGen: Parsing "SRC:/src/visual/anno_prsm.cpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm.cpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm_position.cpp" AutoGen: Parsing "SRC:/src/visual/anno_residue.cpp" AutoGen: Parsing "SRC:/src/visual/anno_xml_util.cpp" AutoGen: Parsing "SRC:/src/visual/json_transformer.cpp" AutoGen: Parsing "SRC:/src/visual/xml_generator.cpp" AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/toppic_gui_autogen/23BTPJIYMA/moc_threadtoppic.cpp", because it doesn't exist, from "SRC:/src/gui/toppic/threadtoppic.h" /usr/lib/qt5/bin/moc -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include --include /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/moc_predefs.h --output-dep-file -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/23BTPJIYMA/moc_threadtoppic.cpp /<>/toppic-1.3.0+dfsg1/src/gui/toppic/threadtoppic.h AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -dM -E -c /usr/share/cmake-3.18/Modules/CMakeCXXCompilerABI.cpp -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/src/common/base/activation.hpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.hpp" AutoGen: Parsing "SRC:/src/common/base/base_data.hpp" AutoGen: Parsing "SRC:/src/common/base/ion.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.hpp" AutoGen: Parsing "SRC:/src/common/base/mod.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.hpp" AutoGen: Parsing "SRC:/src/common/base/residue.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.hpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.hpp" AutoGen: Parsing "SRC:/src/common/util/file_util.hpp" AutoGen: Parsing "SRC:/src/common/util/logger.hpp" AutoGen: Parsing "SRC:/src/common/util/str_util.hpp" AutoGen: Parsing "SRC:/src/common/util/time_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.hpp" AutoGen: Parsing "SRC:/src/console/topmg_argument.hpp" AutoGen: Parsing "SRC:/src/console/topmg_process.hpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_mng.hpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_processor.hpp" AutoGen: Parsing "SRC:/src/filter/diag/mass_diag_filter.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/filter_protein.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_factory.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_util.hpp" AutoGen: Parsing "SRC:/src/filter/oneptm/mass_one_ptm_filter.hpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_mng.hpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_processor.hpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.hpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.hpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.hpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.hpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.hpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.hpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.hpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.hpp" AutoGen: Parsing "SRC:/src/prsm/extreme_value.hpp" AutoGen: Parsing "SRC:/src/prsm/mass_shift_str.hpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair.hpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair_util.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_algo.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_coverage.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cutoff_selector.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_fdr.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_form_filter.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_para.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_prob.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_reader.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_sample_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_simple_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_stat.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_top_selector.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_util.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_reader.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_util.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.hpp" AutoGen: Parsing "SRC:/src/search/graph/dist.hpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_anno.hpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_graph.hpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_graph_reader.hpp" AutoGen: Parsing "SRC:/src/search/graph/spec_graph.hpp" AutoGen: Parsing "SRC:/src/search/graph/spec_graph_reader.hpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_align.hpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_align_processor.hpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_dp_node.hpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_post_processor.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/basic_diag_pair.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header_util.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/dp_pair.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_search_processor.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_slow_match.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/ps_align.hpp" AutoGen: Parsing "SRC:/src/seq/alter.hpp" AutoGen: Parsing "SRC:/src/seq/alter_type.hpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.hpp" AutoGen: Parsing "SRC:/src/seq/break_point.hpp" AutoGen: Parsing "SRC:/src/seq/db_block.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.hpp" AutoGen: Parsing "SRC:/src/seq/local_anno.hpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.hpp" AutoGen: Parsing "SRC:/src/seq/residue_seq.hpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.hpp" AutoGen: Parsing "SRC:/src/stat/mcmc/comp_pvalue_mcmc.hpp" AutoGen: Parsing "SRC:/src/stat/mcmc/mcmc_dpr_processor.hpp" AutoGen: Parsing "SRC:/src/stat/mcmc/mcmc_mass_table_util.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_prob_value.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_array.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_lookup_table.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/count_test_num.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/evalue_processor.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/tdgf_util.hpp" AutoGen: Parsing "SRC:/src/visual/anno_cleavage.hpp" AutoGen: Parsing "SRC:/src/visual/anno_file_list.hpp" AutoGen: Parsing "SRC:/src/visual/anno_mass_shift.hpp" AutoGen: Parsing "SRC:/src/visual/anno_proteoform.hpp" AutoGen: Parsing "SRC:/src/visual/anno_prsm.hpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm.hpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm_position.hpp" AutoGen: Parsing "SRC:/src/visual/anno_residue.hpp" AutoGen: Parsing "SRC:/src/visual/anno_xml_util.hpp" AutoGen: Parsing "SRC:/src/visual/json_transformer.hpp" AutoGen: Parsing "SRC:/src/visual/xml_generator.hpp" AutoGen: Parsing "SRC:/src/common/base/activation.cpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.cpp" AutoGen: Parsing "SRC:/src/common/base/base_data.cpp" AutoGen: Parsing "SRC:/src/common/base/ion.cpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.cpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/mod.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.cpp" AutoGen: Parsing "SRC:/src/common/base/residue.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.cpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.cpp" AutoGen: Parsing "SRC:/src/common/util/file_util.cpp" AutoGen: Parsing "SRC:/src/common/util/logger.cpp" AutoGen: Parsing "SRC:/src/common/util/str_util.cpp" AutoGen: Parsing "SRC:/src/common/util/time_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.cpp" AutoGen: Parsing "SRC:/src/console/topmg.cpp" AutoGen: Parsing "SRC:/src/console/topmg_argument.cpp" AutoGen: Parsing "SRC:/src/console/topmg_process.cpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_mng.cpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_processor.cpp" AutoGen: Parsing "SRC:/src/filter/diag/mass_diag_filter.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/filter_protein.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_factory.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_util.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/mass_one_ptm_filter.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_mng.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_processor.cpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.cpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.cpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.cpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.cpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.cpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.cpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.cpp" AutoGen: Parsing "SRC:/src/prsm/extreme_value.cpp" AutoGen: Parsing "SRC:/src/prsm/mass_shift_str.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair_util.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_algo.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_coverage.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cutoff_selector.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_fdr.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_form_filter.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_para.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_prob.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_reader.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_sample_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_simple_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_stat.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_table_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_top_selector.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_util.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_set.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_util.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_reader.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_table_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_util.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.cpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.cpp" AutoGen: Parsing "SRC:/src/search/graph/dist.cpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_anno.cpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_graph.cpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_graph_reader.cpp" AutoGen: Parsing "SRC:/src/search/graph/spec_graph.cpp" AutoGen: Parsing "SRC:/src/search/graph/spec_graph_reader.cpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_align.cpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_align_processor.cpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_dp_node.cpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_post_processor.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/basic_diag_pair.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header_util.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/dp_pair.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_search_processor.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_slow_match.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/ps_align.cpp" AutoGen: Parsing "SRC:/src/seq/alter.cpp" AutoGen: Parsing "SRC:/src/seq/alter_type.cpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.cpp" AutoGen: Parsing "SRC:/src/seq/break_point.cpp" AutoGen: Parsing "SRC:/src/seq/db_block.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.cpp" AutoGen: Parsing "SRC:/src/seq/local_anno.cpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.cpp" AutoGen: Parsing "SRC:/src/seq/residue_seq.cpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.cpp" AutoGen: Parsing "SRC:/src/stat/mcmc/comp_pvalue_mcmc.cpp" AutoGen: Parsing "SRC:/src/stat/mcmc/mcmc_dpr_processor.cpp" AutoGen: Parsing "SRC:/src/stat/mcmc/mcmc_mass_table_util.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_prob_value.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_array.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_lookup_table.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/count_test_num.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/evalue_processor.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/tdgf_util.cpp" AutoGen: Parsing "SRC:/src/visual/anno_cleavage.cpp" AutoGen: Parsing "SRC:/src/visual/anno_file_list.cpp" AutoGen: Parsing "SRC:/src/visual/anno_mass_shift.cpp" AutoGen: Parsing "SRC:/src/visual/anno_proteoform.cpp" AutoGen: Parsing "SRC:/src/visual/anno_prsm.cpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm.cpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm_position.cpp" AutoGen: Parsing "SRC:/src/visual/anno_residue.cpp" AutoGen: Parsing "SRC:/src/visual/anno_xml_util.cpp" AutoGen: Parsing "SRC:/src/visual/json_transformer.cpp" AutoGen: Parsing "SRC:/src/visual/xml_generator.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-powerpc64le-linux-gnu/topmg_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' AutoGen: Parsing "SRC:/src/common/base/activation.hpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.hpp" AutoGen: Parsing "SRC:/src/common/base/base_data.hpp" AutoGen: Parsing "SRC:/src/common/base/ion.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.hpp" AutoGen: Parsing "SRC:/src/common/base/mod.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.hpp" AutoGen: Parsing "SRC:/src/common/base/residue.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.hpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.hpp" AutoGen: Parsing "SRC:/src/common/util/file_util.hpp" AutoGen: Parsing "SRC:/src/common/util/logger.hpp" AutoGen: Parsing "SRC:/src/common/util/str_util.hpp" AutoGen: Parsing "SRC:/src/common/util/time_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.hpp" AutoGen: Parsing "SRC:/src/console/topdiff_argument.hpp" AutoGen: Parsing "SRC:/src/console/topdiff_process.hpp" AutoGen: Parsing "SRC:/src/gui/topdiff/threadtopdiff.h" AutoGen: Parsing "SRC:/src/gui/topdiff/topdiffdialog.h" AutoGen: Parsing "SRC:/src/merge/feature_prsm.hpp" AutoGen: Parsing "SRC:/src/merge/feature_prsm_reader.hpp" AutoGen: Parsing "SRC:/src/merge/feature_sample_merge.hpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.hpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.hpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.hpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.hpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.hpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.hpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.hpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.hpp" AutoGen: Parsing "SRC:/src/prsm/extreme_value.hpp" AutoGen: Parsing "SRC:/src/prsm/mass_shift_str.hpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair.hpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair_util.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_algo.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_coverage.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cutoff_selector.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_fdr.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_form_filter.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_para.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_prob.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_reader.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_sample_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_simple_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_stat.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_top_selector.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_util.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_reader.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_util.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.hpp" AutoGen: Parsing "SRC:/src/seq/alter.hpp" AutoGen: Parsing "SRC:/src/seq/alter_type.hpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.hpp" AutoGen: Parsing "SRC:/src/seq/break_point.hpp" AutoGen: Parsing "SRC:/src/seq/db_block.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.hpp" AutoGen: Parsing "SRC:/src/seq/local_anno.hpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.hpp" [ 1%] Built target topmg_autogen AutoGen: Parsing "SRC:/src/seq/residue_seq.hpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.hpp" AutoGen: Parsing "SRC:/src/common/base/activation.cpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.cpp" AutoGen: Parsing "SRC:/src/common/base/base_data.cpp" AutoGen: Parsing "SRC:/src/common/base/ion.cpp" make -f CMakeFiles/topmg_gui_autogen.dir/build.make CMakeFiles/topmg_gui_autogen.dir/depend AutoGen: Parsing "SRC:/src/common/base/ion_type.cpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/mod.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.cpp" AutoGen: Parsing "SRC:/src/common/base/residue.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.cpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.cpp" AutoGen: Parsing "SRC:/src/common/util/file_util.cpp" AutoGen: Parsing "SRC:/src/common/util/logger.cpp" AutoGen: Parsing "SRC:/src/common/util/str_util.cpp" AutoGen: Parsing "SRC:/src/common/util/time_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.cpp" AutoGen: Parsing "SRC:/src/console/topdiff_argument.cpp" AutoGen: Parsing "SRC:/src/console/topdiff_process.cpp" AutoGen: Parsing "SRC:/src/gui/topdiff/threadtopdiff.cpp" AutoGen: Parsing "SRC:/src/gui/topdiff/topdiff_gui.cpp" AutoGen: Parsing "SRC:/src/gui/topdiff/topdiffdialog.cpp" AutoGen: Parsing "SRC:/src/merge/feature_prsm.cpp" AutoGen: Parsing "SRC:/src/merge/feature_prsm_reader.cpp" AutoGen: Parsing "SRC:/src/merge/feature_sample_merge.cpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.cpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.cpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.cpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.cpp" make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/DependInfo.cmake --color= AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.cpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.cpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.cpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.cpp" AutoGen: Parsing "SRC:/src/prsm/extreme_value.cpp" AutoGen: Parsing "SRC:/src/prsm/mass_shift_str.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair_util.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_algo.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_coverage.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cutoff_selector.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_fdr.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_form_filter.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_para.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_prob.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_reader.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_sample_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_simple_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_stat.cpp" AutoMoc: Reading dependencies from "SRC:/obj-powerpc64le-linux-gnu/topfd_gui_autogen/HZKSH7CGSX/moc_threadtopfd.cpp.d" AutoGen: Parsing "SRC:/src/prsm/prsm_str.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str_merge.cpp" AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topfd_gui_autogen/HZKSH7CGSX/moc_topfddialog.cpp", because it doesn't exist, from "SRC:/src/gui/topfd/topfddialog.hpp" /usr/lib/qt5/bin/moc -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include --include /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/moc_predefs.h --output-dep-file -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/HZKSH7CGSX/moc_topfddialog.cpp /<>/toppic-1.3.0+dfsg1/src/gui/topfd/topfddialog.hpp AutoGen: Parsing "SRC:/src/prsm/prsm_table_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_top_selector.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_util.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_set.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_util.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_reader.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_table_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_util.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.cpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.cpp" AutoGen: Parsing "SRC:/src/seq/alter.cpp" AutoGen: Parsing "SRC:/src/seq/alter_type.cpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.cpp" AutoGen: Parsing "SRC:/src/seq/break_point.cpp" AutoGen: Parsing "SRC:/src/seq/db_block.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.cpp" AutoGen: Parsing "SRC:/src/seq/local_anno.cpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.cpp" AutoGen: Parsing "SRC:/src/seq/residue_seq.cpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.cpp" AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/4YKSSMFELI/moc_threadtopdiff.cpp", because it doesn't exist, from "SRC:/src/gui/topdiff/threadtopdiff.h" /usr/lib/qt5/bin/moc -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include --include /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/moc_predefs.h --output-dep-file -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/4YKSSMFELI/moc_threadtopdiff.cpp /<>/toppic-1.3.0+dfsg1/src/gui/topdiff/threadtopdiff.h Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/depend.internal". Scanning dependencies of target topmg_gui_autogen make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topmg_gui_autogen.dir/build.make CMakeFiles/topmg_gui_autogen.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 1%] Automatic MOC and UIC for target topmg_gui /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topmg_gui_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -dM -E -c /usr/share/cmake-3.18/Modules/CMakeCXXCompilerABI.cpp -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/src/common/base/activation.hpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.hpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.hpp" AutoGen: Parsing "SRC:/src/common/base/base_data.hpp" AutoGen: Parsing "SRC:/src/common/base/ion.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.hpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.hpp" AutoGen: Parsing "SRC:/src/common/base/mod.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.hpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.hpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.hpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.hpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.hpp" AutoGen: Parsing "SRC:/src/common/base/residue.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.hpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.hpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.hpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.hpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.hpp" AutoGen: Parsing "SRC:/src/common/util/file_util.hpp" AutoGen: Parsing "SRC:/src/common/util/logger.hpp" AutoGen: Parsing "SRC:/src/common/util/str_util.hpp" AutoGen: Parsing "SRC:/src/common/util/time_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.hpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.hpp" AutoGen: Parsing "SRC:/src/console/topmg_argument.hpp" AutoGen: Parsing "SRC:/src/console/topmg_process.hpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_mng.hpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_processor.hpp" AutoGen: Parsing "SRC:/src/filter/diag/mass_diag_filter.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/filter_protein.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_factory.hpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_util.hpp" AutoGen: Parsing "SRC:/src/filter/oneptm/mass_one_ptm_filter.hpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_mng.hpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_processor.hpp" AutoGen: Parsing "SRC:/src/gui/topmg/threadtopmg.h" AutoGen: Parsing "SRC:/src/gui/topmg/topmgwindow.h" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.hpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.hpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.hpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.hpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.hpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.hpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.hpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.hpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.hpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.hpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.hpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.hpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.hpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.hpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.hpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.hpp" AutoGen: Parsing "SRC:/src/prsm/extreme_value.hpp" AutoGen: Parsing "SRC:/src/prsm/mass_shift_str.hpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair.hpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair_util.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_algo.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_coverage.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cutoff_selector.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_fdr.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_feature_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_form_filter.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_para.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_prob.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_reader.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_sample_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_simple_cluster.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_stat.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_top_selector.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_util.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_reader.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str_merge.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_table_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_util.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.hpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.hpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.hpp" AutoGen: Parsing "SRC:/src/search/graph/dist.hpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_anno.hpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_graph.hpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_graph_reader.hpp" AutoGen: Parsing "SRC:/src/search/graph/spec_graph.hpp" AutoGen: Parsing "SRC:/src/search/graph/spec_graph_reader.hpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_align.hpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_align_processor.hpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_dp_node.hpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_post_processor.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/basic_diag_pair.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header_util.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/dp_pair.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_search_processor.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_slow_match.hpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/ps_align.hpp" AutoGen: Parsing "SRC:/src/seq/alter.hpp" AutoGen: Parsing "SRC:/src/seq/alter_type.hpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.hpp" AutoGen: Parsing "SRC:/src/seq/break_point.hpp" AutoGen: Parsing "SRC:/src/seq/db_block.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.hpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.hpp" AutoGen: Parsing "SRC:/src/seq/local_anno.hpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.hpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.hpp" AutoGen: Parsing "SRC:/src/seq/residue_seq.hpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.hpp" AutoGen: Parsing "SRC:/src/stat/mcmc/comp_pvalue_mcmc.hpp" AutoGen: Parsing "SRC:/src/stat/mcmc/mcmc_dpr_processor.hpp" AutoGen: Parsing "SRC:/src/stat/mcmc/mcmc_mass_table_util.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_prob_value.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_array.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_lookup_table.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/count_test_num.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/evalue_processor.hpp" AutoGen: Parsing "SRC:/src/stat/tdgf/tdgf_util.hpp" AutoGen: Parsing "SRC:/src/visual/anno_cleavage.hpp" AutoGen: Parsing "SRC:/src/visual/anno_file_list.hpp" AutoGen: Parsing "SRC:/src/visual/anno_mass_shift.hpp" AutoGen: Parsing "SRC:/src/visual/anno_proteoform.hpp" AutoGen: Parsing "SRC:/src/visual/anno_prsm.hpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm.hpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm_position.hpp" AutoGen: Parsing "SRC:/src/visual/anno_residue.hpp" AutoGen: Parsing "SRC:/src/visual/anno_xml_util.hpp" AutoGen: Parsing "SRC:/src/visual/json_transformer.hpp" AutoGen: Parsing "SRC:/src/visual/xml_generator.hpp" AutoGen: Parsing "SRC:/src/common/base/activation.cpp" AutoGen: Parsing "SRC:/src/common/base/activation_base.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid.cpp" AutoGen: Parsing "SRC:/src/common/base/amino_acid_base.cpp" AutoGen: Parsing "SRC:/src/common/base/base_data.cpp" AutoGen: Parsing "SRC:/src/common/base/ion.cpp" AutoGen: Parsing "SRC:/src/common/base/ion_type.cpp" AutoGen: Parsing "SRC:/src/common/base/ion_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/mod.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_base.cpp" AutoGen: Parsing "SRC:/src/common/base/mod_util.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss.cpp" AutoGen: Parsing "SRC:/src/common/base/neutral_loss_base.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_base.cpp" AutoGen: Parsing "SRC:/src/common/base/prot_mod_util.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_base.cpp" AutoGen: Parsing "SRC:/src/common/base/ptm_util.cpp" AutoGen: Parsing "SRC:/src/common/base/residue.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_base.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_freq.cpp" AutoGen: Parsing "SRC:/src/common/base/residue_util.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type.cpp" AutoGen: Parsing "SRC:/src/common/base/support_peak_type_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_base.cpp" AutoGen: Parsing "SRC:/src/common/base/trunc_util.cpp" AutoGen: Parsing "SRC:/src/common/thread/simple_thread_pool.cpp" AutoGen: Parsing "SRC:/src/common/util/file_util.cpp" AutoGen: Parsing "SRC:/src/common/util/logger.cpp" AutoGen: Parsing "SRC:/src/common/util/str_util.cpp" AutoGen: Parsing "SRC:/src/common/util/time_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_document.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_err_handler.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_impl.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_parser.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_dom_util.cpp" AutoGen: Parsing "SRC:/src/common/xml/xml_writer.cpp" AutoGen: Parsing "SRC:/src/console/topmg_argument.cpp" AutoGen: Parsing "SRC:/src/console/topmg_process.cpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_mng.cpp" AutoGen: Parsing "SRC:/src/filter/diag/diag_filter_processor.cpp" AutoGen: Parsing "SRC:/src/filter/diag/mass_diag_filter.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/filter_protein.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_factory.cpp" AutoGen: Parsing "SRC:/src/filter/massmatch/mass_match_util.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/mass_one_ptm_filter.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_mng.cpp" AutoGen: Parsing "SRC:/src/filter/oneptm/one_ptm_filter_processor.cpp" AutoGen: Parsing "SRC:/src/gui/topmg/threadtopmg.cpp" AutoGen: Parsing "SRC:/src/gui/topmg/topmg_gui.cpp" AutoGen: Parsing "SRC:/src/gui/topmg/topmgwindow.cpp" AutoGen: Parsing "SRC:/src/ms/env/charge_cmp.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_assign.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_base.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_detect.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_para.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_peak_pair.cpp" AutoGen: Parsing "SRC:/src/ms/env/env_rescore.cpp" AutoGen: Parsing "SRC:/src/ms/env/envelope.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_filter.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_refine.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_util.cpp" AutoGen: Parsing "SRC:/src/ms/env/match_env_writer.cpp" AutoGen: Parsing "SRC:/src/ms/env/prec_env.cpp" AutoGen: Parsing "SRC:/src/ms/env/real_env.cpp" AutoGen: Parsing "SRC:/src/ms/feature/feature_merge.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/frac_xml_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster.cpp" AutoGen: Parsing "SRC:/src/ms/feature/peak_cluster_score.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/sample_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/feature/savitzky_golay.cpp" AutoGen: Parsing "SRC:/src/ms/feature/single_charge_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_reader.cpp" AutoGen: Parsing "SRC:/src/ms/feature/spec_feature_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/base_peak_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/baseline_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_json_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/deconv_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/env_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/extend_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/ms_header.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_frac_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_reader.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_thread_merge.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/msalign_writer.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/peak_tolerance.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_ms_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/prm_peak_factory.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_group.cpp" AutoGen: Parsing "SRC:/src/ms/spec/raw_ms_util.cpp" AutoGen: Parsing "SRC:/src/ms/spec/rm_break_type.cpp" AutoGen: Parsing "SRC:/src/ms/spec/sp_para.cpp" AutoGen: Parsing "SRC:/src/ms/spec/spectrum_set.cpp" AutoGen: Parsing "SRC:/src/ms/spec/support_peak.cpp" AutoGen: Parsing "SRC:/src/ms/spec/theo_peak.cpp" AutoGen: Parsing "SRC:/src/prsm/extreme_value.cpp" AutoGen: Parsing "SRC:/src/prsm/mass_shift_str.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair.cpp" AutoGen: Parsing "SRC:/src/prsm/peak_ion_pair_util.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_algo.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_coverage.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_cutoff_selector.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_fdr.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_feature_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_form_filter.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_para.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_prob.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_reader.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_sample_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_simple_cluster.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_stat.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_str_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_table_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_top_selector.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_util.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_set.cpp" AutoGen: Parsing "SRC:/src/prsm/prsm_xml_writer_util.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_reader.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_str_merge.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_table_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_util.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_set.cpp" AutoGen: Parsing "SRC:/src/prsm/simple_prsm_xml_writer_util.cpp" AutoGen: Parsing "SRC:/src/prsm/theo_peak_util.cpp" AutoGen: Parsing "SRC:/src/search/graph/dist.cpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_anno.cpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_graph.cpp" AutoGen: Parsing "SRC:/src/search/graph/proteo_graph_reader.cpp" AutoGen: Parsing "SRC:/src/search/graph/spec_graph.cpp" AutoGen: Parsing "SRC:/src/search/graph/spec_graph_reader.cpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_align.cpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_align_processor.cpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_dp_node.cpp" AutoGen: Parsing "SRC:/src/search/graphalign/graph_post_processor.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/basic_diag_pair.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/diagonal_header_util.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/dp_pair.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_search_processor.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/one_ptm_slow_match.cpp" AutoGen: Parsing "SRC:/src/search/oneptmsearch/ps_align.cpp" AutoGen: Parsing "SRC:/src/seq/alter.cpp" AutoGen: Parsing "SRC:/src/seq/alter_type.cpp" AutoGen: Parsing "SRC:/src/seq/bp_spec.cpp" AutoGen: Parsing "SRC:/src/seq/break_point.cpp" AutoGen: Parsing "SRC:/src/seq/db_block.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_index_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_reader.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_seq.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_sub_util.cpp" AutoGen: Parsing "SRC:/src/seq/fasta_util.cpp" AutoGen: Parsing "SRC:/src/seq/local_anno.cpp" AutoGen: Parsing "SRC:/src/seq/mass_shift.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_factory.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_type.cpp" AutoGen: Parsing "SRC:/src/seq/proteoform_util.cpp" AutoGen: Parsing "SRC:/src/seq/residue_seq.cpp" AutoGen: Parsing "SRC:/src/seq/seq_segment.cpp" AutoGen: Parsing "SRC:/src/stat/mcmc/comp_pvalue_mcmc.cpp" AutoGen: Parsing "SRC:/src/stat/mcmc/mcmc_dpr_processor.cpp" AutoGen: Parsing "SRC:/src/stat/mcmc/mcmc_mass_table_util.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_prob_value.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_array.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/comp_pvalue_lookup_table.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/count_test_num.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/evalue_processor.cpp" AutoGen: Parsing "SRC:/src/stat/tdgf/tdgf_util.cpp" AutoGen: Parsing "SRC:/src/visual/anno_cleavage.cpp" AutoGen: Parsing "SRC:/src/visual/anno_file_list.cpp" AutoGen: Parsing "SRC:/src/visual/anno_mass_shift.cpp" AutoGen: Parsing "SRC:/src/visual/anno_proteoform.cpp" AutoGen: Parsing "SRC:/src/visual/anno_prsm.cpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm.cpp" AutoGen: Parsing "SRC:/src/visual/anno_ptm_position.cpp" AutoGen: Parsing "SRC:/src/visual/anno_residue.cpp" AutoGen: Parsing "SRC:/src/visual/anno_xml_util.cpp" AutoGen: Parsing "SRC:/src/visual/json_transformer.cpp" AutoGen: Parsing "SRC:/src/visual/xml_generator.cpp" AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topmg_gui_autogen/OBJ2MOUSMQ/moc_threadtopmg.cpp", because it doesn't exist, from "SRC:/src/gui/topmg/threadtopmg.h" /usr/lib/qt5/bin/moc -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include --include /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/moc_predefs.h --output-dep-file -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/OBJ2MOUSMQ/moc_threadtopmg.cpp /<>/toppic-1.3.0+dfsg1/src/gui/topmg/threadtopmg.h AutoMoc: Reading dependencies from "SRC:/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/4YKSSMFELI/moc_threadtopdiff.cpp.d" AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/4YKSSMFELI/moc_topdiffdialog.cpp", because it doesn't exist, from "SRC:/src/gui/topdiff/topdiffdialog.h" /usr/lib/qt5/bin/moc -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include --include /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/moc_predefs.h --output-dep-file -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/4YKSSMFELI/moc_topdiffdialog.cpp /<>/toppic-1.3.0+dfsg1/src/gui/topdiff/topdiffdialog.h AutoMoc: Reading dependencies from "SRC:/obj-powerpc64le-linux-gnu/topfd_gui_autogen/HZKSH7CGSX/moc_topfddialog.cpp.d" AutoUic: Generating "SRC:/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include/ui_topfddialog.h", because it doesn't exist, from "SRC:/src/gui/topfd/topfddialog.ui" /usr/lib/qt5/bin/uic -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include/ui_topfddialog.h /<>/toppic-1.3.0+dfsg1/src/gui/topfd/topfddialog.ui AutoMoc: Generating MOC compilation "SRC:/obj-powerpc64le-linux-gnu/topfd_gui_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 1%] Built target topfd_gui_autogen make -f CMakeFiles/topfd.dir/build.make CMakeFiles/topfd.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd.dir/DependInfo.cmake --color= Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd.dir/depend.internal". Scanning dependencies of target topfd make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topfd.dir/build.make CMakeFiles/topfd.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 1%] Building CXX object CMakeFiles/topfd.dir/topfd_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/topfd_autogen/mocs_compilation.cpp.o -c /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/mocs_compilation.cpp AutoMoc: Reading dependencies from "SRC:/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/4YKSSMFELI/moc_topdiffdialog.cpp.d" AutoUic: Generating "SRC:/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include/gui/topdiff/ui_topdiffdialog.h", because it doesn't exist, from "SRC:/src/gui/topdiff/topdiffdialog.ui" /usr/lib/qt5/bin/uic -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include/gui/topdiff/ui_topdiffdialog.h /<>/toppic-1.3.0+dfsg1/src/gui/topdiff/topdiffdialog.ui AutoMoc: Generating MOC compilation "SRC:/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 1%] Built target topdiff_gui_autogen make -f CMakeFiles/topdiff.dir/build.make CMakeFiles/topdiff.dir/depend [ 1%] Building CXX object CMakeFiles/topfd.dir/src/console/topfd.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/console/topfd.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topfd.cpp make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff.dir/DependInfo.cmake --color= Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff.dir/depend.internal". Scanning dependencies of target topdiff make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topdiff.dir/build.make CMakeFiles/topdiff.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 1%] Building CXX object CMakeFiles/topdiff.dir/topdiff_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/topdiff_autogen/mocs_compilation.cpp.o -c /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/mocs_compilation.cpp [ 1%] Building CXX object CMakeFiles/topdiff.dir/src/console/topdiff.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/console/topdiff.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topdiff.cpp AutoMoc: Reading dependencies from "SRC:/obj-powerpc64le-linux-gnu/toppic_gui_autogen/23BTPJIYMA/moc_threadtoppic.cpp.d" AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/toppic_gui_autogen/23BTPJIYMA/moc_toppicwindow.cpp", because it doesn't exist, from "SRC:/src/gui/toppic/toppicwindow.h" /usr/lib/qt5/bin/moc -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include --include /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/moc_predefs.h --output-dep-file -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/23BTPJIYMA/moc_toppicwindow.cpp /<>/toppic-1.3.0+dfsg1/src/gui/toppic/toppicwindow.h AutoMoc: Reading dependencies from "SRC:/obj-powerpc64le-linux-gnu/topmg_gui_autogen/OBJ2MOUSMQ/moc_threadtopmg.cpp.d" AutoMoc: Generating "SRC:/obj-powerpc64le-linux-gnu/topmg_gui_autogen/OBJ2MOUSMQ/moc_topmgwindow.cpp", because it doesn't exist, from "SRC:/src/gui/topmg/topmgwindow.h" /usr/lib/qt5/bin/moc -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -I/usr/include/c++/10 -I/usr/include/powerpc64le-linux-gnu/c++/10 -I/usr/include/c++/10/backward -I/usr/lib/gcc/powerpc64le-linux-gnu/10/include -I/usr/local/include -I/usr/include/powerpc64le-linux-gnu -I/usr/include --include /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/moc_predefs.h --output-dep-file -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/OBJ2MOUSMQ/moc_topmgwindow.cpp /<>/toppic-1.3.0+dfsg1/src/gui/topmg/topmgwindow.h [ 1%] Building CXX object CMakeFiles/topfd.dir/src/console/topfd_argument.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/console/topfd_argument.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topfd_argument.cpp [ 1%] Building CXX object CMakeFiles/topdiff.dir/src/console/topdiff_argument.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/console/topdiff_argument.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topdiff_argument.cpp AutoMoc: Reading dependencies from "SRC:/obj-powerpc64le-linux-gnu/toppic_gui_autogen/23BTPJIYMA/moc_toppicwindow.cpp.d" AutoUic: Generating "SRC:/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include/ui_toppicwindow.h", because it doesn't exist, from "SRC:/src/gui/toppic/toppicwindow.ui" /usr/lib/qt5/bin/uic -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include/ui_toppicwindow.h /<>/toppic-1.3.0+dfsg1/src/gui/toppic/toppicwindow.ui AutoMoc: Generating MOC compilation "SRC:/obj-powerpc64le-linux-gnu/toppic_gui_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_gui_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_gui_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 1%] Built target toppic_gui_autogen [ 1%] Building CXX object CMakeFiles/topdiff.dir/src/console/topdiff_process.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/console/topdiff_process.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topdiff_process.cpp AutoMoc: Reading dependencies from "SRC:/obj-powerpc64le-linux-gnu/topmg_gui_autogen/OBJ2MOUSMQ/moc_topmgwindow.cpp.d" AutoUic: Generating "SRC:/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include/ui_topmgwindow.h", because it doesn't exist, from "SRC:/src/gui/topmg/topmgwindow.ui" /usr/lib/qt5/bin/uic -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include/ui_topmgwindow.h /<>/toppic-1.3.0+dfsg1/src/gui/topmg/topmgwindow.ui AutoMoc: Generating MOC compilation "SRC:/obj-powerpc64le-linux-gnu/topmg_gui_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 1%] Built target topmg_gui_autogen make -f CMakeFiles/topfd_gui.dir/build.make CMakeFiles/topfd_gui.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 2%] Automatic RCC for src/gui/topfd/icon.qrc /usr/bin/cmake -E cmake_autorcc /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/AutoRcc_icon_HZKSH7CGSX_Info.json release AutoRcc: Generating "SRC:/obj-powerpc64le-linux-gnu/topfd_gui_autogen/HZKSH7CGSX/qrc_icon.cpp", because it doesn't exist, from "SRC:/src/gui/topfd/icon.qrc" /usr/lib/qt5/bin/rcc -name icon -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/HZKSH7CGSX/qrc_icon.cpp /<>/toppic-1.3.0+dfsg1/src/gui/topfd/icon.qrc AutoRcc: Writing settings file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/AutoRcc_icon_HZKSH7CGSX_Used.txt" cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui.dir/DependInfo.cmake --color= Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui.dir/depend.internal". Scanning dependencies of target topfd_gui make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topfd_gui.dir/build.make CMakeFiles/topfd_gui.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 2%] Building CXX object CMakeFiles/topfd_gui.dir/topfd_gui_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/topfd_gui_autogen/mocs_compilation.cpp.o -c /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/mocs_compilation.cpp [ 2%] Building CXX object CMakeFiles/topfd_gui.dir/src/gui/topfd/threadtopfd.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/gui/topfd/threadtopfd.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/topfd/threadtopfd.cpp [ 2%] Building CXX object CMakeFiles/topfd_gui.dir/src/gui/topfd/topfd_gui.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/gui/topfd/topfd_gui.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/topfd/topfd_gui.cpp In file included from /usr/include/boost/program_options/parsers.hpp:295, from /usr/include/boost/program_options.hpp:17, from /<>/toppic-1.3.0+dfsg1/src/console/topfd_argument.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/console/topfd_argument.cpp:22: /usr/include/boost/program_options/detail/parsers.hpp: In member function ‘boost::program_options::basic_parsed_options boost::program_options::basic_command_line_parser::run() [with charT = char]’: /usr/include/boost/program_options/detail/parsers.hpp:90:5: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 90 | basic_command_line_parser::run() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 2%] Building CXX object CMakeFiles/topfd_gui.dir/src/gui/topfd/topfddialog.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/gui/topfd/topfddialog.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/topfd/topfddialog.cpp /<>/toppic-1.3.0+dfsg1/src/gui/topfd/topfd_gui.cpp: In function ‘int main(int, char**)’: /<>/toppic-1.3.0+dfsg1/src/gui/topfd/topfd_gui.cpp:40:44: warning: ‘const QRect QDesktopWidget::availableGeometry(int) const’ is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 40 | QRect deskRect = desk->availableGeometry(); | ^ In file included from /usr/include/powerpc64le-linux-gnu/qt5/QtWidgets/QDesktopWidget:1, from /<>/toppic-1.3.0+dfsg1/src/gui/topfd/topfd_gui.cpp:18: /usr/include/powerpc64le-linux-gnu/qt5/QtWidgets/qdesktopwidget.h:88:67: note: declared here 88 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect availableGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/program_options/parsers.hpp:295, from /usr/include/boost/program_options.hpp:17, from /<>/toppic-1.3.0+dfsg1/src/console/topdiff_argument.hpp:24, from /<>/toppic-1.3.0+dfsg1/src/console/topdiff_argument.cpp:21: /usr/include/boost/program_options/detail/parsers.hpp: In member function ‘boost::program_options::basic_parsed_options boost::program_options::basic_command_line_parser::run() [with charT = char]’: /usr/include/boost/program_options/detail/parsers.hpp:90:5: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 90 | basic_command_line_parser::run() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make -f CMakeFiles/toppic.dir/build.make CMakeFiles/toppic.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic.dir/DependInfo.cmake --color= Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic.dir/depend.internal". Scanning dependencies of target toppic make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/toppic.dir/build.make CMakeFiles/toppic.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 2%] Building CXX object CMakeFiles/toppic.dir/toppic_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/toppic_autogen/mocs_compilation.cpp.o -c /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/mocs_compilation.cpp [ 2%] Building CXX object CMakeFiles/toppic.dir/src/console/toppic.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/console/toppic.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/toppic.cpp [ 2%] Building CXX object CMakeFiles/topfd.dir/src/topfd/common/topfd_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/common/topfd_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/common/topfd_para.cpp [ 2%] Building CXX object CMakeFiles/topfd.dir/src/topfd/common/topfd_process.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/common/topfd_process.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/common/topfd_process.cpp [ 2%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/activation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/activation.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation.cpp [ 2%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/activation_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/activation_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.cpp [ 2%] Building CXX object CMakeFiles/toppic.dir/src/console/toppic_argument.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/console/toppic_argument.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/toppic_argument.cpp [ 2%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/common/topfd_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/common/topfd_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/common/topfd_para.cpp [ 2%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/common/topfd_process.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/common/topfd_process.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/common/topfd_process.cpp [ 2%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/amino_acid.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/amino_acid.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.cpp [ 2%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/amino_acid_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/amino_acid_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.cpp [ 2%] Building CXX object CMakeFiles/topfd.dir/src/topfd/deconv/deconv_one_sp.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/deconv/deconv_one_sp.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/deconv/deconv_one_sp.cpp [ 2%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/base_data.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/base_data.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/base_data.cpp [ 2%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/ion.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/ion.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion.cpp [ 2%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/ion_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/ion_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.cpp [ 2%] Building CXX object CMakeFiles/topfd.dir/src/topfd/deconv/deconv_process.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/deconv/deconv_process.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/deconv/deconv_process.cpp [ 2%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/ion_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/ion_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type_base.cpp [ 2%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/deconv/deconv_one_sp.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/deconv/deconv_one_sp.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/deconv/deconv_one_sp.cpp [ 2%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod.cpp [ 2%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp In file included from /usr/include/boost/program_options/parsers.hpp:295, from /usr/include/boost/program_options.hpp:17, from /<>/toppic-1.3.0+dfsg1/src/console/toppic_argument.hpp:28, from /<>/toppic-1.3.0+dfsg1/src/console/toppic_argument.cpp:27: /usr/include/boost/program_options/detail/parsers.hpp: In member function ‘boost::program_options::basic_parsed_options boost::program_options::basic_command_line_parser::run() [with charT = char]’: /usr/include/boost/program_options/detail/parsers.hpp:90:5: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 90 | basic_command_line_parser::run() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 2%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/deconv/deconv_process.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/deconv/deconv_process.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/deconv/deconv_process.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ModPtr toppic::ModBase::getBaseModPtr(toppic::ResiduePtr, toppic::ResiduePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 3%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_writer.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/topfd/deconv/deconv_process.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::DeconvProcess::DeconvProcess(toppic::TopfdParaPtr, const string&, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp:24: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘std::vector > > toppic::mod_util::readModTxt(const string&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 3%] Building CXX object CMakeFiles/toppic.dir/src/console/toppic_process.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/console/toppic_process.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/toppic_process.cpp [ 3%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/neutral_loss.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/neutral_loss.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.cpp [ 3%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/neutral_loss_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/neutral_loss_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.cpp [ 3%] Building CXX object CMakeFiles/topfd.dir/src/topfd/dp/co_table.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/dp/co_table.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/co_table.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_writer.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/topfd/deconv/deconv_process.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::DeconvProcess::DeconvProcess(toppic::TopfdParaPtr, const string&, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 3%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/prot_mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/prot_mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod.cpp [ 3%] Building CXX object CMakeFiles/topfd.dir/src/topfd/dp/dp.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/dp/dp.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/dp.cpp [ 3%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/prot_mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/prot_mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_base.cpp [ 3%] Building CXX object CMakeFiles/topfd.dir/src/topfd/dp/dp_a.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/dp/dp_a.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/dp_a.cpp [ 3%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/dp/co_table.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/dp/co_table.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/co_table.cpp [ 3%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/prot_mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/prot_mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_util.cpp [ 3%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/ptm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.cpp [ 3%] Building CXX object 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-I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/dp/dp_a.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/dp_a.cpp [ 4%] Building CXX object CMakeFiles/topfd.dir/src/topfd/dp/dp_b.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/dp/dp_b.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/dp_b.cpp [ 4%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/ptm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/ptm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_util.cpp [ 4%] Building CXX object CMakeFiles/topfd.dir/src/topfd/dp/vertex.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/dp/vertex.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex.cpp [ 4%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/residue.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/residue.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue.cpp [ 4%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/dp/dp_b.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/dp/dp_b.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/dp_b.cpp [ 4%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/residue_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/residue_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex.cpp: In constructor ‘toppic::Vertex::Vertex(toppic::VertexPtr)’: /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex.cpp:32:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 32 | Vertex::Vertex(VertexPtr ptr) { | ^~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ResiduePtr toppic::ResidueBase::getBaseResiduePtr(toppic::AminoAcidPtr, toppic::PtmPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 4%] Building CXX object CMakeFiles/topfd.dir/src/topfd/dp/vertex_a.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/dp/vertex_a.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_a.cpp [ 4%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/dp/vertex.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/dp/vertex.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex.cpp [ 4%] Building CXX object CMakeFiles/toppic.dir/src/common/base/activation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/activation.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation.cpp [ 4%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/residue_freq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/residue_freq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_freq.cpp [ 4%] Building CXX object CMakeFiles/topfd.dir/src/topfd/dp/vertex_b.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/dp/vertex_b.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_b.cpp [ 4%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/residue_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/residue_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.cpp [ 4%] Building CXX object CMakeFiles/toppic.dir/src/common/base/activation_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/activation_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.cpp /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex.cpp: In constructor ‘toppic::Vertex::Vertex(toppic::VertexPtr)’: /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex.cpp:32:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 32 | Vertex::Vertex(VertexPtr ptr) { | ^~~~~~ [ 4%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/support_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/support_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.cpp [ 5%] Building CXX object CMakeFiles/toppic.dir/src/common/base/amino_acid.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/amino_acid.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.cpp /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_b.cpp: In constructor ‘toppic::VertexB::VertexB(toppic::VertexBPtr)’: /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_b.cpp:35:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 35 | VertexB::VertexB(VertexBPtr ptr) { | ^~~~~~~ [ 5%] Building CXX object CMakeFiles/topfd.dir/src/topfd/dp/vertex_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/dp/vertex_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_util.cpp [ 6%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/support_peak_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/support_peak_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.cpp [ 7%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/dp/vertex_a.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/dp/vertex_a.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_a.cpp [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/amino_acid_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/amino_acid_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.cpp [ 7%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/dp/vertex_b.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/dp/vertex_b.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_b.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/topfd/spec/deconv_data.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_util.cpp:16: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::vertex_util::addEmptyVertexA(toppic::DpParaPtr, toppic::VertexAPtrVec&, toppic::DeconvDataPtr, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 7%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/trunc.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/trunc.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc.cpp [ 7%] Building CXX object CMakeFiles/topfd.dir/src/topfd/feature_detect/feature_detect.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/feature_detect/feature_detect.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/feature_detect/feature_detect.cpp [ 7%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/trunc_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/trunc_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_base.cpp [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/base_data.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/base_data.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/base_data.cpp /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_b.cpp: In constructor ‘toppic::VertexB::VertexB(toppic::VertexBPtr)’: /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_b.cpp:35:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 35 | VertexB::VertexB(VertexBPtr ptr) { | ^~~~~~~ [ 7%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/dp/vertex_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/dp/vertex_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_util.cpp [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/ion.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/ion.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion.cpp [ 7%] Building CXX object CMakeFiles/topdiff.dir/src/common/base/trunc_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/base/trunc_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_util.cpp [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/ion_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/ion_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/topfd/spec/deconv_data.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/topfd/dp/vertex_util.cpp:16: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::vertex_util::addEmptyVertexA(toppic::DpParaPtr, toppic::VertexAPtrVec&, toppic::DeconvDataPtr, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 7%] Building CXX object CMakeFiles/topdiff.dir/src/common/thread/simple_thread_pool.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/thread/simple_thread_pool.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.cpp [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/ion_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/ion_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type_base.cpp [ 7%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/feature_detect/feature_detect.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/feature_detect/feature_detect.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/feature_detect/feature_detect.cpp [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod.cpp [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ModPtr toppic::ModBase::getBaseModPtr(toppic::ResiduePtr, toppic::ResiduePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp [ 7%] Building CXX object CMakeFiles/topdiff.dir/src/common/util/file_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/util/file_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/file_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/topfd/feature_detect/feature_detect.cpp:23: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MatchEnvPtr toppic::feature_detect::getMatchEnv(const PeakPtrVec&, int, double, int, toppic::EnvParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp:24: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘std::vector > > toppic::mod_util::readModTxt(const string&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/neutral_loss.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/neutral_loss.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/topfd/feature_detect/feature_detect.cpp:23: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MatchEnvPtr toppic::feature_detect::getMatchEnv(const PeakPtrVec&, int, double, int, toppic::EnvParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/neutral_loss_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/neutral_loss_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.cpp [ 7%] Building CXX object CMakeFiles/topdiff.dir/src/common/util/logger.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/util/logger.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/logger.cpp [ 7%] Building CXX object CMakeFiles/topdiff.dir/src/common/util/str_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/common/util/str_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/str_util.cpp [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/prot_mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/prot_mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod.cpp [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/prot_mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/prot_mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_base.cpp [ 7%] Building CXX object CMakeFiles/topfd.dir/src/topfd/feature_detect/feature_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/feature_detect/feature_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/feature_detect/feature_para.cpp [ 7%] Building CXX object CMakeFiles/toppic.dir/src/common/base/prot_mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/prot_mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_util.cpp [ 8%] Building CXX object CMakeFiles/toppic.dir/src/common/base/ptm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.cpp [ 8%] 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-fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/ptm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_util.cpp [ 8%] Building CXX object CMakeFiles/topdiff.dir/src/common/xml/xml_dom_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security 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CMakeFiles/topdiff.dir/src/seq/alter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/alter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter.cpp [ 9%] Building CXX object CMakeFiles/toppic.dir/src/common/base/residue_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/residue_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/alter_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/alter_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter_type.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ResiduePtr toppic::ResidueBase::getBaseResiduePtr(toppic::AminoAcidPtr, toppic::PtmPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 9%] Building CXX object CMakeFiles/topfd.dir/src/topfd/msreader/raw_ms_group_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/msreader/raw_ms_group_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/msreader/raw_ms_group_reader.cpp [ 9%] Building CXX object CMakeFiles/toppic.dir/src/common/base/residue_freq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/residue_freq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_freq.cpp [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/bp_spec.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/bp_spec.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp [ 9%] Building CXX object CMakeFiles/toppic.dir/src/common/base/residue_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/residue_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/break_point.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::BpSpec::initBreakPoints(const ResSeqPtr&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 9%] Building CXX object CMakeFiles/toppic.dir/src/common/base/support_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/support_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.cpp [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/break_point.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/break_point.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/break_point.cpp [ 9%] Building CXX object CMakeFiles/toppic.dir/src/common/base/support_peak_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/support_peak_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.cpp [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/db_block.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/db_block.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/db_block.cpp [ 9%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/msreader/raw_ms_group_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/msreader/raw_ms_group_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/msreader/raw_ms_group_reader.cpp [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/fasta_index_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/fasta_index_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_index_reader.cpp [ 9%] Building CXX object CMakeFiles/toppic.dir/src/common/base/trunc.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/trunc.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc.cpp [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/fasta_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/fasta_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_reader.cpp [ 9%] Building CXX object CMakeFiles/toppic.dir/src/common/base/trunc_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/trunc_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/topfd/msreader/raw_ms_group_reader.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::RawMsGroupPtr toppic::RawMsGroupReader::getNextMsGroupPtr()’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/fasta_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/fasta_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.cpp [ 9%] Building CXX object CMakeFiles/topfd.dir/src/topfd/msreader/raw_ms_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/msreader/raw_ms_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/msreader/raw_ms_reader.cpp [ 9%] Building CXX object CMakeFiles/toppic.dir/src/common/base/trunc_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/base/trunc_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_util.cpp [ 9%] Building CXX object CMakeFiles/toppic.dir/src/common/thread/simple_thread_pool.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/thread/simple_thread_pool.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.cpp [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/fasta_sub_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/fasta_sub_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.cpp [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/fasta_sub_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/fasta_sub_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/topfd/msreader/raw_ms_group_reader.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::RawMsGroupPtr toppic::RawMsGroupReader::getNextMsGroupPtr()’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::FastaSubSeqPtrVec toppic::fasta_sub_util::breakSeq(toppic::FastaSeqPtr, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/fasta_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/fasta_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp [ 9%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/msreader/raw_ms_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/msreader/raw_ms_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/msreader/raw_ms_reader.cpp /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object CMakeFiles/topfd.dir/src/topfd/msreader/raw_ms_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/msreader/raw_ms_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/msreader/raw_ms_writer.cpp [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/local_anno.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/local_anno.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/local_anno.cpp [ 9%] Building CXX object CMakeFiles/toppic.dir/src/common/util/file_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/util/file_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/file_util.cpp [ 9%] Building CXX object CMakeFiles/topdiff.dir/src/seq/mass_shift.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/mass_shift.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp In file included from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp:20: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp: In constructor ‘toppic::MassShift::MassShift(toppic::AlterPtr)’: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:38:30: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 38 | int getLeftBpPos() {return left_bp_pos_;} | ^~~~~~~~~~~~ [ 9%] Building CXX object CMakeFiles/topfd.dir/src/topfd/spec/deconv_data.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/spec/deconv_data.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/spec/deconv_data.cpp [ 10%] Building CXX object CMakeFiles/topdiff.dir/src/seq/proteoform.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/proteoform.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.cpp [ 10%] Building CXX object CMakeFiles/topfd.dir/src/topfd/spec/deconv_data_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/topfd/spec/deconv_data_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/spec/deconv_data_util.cpp [ 10%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/msreader/raw_ms_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/msreader/raw_ms_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/msreader/raw_ms_writer.cpp [ 11%] Building CXX object CMakeFiles/toppic.dir/src/common/util/logger.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/util/logger.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/logger.cpp [ 11%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/base_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets 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-I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/util/str_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/str_util.cpp [ 12%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/baseline_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/baseline_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/baseline_util.cpp [ 12%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/deconv_json_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/deconv_json_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_json_merge.cpp [ 12%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/spec/deconv_data.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX 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/<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms_util.cpp [ 12%] Building CXX object CMakeFiles/topfd_gui.dir/src/topfd/spec/deconv_data_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/topfd/spec/deconv_data_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/topfd/spec/deconv_data_util.cpp [ 12%] Building CXX object CMakeFiles/toppic.dir/src/common/util/time_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/util/time_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/time_util.cpp [ 12%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/deconv_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/deconv_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.cpp [ 12%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/base_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/base_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.cpp [ 12%] Building CXX object CMakeFiles/toppic.dir/src/common/xml/xml_dom_document.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/xml/xml_dom_document.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_document.cpp [ 12%] Building CXX object CMakeFiles/topdiff.dir/src/seq/proteoform_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/proteoform_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp [ 12%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/baseline_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/baseline_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/baseline_util.cpp [ 12%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/env_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/env_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.cpp [ 12%] Building CXX object CMakeFiles/toppic.dir/src/common/xml/xml_dom_err_handler.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/xml/xml_dom_err_handler.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_err_handler.cpp [ 12%] Building CXX object CMakeFiles/toppic.dir/src/common/xml/xml_dom_impl.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/xml/xml_dom_impl.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_impl.cpp [ 12%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/extend_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/extend_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms.cpp [ 12%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/deconv_json_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/deconv_json_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_json_merge.cpp [ 12%] Building CXX object CMakeFiles/toppic.dir/src/common/xml/xml_dom_parser.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/xml/xml_dom_parser.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_parser.cpp [ 12%] Building CXX object CMakeFiles/toppic.dir/src/common/xml/xml_dom_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/xml/xml_dom_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_util.cpp [ 12%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/extend_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/extend_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp [ 13%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/deconv_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/deconv_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ProteoformPtr toppic::proteoform_factory::geneDbProteoformPtr(toppic::FastaSeqPtr, toppic::ModPtrVec)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 13%] Building CXX object CMakeFiles/toppic.dir/src/common/xml/xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/xml/xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_writer.cpp [ 13%] Building CXX object CMakeFiles/toppic.dir/src/seq/alter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/alter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter.cpp [ 13%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/deconv_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/deconv_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ExtendMsPtrVec toppic::extend_ms_factory::geneMsThreePtrVec(const DeconvMsPtrVec&, toppic::SpParaPtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 13%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/extend_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/extend_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_peak.cpp [ 13%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/env_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/env_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.cpp [ 13%] Building CXX object CMakeFiles/toppic.dir/src/seq/alter_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/alter_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter_type.cpp [ 13%] Building CXX object CMakeFiles/topdiff.dir/src/seq/proteoform_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/proteoform_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_type.cpp [ 13%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/ms_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/ms_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp [ 13%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/extend_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/extend_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms.cpp [ 13%] Building CXX object CMakeFiles/topdiff.dir/src/seq/proteoform_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/proteoform_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp [ 13%] Building CXX object CMakeFiles/toppic.dir/src/seq/bp_spec.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/bp_spec.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp: In static member function ‘static toppic::MsHeaderPtr toppic::MsHeader::geneMsHeaderPtr(toppic::MsHeaderPtr, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp:169:13: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 169 | MsHeaderPtr MsHeader::geneMsHeaderPtr(MsHeaderPtr ori_ptr, double new_prec_mass) { | ^~~~~~~~ [ 13%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/extend_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/extend_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp [ 13%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/msalign_frac_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/msalign_frac_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_frac_merge.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/break_point.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::BpSpec::initBreakPoints(const ResSeqPtr&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 13%] Building CXX object CMakeFiles/toppic.dir/src/seq/break_point.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/break_point.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/break_point.cpp [ 13%] Building CXX object CMakeFiles/toppic.dir/src/seq/db_block.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/db_block.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/db_block.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ProteoformPtr toppic::proteoform_util::geneDbProteoformPtr(toppic::FastaSubSeqPtr, toppic::ModPtrVec, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ExtendMsPtrVec toppic::extend_ms_factory::geneMsThreePtrVec(const DeconvMsPtrVec&, toppic::SpParaPtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 13%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/msalign_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/msalign_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp [ 13%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/extend_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/extend_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_peak.cpp [ 13%] Building CXX object CMakeFiles/toppic.dir/src/seq/fasta_index_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/fasta_index_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_index_reader.cpp [ 13%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/ms_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/ms_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp [ 14%] Building CXX object CMakeFiles/toppic.dir/src/seq/fasta_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/fasta_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_reader.cpp [ 14%] Building CXX object CMakeFiles/topdiff.dir/src/seq/residue_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/residue_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/residue_seq.cpp [ 14%] Building CXX object CMakeFiles/toppic.dir/src/seq/fasta_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/fasta_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.cpp /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp: In static member function ‘static toppic::MsHeaderPtr toppic::MsHeader::geneMsHeaderPtr(toppic::MsHeaderPtr, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp:169:13: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 169 | MsHeaderPtr MsHeader::geneMsHeaderPtr(MsHeaderPtr ori_ptr, double new_prec_mass) { | ^~~~~~~~ [ 14%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_frac_merge.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘std::vector > toppic::MsAlignReader::getNextSpectrumSet(toppic::SpParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 14%] Building CXX object CMakeFiles/topdiff.dir/src/seq/seq_segment.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/seq_segment.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/seq_segment.cpp [ 14%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/base_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/base_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.cpp [ 14%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/msalign_thread_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/msalign_thread_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_thread_merge.cpp [ 14%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/baseline_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/baseline_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/baseline_util.cpp [ 14%] Building CXX object CMakeFiles/toppic.dir/src/seq/fasta_sub_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/fasta_sub_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.cpp [ 14%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp [ 14%] Building CXX object CMakeFiles/toppic.dir/src/seq/fasta_sub_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/fasta_sub_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp [ 14%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/deconv_json_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/deconv_json_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_json_merge.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::FastaSubSeqPtrVec toppic::fasta_sub_util::breakSeq(toppic::FastaSeqPtr, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 14%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/msalign_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/msalign_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_util.cpp [ 14%] Building CXX object CMakeFiles/toppic.dir/src/seq/fasta_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/fasta_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp [ 14%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/deconv_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/deconv_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms_util.cpp /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/msalign_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/msalign_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_writer.cpp [ 14%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/deconv_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/deconv_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.cpp [ 15%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.cpp [ 15%] Building CXX object CMakeFiles/toppic.dir/src/seq/local_anno.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/local_anno.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/local_anno.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘std::vector > toppic::MsAlignReader::getNextSpectrumSet(toppic::SpParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 15%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/env_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/env_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.cpp [ 15%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/peak_tolerance.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/peak_tolerance.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.cpp [ 15%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_thread_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_thread_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_thread_merge.cpp [ 15%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/extend_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/extend_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms.cpp [ 15%] Building CXX object CMakeFiles/toppic.dir/src/seq/mass_shift.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/mass_shift.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp [ 15%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/prm_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/prm_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp In file included from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp:20: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp: In constructor ‘toppic::MassShift::MassShift(toppic::AlterPtr)’: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:38:30: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 38 | int getLeftBpPos() {return left_bp_pos_;} | ^~~~~~~~~~~~ [ 15%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/extend_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/extend_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp [ 15%] Building CXX object CMakeFiles/toppic.dir/src/seq/proteoform.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/proteoform.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::PrmPeakPtrVec toppic::prm_ms::getPrmPeakPtrs(const PrmMsPtrVec&, toppic::PeakTolerancePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 15%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_util.cpp [ 15%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/prm_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/prm_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ExtendMsPtrVec toppic::extend_ms_factory::geneMsThreePtrVec(const DeconvMsPtrVec&, toppic::SpParaPtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 16%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/extend_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/extend_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_peak.cpp [ 16%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::prm_ms_factory::addSixMasses(toppic::PrmPeakPtrVec&, int, toppic::DeconvPeakPtr, double, toppic::ActivationPtr, toppic::PeakTolerancePtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 16%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/ms_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/ms_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp [ 16%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.cpp [ 16%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/peak_tolerance.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/peak_tolerance.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.cpp /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp: In static member function ‘static toppic::MsHeaderPtr toppic::MsHeader::geneMsHeaderPtr(toppic::MsHeaderPtr, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp:169:13: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 169 | MsHeaderPtr MsHeader::geneMsHeaderPtr(MsHeaderPtr ori_ptr, double new_prec_mass) { | ^~~~~~~~ [ 16%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/msalign_frac_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/msalign_frac_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_frac_merge.cpp [ 17%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/prm_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/prm_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp [ 17%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/prm_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/prm_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::PrmPeak::addNghbEdge(toppic::DeconvPeakPtr, double, toppic::SPTypePtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 17%] Building CXX object CMakeFiles/toppic.dir/src/seq/proteoform_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/proteoform_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp [ 17%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/msalign_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/msalign_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp [ 17%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/prm_peak_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/prm_peak_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::PrmPeakPtrVec toppic::prm_ms::getPrmPeakPtrs(const PrmMsPtrVec&, toppic::PeakTolerancePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 17%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/prm_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/prm_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp [ 17%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/raw_ms_group.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/raw_ms_group.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_group.cpp [ 17%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/raw_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/raw_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::prm_ms_factory::addSixMasses(toppic::PrmPeakPtrVec&, int, toppic::DeconvPeakPtr, double, toppic::ActivationPtr, toppic::PeakTolerancePtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ProteoformPtr toppic::proteoform_factory::geneDbProteoformPtr(toppic::FastaSeqPtr, toppic::ModPtrVec)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 17%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/rm_break_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/rm_break_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/rm_break_type.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘std::vector > toppic::MsAlignReader::getNextSpectrumSet(toppic::SpParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 17%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/sp_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/sp_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/sp_para.cpp [ 17%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/msalign_thread_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/msalign_thread_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_thread_merge.cpp [ 17%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/spectrum_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/spectrum_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/spectrum_set.cpp [ 17%] Building CXX object CMakeFiles/toppic.dir/src/seq/proteoform_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/proteoform_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_type.cpp [ 17%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/prm_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/prm_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp [ 17%] Building CXX object CMakeFiles/toppic.dir/src/seq/proteoform_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/proteoform_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp [ 17%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/msalign_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/msalign_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::PrmPeak::addNghbEdge(toppic::DeconvPeakPtr, double, toppic::SPTypePtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 17%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/prm_peak_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/prm_peak_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.cpp [ 17%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/support_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/support_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/support_peak.cpp [ 17%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/theo_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/theo_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/theo_peak.cpp [ 17%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/raw_ms_group.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/raw_ms_group.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_group.cpp [ 17%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/msalign_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/msalign_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_writer.cpp [ 17%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/charge_cmp.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/charge_cmp.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/charge_cmp.cpp [ 17%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/raw_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/raw_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.cpp [ 17%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/env_assign.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/env_assign.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_assign.cpp [ 17%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ProteoformPtr toppic::proteoform_util::geneDbProteoformPtr(toppic::FastaSubSeqPtr, toppic::ModPtrVec, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 17%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/peak_tolerance.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/peak_tolerance.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.cpp [ 17%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/rm_break_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/rm_break_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/rm_break_type.cpp [ 18%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/env_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/env_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp [ 18%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/prm_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/prm_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp [ 18%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/sp_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/sp_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/sp_para.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::EnvBase::EnvBase(std::string, int, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 18%] Building CXX object CMakeFiles/toppic.dir/src/seq/residue_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/residue_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/residue_seq.cpp [ 18%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/spectrum_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/spectrum_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/spectrum_set.cpp [ 18%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/env_detect.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/env_detect.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::PrmPeakPtrVec toppic::prm_ms::getPrmPeakPtrs(const PrmMsPtrVec&, toppic::PeakTolerancePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 18%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/prm_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/prm_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp [ 18%] Building CXX object CMakeFiles/toppic.dir/src/seq/seq_segment.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/seq/seq_segment.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/seq_segment.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::MatchEnvPtr toppic::EnvDetect::detectEnv(const PeakPtrVec&, int, int, double, toppic::EnvParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 18%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/base_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/base_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.cpp [ 18%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/support_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/support_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/support_peak.cpp [ 19%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/baseline_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/baseline_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/baseline_util.cpp [ 19%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_filter.cpp [ 19%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/theo_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/theo_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/theo_peak.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::prm_ms_factory::addSixMasses(toppic::PrmPeakPtrVec&, int, toppic::DeconvPeakPtr, double, toppic::ActivationPtr, toppic::PeakTolerancePtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 19%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/charge_cmp.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/charge_cmp.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/charge_cmp.cpp [ 19%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/deconv_json_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/deconv_json_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_json_merge.cpp [ 19%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/env_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/env_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp [ 19%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/env_assign.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/env_assign.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_assign.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp: In constructor ‘toppic::EnvPara::EnvPara(toppic::TopfdParaPtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp:20:1: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 20 | EnvPara::EnvPara(TopfdParaPtr topfd_para_ptr) { | ^~~~~~~ [ 19%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/env_peak_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/env_peak_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_peak_pair.cpp [ 19%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/deconv_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/deconv_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms_util.cpp [ 19%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/env_rescore.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/env_rescore.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_rescore.cpp [ 19%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/env_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/env_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp [ 19%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/deconv_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/deconv_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.cpp [ 19%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/prm_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/prm_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp [ 19%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/env_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/env_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::EnvBase::EnvBase(std::string, int, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::PrmPeak::addNghbEdge(toppic::DeconvPeakPtr, double, toppic::SPTypePtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 19%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/envelope.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/envelope.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp [ 19%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/prm_peak_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/prm_peak_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.cpp [ 20%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/env_detect.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/env_detect.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp [ 20%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/extend_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/extend_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms.cpp [ 20%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/raw_ms_group.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/raw_ms_group.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_group.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::MatchEnvPtr toppic::EnvDetect::detectEnv(const PeakPtrVec&, int, int, double, toppic::EnvParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 20%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/raw_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/raw_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp: In copy constructor ‘toppic::Envelope::Envelope(toppic::Envelope&)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp:26:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 26 | Envelope::Envelope(Envelope &env): | ^~~~~~~~ [ 20%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_filter.cpp [ 20%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/extend_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/extend_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp [ 20%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/match_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/match_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env.cpp [ 21%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/rm_break_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/rm_break_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/rm_break_type.cpp [ 21%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/match_env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/match_env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_filter.cpp [ 21%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/sp_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/sp_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/sp_para.cpp [ 21%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/env_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/env_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ExtendMsPtrVec toppic::extend_ms_factory::geneMsThreePtrVec(const DeconvMsPtrVec&, toppic::SpParaPtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 21%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/extend_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/extend_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_peak.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp: In constructor ‘toppic::EnvPara::EnvPara(toppic::TopfdParaPtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp:20:1: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 20 | EnvPara::EnvPara(TopfdParaPtr topfd_para_ptr) { | ^~~~~~~ [ 21%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/env_peak_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/env_peak_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_peak_pair.cpp [ 21%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/spectrum_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/spectrum_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/spectrum_set.cpp [ 21%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/env_rescore.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/env_rescore.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_rescore.cpp [ 21%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/ms_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/ms_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp [ 21%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/match_env_refine.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/match_env_refine.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_refine.cpp /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp: In static member function ‘static toppic::MsHeaderPtr toppic::MsHeader::geneMsHeaderPtr(toppic::MsHeaderPtr, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp:169:13: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 169 | MsHeaderPtr MsHeader::geneMsHeaderPtr(MsHeaderPtr ori_ptr, double new_prec_mass) { | ^~~~~~~~ [ 21%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/match_env_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/match_env_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp [ 21%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/envelope.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/envelope.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp [ 21%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/support_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/support_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/support_peak.cpp [ 21%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/msalign_frac_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/msalign_frac_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_frac_merge.cpp [ 21%] Building CXX object CMakeFiles/topdiff.dir/src/ms/spec/theo_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/spec/theo_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/theo_peak.cpp [ 21%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/charge_cmp.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/charge_cmp.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/charge_cmp.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp: In copy constructor ‘toppic::Envelope::Envelope(toppic::Envelope&)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp:26:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 26 | Envelope::Envelope(Envelope &env): | ^~~~~~~~ [ 21%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/env_assign.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/env_assign.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_assign.cpp [ 21%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/msalign_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/msalign_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp [ 21%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/match_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/match_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MatchEnvPtrVec toppic::match_env_util::addLowMassPeak(toppic::MatchEnvPtrVec&, toppic::PeakPtrVec&, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 21%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/env_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/env_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp [ 21%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/match_env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/match_env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_filter.cpp [ 21%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/match_env_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/match_env_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::EnvBase::EnvBase(std::string, int, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 21%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/prec_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/prec_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/prec_env.cpp [ 21%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/env_detect.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/env_detect.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp [ 21%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/match_env_refine.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/match_env_refine.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_refine.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘std::vector > toppic::MsAlignReader::getNextSpectrumSet(toppic::SpParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 21%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/msalign_thread_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/msalign_thread_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_thread_merge.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::MatchEnvPtr toppic::EnvDetect::detectEnv(const PeakPtrVec&, int, int, double, toppic::EnvParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 21%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/match_env_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/match_env_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp [ 21%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_filter.cpp [ 21%] Building CXX object CMakeFiles/topfd.dir/src/ms/env/real_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/env/real_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp [ 21%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/msalign_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/msalign_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_util.cpp [ 21%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/env_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/env_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp: In constructor ‘toppic::RealEnv::RealEnv(const PeakPtrVec&, toppic::EnvelopePtr, double, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp:25:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 25 | RealEnv::RealEnv(const PeakPtrVec &peak_list, EnvelopePtr theo_env, | ^~~~~~~ [ 22%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/feature_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/feature_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/feature_merge.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp: In constructor ‘toppic::EnvPara::EnvPara(toppic::TopfdParaPtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp:20:1: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 20 | EnvPara::EnvPara(TopfdParaPtr topfd_para_ptr) { | ^~~~~~~ [ 22%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/env_peak_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/env_peak_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_peak_pair.cpp [ 22%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/msalign_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/msalign_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_writer.cpp [ 22%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/env_rescore.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/env_rescore.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_rescore.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MatchEnvPtrVec toppic::match_env_util::addLowMassPeak(toppic::MatchEnvPtrVec&, toppic::PeakPtrVec&, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 23%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.cpp [ 23%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/match_env_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/match_env_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_writer.cpp [ 23%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/peak_tolerance.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/peak_tolerance.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.cpp [ 23%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/envelope.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/envelope.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp [ 23%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/frac_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/frac_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp [ 23%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/prm_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/prm_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp [ 23%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/prec_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/prec_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/prec_env.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::FracFeature::FracFeature(toppic::XmlDOMElement*)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp: In copy constructor ‘toppic::Envelope::Envelope(toppic::Envelope&)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp:26:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 26 | Envelope::Envelope(Envelope &env): | ^~~~~~~~ [ 23%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/frac_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/frac_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_cluster.cpp [ 24%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/match_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/match_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::PrmPeakPtrVec toppic::prm_ms::getPrmPeakPtrs(const PrmMsPtrVec&, toppic::PeakTolerancePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 24%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/prm_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/prm_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp [ 24%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/env/real_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/env/real_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp [ 24%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/match_env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/match_env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_filter.cpp [ 24%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/frac_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/frac_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_reader.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp: In constructor ‘toppic::RealEnv::RealEnv(const PeakPtrVec&, toppic::EnvelopePtr, double, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp:25:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 25 | RealEnv::RealEnv(const PeakPtrVec &peak_list, EnvelopePtr theo_env, | ^~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::prm_ms_factory::addSixMasses(toppic::PrmPeakPtrVec&, int, toppic::DeconvPeakPtr, double, toppic::ActivationPtr, toppic::PeakTolerancePtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 24%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/feature_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/feature_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/feature_merge.cpp [ 24%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/frac_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/frac_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_writer.cpp [ 24%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/match_env_refine.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/match_env_refine.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_refine.cpp [ 24%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/match_env_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/match_env_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp [ 24%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/frac_xml_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/frac_xml_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_xml_feature_reader.cpp [ 24%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/frac_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/frac_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp [ 24%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/prm_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/prm_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp [ 24%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/peak_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/peak_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::PrmPeak::addNghbEdge(toppic::DeconvPeakPtr, double, toppic::SPTypePtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::FracFeature::FracFeature(toppic::XmlDOMElement*)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 24%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/prm_peak_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/prm_peak_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.cpp [ 25%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/frac_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/frac_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_cluster.cpp [ 25%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/raw_ms_group.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/raw_ms_group.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_group.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MatchEnvPtrVec toppic::match_env_util::addLowMassPeak(toppic::MatchEnvPtrVec&, toppic::PeakPtrVec&, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 25%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/raw_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/raw_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.cpp [ 25%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/match_env_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/match_env_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_writer.cpp [ 25%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/frac_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/frac_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_reader.cpp [ 25%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/rm_break_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/rm_break_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/rm_break_type.cpp [ 25%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/prec_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/prec_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/prec_env.cpp [ 25%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/frac_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/frac_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_writer.cpp [ 25%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/sp_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/sp_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/sp_para.cpp [ 25%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/spectrum_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/spectrum_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/spectrum_set.cpp [ 25%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/frac_xml_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/frac_xml_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_xml_feature_reader.cpp [ 25%] Building CXX object CMakeFiles/topdiff.dir/src/ms/env/real_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/env/real_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp [ 25%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/support_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/support_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/support_peak.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp: In constructor ‘toppic::RealEnv::RealEnv(const PeakPtrVec&, toppic::EnvelopePtr, double, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp:25:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 25 | RealEnv::RealEnv(const PeakPtrVec &peak_list, EnvelopePtr theo_env, | ^~~~~~~ [ 25%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/peak_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/peak_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster.cpp [ 25%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/feature_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/feature_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/feature_merge.cpp [ 25%] Building CXX object CMakeFiles/toppic.dir/src/ms/spec/theo_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/spec/theo_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/theo_peak.cpp [ 25%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/charge_cmp.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/charge_cmp.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/charge_cmp.cpp [ 25%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/peak_cluster_score.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/peak_cluster_score.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster_score.cpp [ 26%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/env_assign.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/env_assign.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_assign.cpp [ 26%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/frac_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/frac_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp [ 26%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/env_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/env_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp [ 26%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/sample_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/sample_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::FracFeature::FracFeature(toppic::XmlDOMElement*)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::EnvBase::EnvBase(std::string, int, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 26%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/frac_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/frac_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_cluster.cpp [ 26%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/env_detect.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/env_detect.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp [ 26%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/sample_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/sample_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_reader.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::MatchEnvPtr toppic::EnvDetect::detectEnv(const PeakPtrVec&, int, int, double, toppic::EnvParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 26%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/sample_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/sample_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_writer.cpp [ 26%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/frac_feature_reader.cpp.o [ 26%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_filter.cpp /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/frac_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_reader.cpp [ 26%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/savitzky_golay.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/savitzky_golay.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/savitzky_golay.cpp [ 26%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/frac_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/frac_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_writer.cpp [ 26%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/env_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/env_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp: In constructor ‘toppic::EnvPara::EnvPara(toppic::TopfdParaPtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp:20:1: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 20 | EnvPara::EnvPara(TopfdParaPtr topfd_para_ptr) { | ^~~~~~~ [ 26%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/peak_cluster_score.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/peak_cluster_score.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster_score.cpp [ 26%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/env_peak_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/env_peak_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_peak_pair.cpp [ 26%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/env_rescore.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/env_rescore.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_rescore.cpp [ 26%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/frac_xml_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/frac_xml_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_xml_feature_reader.cpp [ 26%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/single_charge_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/single_charge_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/single_charge_feature.cpp [ 26%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/spec_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/spec_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp [ 26%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/envelope.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/envelope.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp [ 26%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/peak_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/peak_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster.cpp [ 26%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/sample_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/sample_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature.cpp /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp: In constructor ‘toppic::SpecFeature::SpecFeature(toppic::MsHeaderPtr, toppic::FracFeaturePtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp:63:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 63 | SpecFeature::SpecFeature(MsHeaderPtr header, FracFeaturePtr feature) { | ^~~~~~~~~~~ [ 27%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/spec_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/spec_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_reader.cpp [ 27%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/sample_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/sample_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_reader.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp: In copy constructor ‘toppic::Envelope::Envelope(toppic::Envelope&)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp:26:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 26 | Envelope::Envelope(Envelope &env): | ^~~~~~~~ [ 27%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/spec_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/spec_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_writer.cpp [ 27%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/match_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/match_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env.cpp [ 27%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/sample_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/sample_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_writer.cpp [ 27%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/match_env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/match_env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_filter.cpp [ 27%] Building CXX object CMakeFiles/topfd.dir/src/common/base/activation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/activation.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation.cpp [ 27%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/savitzky_golay.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/savitzky_golay.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/savitzky_golay.cpp [ 27%] Building CXX object CMakeFiles/topfd.dir/src/common/base/activation_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/activation_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.cpp [ 27%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/match_env_refine.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/match_env_refine.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_refine.cpp [ 27%] Building CXX object CMakeFiles/topfd.dir/src/common/base/amino_acid.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/amino_acid.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.cpp [ 27%] Building CXX object CMakeFiles/topfd.dir/src/common/base/amino_acid_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/amino_acid_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.cpp [ 27%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/match_env_util.cpp.o [ 27%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/single_charge_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/match_env_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/single_charge_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/single_charge_feature.cpp [ 27%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/spec_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/spec_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp [ 27%] Building CXX object CMakeFiles/topfd.dir/src/common/base/base_data.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/base_data.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/base_data.cpp /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp: In constructor ‘toppic::SpecFeature::SpecFeature(toppic::MsHeaderPtr, toppic::FracFeaturePtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp:63:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 63 | SpecFeature::SpecFeature(MsHeaderPtr header, FracFeaturePtr feature) { | ^~~~~~~~~~~ [ 27%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/spec_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/spec_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_reader.cpp [ 28%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/peak_cluster_score.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/peak_cluster_score.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster_score.cpp [ 28%] Building CXX object CMakeFiles/topfd.dir/src/common/base/ion.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/ion.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion.cpp [ 28%] Building CXX object CMakeFiles/topfd.dir/src/common/base/ion_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/ion_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.cpp [ 28%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/feature/spec_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/feature/spec_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MatchEnvPtrVec toppic::match_env_util::addLowMassPeak(toppic::MatchEnvPtrVec&, toppic::PeakPtrVec&, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 28%] Building CXX object CMakeFiles/topfd.dir/src/common/base/ion_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/ion_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type_base.cpp [ 28%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/match_env_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/match_env_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_writer.cpp [ 29%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/activation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/activation.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation.cpp [ 29%] Building CXX object CMakeFiles/topfd.dir/src/common/base/mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod.cpp [ 29%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/sample_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/sample_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature.cpp [ 29%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/prec_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/prec_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/prec_env.cpp [ 29%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/activation_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/activation_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.cpp [ 29%] Building CXX object CMakeFiles/topfd.dir/src/common/base/mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp [ 29%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/sample_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/sample_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_reader.cpp [ 29%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/amino_acid.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/amino_acid.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ModPtr toppic::ModBase::getBaseModPtr(toppic::ResiduePtr, toppic::ResiduePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 29%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/sample_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/sample_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_writer.cpp [ 29%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/amino_acid_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/amino_acid_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.cpp [ 29%] Building CXX object CMakeFiles/topfd.dir/src/common/base/mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp [ 30%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/real_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/env/real_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp [ 30%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/savitzky_golay.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/savitzky_golay.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/savitzky_golay.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp: In constructor ‘toppic::RealEnv::RealEnv(const PeakPtrVec&, toppic::EnvelopePtr, double, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp:25:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 25 | RealEnv::RealEnv(const PeakPtrVec &peak_list, EnvelopePtr theo_env, | ^~~~~~~ [ 30%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/feature_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/feature_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/feature_merge.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp:24: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘std::vector > > toppic::mod_util::readModTxt(const string&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 30%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/base_data.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/base_data.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/base_data.cpp [ 30%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/ion.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/ion.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion.cpp [ 30%] Building CXX object CMakeFiles/topfd.dir/src/common/base/neutral_loss.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/neutral_loss.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.cpp [ 30%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/ion_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/ion_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.cpp [ 30%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/single_charge_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/single_charge_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/single_charge_feature.cpp [ 31%] Building CXX object CMakeFiles/topfd.dir/src/common/base/neutral_loss_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/neutral_loss_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.cpp [ 31%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/ion_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/ion_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type_base.cpp [ 31%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/spec_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/spec_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp [ 31%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/frac_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/frac_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp [ 31%] Building CXX object CMakeFiles/topfd.dir/src/common/base/prot_mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/prot_mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod.cpp /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp: In constructor ‘toppic::SpecFeature::SpecFeature(toppic::MsHeaderPtr, toppic::FracFeaturePtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp:63:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 63 | SpecFeature::SpecFeature(MsHeaderPtr header, FracFeaturePtr feature) { | ^~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod.cpp [ 31%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/spec_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/spec_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_reader.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::FracFeature::FracFeature(toppic::XmlDOMElement*)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 31%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/frac_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/frac_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_cluster.cpp [ 31%] Building CXX object CMakeFiles/topfd.dir/src/common/base/prot_mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/prot_mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_base.cpp [ 31%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp [ 31%] Building CXX object CMakeFiles/topdiff.dir/src/ms/feature/spec_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/ms/feature/spec_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ModPtr toppic::ModBase::getBaseModPtr(toppic::ResiduePtr, toppic::ResiduePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 31%] Building CXX object CMakeFiles/topfd.dir/src/common/base/prot_mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/prot_mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_util.cpp [ 31%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/extreme_value.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/extreme_value.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/extreme_value.cpp [ 31%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/frac_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/frac_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_reader.cpp [ 31%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp [ 31%] Building CXX object CMakeFiles/topfd.dir/src/common/base/ptm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.cpp [ 31%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/mass_shift_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/mass_shift_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/mass_shift_str.cpp [ 31%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/peak_ion_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/peak_ion_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/peak_ion_pair.cpp [ 31%] Building CXX object CMakeFiles/topfd.dir/src/common/base/ptm_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/ptm_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.cpp [ 31%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/frac_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/frac_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp:24: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘std::vector > > toppic::mod_util::readModTxt(const string&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 31%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/peak_ion_pair_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/peak_ion_pair_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/peak_ion_pair_util.cpp [ 31%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/frac_xml_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/frac_xml_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_xml_feature_reader.cpp [ 31%] Building CXX object CMakeFiles/topfd.dir/src/common/base/ptm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/ptm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_util.cpp [ 31%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/neutral_loss.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/neutral_loss.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.cpp [ 31%] Building CXX object CMakeFiles/topfd.dir/src/common/base/residue.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/residue.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue.cpp [ 31%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/neutral_loss_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/neutral_loss_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.cpp [ 31%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/peak_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/peak_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster.cpp [ 31%] Building CXX object CMakeFiles/topfd.dir/src/common/base/residue_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/residue_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp [ 31%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/prot_mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/prot_mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod.cpp [ 31%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ResiduePtr toppic::ResidueBase::getBaseResiduePtr(toppic::AminoAcidPtr, toppic::PtmPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 32%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/prot_mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/prot_mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_base.cpp [ 32%] Building CXX object CMakeFiles/topfd.dir/src/common/base/residue_freq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/residue_freq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_freq.cpp [ 32%] Building CXX object CMakeFiles/topfd.dir/src/common/base/residue_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/residue_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.cpp [ 32%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/prot_mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/prot_mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_util.cpp /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp: In copy constructor ‘toppic::Prsm::Prsm(const toppic::Prsm&)’: /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp:51:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 51 | Prsm::Prsm(const Prsm &obj) { | ^~~~ [ 32%] Building CXX object CMakeFiles/topfd.dir/src/common/base/support_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/support_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.cpp [ 32%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/ptm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.cpp [ 32%] Building CXX object CMakeFiles/topfd.dir/src/common/base/support_peak_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/support_peak_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.cpp [ 33%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_algo.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_algo.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_algo.cpp [ 33%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/ptm_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/ptm_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.cpp [ 33%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_cluster.cpp [ 33%] Building CXX object CMakeFiles/topfd.dir/src/common/base/trunc.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/trunc.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc.cpp [ 34%] Building CXX object CMakeFiles/topfd.dir/src/common/base/trunc_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/trunc_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_base.cpp [ 34%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/ptm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/ptm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_util.cpp [ 34%] Building CXX object CMakeFiles/topfd.dir/src/common/base/trunc_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/base/trunc_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_util.cpp [ 34%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/residue.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/residue.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue.cpp [ 34%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/peak_cluster_score.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/peak_cluster_score.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster_score.cpp [ 34%] Building CXX object CMakeFiles/topfd.dir/src/common/thread/simple_thread_pool.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/thread/simple_thread_pool.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.cpp [ 34%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_coverage.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_coverage.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_coverage.cpp [ 34%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/residue_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/residue_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ResiduePtr toppic::ResidueBase::getBaseResiduePtr(toppic::AminoAcidPtr, toppic::PtmPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 34%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/sample_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/sample_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature.cpp [ 34%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/residue_freq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/residue_freq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_freq.cpp [ 34%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/residue_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/residue_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.cpp [ 34%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/sample_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/sample_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_reader.cpp [ 34%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/support_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/support_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.cpp [ 34%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/sample_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/sample_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_writer.cpp [ 34%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/support_peak_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/support_peak_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.cpp [ 34%] Building CXX object CMakeFiles/topfd.dir/src/common/util/file_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/util/file_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/file_util.cpp [ 34%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/savitzky_golay.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/savitzky_golay.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/savitzky_golay.cpp [ 34%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/trunc.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/trunc.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc.cpp [ 34%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/trunc_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui 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-I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_cutoff_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_cutoff_selector.cpp [ 34%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/base/trunc_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/base/trunc_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_util.cpp [ 34%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/single_charge_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/single_charge_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/single_charge_feature.cpp [ 35%] Building CXX object CMakeFiles/topfd.dir/src/common/util/logger.cpp.o [ 35%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/thread/simple_thread_pool.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/thread/simple_thread_pool.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.cpp /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/util/logger.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/logger.cpp [ 35%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/spec_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/spec_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp [ 35%] Building CXX object CMakeFiles/topfd.dir/src/common/util/str_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/util/str_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/str_util.cpp /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp: In constructor ‘toppic::SpecFeature::SpecFeature(toppic::MsHeaderPtr, toppic::FracFeaturePtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp:63:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 63 | SpecFeature::SpecFeature(MsHeaderPtr header, FracFeaturePtr feature) { | ^~~~~~~~~~~ [ 36%] Building CXX object CMakeFiles/toppic.dir/src/ms/feature/spec_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/spec_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_reader.cpp [ 36%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_fdr.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat 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-DNDEBUG -o CMakeFiles/toppic.dir/src/ms/feature/spec_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_writer.cpp [ 36%] Building CXX object CMakeFiles/toppic.dir/src/prsm/extreme_value.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/extreme_value.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/extreme_value.cpp [ 36%] Building CXX object CMakeFiles/topfd.dir/src/common/util/time_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/common/util/time_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/time_util.cpp [ 36%] Building CXX object 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-I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_feature_cluster.cpp [ 36%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/util/file_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 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CMakeFiles/topfd.dir/src/common/base/activation.cpp.o CMakeFiles/topfd.dir/src/common/base/activation_base.cpp.o CMakeFiles/topfd.dir/src/common/base/amino_acid.cpp.o CMakeFiles/topfd.dir/src/common/base/amino_acid_base.cpp.o CMakeFiles/topfd.dir/src/common/base/base_data.cpp.o CMakeFiles/topfd.dir/src/common/base/ion.cpp.o CMakeFiles/topfd.dir/src/common/base/ion_type.cpp.o CMakeFiles/topfd.dir/src/common/base/ion_type_base.cpp.o CMakeFiles/topfd.dir/src/common/base/mod.cpp.o CMakeFiles/topfd.dir/src/common/base/mod_base.cpp.o CMakeFiles/topfd.dir/src/common/base/mod_util.cpp.o CMakeFiles/topfd.dir/src/common/base/neutral_loss.cpp.o CMakeFiles/topfd.dir/src/common/base/neutral_loss_base.cpp.o CMakeFiles/topfd.dir/src/common/base/prot_mod.cpp.o CMakeFiles/topfd.dir/src/common/base/prot_mod_base.cpp.o CMakeFiles/topfd.dir/src/common/base/prot_mod_util.cpp.o CMakeFiles/topfd.dir/src/common/base/ptm.cpp.o CMakeFiles/topfd.dir/src/common/base/ptm_base.cpp.o CMakeFiles/topfd.dir/src/common/base/ptm_util.cpp.o CMakeFiles/topfd.dir/src/common/base/residue.cpp.o CMakeFiles/topfd.dir/src/common/base/residue_base.cpp.o CMakeFiles/topfd.dir/src/common/base/residue_freq.cpp.o CMakeFiles/topfd.dir/src/common/base/residue_util.cpp.o CMakeFiles/topfd.dir/src/common/base/support_peak_type.cpp.o CMakeFiles/topfd.dir/src/common/base/support_peak_type_base.cpp.o CMakeFiles/topfd.dir/src/common/base/trunc.cpp.o CMakeFiles/topfd.dir/src/common/base/trunc_base.cpp.o CMakeFiles/topfd.dir/src/common/base/trunc_util.cpp.o CMakeFiles/topfd.dir/src/common/thread/simple_thread_pool.cpp.o CMakeFiles/topfd.dir/src/common/util/file_util.cpp.o CMakeFiles/topfd.dir/src/common/util/logger.cpp.o CMakeFiles/topfd.dir/src/common/util/str_util.cpp.o CMakeFiles/topfd.dir/src/common/util/time_util.cpp.o CMakeFiles/topfd.dir/src/common/xml/xml_dom_document.cpp.o CMakeFiles/topfd.dir/src/common/xml/xml_dom_err_handler.cpp.o CMakeFiles/topfd.dir/src/common/xml/xml_dom_impl.cpp.o CMakeFiles/topfd.dir/src/common/xml/xml_dom_parser.cpp.o CMakeFiles/topfd.dir/src/common/xml/xml_dom_util.cpp.o CMakeFiles/topfd.dir/src/common/xml/xml_writer.cpp.o -o ../bin/topfd -lxerces-c -lboost_program_options -lboost_filesystem -lboost_system -lboost_thread -lboost_iostreams -lboost_chrono /usr/lib/powerpc64le-linux-gnu/libpwizlite.so.3.0.3 -lpthread -lz [ 36%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/util/logger.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/util/logger.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/logger.cpp [ 36%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/util/str_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/util/str_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/str_util.cpp [ 36%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp [ 36%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_para.cpp make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 36%] Built target topfd make -f CMakeFiles/toppic_gui.dir/build.make CMakeFiles/toppic_gui.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 36%] Automatic RCC for src/gui/toppic/icon.qrc /usr/bin/cmake -E cmake_autorcc /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_gui_autogen.dir/AutoRcc_icon_23BTPJIYMA_Info.json release AutoRcc: Generating "SRC:/obj-powerpc64le-linux-gnu/toppic_gui_autogen/23BTPJIYMA/qrc_icon.cpp", because it doesn't exist, from "SRC:/src/gui/toppic/icon.qrc" /usr/lib/qt5/bin/rcc -name icon -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/23BTPJIYMA/qrc_icon.cpp /<>/toppic-1.3.0+dfsg1/src/gui/toppic/icon.qrc AutoRcc: Writing settings file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_gui_autogen.dir/AutoRcc_icon_23BTPJIYMA_Used.txt" cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix 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Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_gui.dir/depend.internal". Scanning dependencies of target toppic_gui make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/toppic_gui.dir/build.make CMakeFiles/toppic_gui.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 36%] Building CXX object CMakeFiles/toppic_gui.dir/toppic_gui_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/toppic_gui_autogen/mocs_compilation.cpp.o -c /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/mocs_compilation.cpp /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp: In copy constructor ‘toppic::Prsm::Prsm(const toppic::Prsm&)’: /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp:51:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 51 | Prsm::Prsm(const Prsm &obj) { | ^~~~ [ 36%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/util/time_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/util/time_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/time_util.cpp [ 36%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_prob.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_prob.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_prob.cpp [ 36%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/xml/xml_dom_document.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/xml/xml_dom_document.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_document.cpp [ 36%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_algo.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_algo.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_algo.cpp [ 36%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/xml/xml_dom_err_handler.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/xml/xml_dom_err_handler.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_err_handler.cpp [ 36%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_cluster.cpp [ 36%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/xml/xml_dom_impl.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/common/xml/xml_dom_impl.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_impl.cpp [ 36%] Building CXX object 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-I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.cpp [ 36%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/xml/xml_dom_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 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-I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/gui/toppic/threadtoppic.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/toppic/threadtoppic.cpp [ 36%] Building CXX object CMakeFiles/topfd_gui.dir/src/common/xml/xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topfd_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext 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CMakeFiles/topfd_gui.dir/src/common/xml/xml_dom_util.cpp.o CMakeFiles/topfd_gui.dir/src/common/xml/xml_writer.cpp.o CMakeFiles/topfd_gui.dir/topfd_gui_autogen/HZKSH7CGSX/qrc_icon.cpp.o -o ../bin/topfd_gui -lQt5Widgets -lQt5Core -lQt5Gui -lxerces-c -lboost_filesystem -lboost_system -lboost_thread -lboost_iostreams -lboost_chrono /usr/lib/powerpc64le-linux-gnu/libpwizlite.so.3.0.3 -lpthread -lz [ 36%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_coverage.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_coverage.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_coverage.cpp [ 36%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_sample_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_sample_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_sample_merge.cpp [ 36%] Building CXX object CMakeFiles/toppic_gui.dir/src/gui/toppic/toppic_gui.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/gui/toppic/toppic_gui.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/toppic/toppic_gui.cpp make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 36%] Built target topfd_gui [ 36%] Building CXX object CMakeFiles/toppic_gui.dir/src/gui/toppic/toppicwindow.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/gui/toppic/toppicwindow.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/toppic/toppicwindow.cpp [ 36%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_simple_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_simple_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_simple_cluster.cpp /<>/toppic-1.3.0+dfsg1/src/gui/toppic/toppic_gui.cpp: In function ‘int main(int, char**)’: /<>/toppic-1.3.0+dfsg1/src/gui/toppic/toppic_gui.cpp:36:44: warning: ‘const QRect QDesktopWidget::availableGeometry(int) const’ is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 36 | QRect deskRect = desk->availableGeometry(); | ^ In file included from /usr/include/powerpc64le-linux-gnu/qt5/QtWidgets/QDesktopWidget:1, from /<>/toppic-1.3.0+dfsg1/src/gui/toppic/toppic_gui.cpp:18: /usr/include/powerpc64le-linux-gnu/qt5/QtWidgets/qdesktopwidget.h:88:67: note: declared here 88 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect availableGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~~~~ [ 36%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_stat.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_stat.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_stat.cpp [ 36%] Building CXX object CMakeFiles/toppic_gui.dir/src/console/toppic_argument.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/console/toppic_argument.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/toppic_argument.cpp [ 36%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_cutoff_selector.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_cutoff_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_cutoff_selector.cpp [ 36%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_fdr.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_fdr.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_fdr.cpp [ 36%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_feature_cluster.cpp [ 36%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp [ 37%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_str_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_str_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str_merge.cpp In file included from /usr/include/boost/program_options/parsers.hpp:295, from /usr/include/boost/program_options.hpp:17, from /<>/toppic-1.3.0+dfsg1/src/console/toppic_argument.hpp:28, from /<>/toppic-1.3.0+dfsg1/src/console/toppic_argument.cpp:27: /usr/include/boost/program_options/detail/parsers.hpp: In member function ‘boost::program_options::basic_parsed_options boost::program_options::basic_command_line_parser::run() [with charT = char]’: /usr/include/boost/program_options/detail/parsers.hpp:90:5: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 90 | basic_command_line_parser::run() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_form_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_form_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_form_filter.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp:22: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::PrsmStr::PrsmStr(const std::vector >&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 37%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_table_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_table_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_table_writer.cpp [ 38%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_para.cpp [ 38%] Building CXX object CMakeFiles/toppic_gui.dir/src/console/toppic_process.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/console/toppic_process.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/toppic_process.cpp [ 38%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_top_selector.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_top_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_top_selector.cpp [ 38%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_prob.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_prob.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_prob.cpp [ 38%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.cpp [ 38%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.cpp [ 38%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_sample_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_sample_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_sample_merge.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtr toppic::PrsmReader::readOnePrsm(toppic::FastaIndexReaderPtr, toppic::ModPtrVec)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 38%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_simple_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_simple_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_simple_cluster.cpp [ 38%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_stat.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_stat.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_stat.cpp [ 38%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer.cpp [ 38%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp [ 38%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_xml_writer_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_set.cpp [ 38%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/activation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/activation.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp:22: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::PrsmStr::PrsmStr(const std::vector >&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 38%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/activation_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/activation_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.cpp [ 38%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_util.cpp [ 38%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/amino_acid.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/amino_acid.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.cpp [ 38%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_str_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_str_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str_merge.cpp make -f CMakeFiles/topmg.dir/build.make CMakeFiles/topmg.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg.dir/DependInfo.cmake --color= Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg.dir/depend.internal". [ 38%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/amino_acid_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/amino_acid_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.cpp Scanning dependencies of target topmg make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topmg.dir/build.make CMakeFiles/topmg.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 39%] Building CXX object CMakeFiles/topmg.dir/topmg_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/topmg_autogen/mocs_compilation.cpp.o -c /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/mocs_compilation.cpp [ 39%] Building CXX object CMakeFiles/topmg.dir/src/console/topmg.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/console/topmg.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topmg.cpp [ 39%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/simple_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/simple_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm.cpp [ 39%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/base_data.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/base_data.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/base_data.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/ion.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/ion.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion.cpp [ 40%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_table_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_table_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_table_writer.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/ion_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/ion_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.cpp [ 40%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/simple_prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_reader.cpp [ 40%] Building CXX object CMakeFiles/topmg.dir/src/console/topmg_argument.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/console/topmg_argument.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topmg_argument.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/ion_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/ion_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type_base.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod.cpp [ 40%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/simple_prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_str.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ModPtr toppic::ModBase::getBaseModPtr(toppic::ResiduePtr, toppic::ResiduePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 40%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/simple_prsm_str_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_str_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_str_merge.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp [ 40%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_top_selector.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_top_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_top_selector.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp:24: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘std::vector > > toppic::mod_util::readModTxt(const string&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 40%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.cpp [ 40%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/simple_prsm_table_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_table_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_table_writer.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/neutral_loss.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/neutral_loss.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/neutral_loss_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/neutral_loss_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.cpp In file included from /usr/include/boost/program_options/parsers.hpp:295, from /usr/include/boost/program_options.hpp:17, from /<>/toppic-1.3.0+dfsg1/src/console/topmg_argument.hpp:26, from /<>/toppic-1.3.0+dfsg1/src/console/topmg_argument.cpp:31: /usr/include/boost/program_options/detail/parsers.hpp: In member function ‘boost::program_options::basic_parsed_options boost::program_options::basic_command_line_parser::run() [with charT = char]’: /usr/include/boost/program_options/detail/parsers.hpp:90:5: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 90 | basic_command_line_parser::run() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 40%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/simple_prsm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_util.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/prot_mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/prot_mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/prot_mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/prot_mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_base.cpp [ 40%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/simple_prsm_xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/prot_mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/prot_mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_util.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/ptm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.cpp [ 40%] Building CXX object CMakeFiles/topmg.dir/src/console/topmg_process.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/console/topmg_process.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topmg_process.cpp [ 40%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_set.cpp [ 40%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer.cpp [ 40%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/ptm_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/ptm_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.cpp [ 41%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_util.cpp [ 41%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_xml_writer_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_set.cpp [ 41%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/ptm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/ptm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_util.cpp [ 41%] Building CXX object CMakeFiles/topdiff.dir/src/prsm/theo_peak_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/prsm/theo_peak_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp [ 42%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/residue.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/residue.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue.cpp [ 42%] Building CXX object CMakeFiles/toppic.dir/src/prsm/prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_util.cpp [ 42%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/residue_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/residue_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::TheoPeakPtrVec toppic::theo_peak_util::geneTheoPeak(toppic::BpSpecPtr, toppic::ActivationPtr, toppic::NeutralLossPtr, double, double, int, int, double, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ResiduePtr toppic::ResidueBase::getBaseResiduePtr(toppic::AminoAcidPtr, toppic::PtmPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 43%] Building CXX object CMakeFiles/toppic.dir/src/prsm/simple_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/simple_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm.cpp [ 43%] Building CXX object CMakeFiles/topdiff.dir/src/merge/feature_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/merge/feature_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/merge/feature_prsm.cpp [ 43%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/residue_freq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/residue_freq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_freq.cpp [ 43%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/residue_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/residue_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.cpp In file included from /<>/toppic-1.3.0+dfsg1/src/merge/feature_prsm.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/merge/feature_prsm.cpp:16: /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.hpp: In member function ‘void toppic::FeaturePrsm::addPrsmInfo(toppic::PrsmStrPtr)’: /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.hpp:44:39: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 44 | int getProteoformStartPos() {return proteoform_start_pos_;} | ^~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/topdiff.dir/src/merge/feature_prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/merge/feature_prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/merge/feature_prsm_reader.cpp [ 43%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/support_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/support_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.cpp [ 43%] Building CXX object CMakeFiles/topdiff.dir/src/merge/feature_sample_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/merge/feature_sample_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/merge/feature_sample_merge.cpp [ 43%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/support_peak_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/support_peak_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.cpp [ 43%] Building CXX object CMakeFiles/toppic.dir/src/prsm/simple_prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/simple_prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_reader.cpp [ 43%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/trunc.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/trunc.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc.cpp [ 43%] Building CXX object CMakeFiles/toppic.dir/src/prsm/simple_prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/simple_prsm_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_str.cpp [ 43%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/trunc_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/trunc_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_base.cpp [ 43%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/base/trunc_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/base/trunc_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_util.cpp [ 43%] Building CXX object CMakeFiles/toppic.dir/src/prsm/simple_prsm_str_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/simple_prsm_str_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_str_merge.cpp [ 43%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/thread/simple_thread_pool.cpp.o /usr/bin/c++ 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Scanning dependencies of target topdiff_gui make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topdiff_gui.dir/build.make CMakeFiles/topdiff_gui.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 43%] Building CXX object CMakeFiles/topdiff_gui.dir/topdiff_gui_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/topdiff_gui_autogen/mocs_compilation.cpp.o -c /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/mocs_compilation.cpp [ 43%] Building CXX object CMakeFiles/topmg.dir/src/common/base/amino_acid_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 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CMakeFiles/toppic.dir/src/prsm/simple_prsm_xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer.cpp [ 43%] Building CXX object CMakeFiles/topmg.dir/src/common/base/base_data.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/base_data.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/base_data.cpp [ 43%] Building CXX object CMakeFiles/topdiff_gui.dir/src/gui/topdiff/threadtopdiff.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/gui/topdiff/threadtopdiff.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/topdiff/threadtopdiff.cpp [ 43%] Building CXX object 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-I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/util/str_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/str_util.cpp [ 43%] Building CXX object CMakeFiles/topmg.dir/src/common/base/ion.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/ion.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion.cpp [ 43%] Building CXX object CMakeFiles/toppic.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_set.cpp [ 43%] Building CXX object CMakeFiles/topmg.dir/src/common/base/ion_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/ion_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.cpp [ 43%] Building CXX object CMakeFiles/topdiff_gui.dir/src/gui/topdiff/topdiff_gui.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/gui/topdiff/topdiff_gui.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/topdiff/topdiff_gui.cpp [ 43%] Building CXX object CMakeFiles/topmg.dir/src/common/base/ion_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/ion_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type_base.cpp [ 43%] Building CXX object CMakeFiles/toppic.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_util.cpp [ 43%] Building CXX object CMakeFiles/topmg.dir/src/common/base/mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod.cpp /<>/toppic-1.3.0+dfsg1/src/gui/topdiff/topdiff_gui.cpp: In function ‘int main(int, char**)’: /<>/toppic-1.3.0+dfsg1/src/gui/topdiff/topdiff_gui.cpp:40:44: warning: ‘const QRect QDesktopWidget::availableGeometry(int) const’ is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 40 | QRect deskRect = desk->availableGeometry(); | ^ In file included from /usr/include/powerpc64le-linux-gnu/qt5/QtWidgets/QDesktopWidget:1, from /<>/toppic-1.3.0+dfsg1/src/gui/topdiff/topdiff_gui.cpp:19: /usr/include/powerpc64le-linux-gnu/qt5/QtWidgets/qdesktopwidget.h:88:67: note: declared here 88 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect availableGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/toppic.dir/src/prsm/theo_peak_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/theo_peak_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp [ 43%] Building CXX object CMakeFiles/topdiff_gui.dir/src/gui/topdiff/topdiffdialog.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/gui/topdiff/topdiffdialog.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/topdiff/topdiffdialog.cpp [ 43%] Building CXX object CMakeFiles/topmg.dir/src/common/base/mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp [ 43%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/util/time_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/util/time_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/time_util.cpp [ 44%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_document.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_document.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_document.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ModPtr toppic::ModBase::getBaseModPtr(toppic::ResiduePtr, toppic::ResiduePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 44%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_err_handler.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_err_handler.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_err_handler.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::TheoPeakPtrVec toppic::theo_peak_util::geneTheoPeak(toppic::BpSpecPtr, toppic::ActivationPtr, toppic::NeutralLossPtr, double, double, int, int, double, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 44%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_impl.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_impl.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_impl.cpp [ 45%] Building CXX object CMakeFiles/topmg.dir/src/common/base/mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp [ 45%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_parser.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_parser.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_parser.cpp [ 45%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_util.cpp [ 45%] Building CXX object CMakeFiles/toppic.dir/src/filter/diag/diag_filter_mng.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/diag/diag_filter_mng.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_mng.cpp [ 45%] Building CXX object CMakeFiles/toppic.dir/src/filter/diag/diag_filter_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/diag/diag_filter_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_processor.cpp [ 45%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/xml/xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/xml/xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp:24: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘std::vector > > toppic::mod_util::readModTxt(const string&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 45%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/alter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/alter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter.cpp [ 45%] Building CXX object CMakeFiles/topmg.dir/src/common/base/neutral_loss.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/neutral_loss.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.cpp [ 45%] Building CXX object CMakeFiles/topmg.dir/src/common/base/neutral_loss_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/neutral_loss_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.cpp [ 45%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/alter_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/alter_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter_type.cpp [ 45%] Building CXX object CMakeFiles/topmg.dir/src/common/base/prot_mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/prot_mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod.cpp [ 45%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/bp_spec.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/bp_spec.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp [ 45%] Building CXX object CMakeFiles/topdiff_gui.dir/src/console/topdiff_argument.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/console/topdiff_argument.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topdiff_argument.cpp [ 45%] Building CXX object CMakeFiles/topmg.dir/src/common/base/prot_mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/prot_mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/break_point.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::BpSpec::initBreakPoints(const ResSeqPtr&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_processor.cpp:18: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::DiagFilterProcessor::processBlock(toppic::DbBlockPtr, int, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 45%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/break_point.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/break_point.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/break_point.cpp [ 45%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/db_block.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/db_block.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/db_block.cpp [ 45%] Building CXX object CMakeFiles/topmg.dir/src/common/base/prot_mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/prot_mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_util.cpp [ 45%] Building CXX object CMakeFiles/topmg.dir/src/common/base/ptm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.cpp [ 45%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_index_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_index_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_index_reader.cpp [ 45%] Building CXX object CMakeFiles/topmg.dir/src/common/base/ptm_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/ptm_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.cpp [ 45%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_reader.cpp [ 45%] Building CXX object CMakeFiles/toppic.dir/src/filter/diag/mass_diag_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/diag/mass_diag_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/mass_diag_filter.cpp [ 45%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.cpp [ 45%] Building CXX object CMakeFiles/topmg.dir/src/common/base/ptm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/ptm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_util.cpp [ 45%] Building CXX object CMakeFiles/topmg.dir/src/common/base/residue.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/residue.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue.cpp In file included from /usr/include/boost/program_options/parsers.hpp:295, from /usr/include/boost/program_options.hpp:17, from /<>/toppic-1.3.0+dfsg1/src/console/topdiff_argument.hpp:24, from /<>/toppic-1.3.0+dfsg1/src/console/topdiff_argument.cpp:21: /usr/include/boost/program_options/detail/parsers.hpp: In member function ‘boost::program_options::basic_parsed_options boost::program_options::basic_command_line_parser::run() [with charT = char]’: /usr/include/boost/program_options/detail/parsers.hpp:90:5: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 90 | basic_command_line_parser::run() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 46%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_sub_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_sub_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.cpp [ 46%] Building CXX object CMakeFiles/toppic.dir/src/filter/massmatch/filter_protein.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/massmatch/filter_protein.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/filter_protein.cpp [ 46%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_sub_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_sub_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp [ 46%] Building CXX object CMakeFiles/topmg.dir/src/common/base/residue_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/residue_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::FastaSubSeqPtrVec toppic::fasta_sub_util::breakSeq(toppic::FastaSeqPtr, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 47%] Building CXX object CMakeFiles/toppic.dir/src/filter/massmatch/mass_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/massmatch/mass_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ResiduePtr toppic::ResidueBase::getBaseResiduePtr(toppic::AminoAcidPtr, toppic::PtmPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/topmg.dir/src/common/base/residue_freq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/residue_freq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_freq.cpp [ 47%] Building CXX object CMakeFiles/toppic.dir/src/filter/massmatch/mass_match_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/massmatch/mass_match_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match_factory.cpp [ 47%] Building CXX object CMakeFiles/topmg.dir/src/common/base/residue_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/residue_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.cpp [ 47%] Building CXX object CMakeFiles/topdiff_gui.dir/src/console/topdiff_process.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/console/topdiff_process.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topdiff_process.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/local_anno.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/local_anno.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/local_anno.cpp [ 47%] Building CXX object CMakeFiles/topmg.dir/src/common/base/support_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/support_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.cpp [ 47%] Building CXX object CMakeFiles/topmg.dir/src/common/base/support_peak_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/support_peak_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/mass_shift.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/mass_shift.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp [ 47%] Building CXX object CMakeFiles/toppic.dir/src/filter/massmatch/mass_match_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/massmatch/mass_match_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match_util.cpp [ 48%] Building CXX object CMakeFiles/topmg.dir/src/common/base/trunc.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/trunc.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc.cpp In file included from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp:20: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp: In constructor ‘toppic::MassShift::MassShift(toppic::AlterPtr)’: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:38:30: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 38 | int getLeftBpPos() {return left_bp_pos_;} | ^~~~~~~~~~~~ [ 48%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/proteoform.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/proteoform.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.cpp [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/activation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/activation.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation.cpp [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/base/trunc_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/trunc_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_base.cpp [ 49%] Building CXX object CMakeFiles/toppic.dir/src/filter/oneptm/mass_one_ptm_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/oneptm/mass_one_ptm_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/mass_one_ptm_filter.cpp [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/activation_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/activation_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.cpp [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/base/trunc_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/base/trunc_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_util.cpp [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/thread/simple_thread_pool.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/thread/simple_thread_pool.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.cpp [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/amino_acid.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/amino_acid.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/mass_one_ptm_filter.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::MassOnePtmFilter::computeBestMatch(const PrmMsPtrVec&, const PrmMsPtrVec&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/amino_acid_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/amino_acid_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.cpp [ 49%] Building CXX object CMakeFiles/toppic.dir/src/filter/oneptm/one_ptm_filter_mng.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/oneptm/one_ptm_filter_mng.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_mng.cpp [ 49%] Building CXX object CMakeFiles/toppic.dir/src/filter/oneptm/one_ptm_filter_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/oneptm/one_ptm_filter_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_processor.cpp [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/base_data.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/base_data.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/base_data.cpp [ 49%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/proteoform_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/proteoform_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/ion.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/ion.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion.cpp [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/ion_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/ion_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.cpp [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/util/file_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/util/file_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/file_util.cpp [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/ion_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/ion_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ProteoformPtr toppic::proteoform_factory::geneDbProteoformPtr(toppic::FastaSeqPtr, toppic::ModPtrVec)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod.cpp [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/util/logger.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/util/logger.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/logger.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ModPtr toppic::ModBase::getBaseModPtr(toppic::ResiduePtr, toppic::ResiduePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /usr/include/boost/system/detail/std_interoperability.hpp:12, from /usr/include/boost/system/error_code.hpp:963, from /usr/include/boost/system/system_error.hpp:11, from /usr/include/boost/thread/exceptions.hpp:22, from /usr/include/boost/thread/pthread/thread_data.hpp:10, from /usr/include/boost/thread/thread_only.hpp:17, from /usr/include/boost/thread/thread.hpp:12, from /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_processor.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::filterBlock(const ProteoformPtrVec&, const string&, toppic::OnePtmFilterMngPtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/util/str_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/util/str_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/str_util.cpp [ 49%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/proteoform_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/proteoform_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_type.cpp [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp [ 49%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/proteoform_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/proteoform_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp:24: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘std::vector > > toppic::mod_util::readModTxt(const string&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 49%] Building CXX object CMakeFiles/toppic.dir/src/filter/zeroptm/mass_zero_ptm_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/zeroptm/mass_zero_ptm_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/zeroptm/mass_zero_ptm_filter.cpp [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/util/time_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/util/time_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/time_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ProteoformPtr toppic::proteoform_util::geneDbProteoformPtr(toppic::FastaSubSeqPtr, toppic::ModPtrVec, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/neutral_loss.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/neutral_loss.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.cpp [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/xml/xml_dom_document.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/xml/xml_dom_document.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_document.cpp [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/neutral_loss_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/neutral_loss_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.cpp [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/xml/xml_dom_err_handler.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/xml/xml_dom_err_handler.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_err_handler.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/filter/zeroptm/mass_zero_ptm_filter.cpp:16: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::MassZeroPtmFilter::computeBestMatch(const ExtendMsPtrVec&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/xml/xml_dom_impl.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/xml/xml_dom_impl.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_impl.cpp [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/xml/xml_dom_parser.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/xml/xml_dom_parser.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_parser.cpp [ 49%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/prot_mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/prot_mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod.cpp [ 49%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/residue_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/residue_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/residue_seq.cpp [ 49%] Building CXX object CMakeFiles/topmg.dir/src/common/xml/xml_dom_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/xml/xml_dom_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_util.cpp [ 49%] Building CXX object CMakeFiles/toppic.dir/src/filter/zeroptm/zero_ptm_filter_mng.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/zeroptm/zero_ptm_filter_mng.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/zeroptm/zero_ptm_filter_mng.cpp [ 49%] Building CXX object CMakeFiles/toppic.dir/src/filter/zeroptm/zero_ptm_filter_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/zeroptm/zero_ptm_filter_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/zeroptm/zero_ptm_filter_processor.cpp [ 50%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/prot_mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/prot_mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_base.cpp [ 50%] Building CXX object CMakeFiles/topmg.dir/src/common/xml/xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/common/xml/xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_writer.cpp [ 50%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/seq_segment.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/seq_segment.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/seq_segment.cpp [ 50%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/base_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/base_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.cpp [ 51%] Building CXX object CMakeFiles/topmg.dir/src/seq/alter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/alter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter.cpp [ 51%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/baseline_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/baseline_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/baseline_util.cpp [ 51%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/prot_mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/prot_mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_util.cpp [ 51%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/deconv_json_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/deconv_json_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_json_merge.cpp [ 51%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/ptm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.cpp [ 51%] Building CXX object CMakeFiles/topmg.dir/src/seq/alter_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/alter_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter_type.cpp [ 51%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/ptm_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/ptm_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.cpp [ 51%] Building CXX object CMakeFiles/topmg.dir/src/seq/bp_spec.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/bp_spec.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp [ 51%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/deconv_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/deconv_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/break_point.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::BpSpec::initBreakPoints(const ResSeqPtr&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 52%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/deconv_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/deconv_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /usr/include/boost/system/detail/std_interoperability.hpp:12, from /usr/include/boost/system/error_code.hpp:963, from /usr/include/boost/system/system_error.hpp:11, from /usr/include/boost/thread/exceptions.hpp:22, from /usr/include/boost/thread/pthread/thread_data.hpp:10, from /usr/include/boost/thread/thread_only.hpp:17, from /usr/include/boost/thread/thread.hpp:12, from /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/filter/zeroptm/zero_ptm_filter_processor.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::filterBlock(const ProteoformPtrVec&, const string&, toppic::ZeroPtmFilterMngPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 52%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/ptm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/ptm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_util.cpp [ 52%] Building CXX object CMakeFiles/topmg.dir/src/seq/break_point.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/break_point.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/break_point.cpp [ 52%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/env_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/env_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.cpp [ 52%] Building CXX object CMakeFiles/topmg.dir/src/seq/db_block.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/db_block.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/db_block.cpp [ 52%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/residue.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/residue.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue.cpp [ 52%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/extend_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/extend_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms.cpp [ 52%] Building CXX object CMakeFiles/topmg.dir/src/seq/fasta_index_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/fasta_index_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_index_reader.cpp [ 52%] Building CXX object CMakeFiles/toppic.dir/src/search/zeroptmsearch/zero_ptm_fast_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/zeroptmsearch/zero_ptm_fast_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_fast_match.cpp [ 52%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/residue_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/residue_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp [ 52%] Building CXX object CMakeFiles/topmg.dir/src/seq/fasta_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/fasta_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_reader.cpp [ 52%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/extend_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/extend_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp [ 52%] Building CXX object CMakeFiles/topmg.dir/src/seq/fasta_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/fasta_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ResiduePtr toppic::ResidueBase::getBaseResiduePtr(toppic::AminoAcidPtr, toppic::PtmPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 52%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/residue_freq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/residue_freq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_freq.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ExtendMsPtrVec toppic::extend_ms_factory::geneMsThreePtrVec(const DeconvMsPtrVec&, toppic::SpParaPtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 52%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/residue_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/residue_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_fast_match.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_fast_match.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ZpFastMatchPtrVec toppic::ZeroPtmFastMatch::filter(toppic::ProteoformTypePtr, const ExtendMsPtrVec&, const ProteoformPtrVec&, int, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 52%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/extend_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/extend_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_peak.cpp [ 52%] Building CXX object CMakeFiles/toppic.dir/src/search/zeroptmsearch/zero_ptm_search_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/zeroptmsearch/zero_ptm_search_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_search_processor.cpp [ 52%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/ms_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/ms_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp [ 52%] Building CXX object CMakeFiles/topmg.dir/src/seq/fasta_sub_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/fasta_sub_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.cpp [ 52%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/support_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/support_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.cpp [ 52%] Building CXX object CMakeFiles/topmg.dir/src/seq/fasta_sub_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/fasta_sub_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp [ 52%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/support_peak_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/support_peak_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::FastaSubSeqPtrVec toppic::fasta_sub_util::breakSeq(toppic::FastaSeqPtr, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp: In static member function ‘static toppic::MsHeaderPtr toppic::MsHeader::geneMsHeaderPtr(toppic::MsHeaderPtr, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp:169:13: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 169 | MsHeaderPtr MsHeader::geneMsHeaderPtr(MsHeaderPtr ori_ptr, double new_prec_mass) { | ^~~~~~~~ [ 52%] Building CXX object CMakeFiles/topmg.dir/src/seq/fasta_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/fasta_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp [ 52%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_frac_merge.cpp [ 52%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/trunc.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/trunc.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc.cpp /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_search_processor.cpp:23: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtrVec toppic::ZeroPtmSearchProcessor::zeroPtmSearchOneSpec(toppic::SpectrumSetPtr, const SimplePrsmPtrVec&, toppic::FastaIndexReaderPtr, toppic::ZeroPtmSearchMngPtr, toppic::ProteoformTypePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 52%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/trunc_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/trunc_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_base.cpp [ 52%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp [ 52%] Building CXX object CMakeFiles/topmg.dir/src/seq/local_anno.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/local_anno.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/local_anno.cpp [ 52%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/trunc_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/trunc_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_util.cpp [ 53%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/thread/simple_thread_pool.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/thread/simple_thread_pool.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.cpp [ 53%] Building CXX object CMakeFiles/topmg.dir/src/seq/mass_shift.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/mass_shift.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp [ 53%] Building CXX object CMakeFiles/toppic.dir/src/search/zeroptmsearch/zero_ptm_slow_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/zeroptmsearch/zero_ptm_slow_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_slow_match.cpp In file included from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp:20: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp: In constructor ‘toppic::MassShift::MassShift(toppic::AlterPtr)’: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:38:30: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 38 | int getLeftBpPos() {return left_bp_pos_;} | ^~~~~~~~~~~~ [ 53%] Building CXX object CMakeFiles/topmg.dir/src/seq/proteoform.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/proteoform.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘std::vector > toppic::MsAlignReader::getNextSpectrumSet(toppic::SpParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 53%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_thread_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_thread_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_thread_merge.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_slow_match.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtr toppic::ZeroPtmSlowMatch::geneResult()’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 53%] Building CXX object CMakeFiles/toppic.dir/src/search/oneptmsearch/basic_diag_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/basic_diag_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/basic_diag_pair.cpp [ 53%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/util/file_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/util/file_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/file_util.cpp [ 53%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_util.cpp [ 53%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_writer.cpp [ 53%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.cpp [ 53%] Building CXX object CMakeFiles/toppic.dir/src/search/oneptmsearch/diagonal.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/diagonal.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal.cpp [ 54%] Building CXX object CMakeFiles/topmg.dir/src/seq/proteoform_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/proteoform_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp [ 54%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/peak_tolerance.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/peak_tolerance.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.cpp [ 54%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/util/logger.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/util/logger.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/logger.cpp [ 54%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/prm_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/prm_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp [ 54%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/util/str_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/util/str_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/str_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::PrmPeakPtrVec toppic::prm_ms::getPrmPeakPtrs(const PrmMsPtrVec&, toppic::PeakTolerancePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ProteoformPtr toppic::proteoform_factory::geneDbProteoformPtr(toppic::FastaSeqPtr, toppic::ModPtrVec)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 55%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/prm_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/prm_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::prm_ms_factory::addSixMasses(toppic::PrmPeakPtrVec&, int, toppic::DeconvPeakPtr, double, toppic::ActivationPtr, toppic::PeakTolerancePtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 56%] Building CXX object CMakeFiles/toppic.dir/src/search/oneptmsearch/diagonal_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/diagonal_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp [ 56%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/util/time_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/util/time_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/time_util.cpp [ 56%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/xml/xml_dom_document.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/xml/xml_dom_document.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_document.cpp [ 56%] Building CXX object CMakeFiles/topmg.dir/src/seq/proteoform_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/proteoform_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_type.cpp /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp: In member function ‘toppic::DiagonalHeaderPtr toppic::DiagonalHeader::clone()’: /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp:27:19: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 27 | DiagonalHeaderPtr DiagonalHeader::clone() { | ^~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/xml/xml_dom_err_handler.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/xml/xml_dom_err_handler.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_err_handler.cpp [ 56%] Building CXX object CMakeFiles/topmg.dir/src/seq/proteoform_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/proteoform_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp [ 56%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/xml/xml_dom_impl.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/xml/xml_dom_impl.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_impl.cpp [ 56%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/xml/xml_dom_parser.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/xml/xml_dom_parser.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_parser.cpp [ 56%] Building CXX object CMakeFiles/toppic.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header_util.cpp [ 56%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/xml/xml_dom_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/xml/xml_dom_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_util.cpp [ 56%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/prm_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/prm_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp [ 56%] Building CXX object CMakeFiles/toppic.dir/src/search/oneptmsearch/dp_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/dp_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.cpp [ 56%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/xml/xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/xml/xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::PrmPeak::addNghbEdge(toppic::DeconvPeakPtr, double, toppic::SPTypePtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 56%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/prm_peak_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/prm_peak_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ProteoformPtr toppic::proteoform_util::geneDbProteoformPtr(toppic::FastaSubSeqPtr, toppic::ModPtrVec, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/pair.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::DPPair::DPPair(int, int, double, double, int, int, toppic::DiagonalHeaderPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 56%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/alter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/alter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter.cpp [ 56%] Building CXX object CMakeFiles/toppic.dir/src/search/oneptmsearch/one_ptm_search_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/one_ptm_search_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/one_ptm_search_processor.cpp [ 56%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/raw_ms_group.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/raw_ms_group.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_group.cpp [ 56%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/raw_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/raw_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.cpp [ 56%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/alter_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/alter_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter_type.cpp [ 56%] Building CXX object CMakeFiles/topmg.dir/src/seq/residue_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/residue_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/residue_seq.cpp [ 56%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/rm_break_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/rm_break_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/rm_break_type.cpp [ 56%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/bp_spec.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/bp_spec.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp [ 56%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/sp_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/sp_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/sp_para.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/break_point.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::BpSpec::initBreakPoints(const ResSeqPtr&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 56%] Building CXX object CMakeFiles/topmg.dir/src/seq/seq_segment.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/seq_segment.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/seq_segment.cpp [ 56%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/base_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/base_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.cpp [ 57%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/break_point.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/break_point.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/break_point.cpp [ 57%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/spectrum_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/spectrum_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/spectrum_set.cpp [ 57%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/baseline_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/baseline_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/baseline_util.cpp [ 57%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/db_block.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/db_block.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/db_block.cpp [ 57%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/deconv_json_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/deconv_json_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_json_merge.cpp [ 57%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/fasta_index_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/fasta_index_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_index_reader.cpp [ 57%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/support_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/support_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/support_peak.cpp [ 57%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/fasta_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/fasta_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_reader.cpp [ 57%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/theo_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/theo_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/theo_peak.cpp [ 57%] Building CXX object CMakeFiles/toppic.dir/src/search/oneptmsearch/one_ptm_slow_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/one_ptm_slow_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/one_ptm_slow_match.cpp [ 57%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/charge_cmp.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/charge_cmp.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/charge_cmp.cpp [ 57%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/deconv_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/deconv_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms_util.cpp [ 57%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/fasta_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/fasta_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.cpp [ 57%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/env_assign.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/env_assign.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_assign.cpp [ 57%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/deconv_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/deconv_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.cpp [ 57%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/env_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/env_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.cpp [ 57%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/env_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/env_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp [ 57%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/fasta_sub_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/fasta_sub_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.cpp [ 57%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/extend_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/extend_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms.cpp [ 57%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/fasta_sub_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/fasta_sub_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::EnvBase::EnvBase(std::string, int, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 57%] Building CXX object CMakeFiles/toppic.dir/src/search/oneptmsearch/ps_align.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/ps_align.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/ps_align.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::FastaSubSeqPtrVec toppic::fasta_sub_util::breakSeq(toppic::FastaSeqPtr, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 57%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/fasta_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/fasta_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp [ 57%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/env_detect.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/env_detect.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp [ 57%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/extend_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/extend_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::MatchEnvPtr toppic::EnvDetect::detectEnv(const PeakPtrVec&, int, int, double, toppic::EnvParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 58%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_filter.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/ps_align.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtr toppic::PSAlign::geneResult(int, toppic::ProteoformPtr, toppic::DeconvMsPtrVec&, toppic::ExtendMsPtrVec&, toppic::PrsmParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ExtendMsPtrVec toppic::extend_ms_factory::geneMsThreePtrVec(const DeconvMsPtrVec&, toppic::SpParaPtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 58%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/local_anno.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/local_anno.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/local_anno.cpp [ 58%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/extend_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/extend_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_peak.cpp [ 58%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/env_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/env_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/ms_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/ms_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp [ 59%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/mass_shift.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/mass_shift.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp: In constructor ‘toppic::EnvPara::EnvPara(toppic::TopfdParaPtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp:20:1: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 20 | EnvPara::EnvPara(TopfdParaPtr topfd_para_ptr) { | ^~~~~~~ [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/env_peak_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/env_peak_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_peak_pair.cpp [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/env_rescore.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/env_rescore.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_rescore.cpp In file included from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp:20: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp: In constructor ‘toppic::MassShift::MassShift(toppic::AlterPtr)’: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:38:30: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 38 | int getLeftBpPos() {return left_bp_pos_;} | ^~~~~~~~~~~~ /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp: In static member function ‘static toppic::MsHeaderPtr toppic::MsHeader::geneMsHeaderPtr(toppic::MsHeaderPtr, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp:169:13: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 169 | MsHeaderPtr MsHeader::geneMsHeaderPtr(MsHeaderPtr ori_ptr, double new_prec_mass) { | ^~~~~~~~ [ 59%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/proteoform.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/proteoform.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.cpp [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/msalign_frac_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/msalign_frac_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_frac_merge.cpp [ 59%] Building CXX object CMakeFiles/toppic.dir/src/search/ptmsearch/comp_shift_low_mem.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/ptmsearch/comp_shift_low_mem.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/ptmsearch/comp_shift_low_mem.cpp [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/envelope.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/envelope.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/msalign_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/msalign_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp [ 59%] Building CXX object CMakeFiles/toppic.dir/src/search/ptmsearch/ptm_search_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/ptmsearch/ptm_search_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/ptmsearch/ptm_search_processor.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp: In copy constructor ‘toppic::Envelope::Envelope(toppic::Envelope&)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp:26:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 26 | Envelope::Envelope(Envelope &env): | ^~~~~~~~ [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/match_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/match_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env.cpp [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/match_env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/match_env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_filter.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘std::vector > toppic::MsAlignReader::getNextSpectrumSet(toppic::SpParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/msalign_thread_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/msalign_thread_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_thread_merge.cpp [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/match_env_refine.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/match_env_refine.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_refine.cpp [ 59%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/proteoform_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/proteoform_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/match_env_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/match_env_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/msalign_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/msalign_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ProteoformPtr toppic::proteoform_factory::geneDbProteoformPtr(toppic::FastaSeqPtr, toppic::ModPtrVec)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/msalign_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/msalign_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_writer.cpp [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.cpp [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/peak_tolerance.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/peak_tolerance.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/ptmsearch/ptm_search_processor.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In lambda function: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MatchEnvPtrVec toppic::match_env_util::addLowMassPeak(toppic::MatchEnvPtrVec&, toppic::PeakPtrVec&, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 59%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/proteoform_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/proteoform_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_type.cpp [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/prm_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/prm_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/match_env_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/match_env_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_writer.cpp [ 59%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/proteoform_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/proteoform_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/prec_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/prec_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/prec_env.cpp [ 59%] Building CXX object CMakeFiles/toppic.dir/src/search/ptmsearch/ptm_search_slow_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/ptmsearch/ptm_search_slow_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/ptmsearch/ptm_search_slow_filter.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::PrmPeakPtrVec toppic::prm_ms::getPrmPeakPtrs(const PrmMsPtrVec&, toppic::PeakTolerancePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/prm_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/prm_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ProteoformPtr toppic::proteoform_util::geneDbProteoformPtr(toppic::FastaSubSeqPtr, toppic::ModPtrVec, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::prm_ms_factory::addSixMasses(toppic::PrmPeakPtrVec&, int, toppic::DeconvPeakPtr, double, toppic::ActivationPtr, toppic::PeakTolerancePtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/real_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/real_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp: In constructor ‘toppic::RealEnv::RealEnv(const PeakPtrVec&, toppic::EnvelopePtr, double, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp:25:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 25 | RealEnv::RealEnv(const PeakPtrVec &peak_list, EnvelopePtr theo_env, | ^~~~~~~ [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/feature_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/feature_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/feature_merge.cpp [ 59%] Building CXX object CMakeFiles/toppic.dir/src/search/ptmsearch/ptm_slow_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/ptmsearch/ptm_slow_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/ptmsearch/ptm_slow_match.cpp [ 59%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/residue_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/residue_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/residue_seq.cpp [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/prm_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/prm_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp [ 60%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/seq_segment.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/seq_segment.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/seq_segment.cpp [ 60%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/base_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/base_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.cpp [ 60%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/baseline_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/baseline_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/baseline_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::PrmPeak::addNghbEdge(toppic::DeconvPeakPtr, double, toppic::SPTypePtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 60%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/prm_peak_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/prm_peak_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.cpp [ 60%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/frac_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/frac_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp [ 60%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/deconv_json_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/deconv_json_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_json_merge.cpp [ 60%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/raw_ms_group.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/raw_ms_group.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_group.cpp [ 60%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/raw_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/raw_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::FracFeature::FracFeature(toppic::XmlDOMElement*)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 60%] Building CXX object CMakeFiles/toppic.dir/src/stat/tdgf/comp_prob_value.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/stat/tdgf/comp_prob_value.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_prob_value.cpp [ 61%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/frac_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/frac_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_cluster.cpp [ 61%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/deconv_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/deconv_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms_util.cpp [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/rm_break_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/rm_break_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/rm_break_type.cpp [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/sp_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/sp_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/sp_para.cpp [ 62%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/deconv_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/deconv_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.cpp In file included from /usr/include/c++/10/vector:72, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_prob_value.cpp:20: /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const toppic::ProbPeak&}; _Tp = toppic::ProbPeak; _Alloc = std::allocator]’: /usr/include/c++/10/bits/vector.tcc:426:7: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/frac_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/frac_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_reader.cpp [ 62%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/env_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/env_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.cpp [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/spectrum_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/spectrum_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/spectrum_set.cpp [ 62%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/extend_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/extend_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms.cpp [ 62%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/frac_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/frac_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_writer.cpp [ 62%] Building CXX object CMakeFiles/toppic.dir/src/stat/tdgf/comp_pvalue_array.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/stat/tdgf/comp_pvalue_array.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_array.cpp [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/support_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/support_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/support_peak.cpp [ 62%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/extend_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/extend_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/theo_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/spec/theo_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/theo_peak.cpp [ 62%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/frac_xml_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/frac_xml_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_xml_feature_reader.cpp [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/charge_cmp.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/charge_cmp.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/charge_cmp.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ExtendMsPtrVec toppic::extend_ms_factory::geneMsThreePtrVec(const DeconvMsPtrVec&, toppic::SpParaPtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/env_assign.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/env_assign.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_assign.cpp [ 62%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/extend_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/extend_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_peak.cpp [ 62%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/peak_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/peak_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster.cpp [ 62%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/ms_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/ms_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/env_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/env_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp [ 62%] Building CXX object CMakeFiles/toppic.dir/src/stat/tdgf/comp_pvalue_lookup_table.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/stat/tdgf/comp_pvalue_lookup_table.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.cpp /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp: In static member function ‘static toppic::MsHeaderPtr toppic::MsHeader::geneMsHeaderPtr(toppic::MsHeaderPtr, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp:169:13: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 169 | MsHeaderPtr MsHeader::geneMsHeaderPtr(MsHeaderPtr ori_ptr, double new_prec_mass) { | ^~~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::EnvBase::EnvBase(std::string, int, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 62%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_frac_merge.cpp [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/env_detect.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/env_detect.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::MatchEnvPtr toppic::EnvDetect::detectEnv(const PeakPtrVec&, int, int, double, toppic::EnvParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 62%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/msalign_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/msalign_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_para.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/tdgf_mng.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.cpp:23: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::CompPValueLookupTable::CompPValueLookupTable(toppic::TdgfMngPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_filter.cpp [ 62%] Building CXX object CMakeFiles/toppic.dir/src/stat/tdgf/count_test_num.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/stat/tdgf/count_test_num.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/count_test_num.cpp [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/env_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/env_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp: In constructor ‘toppic::EnvPara::EnvPara(toppic::TopfdParaPtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp:20:1: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 20 | EnvPara::EnvPara(TopfdParaPtr topfd_para_ptr) { | ^~~~~~~ [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/env_peak_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/env_peak_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_peak_pair.cpp [ 62%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/env_rescore.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/env_rescore.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_rescore.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘std::vector > toppic::MsAlignReader::getNextSpectrumSet(toppic::SpParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 63%] Building CXX object CMakeFiles/toppic.dir/src/stat/tdgf/evalue_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/stat/tdgf/evalue_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/evalue_processor.cpp [ 63%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/msalign_thread_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/msalign_thread_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_thread_merge.cpp [ 63%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/peak_cluster_score.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/peak_cluster_score.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster_score.cpp [ 63%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/envelope.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/envelope.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp [ 64%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/msalign_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/msalign_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_util.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp: In copy constructor ‘toppic::Envelope::Envelope(toppic::Envelope&)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp:26:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 26 | Envelope::Envelope(Envelope &env): | ^~~~~~~~ [ 64%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/match_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/match_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env.cpp [ 64%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/sample_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/sample_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature.cpp [ 64%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/msalign_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/msalign_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_writer.cpp [ 65%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/match_env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/match_env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_filter.cpp [ 65%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/sample_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/sample_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_reader.cpp [ 65%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.cpp [ 65%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/sample_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/sample_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/evalue_processor.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::EValueProcessor::init()’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 65%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/peak_tolerance.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/peak_tolerance.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.cpp [ 65%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/match_env_refine.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/match_env_refine.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_refine.cpp [ 65%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/prm_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/prm_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp [ 65%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/savitzky_golay.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/savitzky_golay.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/savitzky_golay.cpp [ 65%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/match_env_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/match_env_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::PrmPeakPtrVec toppic::prm_ms::getPrmPeakPtrs(const PrmMsPtrVec&, toppic::PeakTolerancePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 65%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/prm_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/prm_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp [ 65%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/single_charge_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/single_charge_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/single_charge_feature.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::prm_ms_factory::addSixMasses(toppic::PrmPeakPtrVec&, int, toppic::DeconvPeakPtr, double, toppic::ActivationPtr, toppic::PeakTolerancePtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 65%] Building CXX object CMakeFiles/toppic.dir/src/stat/tdgf/tdgf_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/stat/tdgf/tdgf_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/tdgf_util.cpp [ 65%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/spec_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/spec_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MatchEnvPtrVec toppic::match_env_util::addLowMassPeak(toppic::MatchEnvPtrVec&, toppic::PeakPtrVec&, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp: In constructor ‘toppic::SpecFeature::SpecFeature(toppic::MsHeaderPtr, toppic::FracFeaturePtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp:63:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 63 | SpecFeature::SpecFeature(MsHeaderPtr header, FracFeaturePtr feature) { | ^~~~~~~~~~~ [ 65%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/match_env_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/match_env_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_writer.cpp [ 65%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/spec_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/spec_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_reader.cpp [ 65%] Building CXX object CMakeFiles/toppic.dir/src/stat/local/local_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/stat/local/local_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/local/local_processor.cpp [ 65%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/prec_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/prec_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/prec_env.cpp [ 65%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/feature/spec_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/spec_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_writer.cpp [ 65%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/prm_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/prm_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp [ 66%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/extreme_value.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/extreme_value.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/extreme_value.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::PrmPeak::addNghbEdge(toppic::DeconvPeakPtr, double, toppic::SPTypePtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 66%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/prm_peak_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/prm_peak_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.cpp [ 66%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/real_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/real_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp [ 66%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/mass_shift_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/mass_shift_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/mass_shift_str.cpp [ 66%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/raw_ms_group.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/raw_ms_group.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_group.cpp [ 66%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/peak_ion_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/peak_ion_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/peak_ion_pair.cpp [ 66%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/raw_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/raw_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp: In constructor ‘toppic::RealEnv::RealEnv(const PeakPtrVec&, toppic::EnvelopePtr, double, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp:25:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 25 | RealEnv::RealEnv(const PeakPtrVec &peak_list, EnvelopePtr theo_env, | ^~~~~~~ [ 66%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/feature_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/feature_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/feature_merge.cpp [ 66%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/peak_ion_pair_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/peak_ion_pair_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/peak_ion_pair_util.cpp [ 66%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/rm_break_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/rm_break_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/rm_break_type.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/local/local_processor.cpp:23: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::LocalProcessor::compOnePtmScr(toppic::ProteoformPtr, const ExtendMsPtrVec&, std::vector&, double&, toppic::PtmPtrVec&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 66%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/sp_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/sp_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/sp_para.cpp [ 66%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/frac_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/frac_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp [ 66%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/spectrum_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/spectrum_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/spectrum_set.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::FracFeature::FracFeature(toppic::XmlDOMElement*)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 66%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp [ 66%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/frac_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/frac_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_cluster.cpp [ 66%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/support_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/support_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/support_peak.cpp [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/theo_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/theo_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/theo_peak.cpp [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/charge_cmp.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/charge_cmp.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/charge_cmp.cpp [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/env_assign.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/env_assign.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_assign.cpp [ 67%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/frac_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/frac_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_reader.cpp /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp: In copy constructor ‘toppic::Prsm::Prsm(const toppic::Prsm&)’: /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp:51:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 51 | Prsm::Prsm(const Prsm &obj) { | ^~~~ [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/env_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/env_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp [ 67%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_algo.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_algo.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_algo.cpp [ 67%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/frac_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/frac_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_writer.cpp [ 67%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_cluster.cpp [ 67%] Building CXX object CMakeFiles/toppic.dir/src/stat/local/local_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/stat/local/local_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/local/local_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::EnvBase::EnvBase(std::string, int, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 67%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/frac_xml_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/frac_xml_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_xml_feature_reader.cpp [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/env_detect.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/env_detect.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::MatchEnvPtr toppic::EnvDetect::detectEnv(const PeakPtrVec&, int, int, double, toppic::EnvParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 67%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/peak_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/peak_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster.cpp [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_filter.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/local/local_util.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MassShiftPtr toppic::local_util::geneMassShift(toppic::MassShiftPtr, double, toppic::AlterTypePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 67%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_coverage.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_coverage.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_coverage.cpp [ 67%] Building CXX object CMakeFiles/toppic.dir/src/visual/anno_cleavage.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/visual/anno_cleavage.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_cleavage.cpp [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/env_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/env_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp: In constructor ‘toppic::EnvPara::EnvPara(toppic::TopfdParaPtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp:20:1: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 20 | EnvPara::EnvPara(TopfdParaPtr topfd_para_ptr) { | ^~~~~~~ [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/env_peak_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/env_peak_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_peak_pair.cpp [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/env_rescore.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/env_rescore.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_rescore.cpp [ 67%] Building CXX object CMakeFiles/toppic.dir/src/visual/anno_file_list.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/visual/anno_file_list.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_file_list.cpp [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/envelope.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/envelope.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp [ 67%] Building CXX object CMakeFiles/toppic.dir/src/visual/anno_mass_shift.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/visual/anno_mass_shift.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_mass_shift.cpp [ 67%] Building CXX object CMakeFiles/toppic.dir/src/visual/anno_proteoform.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/visual/anno_proteoform.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_proteoform.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp: In copy constructor ‘toppic::Envelope::Envelope(toppic::Envelope&)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp:26:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 26 | Envelope::Envelope(Envelope &env): | ^~~~~~~~ [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/match_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/match_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env.cpp [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/match_env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/match_env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_filter.cpp [ 67%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/peak_cluster_score.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/peak_cluster_score.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster_score.cpp [ 67%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_cutoff_selector.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_cutoff_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_cutoff_selector.cpp [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/match_env_refine.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/match_env_refine.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_refine.cpp [ 67%] Building CXX object CMakeFiles/toppic.dir/src/visual/anno_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/visual/anno_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_prsm.cpp [ 67%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/match_env_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/match_env_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp [ 68%] Building CXX object 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-I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_fdr.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_fdr.cpp [ 68%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/sample_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 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-I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/visual/anno_ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_ptm.cpp [ 68%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/sample_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/sample_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_writer.cpp [ 68%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_feature_cluster.cpp [ 68%] Building CXX object CMakeFiles/toppic.dir/src/visual/anno_ptm_position.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/visual/anno_ptm_position.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_ptm_position.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MatchEnvPtrVec toppic::match_env_util::addLowMassPeak(toppic::MatchEnvPtrVec&, toppic::PeakPtrVec&, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 68%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/savitzky_golay.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/savitzky_golay.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/savitzky_golay.cpp [ 68%] Building CXX object CMakeFiles/toppic.dir/src/visual/anno_residue.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/visual/anno_residue.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_residue.cpp [ 69%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/match_env_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/match_env_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/visual/anno_residue.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::AnnoResiduePtrVec toppic::AnnoResidue::getAnnoResidues(toppic::ProteoformPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 69%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/prec_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/prec_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/prec_env.cpp [ 69%] Building CXX object CMakeFiles/toppic.dir/src/visual/anno_xml_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/visual/anno_xml_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_xml_util.cpp [ 69%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/single_charge_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/single_charge_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/single_charge_feature.cpp [ 69%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_form_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_form_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_form_filter.cpp [ 69%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/spec_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/spec_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp: In constructor ‘toppic::SpecFeature::SpecFeature(toppic::MsHeaderPtr, toppic::FracFeaturePtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp:63:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 63 | SpecFeature::SpecFeature(MsHeaderPtr header, FracFeaturePtr feature) { | ^~~~~~~~~~~ [ 69%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/env/real_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/env/real_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp [ 69%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/spec_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/spec_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_reader.cpp [ 69%] Building CXX object CMakeFiles/toppic.dir/src/visual/json_transformer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/visual/json_transformer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/json_transformer.cpp [ 69%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_para.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp: In constructor ‘toppic::RealEnv::RealEnv(const PeakPtrVec&, toppic::EnvelopePtr, double, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp:25:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 25 | RealEnv::RealEnv(const PeakPtrVec &peak_list, EnvelopePtr theo_env, | ^~~~~~~ [ 69%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/feature_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/feature_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/feature_merge.cpp [ 69%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/spec_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/spec_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_writer.cpp [ 69%] Building CXX object CMakeFiles/topmg.dir/src/prsm/extreme_value.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/extreme_value.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/extreme_value.cpp [ 69%] Building CXX object CMakeFiles/topmg.dir/src/prsm/mass_shift_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/mass_shift_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/mass_shift_str.cpp [ 69%] Building CXX object CMakeFiles/topmg.dir/src/prsm/peak_ion_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/peak_ion_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/peak_ion_pair.cpp [ 69%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_prob.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_prob.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_prob.cpp [ 69%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/frac_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/frac_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp [ 69%] Building CXX object CMakeFiles/topmg.dir/src/prsm/peak_ion_pair_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/peak_ion_pair_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/peak_ion_pair_util.cpp [ 69%] Building CXX object CMakeFiles/toppic.dir/src/visual/xml_generator.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/visual/xml_generator.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/xml_generator.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::FracFeature::FracFeature(toppic::XmlDOMElement*)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 69%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.cpp [ 69%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/frac_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/frac_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_cluster.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtr toppic::PrsmReader::readOnePrsm(toppic::FastaIndexReaderPtr, toppic::ModPtrVec)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 69%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/frac_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/frac_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_reader.cpp [ 69%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_index_reader.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/visual/xml_generator.cpp:24: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::XmlGenerator::XmlGenerator(toppic::PrsmParaPtr, const string&, const string&, const string&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 70%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_sample_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_sample_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_sample_merge.cpp [ 70%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/frac_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/frac_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_writer.cpp /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp: In copy constructor ‘toppic::Prsm::Prsm(const toppic::Prsm&)’: /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp:51:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 51 | Prsm::Prsm(const Prsm &obj) { | ^~~~ [ 70%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/frac_xml_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui 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CMakeFiles/toppic.dir/src/visual/anno_prsm.cpp.o CMakeFiles/toppic.dir/src/visual/anno_ptm.cpp.o CMakeFiles/toppic.dir/src/visual/anno_ptm_position.cpp.o CMakeFiles/toppic.dir/src/visual/anno_residue.cpp.o CMakeFiles/toppic.dir/src/visual/anno_xml_util.cpp.o CMakeFiles/toppic.dir/src/visual/json_transformer.cpp.o CMakeFiles/toppic.dir/src/visual/xml_generator.cpp.o -o ../bin/toppic -lxerces-c -lboost_program_options -lboost_filesystem -lboost_system -lboost_thread -lpthread -lz -lhts [ 72%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_stat.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_stat.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_stat.cpp [ 72%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_coverage.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_coverage.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_coverage.cpp make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 72%] Built target toppic make -f CMakeFiles/topmg_gui.dir/build.make CMakeFiles/topmg_gui.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 72%] Automatic RCC for src/gui/topmg/icon.qrc /usr/bin/cmake -E cmake_autorcc /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/AutoRcc_icon_OBJ2MOUSMQ_Info.json release AutoRcc: Generating "SRC:/obj-powerpc64le-linux-gnu/topmg_gui_autogen/OBJ2MOUSMQ/qrc_icon.cpp", because it doesn't exist, from "SRC:/src/gui/topmg/icon.qrc" /usr/lib/qt5/bin/rcc -name icon -o /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/OBJ2MOUSMQ/qrc_icon.cpp /<>/toppic-1.3.0+dfsg1/src/gui/topmg/icon.qrc AutoRcc: Writing settings file "SRC:/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/AutoRcc_icon_OBJ2MOUSMQ_Used.txt" cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui.dir/DependInfo.cmake --color= Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui.dir/DependInfo.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui.dir/depend.internal". Dependee "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui.dir/depend.internal". Scanning dependencies of target topmg_gui make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topmg_gui.dir/build.make CMakeFiles/topmg_gui.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 72%] Building CXX object CMakeFiles/topmg_gui.dir/topmg_gui_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/topmg_gui_autogen/mocs_compilation.cpp.o -c /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/mocs_compilation.cpp [ 72%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/peak_cluster_score.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/peak_cluster_score.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster_score.cpp [ 72%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp [ 72%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_cutoff_selector.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_cutoff_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_cutoff_selector.cpp [ 72%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/sample_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/sample_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp:22: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::PrsmStr::PrsmStr(const std::vector >&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 72%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/sample_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/sample_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_reader.cpp [ 72%] Building CXX object CMakeFiles/topmg_gui.dir/src/gui/topmg/threadtopmg.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/gui/topmg/threadtopmg.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/topmg/threadtopmg.cpp [ 72%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_fdr.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_fdr.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_fdr.cpp [ 72%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/sample_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/sample_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_writer.cpp [ 72%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_str_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_str_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str_merge.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/savitzky_golay.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/savitzky_golay.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/savitzky_golay.cpp [ 73%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_feature_cluster.cpp [ 73%] Building CXX object CMakeFiles/topmg_gui.dir/src/gui/topmg/topmg_gui.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/gui/topmg/topmg_gui.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/topmg/topmg_gui.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/single_charge_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/single_charge_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/single_charge_feature.cpp [ 73%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_table_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_table_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_table_writer.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/spec_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/spec_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp: In constructor ‘toppic::SpecFeature::SpecFeature(toppic::MsHeaderPtr, toppic::FracFeaturePtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp:63:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 63 | SpecFeature::SpecFeature(MsHeaderPtr header, FracFeaturePtr feature) { | ^~~~~~~~~~~ [ 73%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_form_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_form_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_form_filter.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/spec_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/spec_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_reader.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/spec_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/spec_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_writer.cpp /<>/toppic-1.3.0+dfsg1/src/gui/topmg/topmg_gui.cpp: In function ‘int main(int, char**)’: /<>/toppic-1.3.0+dfsg1/src/gui/topmg/topmg_gui.cpp:36:44: warning: ‘const QRect QDesktopWidget::availableGeometry(int) const’ is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 36 | QRect deskRect = desk->availableGeometry(); | ^ In file included from /usr/include/powerpc64le-linux-gnu/qt5/QtWidgets/QDesktopWidget:1, from /<>/toppic-1.3.0+dfsg1/src/gui/topmg/topmg_gui.cpp:18: /usr/include/powerpc64le-linux-gnu/qt5/QtWidgets/qdesktopwidget.h:88:67: note: declared here 88 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect availableGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~~~~ [ 73%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_para.cpp [ 73%] Building CXX object CMakeFiles/topmg_gui.dir/src/gui/topmg/topmgwindow.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/gui/topmg/topmgwindow.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/gui/topmg/topmgwindow.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/extreme_value.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/extreme_value.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/extreme_value.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/mass_shift_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/mass_shift_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/mass_shift_str.cpp [ 73%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_top_selector.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_top_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_top_selector.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/peak_ion_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/peak_ion_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/peak_ion_pair.cpp [ 73%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_prob.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_prob.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_prob.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/peak_ion_pair_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/peak_ion_pair_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/peak_ion_pair_util.cpp [ 73%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.cpp [ 73%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtr toppic::PrsmReader::readOnePrsm(toppic::FastaIndexReaderPtr, toppic::ModPtrVec)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp [ 73%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_sample_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_sample_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_sample_merge.cpp [ 73%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer.cpp /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp: In copy constructor ‘toppic::Prsm::Prsm(const toppic::Prsm&)’: /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp:51:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 51 | Prsm::Prsm(const Prsm &obj) { | ^~~~ [ 73%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_xml_writer_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_set.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_algo.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_algo.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_algo.cpp [ 73%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_simple_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_simple_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_simple_cluster.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_cluster.cpp [ 74%] Building CXX object CMakeFiles/topmg_gui.dir/src/console/topmg_argument.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/console/topmg_argument.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topmg_argument.cpp [ 74%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_util.cpp [ 74%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm.cpp [ 74%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_stat.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_stat.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_stat.cpp [ 74%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_coverage.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_coverage.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_coverage.cpp [ 74%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_reader.cpp [ 74%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_str.cpp In file included from /usr/include/boost/program_options/parsers.hpp:295, from /usr/include/boost/program_options.hpp:17, from /<>/toppic-1.3.0+dfsg1/src/console/topmg_argument.hpp:26, from /<>/toppic-1.3.0+dfsg1/src/console/topmg_argument.cpp:31: /usr/include/boost/program_options/detail/parsers.hpp: In member function ‘boost::program_options::basic_parsed_options boost::program_options::basic_command_line_parser::run() [with charT = char]’: /usr/include/boost/program_options/detail/parsers.hpp:90:5: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 90 | basic_command_line_parser::run() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_str_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_str_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_str_merge.cpp [ 75%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp:22: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::PrsmStr::PrsmStr(const std::vector >&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 75%] Building CXX object CMakeFiles/topmg_gui.dir/src/console/topmg_process.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/console/topmg_process.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/console/topmg_process.cpp [ 75%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_cutoff_selector.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_cutoff_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_cutoff_selector.cpp [ 75%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_table_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_table_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_table_writer.cpp [ 75%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_util.cpp [ 75%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_str_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_str_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str_merge.cpp [ 76%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_fdr.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_fdr.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_fdr.cpp [ 76%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer.cpp [ 77%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_table_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_table_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_table_writer.cpp [ 77%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_set.cpp [ 77%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_feature_cluster.cpp [ 77%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_util.cpp [ 77%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/theo_peak_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/theo_peak_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp [ 77%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_form_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_form_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_form_filter.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::TheoPeakPtrVec toppic::theo_peak_util::geneTheoPeak(toppic::BpSpecPtr, toppic::ActivationPtr, toppic::NeutralLossPtr, double, double, int, int, double, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 77%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_top_selector.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_top_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_top_selector.cpp [ 77%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/diag/diag_filter_mng.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/diag/diag_filter_mng.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_mng.cpp [ 77%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_para.cpp [ 77%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/diag/diag_filter_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/diag/diag_filter_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_processor.cpp [ 77%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.cpp [ 77%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_prob.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_prob.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_prob.cpp [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/activation.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/activation.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation.cpp [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/activation_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/activation_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.cpp [ 77%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_processor.cpp:18: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::DiagFilterProcessor::processBlock(toppic::DbBlockPtr, int, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/amino_acid.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/amino_acid.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.cpp [ 77%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer.cpp [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/amino_acid_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/amino_acid_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtr toppic::PrsmReader::readOnePrsm(toppic::FastaIndexReaderPtr, toppic::ModPtrVec)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 77%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/diag/mass_diag_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/diag/mass_diag_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/mass_diag_filter.cpp [ 77%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_xml_writer_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_set.cpp [ 77%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_sample_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_sample_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_sample_merge.cpp [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/base_data.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/base_data.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/base_data.cpp [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/ion.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/ion.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion.cpp [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/ion_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/ion_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.cpp [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/ion_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/ion_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type_base.cpp [ 77%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_util.cpp [ 77%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/massmatch/filter_protein.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/massmatch/filter_protein.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/filter_protein.cpp [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod.cpp [ 77%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_simple_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_simple_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_simple_cluster.cpp [ 77%] Building CXX object CMakeFiles/topmg.dir/src/prsm/simple_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/simple_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm.cpp [ 77%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/massmatch/mass_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/massmatch/mass_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match.cpp [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ModPtr toppic::ModBase::getBaseModPtr(toppic::ResiduePtr, toppic::ResiduePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 77%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/massmatch/mass_match_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/massmatch/mass_match_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match_factory.cpp [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp [ 77%] Building CXX object CMakeFiles/topmg.dir/src/prsm/simple_prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/simple_prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_reader.cpp [ 77%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_stat.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_stat.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_stat.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.cpp:24: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘std::vector > > toppic::mod_util::readModTxt(const string&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 77%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/massmatch/mass_match_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/massmatch/mass_match_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match_util.cpp [ 77%] Building CXX object CMakeFiles/topmg.dir/src/prsm/simple_prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/simple_prsm_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_str.cpp [ 77%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/neutral_loss.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/neutral_loss.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.cpp [ 78%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/neutral_loss_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/neutral_loss_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.cpp [ 79%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/oneptm/mass_one_ptm_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/oneptm/mass_one_ptm_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/mass_one_ptm_filter.cpp [ 79%] Building CXX object CMakeFiles/topmg.dir/src/prsm/simple_prsm_str_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/simple_prsm_str_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_str_merge.cpp [ 79%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/prot_mod.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/prot_mod.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod.cpp [ 79%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/prot_mod_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/prot_mod_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/mass_one_ptm_filter.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::MassOnePtmFilter::computeBestMatch(const PrmMsPtrVec&, const PrmMsPtrVec&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 79%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/prot_mod_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/prot_mod_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod_util.cpp [ 79%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/oneptm/one_ptm_filter_mng.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/oneptm/one_ptm_filter_mng.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_mng.cpp [ 79%] Building CXX object CMakeFiles/topmg.dir/src/prsm/simple_prsm_table_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/simple_prsm_table_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_table_writer.cpp [ 79%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/ptm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.cpp [ 79%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/oneptm/one_ptm_filter_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/oneptm/one_ptm_filter_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_processor.cpp [ 79%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp [ 79%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/ptm_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/ptm_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_base.cpp [ 79%] Building CXX object CMakeFiles/topmg.dir/src/prsm/simple_prsm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/simple_prsm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_util.cpp [ 79%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/ptm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/ptm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp:22: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::PrsmStr::PrsmStr(const std::vector >&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 79%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/residue.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/residue.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue.cpp [ 79%] Building CXX object CMakeFiles/topmg.dir/src/prsm/simple_prsm_xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/simple_prsm_xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer.cpp [ 79%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/residue_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/residue_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp [ 79%] Building CXX object CMakeFiles/topmg.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_set.cpp [ 79%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_str_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_str_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str_merge.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /usr/include/boost/system/detail/std_interoperability.hpp:12, from /usr/include/boost/system/error_code.hpp:963, from /usr/include/boost/system/system_error.hpp:11, from /usr/include/boost/thread/exceptions.hpp:22, from /usr/include/boost/thread/pthread/thread_data.hpp:10, from /usr/include/boost/thread/thread_only.hpp:17, from /usr/include/boost/thread/thread.hpp:12, from /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_processor.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::filterBlock(const ProteoformPtrVec&, const string&, toppic::OnePtmFilterMngPtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_base.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ResiduePtr toppic::ResidueBase::getBaseResiduePtr(toppic::AminoAcidPtr, toppic::PtmPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 79%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/residue_freq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/residue_freq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_freq.cpp [ 80%] Building CXX object CMakeFiles/topmg.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_util.cpp [ 80%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/residue_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/residue_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.cpp [ 80%] Building CXX object CMakeFiles/topmg.dir/src/prsm/theo_peak_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/theo_peak_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp [ 80%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/support_peak_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/support_peak_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.cpp [ 80%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/zeroptm/mass_zero_ptm_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/zeroptm/mass_zero_ptm_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/zeroptm/mass_zero_ptm_filter.cpp [ 80%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/support_peak_type_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/support_peak_type_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.cpp [ 80%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_table_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_table_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_table_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::TheoPeakPtrVec toppic::theo_peak_util::geneTheoPeak(toppic::BpSpecPtr, toppic::ActivationPtr, toppic::NeutralLossPtr, double, double, int, int, double, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 80%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/trunc.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/trunc.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/filter/zeroptm/mass_zero_ptm_filter.cpp:16: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::MassZeroPtmFilter::computeBestMatch(const ExtendMsPtrVec&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 80%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/trunc_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/trunc_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_base.cpp [ 80%] Building CXX object CMakeFiles/topmg.dir/src/filter/diag/diag_filter_mng.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/filter/diag/diag_filter_mng.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_mng.cpp [ 80%] Building CXX object CMakeFiles/topmg.dir/src/filter/diag/diag_filter_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/filter/diag/diag_filter_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_processor.cpp [ 80%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/zeroptm/zero_ptm_filter_mng.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/zeroptm/zero_ptm_filter_mng.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/zeroptm/zero_ptm_filter_mng.cpp [ 81%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/base/trunc_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/base/trunc_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/base/trunc_util.cpp [ 81%] Building CXX object CMakeFiles/toppic_gui.dir/src/filter/zeroptm/zero_ptm_filter_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/filter/zeroptm/zero_ptm_filter_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/zeroptm/zero_ptm_filter_processor.cpp [ 81%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/thread/simple_thread_pool.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/thread/simple_thread_pool.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.cpp [ 81%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_top_selector.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_top_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_top_selector.cpp [ 81%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_processor.cpp:18: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::DiagFilterProcessor::processBlock(toppic::DbBlockPtr, int, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 81%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/util/file_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/util/file_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/file_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /usr/include/boost/system/detail/std_interoperability.hpp:12, from /usr/include/boost/system/error_code.hpp:963, from /usr/include/boost/system/system_error.hpp:11, from /usr/include/boost/thread/exceptions.hpp:22, from /usr/include/boost/thread/pthread/thread_data.hpp:10, from /usr/include/boost/thread/thread_only.hpp:17, from /usr/include/boost/thread/thread.hpp:12, from /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/filter/zeroptm/zero_ptm_filter_processor.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::filterBlock(const ProteoformPtrVec&, const string&, toppic::ZeroPtmFilterMngPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 81%] Building CXX object CMakeFiles/topmg.dir/src/filter/diag/mass_diag_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/filter/diag/mass_diag_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/mass_diag_filter.cpp [ 81%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/zeroptmsearch/zero_ptm_fast_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/zeroptmsearch/zero_ptm_fast_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_fast_match.cpp [ 81%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/util/logger.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/util/logger.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/logger.cpp [ 81%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/util/str_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/util/str_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/str_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_fast_match.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_fast_match.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::ZpFastMatchPtrVec toppic::ZeroPtmFastMatch::filter(toppic::ProteoformTypePtr, const ExtendMsPtrVec&, const ProteoformPtrVec&, int, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 81%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer.cpp [ 81%] Building CXX object CMakeFiles/topmg.dir/src/filter/massmatch/filter_protein.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/filter/massmatch/filter_protein.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/filter_protein.cpp [ 81%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/zeroptmsearch/zero_ptm_search_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/zeroptmsearch/zero_ptm_search_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_search_processor.cpp [ 81%] Building CXX object CMakeFiles/topmg.dir/src/filter/massmatch/mass_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/filter/massmatch/mass_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match.cpp [ 82%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_xml_writer_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_set.cpp [ 82%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/util/time_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/util/time_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/util/time_util.cpp [ 82%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/xml/xml_dom_document.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/xml/xml_dom_document.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_document.cpp [ 82%] Building CXX object CMakeFiles/topmg.dir/src/filter/massmatch/mass_match_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/filter/massmatch/mass_match_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match_factory.cpp [ 82%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/xml/xml_dom_err_handler.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/xml/xml_dom_err_handler.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_err_handler.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_search_processor.cpp:23: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtrVec toppic::ZeroPtmSearchProcessor::zeroPtmSearchOneSpec(toppic::SpectrumSetPtr, const SimplePrsmPtrVec&, toppic::FastaIndexReaderPtr, toppic::ZeroPtmSearchMngPtr, toppic::ProteoformTypePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 82%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/xml/xml_dom_impl.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/xml/xml_dom_impl.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_impl.cpp [ 82%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_util.cpp [ 82%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/xml/xml_dom_parser.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/xml/xml_dom_parser.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_parser.cpp [ 82%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/xml/xml_dom_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/xml/xml_dom_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_util.cpp [ 82%] Building CXX object CMakeFiles/topmg.dir/src/filter/massmatch/mass_match_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/filter/massmatch/mass_match_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match_util.cpp [ 82%] Building CXX object CMakeFiles/topmg_gui.dir/src/common/xml/xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/common/xml/xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/common/xml/xml_writer.cpp [ 82%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm.cpp [ 82%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/zeroptmsearch/zero_ptm_slow_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/zeroptmsearch/zero_ptm_slow_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_slow_match.cpp [ 82%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/alter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/alter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter.cpp [ 82%] Building CXX object CMakeFiles/topmg.dir/src/filter/oneptm/mass_one_ptm_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/filter/oneptm/mass_one_ptm_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/mass_one_ptm_filter.cpp [ 82%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/alter_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/alter_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/alter_type.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_slow_match.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtr toppic::ZeroPtmSlowMatch::geneResult()’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 82%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_reader.cpp [ 83%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/bp_spec.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/bp_spec.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/mass_one_ptm_filter.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::MassOnePtmFilter::computeBestMatch(const PrmMsPtrVec&, const PrmMsPtrVec&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 83%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/basic_diag_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/basic_diag_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/basic_diag_pair.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/break_point.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::BpSpec::initBreakPoints(const ResSeqPtr&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 83%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/break_point.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/break_point.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/break_point.cpp [ 83%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_str.cpp [ 83%] Building CXX object CMakeFiles/topmg.dir/src/filter/oneptm/one_ptm_filter_mng.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/filter/oneptm/one_ptm_filter_mng.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_mng.cpp [ 83%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/db_block.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/db_block.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/db_block.cpp [ 83%] Building CXX object CMakeFiles/topmg.dir/src/filter/oneptm/one_ptm_filter_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/filter/oneptm/one_ptm_filter_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_processor.cpp [ 83%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/fasta_index_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/fasta_index_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_index_reader.cpp [ 83%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_str_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_str_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_str_merge.cpp [ 83%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/fasta_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/fasta_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_reader.cpp [ 83%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/diagonal.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/diagonal.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal.cpp [ 83%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/fasta_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/fasta_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.cpp [ 83%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/fasta_sub_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/fasta_sub_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.cpp [ 83%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_table_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_table_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_table_writer.cpp [ 83%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/fasta_sub_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/fasta_sub_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::FastaSubSeqPtrVec toppic::fasta_sub_util::breakSeq(toppic::FastaSeqPtr, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /usr/include/boost/system/detail/std_interoperability.hpp:12, from /usr/include/boost/system/error_code.hpp:963, from /usr/include/boost/system/system_error.hpp:11, from /usr/include/boost/thread/exceptions.hpp:22, from /usr/include/boost/thread/pthread/thread_data.hpp:10, from /usr/include/boost/thread/thread_only.hpp:17, from /usr/include/boost/thread/thread.hpp:12, from /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_processor.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::filterBlock(const ProteoformPtrVec&, const string&, toppic::OnePtmFilterMngPtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 83%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/fasta_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/fasta_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp [ 83%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/diagonal_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/diagonal_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp [ 83%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_util.cpp /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /<>/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp: In member function ‘toppic::DiagonalHeaderPtr toppic::DiagonalHeader::clone()’: /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp:27:19: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 27 | DiagonalHeaderPtr DiagonalHeader::clone() { | ^~~~~~~~~~~~~~ [ 83%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/local_anno.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/local_anno.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/local_anno.cpp [ 83%] Building CXX object CMakeFiles/topmg.dir/src/search/oneptmsearch/basic_diag_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/oneptmsearch/basic_diag_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/basic_diag_pair.cpp [ 83%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header_util.cpp [ 83%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer.cpp [ 83%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/mass_shift.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/mass_shift.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp [ 83%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/dp_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/dp_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.cpp [ 83%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_set.cpp In file included from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp:20: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp: In constructor ‘toppic::MassShift::MassShift(toppic::AlterPtr)’: /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:38:30: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 38 | int getLeftBpPos() {return left_bp_pos_;} | ^~~~~~~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/pair.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::DPPair::DPPair(int, int, double, double, int, int, toppic::DiagonalHeaderPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 84%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/one_ptm_search_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/one_ptm_search_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/one_ptm_search_processor.cpp [ 84%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/proteoform.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/proteoform.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.cpp [ 84%] Building CXX object CMakeFiles/topmg.dir/src/search/oneptmsearch/diagonal.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/oneptmsearch/diagonal.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal.cpp [ 84%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_util.cpp [ 84%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/theo_peak_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/theo_peak_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::TheoPeakPtrVec toppic::theo_peak_util::geneTheoPeak(toppic::BpSpecPtr, toppic::ActivationPtr, toppic::NeutralLossPtr, double, double, int, int, double, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 84%] Building CXX object CMakeFiles/topmg.dir/src/search/oneptmsearch/diagonal_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/oneptmsearch/diagonal_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp [ 84%] Building CXX object CMakeFiles/topdiff_gui.dir/src/merge/feature_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/merge/feature_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/merge/feature_prsm.cpp [ 84%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/proteoform_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/proteoform_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp In file included from /<>/toppic-1.3.0+dfsg1/src/merge/feature_prsm.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/merge/feature_prsm.cpp:16: /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.hpp: In member function ‘void toppic::FeaturePrsm::addPrsmInfo(toppic::PrsmStrPtr)’: /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.hpp:44:39: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 44 | int getProteoformStartPos() {return proteoform_start_pos_;} | ^~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/one_ptm_slow_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/one_ptm_slow_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/one_ptm_slow_match.cpp [ 84%] Building CXX object CMakeFiles/topdiff_gui.dir/src/merge/feature_prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/merge/feature_prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/merge/feature_prsm_reader.cpp /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp: In member function ‘toppic::DiagonalHeaderPtr toppic::DiagonalHeader::clone()’: /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp:27:19: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 27 | DiagonalHeaderPtr DiagonalHeader::clone() { | ^~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/topmg.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header_util.cpp [ 86%] Building CXX object CMakeFiles/topdiff_gui.dir/src/merge/feature_sample_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topdiff_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 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-I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/oneptmsearch/dp_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/pair.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::DPPair::DPPair(int, int, double, double, int, int, toppic::DiagonalHeaderPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 86%] Building CXX object CMakeFiles/topmg.dir/src/search/oneptmsearch/one_ptm_search_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/oneptmsearch/one_ptm_search_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/one_ptm_search_processor.cpp [ 86%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/ps_align.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. 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CMakeFiles/topmg_gui.dir/src/seq/proteoform_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/ps_align.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtr toppic::PSAlign::geneResult(int, toppic::ProteoformPtr, toppic::DeconvMsPtrVec&, toppic::ExtendMsPtrVec&, toppic::PrsmParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ProteoformPtr toppic::proteoform_util::geneDbProteoformPtr(toppic::FastaSubSeqPtr, toppic::ModPtrVec, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 87%] Building CXX object CMakeFiles/topdiff_gui.dir/topdiff_gui_autogen/4YKSSMFELI/qrc_icon.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu 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CMakeFiles/topdiff_gui.dir/src/prsm/prsm_table_writer.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_top_selector.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_util.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_xml_writer.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_xml_writer_set.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/prsm_xml_writer_util.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_reader.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_str.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_str_merge.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_table_writer.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_util.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_xml_writer.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o CMakeFiles/topdiff_gui.dir/src/prsm/theo_peak_util.cpp.o CMakeFiles/topdiff_gui.dir/src/merge/feature_prsm.cpp.o CMakeFiles/topdiff_gui.dir/src/merge/feature_prsm_reader.cpp.o CMakeFiles/topdiff_gui.dir/src/merge/feature_sample_merge.cpp.o CMakeFiles/topdiff_gui.dir/topdiff_gui_autogen/4YKSSMFELI/qrc_icon.cpp.o -o ../bin/topdiff_gui -lQt5Widgets -lQt5Core -lQt5Gui -lxerces-c -lboost_program_options -lboost_filesystem -lboost_system -lboost_thread -lboost_iostreams -lpthread -lz -lhts [ 87%] Building CXX object CMakeFiles/topmg.dir/src/search/oneptmsearch/one_ptm_slow_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/oneptmsearch/one_ptm_slow_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/one_ptm_slow_match.cpp [ 87%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/residue_seq.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/residue_seq.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/seq/residue_seq.cpp [ 87%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/ptmsearch/comp_shift_low_mem.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall 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CMakeFiles/topmg.dir/src/search/oneptmsearch/ps_align.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/oneptmsearch/ps_align.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/ps_align.cpp [ 87%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/deconv_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/deconv_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms_util.cpp [ 87%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/deconv_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/deconv_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.cpp [ 87%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/ptmsearch/ptm_slow_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/ptmsearch/ptm_slow_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/ptmsearch/ptm_slow_match.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/ps_align.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtr toppic::PSAlign::geneResult(int, toppic::ProteoformPtr, toppic::DeconvMsPtrVec&, toppic::ExtendMsPtrVec&, toppic::PrsmParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 87%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/env_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/env_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.cpp [ 87%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/extend_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/extend_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms.cpp [ 87%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/extend_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/extend_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp [ 87%] Building CXX object CMakeFiles/toppic_gui.dir/src/stat/tdgf/comp_prob_value.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/stat/tdgf/comp_prob_value.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_prob_value.cpp [ 87%] Building CXX object CMakeFiles/topmg.dir/src/search/graph/dist.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graph/dist.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/dist.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/prot_mod.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/ptmsearch/ptm_search_processor.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In lambda function: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::ExtendMsPtrVec toppic::extend_ms_factory::geneMsThreePtrVec(const DeconvMsPtrVec&, toppic::SpParaPtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 87%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/extend_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/extend_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/extend_peak.cpp In file included from /usr/include/c++/10/vector:72, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_prob_value.cpp:20: /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const toppic::ProbPeak&}; _Tp = toppic::ProbPeak; _Alloc = std::allocator]’: /usr/include/c++/10/bits/vector.tcc:426:7: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/ms_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/ms_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp [ 87%] Building CXX object CMakeFiles/toppic_gui.dir/src/stat/tdgf/comp_pvalue_array.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/stat/tdgf/comp_pvalue_array.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_array.cpp /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp: In static member function ‘static toppic::MsHeaderPtr toppic::MsHeader::geneMsHeaderPtr(toppic::MsHeaderPtr, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp:169:13: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 169 | MsHeaderPtr MsHeader::geneMsHeaderPtr(MsHeaderPtr ori_ptr, double new_prec_mass) { | ^~~~~~~~ [ 87%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_frac_merge.cpp [ 87%] Building CXX object CMakeFiles/toppic_gui.dir/src/stat/tdgf/comp_pvalue_lookup_table.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/stat/tdgf/comp_pvalue_lookup_table.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.cpp [ 88%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/msalign_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/msalign_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp [ 88%] Building CXX object CMakeFiles/topmg.dir/src/search/graph/proteo_anno.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graph/proteo_anno.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/proteo_anno.cpp [ 88%] Building CXX object CMakeFiles/toppic_gui.dir/src/stat/tdgf/count_test_num.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/stat/tdgf/count_test_num.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/count_test_num.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_para.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/tdgf_mng.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.cpp:23: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::CompPValueLookupTable::CompPValueLookupTable(toppic::TdgfMngPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 88%] Building CXX object CMakeFiles/toppic_gui.dir/src/stat/tdgf/evalue_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/stat/tdgf/evalue_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/evalue_processor.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ion_type.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/activation_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_reader.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘std::vector > toppic::MsAlignReader::getNextSpectrumSet(toppic::SpParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 88%] Building CXX object CMakeFiles/topmg.dir/src/search/graph/proteo_graph.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graph/proteo_graph.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/proteo_graph.cpp [ 88%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/msalign_thread_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/msalign_thread_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_thread_merge.cpp [ 88%] Building CXX object CMakeFiles/toppic_gui.dir/src/stat/tdgf/tdgf_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/stat/tdgf/tdgf_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/tdgf_util.cpp [ 88%] Building CXX object CMakeFiles/toppic_gui.dir/src/stat/local/local_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/stat/local/local_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/local/local_processor.cpp [ 88%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/msalign_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/msalign_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_util.cpp [ 88%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/msalign_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/msalign_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/msalign_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/evalue_processor.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::EValueProcessor::init()’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 88%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.cpp [ 88%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/peak_tolerance.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/peak_tolerance.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.cpp [ 88%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/prm_ms.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/prm_ms.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp [ 88%] Building CXX object CMakeFiles/topmg.dir/src/search/graph/proteo_graph_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graph/proteo_graph_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/proteo_graph_reader.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/local/local_processor.cpp:23: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::LocalProcessor::compOnePtmScr(toppic::ProteoformPtr, const ExtendMsPtrVec&, std::vector&, double&, toppic::PtmPtrVec&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak_tolerance.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::PrmPeakPtrVec toppic::prm_ms::getPrmPeakPtrs(const PrmMsPtrVec&, toppic::PeakTolerancePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 88%] Building CXX object CMakeFiles/topmg.dir/src/search/graph/spec_graph.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graph/spec_graph.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/spec_graph.cpp [ 88%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/prm_ms_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/prm_ms_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms_factory.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::prm_ms_factory::addSixMasses(toppic::PrmPeakPtrVec&, int, toppic::DeconvPeakPtr, double, toppic::ActivationPtr, toppic::PeakTolerancePtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 88%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/prm_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/prm_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp [ 89%] Building CXX object CMakeFiles/toppic_gui.dir/src/stat/local/local_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/stat/local/local_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/local/local_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::PrmPeak::addNghbEdge(toppic::DeconvPeakPtr, double, toppic::SPTypePtr, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 89%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/prm_peak_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/prm_peak_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.cpp [ 89%] Building CXX object CMakeFiles/topmg.dir/src/search/graph/spec_graph_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graph/spec_graph_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/spec_graph_reader.cpp [ 89%] Building CXX object CMakeFiles/topmg.dir/src/search/graphalign/graph_align.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graphalign/graph_align.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_align.cpp [ 89%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/raw_ms_group.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/raw_ms_group.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_group.cpp [ 89%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/raw_ms_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/raw_ms_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid_base.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/local/local_util.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MassShiftPtr toppic::local_util::geneMassShift(toppic::MassShiftPtr, double, toppic::AlterTypePtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 89%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/rm_break_type.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/rm_break_type.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/rm_break_type.cpp [ 89%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/sp_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/sp_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/sp_para.cpp [ 89%] Building CXX object CMakeFiles/toppic_gui.dir/src/visual/anno_cleavage.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/visual/anno_cleavage.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_cleavage.cpp [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/spectrum_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/spectrum_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/spectrum_set.cpp [ 90%] Building CXX object CMakeFiles/toppic_gui.dir/src/visual/anno_file_list.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/visual/anno_file_list.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_file_list.cpp [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/support_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/support_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/support_peak.cpp [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/theo_peak.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/theo_peak.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/spec/theo_peak.cpp [ 90%] Building CXX object CMakeFiles/toppic_gui.dir/src/visual/anno_mass_shift.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/visual/anno_mass_shift.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_mass_shift.cpp [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/charge_cmp.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/charge_cmp.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/charge_cmp.cpp [ 90%] Building CXX object CMakeFiles/toppic_gui.dir/src/visual/anno_proteoform.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/visual/anno_proteoform.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_proteoform.cpp [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/env_assign.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/env_assign.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_assign.cpp [ 90%] Building CXX object CMakeFiles/topmg.dir/src/search/graphalign/graph_align_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graphalign/graph_align_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_align_processor.cpp [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/env_base.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/env_base.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_align.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::GraphResultNodePtrVec toppic::GraphAlign::backtrace(int, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::EnvBase::EnvBase(std::string, int, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/env_detect.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/env_detect.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/env_detect.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::MatchEnvPtr toppic::EnvDetect::detectEnv(const PeakPtrVec&, int, int, double, toppic::EnvParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 90%] Building CXX object CMakeFiles/toppic_gui.dir/src/visual/anno_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/visual/anno_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_prsm.cpp [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_filter.cpp [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/env_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/env_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp [ 90%] Building CXX object CMakeFiles/topmg.dir/src/search/graphalign/graph_dp_node.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graphalign/graph_dp_node.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_dp_node.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp: In constructor ‘toppic::EnvPara::EnvPara(toppic::TopfdParaPtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/env_para.cpp:20:1: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5 20 | EnvPara::EnvPara(TopfdParaPtr topfd_para_ptr) { | ^~~~~~~ [ 90%] Building CXX object CMakeFiles/toppic_gui.dir/src/visual/anno_ptm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/visual/anno_ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_ptm.cpp [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/env_peak_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/env_peak_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_peak_pair.cpp [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/env_rescore.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/env_rescore.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/env_rescore.cpp [ 90%] Building CXX object CMakeFiles/toppic_gui.dir/src/visual/anno_ptm_position.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/visual/anno_ptm_position.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_ptm_position.cpp [ 90%] Building CXX object CMakeFiles/toppic_gui.dir/src/visual/anno_residue.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/visual/anno_residue.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_residue.cpp [ 90%] Building CXX object CMakeFiles/toppic_gui.dir/src/visual/anno_xml_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/visual/anno_xml_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_xml_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/visual/anno_residue.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::AnnoResiduePtrVec toppic::AnnoResidue::getAnnoResidues(toppic::ProteoformPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/envelope.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/envelope.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/match_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/match_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env.cpp /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_align_processor.cpp: In static member function ‘static bool std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_manager(std::_Any_data&, const std::_Any_data&, std::_Manager_operation) [with _Res = void; _Functor = toppic::geneTask(toppic::GraphAlignMngPtr, toppic::ModPtrVec, int, int)::; _ArgTypes = {}]’: /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_align_processor.cpp:49:54: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 49 | return [mng_ptr, var_mod_ptr_vec, spectrum_num, idx]() { | ^ [ 90%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/match_env_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/match_env_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_filter.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp: In copy constructor ‘toppic::Envelope::Envelope(toppic::Envelope&)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp:26:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 26 | Envelope::Envelope(Envelope &env): | ^~~~~~~~ [ 90%] Building CXX object CMakeFiles/toppic_gui.dir/src/visual/json_transformer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/visual/json_transformer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/json_transformer.cpp [ 90%] Building CXX object CMakeFiles/toppic_gui.dir/src/visual/xml_generator.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/visual/xml_generator.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/xml_generator.cpp [ 91%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/match_env_refine.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/match_env_refine.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_refine.cpp [ 91%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/match_env_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/match_env_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_index_reader.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/visual/xml_generator.cpp:24: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::XmlGenerator::XmlGenerator(toppic::PrsmParaPtr, const string&, const string&, const string&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 92%] Building CXX object CMakeFiles/topmg.dir/src/search/graphalign/graph_post_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graphalign/graph_post_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_post_processor.cpp [ 92%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/match_env_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/match_env_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::MatchEnvPtrVec toppic::match_env_util::addLowMassPeak(toppic::MatchEnvPtrVec&, toppic::PeakPtrVec&, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 92%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/prec_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/prec_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/prec_env.cpp [ 92%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/env/real_env.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/env/real_env.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp: In constructor ‘toppic::RealEnv::RealEnv(const PeakPtrVec&, toppic::EnvelopePtr, double, double)’: /<>/toppic-1.3.0+dfsg1/src/ms/env/real_env.cpp:25:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 25 | RealEnv::RealEnv(const PeakPtrVec &peak_list, EnvelopePtr theo_env, | ^~~~~~~ [ 92%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/feature_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/feature_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/feature_merge.cpp [ 92%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/frac_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/frac_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::FracFeature::FracFeature(toppic::XmlDOMElement*)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 92%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/frac_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/frac_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_cluster.cpp [ 92%] Building CXX object CMakeFiles/toppic_gui.dir/toppic_gui_autogen/23BTPJIYMA/qrc_icon.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/toppic_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security 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CMakeFiles/toppic_gui.dir/src/visual/anno_prsm.cpp.o CMakeFiles/toppic_gui.dir/src/visual/anno_ptm.cpp.o CMakeFiles/toppic_gui.dir/src/visual/anno_ptm_position.cpp.o CMakeFiles/toppic_gui.dir/src/visual/anno_residue.cpp.o CMakeFiles/toppic_gui.dir/src/visual/anno_xml_util.cpp.o CMakeFiles/toppic_gui.dir/src/visual/json_transformer.cpp.o CMakeFiles/toppic_gui.dir/src/visual/xml_generator.cpp.o CMakeFiles/toppic_gui.dir/toppic_gui_autogen/23BTPJIYMA/qrc_icon.cpp.o -o ../bin/toppic_gui -lQt5Widgets -lQt5Core -lQt5Gui -lxerces-c -lboost_program_options -lboost_filesystem -lboost_system -lboost_thread -lhts -lpthread -lz -lhts [ 92%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/frac_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 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-I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/peak_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster.cpp [ 92%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/peak_cluster_score.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 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[with _Args = {const toppic::ProbPeak&}; _Tp = toppic::ProbPeak; _Alloc = std::allocator]’: /usr/include/c++/10/bits/vector.tcc:426:7: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object CMakeFiles/topmg.dir/src/stat/tdgf/comp_pvalue_array.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/stat/tdgf/comp_pvalue_array.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_array.cpp make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 92%] Built target toppic_gui [ 92%] Building CXX object CMakeFiles/topmg.dir/src/stat/tdgf/comp_pvalue_lookup_table.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/stat/tdgf/comp_pvalue_lookup_table.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.cpp [ 92%] Building CXX object CMakeFiles/topmg.dir/src/stat/tdgf/count_test_num.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/stat/tdgf/count_test_num.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/count_test_num.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_para.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/tdgf_mng.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.cpp:23: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::CompPValueLookupTable::CompPValueLookupTable(toppic::TdgfMngPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 92%] Building CXX object CMakeFiles/topmg.dir/src/stat/tdgf/evalue_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/stat/tdgf/evalue_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/evalue_processor.cpp [ 92%] Building CXX object CMakeFiles/topmg.dir/src/stat/tdgf/tdgf_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/stat/tdgf/tdgf_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/tdgf_util.cpp [ 92%] Building CXX object CMakeFiles/topmg.dir/src/stat/mcmc/comp_pvalue_mcmc.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/stat/mcmc/comp_pvalue_mcmc.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/mcmc/comp_pvalue_mcmc.cpp [ 92%] Building CXX object CMakeFiles/topmg.dir/src/stat/mcmc/mcmc_dpr_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/stat/mcmc/mcmc_dpr_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/mcmc/mcmc_dpr_processor.cpp [ 92%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/sample_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/sample_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature.cpp [ 92%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/sample_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/sample_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_reader.cpp [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/sample_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/sample_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/evalue_processor.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::EValueProcessor::init()’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/mcmc/comp_pvalue_mcmc.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘double toppic::CompPValueMCMC::compOneProbMCMC(toppic::PrsmPtr, toppic::ActivationPtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/savitzky_golay.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/savitzky_golay.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/savitzky_golay.cpp [ 93%] Building CXX object CMakeFiles/topmg.dir/src/stat/mcmc/mcmc_mass_table_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/stat/mcmc/mcmc_mass_table_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/mcmc/mcmc_mass_table_util.cpp [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/single_charge_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/single_charge_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/single_charge_feature.cpp [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/spec_feature.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/spec_feature.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/spec_feature_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/spec_feature_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_reader.cpp /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp: In constructor ‘toppic::SpecFeature::SpecFeature(toppic::MsHeaderPtr, toppic::FracFeaturePtr)’: /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature.cpp:63:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 63 | SpecFeature::SpecFeature(MsHeaderPtr header, FracFeaturePtr feature) { | ^~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/feature/spec_feature_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/feature/spec_feature_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_writer.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/stat/mcmc/mcmc_dpr_processor.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::DprProcessor::init()’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/extreme_value.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/extreme_value.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/extreme_value.cpp [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/mass_shift_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/mass_shift_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/mass_shift_str.cpp [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/peak_ion_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/peak_ion_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/peak_ion_pair.cpp [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/peak_ion_pair_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/peak_ion_pair_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/peak_ion_pair_util.cpp [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp [ 93%] Building CXX object CMakeFiles/topmg.dir/src/visual/anno_cleavage.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/visual/anno_cleavage.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_cleavage.cpp [ 93%] Building CXX object CMakeFiles/topmg.dir/src/visual/anno_file_list.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/visual/anno_file_list.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_file_list.cpp /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp: In copy constructor ‘toppic::Prsm::Prsm(const toppic::Prsm&)’: /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.cpp:51:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 51 | Prsm::Prsm(const Prsm &obj) { | ^~~~ [ 93%] Building CXX object CMakeFiles/topmg.dir/src/visual/anno_mass_shift.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/visual/anno_mass_shift.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_mass_shift.cpp [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_algo.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_algo.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_algo.cpp [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_cluster.cpp [ 93%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_coverage.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_coverage.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_coverage.cpp [ 93%] Building CXX object CMakeFiles/topmg.dir/src/visual/anno_proteoform.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/visual/anno_proteoform.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_proteoform.cpp [ 94%] Building CXX object CMakeFiles/topmg.dir/src/visual/anno_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/visual/anno_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_prsm.cpp [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_cutoff_selector.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_cutoff_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_cutoff_selector.cpp [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_fdr.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_fdr.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_fdr.cpp [ 95%] Building CXX object CMakeFiles/topmg.dir/src/visual/anno_ptm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/visual/anno_ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_ptm.cpp [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_feature_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_feature_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_feature_cluster.cpp [ 95%] Building CXX object CMakeFiles/topmg.dir/src/visual/anno_ptm_position.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/visual/anno_ptm_position.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_ptm_position.cpp [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_form_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_form_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_form_filter.cpp [ 95%] Building CXX object CMakeFiles/topmg.dir/src/visual/anno_residue.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/visual/anno_residue.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_residue.cpp [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_para.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_para.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_para.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/visual/anno_residue.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::AnnoResiduePtrVec toppic::AnnoResidue::getAnnoResidues(toppic::ProteoformPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 95%] Building CXX object CMakeFiles/topmg.dir/src/visual/anno_xml_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/visual/anno_xml_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_xml_util.cpp [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_reader.cpp.o [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_prob.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.cpp /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_prob.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_prob.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_reader.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtr toppic::PrsmReader::readOnePrsm(toppic::FastaIndexReaderPtr, toppic::ModPtrVec)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_sample_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_sample_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_sample_merge.cpp [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_simple_cluster.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_simple_cluster.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_simple_cluster.cpp [ 95%] Building CXX object CMakeFiles/topmg.dir/src/visual/json_transformer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/visual/json_transformer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/json_transformer.cpp [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_stat.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_stat.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_stat.cpp [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_str.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_str_merge.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_str_merge.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str_merge.cpp [ 95%] Building CXX object CMakeFiles/topmg.dir/src/visual/xml_generator.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/visual/xml_generator.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/xml_generator.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_str.cpp:22: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::PrsmStr::PrsmStr(const std::vector >&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_table_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_table_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_table_writer.cpp [ 95%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_top_selector.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_top_selector.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_top_selector.cpp [ 96%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_index_reader.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/visual/xml_generator.cpp:24: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::XmlGenerator::XmlGenerator(toppic::PrsmParaPtr, const string&, const string&, const string&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 96%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_xml_writer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_xml_writer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer.cpp [ 96%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_xml_writer_set.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_set.cpp [ 96%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_xml_writer_util.cpp [ 96%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/simple_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/simple_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm.cpp [ 96%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/simple_prsm_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/simple_prsm_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_reader.cpp [ 96%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/simple_prsm_str.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/simple_prsm_str.cpp.o -c 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-I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_util.cpp [ 96%] Building CXX object CMakeFiles/topmg_gui.dir/src/prsm/theo_peak_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/prsm/theo_peak_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 96%] Built target topmg [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/filter/diag/diag_filter_mng.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/filter/diag/diag_filter_mng.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_mng.cpp [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/filter/diag/diag_filter_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/filter/diag/diag_filter_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_processor.cpp [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/filter/diag/mass_diag_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/filter/diag/mass_diag_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/diag/mass_diag_filter.cpp [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/filter/massmatch/filter_protein.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/filter/massmatch/filter_protein.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/filter_protein.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/neutral_loss_base.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘toppic::TheoPeakPtrVec toppic::theo_peak_util::geneTheoPeak(toppic::BpSpecPtr, toppic::ActivationPtr, toppic::NeutralLossPtr, double, double, int, int, double, double)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/filter/massmatch/mass_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/filter/massmatch/mass_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match.cpp [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/filter/massmatch/mass_match_factory.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/filter/massmatch/mass_match_factory.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match_factory.cpp [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/filter/massmatch/mass_match_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/filter/massmatch/mass_match_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match_util.cpp [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/filter/oneptm/mass_one_ptm_filter.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/filter/oneptm/mass_one_ptm_filter.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/mass_one_ptm_filter.cpp [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/filter/oneptm/one_ptm_filter_mng.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/filter/oneptm/one_ptm_filter_mng.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_mng.cpp [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/filter/oneptm/one_ptm_filter_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/filter/oneptm/one_ptm_filter_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_processor.cpp [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/basic_diag_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/basic_diag_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/basic_diag_pair.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_processor.cpp:18: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::DiagFilterProcessor::processBlock(toppic::DbBlockPtr, int, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/mass_one_ptm_filter.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::MassOnePtmFilter::computeBestMatch(const PrmMsPtrVec&, const PrmMsPtrVec&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/diagonal.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/diagonal.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal.cpp [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/diagonal_header.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/diagonal_header.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp [ 97%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header_util.cpp /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp: In member function ‘toppic::DiagonalHeaderPtr toppic::DiagonalHeader::clone()’: /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp:27:19: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 27 | DiagonalHeaderPtr DiagonalHeader::clone() { | ^~~~~~~~~~~~~~ [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/dp_pair.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/dp_pair.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/one_ptm_search_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/one_ptm_search_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/one_ptm_search_processor.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /usr/include/boost/system/detail/std_interoperability.hpp:12, from /usr/include/boost/system/error_code.hpp:963, from /usr/include/boost/system/system_error.hpp:11, from /usr/include/boost/thread/exceptions.hpp:22, from /usr/include/boost/thread/pthread/thread_data.hpp:10, from /usr/include/boost/thread/thread_only.hpp:17, from /usr/include/boost/thread/thread.hpp:12, from /<>/toppic-1.3.0+dfsg1/src/common/thread/simple_thread_pool.hpp:21, from /<>/toppic-1.3.0+dfsg1/src/filter/oneptm/one_ptm_filter_processor.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In function ‘void toppic::filterBlock(const ProteoformPtrVec&, const string&, toppic::OnePtmFilterMngPtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/pair.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.cpp:17: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::DPPair::DPPair(int, int, double, double, int, int, toppic::DiagonalHeaderPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/one_ptm_slow_match.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/one_ptm_slow_match.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/one_ptm_slow_match.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/ps_align.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/oneptmsearch/ps_align.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/ps_align.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/graph/dist.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/graph/dist.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/dist.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/oneptmsearch/ps_align.cpp:20: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::PrsmPtr toppic::PSAlign::geneResult(int, toppic::ProteoformPtr, toppic::DeconvMsPtrVec&, toppic::ExtendMsPtrVec&, toppic::PrsmParaPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/graph/proteo_anno.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/graph/proteo_anno.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/proteo_anno.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/graph/proteo_graph.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/graph/proteo_graph.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/proteo_graph.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/graph/proteo_graph_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/graph/proteo_graph_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/proteo_graph_reader.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/graph/spec_graph.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/graph/spec_graph.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/spec_graph.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/graph/spec_graph_reader.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/graph/spec_graph_reader.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graph/spec_graph_reader.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/graphalign/graph_align.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/graphalign/graph_align.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_align.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/graphalign/graph_align_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/graphalign/graph_align_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_align_processor.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/graphalign/graph_dp_node.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/graphalign/graph_dp_node.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_dp_node.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/search/graphalign/graph_post_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/search/graphalign/graph_post_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_post_processor.cpp [ 98%] Building CXX object CMakeFiles/topmg_gui.dir/src/stat/tdgf/comp_prob_value.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/stat/tdgf/comp_prob_value.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_prob_value.cpp In file included from /usr/include/c++/10/vector:72, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/peak.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_prob_value.cpp:20: /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const toppic::ProbPeak&}; _Tp = toppic::ProbPeak; _Alloc = std::allocator]’: /usr/include/c++/10/bits/vector.tcc:426:7: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/stat/tdgf/comp_pvalue_array.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/stat/tdgf/comp_pvalue_array.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_array.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/alter.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/seq/mass_shift.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_align.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘toppic::GraphResultNodePtrVec toppic::GraphAlign::backtrace(int, int)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_align_processor.cpp: In static member function ‘static bool std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_manager(std::_Any_data&, const std::_Any_data&, std::_Manager_operation) [with _Res = void; _Functor = toppic::geneTask(toppic::GraphAlignMngPtr, toppic::ModPtrVec, int, int)::; _ArgTypes = {}]’: /<>/toppic-1.3.0+dfsg1/src/search/graphalign/graph_align_processor.cpp:49:54: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 49 | return [mng_ptr, var_mod_ptr_vec, spectrum_num, idx]() { | ^ [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/stat/tdgf/comp_pvalue_lookup_table.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/stat/tdgf/comp_pvalue_lookup_table.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.cpp [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/stat/tdgf/count_test_num.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/stat/tdgf/count_test_num.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/count_test_num.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/prsm/prsm_para.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/tdgf_mng.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.hpp:22, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_pvalue_lookup_table.cpp:23: /usr/include/c++/10/bits/shared_ptr_base.h: In constructor ‘toppic::CompPValueLookupTable::CompPValueLookupTable(toppic::TdgfMngPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/stat/tdgf/evalue_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/stat/tdgf/evalue_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/evalue_processor.cpp [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/stat/tdgf/tdgf_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/stat/tdgf/tdgf_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/tdgf_util.cpp [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/stat/mcmc/comp_pvalue_mcmc.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/stat/mcmc/comp_pvalue_mcmc.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/mcmc/comp_pvalue_mcmc.cpp [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/stat/mcmc/mcmc_dpr_processor.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/stat/mcmc/mcmc_dpr_processor.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/mcmc/mcmc_dpr_processor.cpp [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/stat/mcmc/mcmc_mass_table_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/stat/mcmc/mcmc_mass_table_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/stat/mcmc/mcmc_mass_table_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/seq/proteoform.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/stat/tdgf/evalue_processor.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::EValueProcessor::init()’: /usr/include/c++/10/bits/shared_ptr_base.h:121:41: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 121 | : _M_use_count(1), _M_weak_count(1) { } | ^ [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/visual/anno_cleavage.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/visual/anno_cleavage.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_cleavage.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/stat/mcmc/comp_pvalue_mcmc.cpp:19: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘double toppic::CompPValueMCMC::compOneProbMCMC(toppic::PrsmPtr, toppic::ActivationPtr, const std::vector&)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/visual/anno_file_list.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/visual/anno_file_list.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_file_list.cpp [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/visual/anno_mass_shift.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/visual/anno_mass_shift.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_mass_shift.cpp [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/visual/anno_proteoform.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/visual/anno_proteoform.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_proteoform.cpp [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/visual/anno_prsm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/visual/anno_prsm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_prsm.cpp [ 99%] Building CXX object CMakeFiles/topmg_gui.dir/src/visual/anno_ptm.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/visual/anno_ptm.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_ptm.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/common/base/ptm_util.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/stat/mcmc/mcmc_dpr_processor.cpp:21: /usr/include/c++/10/bits/shared_ptr_base.h: In member function ‘void toppic::DprProcessor::init()’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [100%] Building CXX object CMakeFiles/topmg_gui.dir/src/visual/anno_ptm_position.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/visual/anno_ptm_position.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_ptm_position.cpp [100%] Building CXX object CMakeFiles/topmg_gui.dir/src/visual/anno_residue.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/visual/anno_residue.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_residue.cpp [100%] Building CXX object CMakeFiles/topmg_gui.dir/src/visual/anno_xml_util.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/visual/anno_xml_util.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/anno_xml_util.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/common/base/amino_acid.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/common/base/mod.hpp:19, from /<>/toppic-1.3.0+dfsg1/src/common/base/residue_util.hpp:20, from /<>/toppic-1.3.0+dfsg1/src/visual/anno_residue.cpp:15: /usr/include/c++/10/bits/shared_ptr_base.h: In static member function ‘static toppic::AnnoResiduePtrVec toppic::AnnoResidue::getAnnoResidues(toppic::ProteoformPtr)’: /usr/include/c++/10/bits/shared_ptr_base.h:763:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 763 | _M_pi = __tmp; | ~~~~~~^~~~~~~ [100%] Building CXX object CMakeFiles/topmg_gui.dir/src/visual/json_transformer.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/visual/json_transformer.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/json_transformer.cpp [100%] Building CXX object CMakeFiles/topmg_gui.dir/src/visual/xml_generator.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/visual/xml_generator.cpp.o -c /<>/toppic-1.3.0+dfsg1/src/visual/xml_generator.cpp [100%] Building CXX object CMakeFiles/topmg_gui.dir/topmg_gui_autogen/OBJ2MOUSMQ/qrc_icon.cpp.o /usr/bin/c++ -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu -I/<>/toppic-1.3.0+dfsg1 -I/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/include -I/<>/toppic-1.3.0+dfsg1/src -I/<>/toppic-1.3.0+dfsg1/ext -I/usr/include/powerpc64le-linux-gnu/qt5 -I/usr/include/powerpc64le-linux-gnu/qt5/QtWidgets -I/usr/include/powerpc64le-linux-gnu/qt5/QtGui -I/usr/include/powerpc64le-linux-gnu/qt5/QtCore -I/usr/lib/powerpc64le-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O3 -fdebug-prefix-map=/<>/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/topmg_gui_autogen/OBJ2MOUSMQ/qrc_icon.cpp.o -c /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/topmg_gui_autogen/OBJ2MOUSMQ/qrc_icon.cpp In file included from /usr/include/c++/10/bits/shared_ptr.h:52, from /usr/include/c++/10/memory:84, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_seq.hpp:18, from /<>/toppic-1.3.0+dfsg1/src/seq/fasta_index_reader.hpp:22, from 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CMakeFiles/topmg_gui.dir/src/visual/anno_ptm.cpp.o CMakeFiles/topmg_gui.dir/src/visual/anno_ptm_position.cpp.o CMakeFiles/topmg_gui.dir/src/visual/anno_residue.cpp.o CMakeFiles/topmg_gui.dir/src/visual/anno_xml_util.cpp.o CMakeFiles/topmg_gui.dir/src/visual/json_transformer.cpp.o CMakeFiles/topmg_gui.dir/src/visual/xml_generator.cpp.o CMakeFiles/topmg_gui.dir/topmg_gui_autogen/OBJ2MOUSMQ/qrc_icon.cpp.o -o ../bin/topmg_gui -lQt5Widgets -lQt5Core -lQt5Gui -lxerces-c -lboost_program_options -lboost_filesystem -lboost_system -lboost_thread -lpthread -lz -lhts make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [100%] Built target topmg_gui make[2]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' dh_auto_test -a -O--buildsystem=cmake create-stamp 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/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topfd_autogen.dir/build.make CMakeFiles/topfd_autogen.dir/build make -f CMakeFiles/topdiff_autogen.dir/build.make CMakeFiles/topdiff_autogen.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/toppic_autogen.dir/build.make CMakeFiles/toppic_autogen.dir/build [ 0%] Automatic MOC and UIC for target topfd make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' /usr/bin/cmake -E 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0%] Built target topfd_autogen make -f CMakeFiles/toppic_gui_autogen.dir/build.make CMakeFiles/toppic_gui_autogen.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_gui_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/toppic_gui_autogen.dir/build.make CMakeFiles/toppic_gui_autogen.dir/build make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 0%] Built target topdiff_autogen make -f CMakeFiles/topmg_autogen.dir/build.make CMakeFiles/topmg_autogen.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_autogen.dir/DependInfo.cmake --color= [ 1%] Automatic MOC and UIC for target toppic_gui /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_gui_autogen.dir/AutogenInfo.json release make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topmg_autogen.dir/build.make CMakeFiles/topmg_autogen.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 1%] Built target toppic_autogen make -f CMakeFiles/topdiff_gui_autogen.dir/build.make CMakeFiles/topdiff_gui_autogen.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/DependInfo.cmake --color= [ 1%] Automatic MOC and UIC for target topmg /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_autogen.dir/AutogenInfo.json release make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topdiff_gui_autogen.dir/build.make CMakeFiles/topdiff_gui_autogen.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 1%] Automatic MOC and UIC for target topdiff_gui /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/AutogenInfo.json release [ 1%] Built target topfd_gui_autogen make -f CMakeFiles/topmg_gui_autogen.dir/build.make CMakeFiles/topmg_gui_autogen.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topmg_gui_autogen.dir/build.make CMakeFiles/topmg_gui_autogen.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 1%] Built target topmg_autogen make -f CMakeFiles/topfd.dir/build.make CMakeFiles/topfd.dir/depend [ 1%] Automatic MOC and UIC for target topmg_gui /usr/bin/cmake -E cmake_autogen /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/AutogenInfo.json release make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 1%] Built target topdiff_gui_autogen make -f CMakeFiles/topdiff.dir/build.make CMakeFiles/topdiff.dir/depend make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topfd.dir/build.make CMakeFiles/topfd.dir/build make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff.dir/DependInfo.cmake --color= [ 1%] Built target toppic_gui_autogen make -f CMakeFiles/topfd_gui.dir/build.make CMakeFiles/topfd_gui.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topfd_gui.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topfd.dir/build'. make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 9%] Built target topfd make -f CMakeFiles/toppic.dir/build.make CMakeFiles/toppic.dir/depend make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topdiff.dir/build.make CMakeFiles/topdiff.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topfd_gui.dir/build.make CMakeFiles/topfd_gui.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topdiff.dir/build'. make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topfd_gui.dir/build'. make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 20%] Built target topdiff make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/toppic.dir/build.make CMakeFiles/toppic.dir/build make -f CMakeFiles/toppic_gui.dir/build.make CMakeFiles/toppic_gui.dir/depend [ 29%] Built target topfd_gui make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topmg.dir/build.make CMakeFiles/topmg.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/toppic_gui.dir/DependInfo.cmake --color= [ 29%] Built target topmg_gui_autogen make -f CMakeFiles/topdiff_gui.dir/build.make CMakeFiles/topdiff_gui.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/toppic.dir/build'. make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 44%] Built target toppic make -f CMakeFiles/topmg_gui.dir/build.make CMakeFiles/topmg_gui.dir/depend make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topdiff_gui.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' cd /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1 /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles/topmg_gui.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/toppic_gui.dir/build.make CMakeFiles/toppic_gui.dir/build make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topmg.dir/build.make CMakeFiles/topmg.dir/build make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topdiff_gui.dir/build.make CMakeFiles/topdiff_gui.dir/build make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make -f CMakeFiles/topmg_gui.dir/build.make CMakeFiles/topmg_gui.dir/build make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topmg.dir/build'. make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/toppic_gui.dir/build'. make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 59%] Built target topmg make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topdiff_gui.dir/build'. make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 71%] Built target topdiff_gui make[3]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topmg_gui.dir/build'. make[3]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' [ 85%] Built target toppic_gui [100%] Built target topmg_gui make[2]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "release" -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/topfd -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/toppic -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/toppic_gui -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/topmg -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/topmg_gui -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/topdiff -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/topdiff_gui -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/base_data -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/base_data/unimod_ptm.xml -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/base_data/env_rescore_para.txt -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/base_data/mass_table.txt -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/base_data/theo_patt.txt -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/AbuScore.tsv -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/XicCorrScore1.tsv -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/DistScore.tsv -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/XicCorrScore2.tsv -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/SummedDistScore.tsv -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/IntScore.tsv -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/CorrScore.tsv -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/SummedCorrScore.tsv -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/SummedIntScore.tsv -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/spectrum.html -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/css/modal.css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/css/spectrum.css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/css/svg.css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/help.html -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images/download.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images/upload-2935442_960_720.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images/png.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images/download-1915749_960_720.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images/download-icon-image-16.jpg -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images/blue-download-icon-23.jpg -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images/svg.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images/info.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images/download1.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/matched_peaks -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/matched_peaks/matchedpeaks.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/matched_peaks/calculateprefixandsuffixmass.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/mass_shift -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/mass_shift/utilfunctions.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/mass_shift/commonFixedPtms.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/mass_shift/massshift.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/ion_fragmentation -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/ion_fragmentation/iontabledata.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/distribution_calc -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/distribution_calc/molecularformulae.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/distribution_calc/isotopes.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/distribution_calc/emassanddistribution.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/distribution_calc/aminoaciddistribution.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/spectrum_graph -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/spectrum_graph/spectrumdownload.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/spectrum_graph/spectrumgraph.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/spectrum_graph/spectrumparameters.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/spectrum_graph/invokespectrum.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/spectrum_graph/images -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/spectrum_graph/images/download.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/spectrum_graph/images/png.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/spectrum_graph/images/svg.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/download -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/download/saveImage.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/UI_helpers -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/UI_helpers/setvaluestohtml.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/UI_helpers/getmasstableofselectedions.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/UI_helpers/onclickandeventhandler.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/UI_helpers/constants.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/UI_helpers/helper.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/UI_helpers/seqofexecution.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/sequence_svg -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/sequence_svg/drawsvg.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/js/sequence_svg/coordinates_util.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/spectrum -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/spectrum/ms.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/spectrum/ms.css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/spectrum/ms.html -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/index.html -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/proteoform.html -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/prsm.html -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/proteins.html -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/css/prsm.css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/css/proteins.css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/forward_enabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/sort_desc_disabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/back_disabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/sort_both.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/forward_enabled_hover.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/Sorting icons.psd -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/sort_desc.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/sort_asc.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/forward_disabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/sort_asc_disabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/back_enabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/back_enabled_hover.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/images/favicon.ico -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/protein.html -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/prsm -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/prsm/saveImage.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/prsm/peakData.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/prsm/prsmtohtml.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/prsm/prsm.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/prsm/buttons.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/proteins -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/proteins/allProteins.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/protein -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/protein/protein.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/topview -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/topview/topview.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/proteoform -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/proteoform/proteoform.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/util -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/util/prsmDataUtil.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/util/navBar.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/util/drawSvg.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/util/coordinates_util.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/monoisotopic_mass -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/monoisotopic_mass/drawMassShiftSvg.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/monoisotopic_mass/theoreticalMass.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/visual/js/monoisotopic_mass/aminoAcid.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/index.css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/lib -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/lib/bootstrap.min.css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/lib/nav_bar.css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/lib/jquery.dataTables.css -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/forward_enabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/sort_desc_disabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/back_disabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/sort_both.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/forward_enabled_hover.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/Sorting icons.psd -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/sort_desc.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/sort_asc.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/forward_disabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/sort_asc_disabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/back_enabled.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/back_enabled_hover.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/css/images/favicon.ico -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/doc -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/doc/spectrum_graph.docx -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/images -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/images/toppic.ico -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/spectrumdownload.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/spectrumgraph.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/spectrumparameters.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/invokespectrum.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/images -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/images/download.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/images/png.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/images/svg.png -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/download -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/download/saveImage.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/jquery.dataTables.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/canvas-toBlob.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/d3 -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/d3/d3.min.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/d3/d3.js -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/bootstrap -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm10_ptm1.txt -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm10_ptm0.txt -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm15_ptm2.txt -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm5_ptm2.txt -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm15_ptm0.txt -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm5_ptm1.txt -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm10_ptm2.txt -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm15_ptm1.txt -- Installing: /<>/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm5_ptm0.txt make[1]: Leaving directory '/<>/toppic-1.3.0+dfsg1/obj-powerpc64le-linux-gnu' dh_install -a -O--buildsystem=cmake install -d debian/toppic/usr/bin cp --reflink=auto -a ./debian/tmp/usr/bin/topdiff ./debian/tmp/usr/bin/topdiff_gui ./debian/tmp/usr/bin/topfd ./debian/tmp/usr/bin/topmg ./debian/tmp/usr/bin/topmg_gui ./debian/tmp/usr/bin/toppic ./debian/tmp/usr/bin/toppic_gui debian/toppic/usr/bin/ install -d debian/.debhelper/generated/toppic install -d debian/.debhelper/generated/toppic-common dh_installdocs -a -O--buildsystem=cmake install -d debian/toppic/usr/share/doc/toppic install -p -m0644 debian/README.Debian debian/toppic/usr/share/doc/toppic/README.Debian install -p -m0644 debian/copyright debian/toppic/usr/share/doc/toppic/copyright dh_installchangelogs -a -O--buildsystem=cmake install -p -m0644 debian/changelog debian/toppic/usr/share/doc/toppic/changelog.Debian dh_installman -a -O--buildsystem=cmake install -d debian/toppic/usr/share/man/man1/ install -p -m0644 ./debian/topfd.1 debian/toppic/usr/share/man/man1/topfd.1 install -p -m0644 ./debian/toppic.1 debian/toppic/usr/share/man/man1/toppic.1 install -p -m0644 ./debian/topmg.1 debian/toppic/usr/share/man/man1/topmg.1 install -p -m0644 ./debian/topdiff.1 debian/toppic/usr/share/man/man1/topdiff.1 man-recode --to-code UTF-8 --suffix .dh-new debian/toppic/usr/share/man/man1/topdiff.1 man-recode --to-code UTF-8 --suffix .dh-new debian/toppic/usr/share/man/man1/topmg.1 man-recode --to-code UTF-8 --suffix .dh-new debian/toppic/usr/share/man/man1/toppic.1 mv debian/toppic/usr/share/man/man1/topmg.1.dh-new debian/toppic/usr/share/man/man1/topmg.1 chmod 0644 -- debian/toppic/usr/share/man/man1/topmg.1 man-recode --to-code UTF-8 --suffix .dh-new debian/toppic/usr/share/man/man1/topfd.1 mv debian/toppic/usr/share/man/man1/topdiff.1.dh-new debian/toppic/usr/share/man/man1/topdiff.1 chmod 0644 -- debian/toppic/usr/share/man/man1/topdiff.1 mv debian/toppic/usr/share/man/man1/toppic.1.dh-new debian/toppic/usr/share/man/man1/toppic.1 chmod 0644 -- debian/toppic/usr/share/man/man1/toppic.1 mv debian/toppic/usr/share/man/man1/topfd.1.dh-new debian/toppic/usr/share/man/man1/topfd.1 chmod 0644 -- debian/toppic/usr/share/man/man1/topfd.1 dh_installinit -a -O--buildsystem=cmake dh_installsystemduser -a -O--buildsystem=cmake dh_perl -a -O--buildsystem=cmake dh_link -a -O--buildsystem=cmake rm -f debian/toppic/usr/share/man/man1/topdiff_gui.1.gz ln -s topdiff.1.gz debian/toppic/usr/share/man/man1/topdiff_gui.1.gz rm -f debian/toppic/usr/share/man/man1/topmg_gui.1.gz ln -s topmg.1.gz debian/toppic/usr/share/man/man1/topmg_gui.1.gz rm -f debian/toppic/usr/share/man/man1/toppic_gui.1.gz ln -s toppic.1.gz debian/toppic/usr/share/man/man1/toppic_gui.1.gz dh_strip_nondeterminism -a -O--buildsystem=cmake dh_compress -a -O--buildsystem=cmake cd debian/toppic chmod a-x usr/share/doc/toppic/changelog.Debian usr/share/man/man1/topdiff.1 usr/share/man/man1/topfd.1 usr/share/man/man1/topmg.1 usr/share/man/man1/toppic.1 gzip -9nf usr/share/doc/toppic/changelog.Debian usr/share/man/man1/topdiff.1 usr/share/man/man1/topfd.1 usr/share/man/man1/topmg.1 usr/share/man/man1/toppic.1 cd '/<>/toppic-1.3.0+dfsg1' dh_fixperms -a -O--buildsystem=cmake find debian/toppic -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/toppic ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/toppic/usr/share/doc -type f -a -true -a ! -regex 'debian/toppic/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/toppic/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/toppic/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/toppic -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/toppic/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake install -d debian/toppic/usr/lib/debug/.dwz/powerpc64le-linux-gnu dwz -mdebian/toppic/usr/lib/debug/.dwz/powerpc64le-linux-gnu/toppic.debug -M/usr/lib/debug/.dwz/powerpc64le-linux-gnu/toppic.debug -- debian/toppic/usr/bin/topdiff debian/toppic/usr/bin/topdiff_gui debian/toppic/usr/bin/topfd debian/toppic/usr/bin/topmg debian/toppic/usr/bin/topmg_gui debian/toppic/usr/bin/toppic debian/toppic/usr/bin/toppic_gui objcopy --compress-debug-sections debian/toppic/usr/lib/debug/.dwz/powerpc64le-linux-gnu/toppic.debug dh_strip -a -O--buildsystem=cmake install -d debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/df objcopy --only-keep-debug --compress-debug-sections debian/toppic/usr/bin/topdiff debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/df/e0c0340c75796d7a10fde6fc2f44855d1f06c9.debug chmod 0644 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/df/e0c0340c75796d7a10fde6fc2f44855d1f06c9.debug chown 0:0 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/df/e0c0340c75796d7a10fde6fc2f44855d1f06c9.debug strip --remove-section=.comment --remove-section=.note debian/toppic/usr/bin/topdiff objcopy --add-gnu-debuglink debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/df/e0c0340c75796d7a10fde6fc2f44855d1f06c9.debug debian/toppic/usr/bin/topdiff install -d debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/81 objcopy --only-keep-debug --compress-debug-sections debian/toppic/usr/bin/topmg debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/81/39f6549299107769d70c6c10591984a0f73ff3.debug chmod 0644 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/81/39f6549299107769d70c6c10591984a0f73ff3.debug chown 0:0 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/81/39f6549299107769d70c6c10591984a0f73ff3.debug strip --remove-section=.comment --remove-section=.note debian/toppic/usr/bin/topmg objcopy --add-gnu-debuglink debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/81/39f6549299107769d70c6c10591984a0f73ff3.debug debian/toppic/usr/bin/topmg install -d debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/43 objcopy --only-keep-debug --compress-debug-sections debian/toppic/usr/bin/toppic_gui debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/43/17a1e35cf932bfbed96cafd30689e62864a1ca.debug chmod 0644 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/43/17a1e35cf932bfbed96cafd30689e62864a1ca.debug chown 0:0 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/43/17a1e35cf932bfbed96cafd30689e62864a1ca.debug strip --remove-section=.comment --remove-section=.note debian/toppic/usr/bin/toppic_gui objcopy --add-gnu-debuglink debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/43/17a1e35cf932bfbed96cafd30689e62864a1ca.debug debian/toppic/usr/bin/toppic_gui install -d debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ed objcopy --only-keep-debug --compress-debug-sections debian/toppic/usr/bin/topmg_gui debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ed/93fd898ecadf3e225c8e2debd022b6c4f45259.debug chmod 0644 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ed/93fd898ecadf3e225c8e2debd022b6c4f45259.debug chown 0:0 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ed/93fd898ecadf3e225c8e2debd022b6c4f45259.debug strip --remove-section=.comment --remove-section=.note debian/toppic/usr/bin/topmg_gui objcopy --add-gnu-debuglink debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ed/93fd898ecadf3e225c8e2debd022b6c4f45259.debug debian/toppic/usr/bin/topmg_gui install -d debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/41 objcopy --only-keep-debug --compress-debug-sections debian/toppic/usr/bin/topfd debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/41/752a8e867ea1b8315eaec807cf11965036d82c.debug chmod 0644 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/41/752a8e867ea1b8315eaec807cf11965036d82c.debug chown 0:0 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/41/752a8e867ea1b8315eaec807cf11965036d82c.debug strip --remove-section=.comment --remove-section=.note debian/toppic/usr/bin/topfd objcopy --add-gnu-debuglink debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/41/752a8e867ea1b8315eaec807cf11965036d82c.debug debian/toppic/usr/bin/topfd install -d debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ce objcopy --only-keep-debug --compress-debug-sections debian/toppic/usr/bin/toppic debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ce/482d313ea3bc2c12d5aba3947e5d8a56e16f3b.debug chmod 0644 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ce/482d313ea3bc2c12d5aba3947e5d8a56e16f3b.debug chown 0:0 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ce/482d313ea3bc2c12d5aba3947e5d8a56e16f3b.debug strip --remove-section=.comment --remove-section=.note debian/toppic/usr/bin/toppic objcopy --add-gnu-debuglink debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ce/482d313ea3bc2c12d5aba3947e5d8a56e16f3b.debug debian/toppic/usr/bin/toppic install -d debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ca objcopy --only-keep-debug --compress-debug-sections debian/toppic/usr/bin/topdiff_gui debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ca/4ab37d0938dfaff96911dbfeecb4d81d3769ad.debug chmod 0644 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ca/4ab37d0938dfaff96911dbfeecb4d81d3769ad.debug chown 0:0 -- debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ca/4ab37d0938dfaff96911dbfeecb4d81d3769ad.debug strip --remove-section=.comment --remove-section=.note debian/toppic/usr/bin/topdiff_gui objcopy --add-gnu-debuglink debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.build-id/ca/4ab37d0938dfaff96911dbfeecb4d81d3769ad.debug debian/toppic/usr/bin/topdiff_gui install -d debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/toppic/usr/lib/debug/.dwz/powerpc64le-linux-gnu debian/.debhelper/toppic/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/toppic/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/toppic/usr/lib/debug install -d debian/.debhelper/toppic/dbgsym-root/usr/share/doc ln -s toppic debian/.debhelper/toppic/dbgsym-root/usr/share/doc/toppic-dbgsym dh_makeshlibs -a -O--buildsystem=cmake rm -f debian/toppic/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=cmake install -d debian/toppic/DEBIAN dpkg-shlibdeps -Tdebian/toppic.substvars debian/toppic/usr/bin/topdiff debian/toppic/usr/bin/topmg debian/toppic/usr/bin/toppic_gui debian/toppic/usr/bin/topmg_gui debian/toppic/usr/bin/topfd debian/toppic/usr/bin/toppic debian/toppic/usr/bin/topdiff_gui dh_installdeb -a -O--buildsystem=cmake dh_gencontrol -a -O--buildsystem=cmake echo misc:Depends= >> debian/toppic.substvars echo misc:Pre-Depends= >> debian/toppic.substvars install -d debian/.debhelper/toppic/dbgsym-root/DEBIAN dpkg-gencontrol -ptoppic -ldebian/changelog -Tdebian/toppic.substvars -Pdebian/.debhelper/toppic/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=toppic-dbgsym "-DDepends=toppic (= \${binary:Version})" "-DDescription=debug symbols for toppic" "-DBuild-Ids=41752a8e867ea1b8315eaec807cf11965036d82c 4317a1e35cf932bfbed96cafd30689e62864a1ca 8139f6549299107769d70c6c10591984a0f73ff3 ca4ab37d0938dfaff96911dbfeecb4d81d3769ad ce482d313ea3bc2c12d5aba3947e5d8a56e16f3b dfe0c0340c75796d7a10fde6fc2f44855d1f06c9 ed93fd898ecadf3e225c8e2debd022b6c4f45259" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/toppic/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/toppic/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptoppic -ldebian/changelog -Tdebian/toppic.substvars -Pdebian/toppic chmod 0644 -- debian/toppic/DEBIAN/control chown 0:0 -- debian/toppic/DEBIAN/control dh_md5sums -a -O--buildsystem=cmake cd debian/toppic >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/toppic/DEBIAN/md5sums chown 0:0 -- debian/toppic/DEBIAN/md5sums cd debian/.debhelper/toppic/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/toppic/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/toppic/dbgsym-root/DEBIAN/md5sums dh_builddeb -a -O--buildsystem=cmake dpkg-deb --build debian/toppic .. install -d debian/.debhelper/scratch-space/build-toppic dpkg-deb --build debian/.debhelper/toppic/dbgsym-root debian/.debhelper/scratch-space/build-toppic INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing toppic (in debian/toppic); do_strip: , oemstrip: pkgstriptranslations: processing toppic-dbgsym (in debian/.debhelper/toppic/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/toppic/DEBIAN/control, package toppic, directory debian/toppic pkgstripfiles: Running PNG optimization (using 4 cpus) for package toppic ... pkgstripfiles: No PNG files. dpkg-deb: building package 'toppic' in '../toppic_1.3.0+dfsg1-4build1_ppc64el.deb'. pkgstripfiles: processing control file: debian/.debhelper/toppic/dbgsym-root/DEBIAN/control, package toppic-dbgsym, directory debian/.debhelper/toppic/dbgsym-root dpkg-deb: building package 'toppic-dbgsym' in 'debian/.debhelper/scratch-space/build-toppic/toppic-dbgsym_1.3.0+dfsg1-4build1_ppc64el.deb'. Renaming toppic-dbgsym_1.3.0+dfsg1-4build1_ppc64el.deb to toppic-dbgsym_1.3.0+dfsg1-4build1_ppc64el.ddeb mv debian/.debhelper/scratch-space/build-toppic/toppic-dbgsym_1.3.0\+dfsg1-4build1_ppc64el.deb ../toppic-dbgsym_1.3.0\+dfsg1-4build1_ppc64el.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../toppic_1.3.0+dfsg1-4build1_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-12-13T06:42:43Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ toppic_1.3.0+dfsg1-4build1_ppc64el.changes: ------------------------------------------- Format: 1.8 Date: Sat, 12 Dec 2020 13:20:25 +0100 Source: toppic Binary: toppic Architecture: ppc64el Version: 1.3.0+dfsg1-4build1 Distribution: hirsute-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: toppic - Top-down proteoform identification and characterization (programs Changes: toppic (1.3.0+dfsg1-4build1) hirsute; urgency=medium . * No-change rebuild for boost soname change. Checksums-Sha1: fbe06ecdcd97ef9dfe17cf438a6aecd1cbe7ea70 89921184 toppic-dbgsym_1.3.0+dfsg1-4build1_ppc64el.ddeb 1a267c52c36bf9d2000b5ef745879a6319469975 13133 toppic_1.3.0+dfsg1-4build1_ppc64el.buildinfo 5605911c84c5554bac7e6bffee275144b84828f0 2180560 toppic_1.3.0+dfsg1-4build1_ppc64el.deb Checksums-Sha256: 975613abb618674f9a584b891bce951cfaf3b3fe3befa19a00704d3cbc4ea85e 89921184 toppic-dbgsym_1.3.0+dfsg1-4build1_ppc64el.ddeb 1fd5617c57782bdfad48c46069eb4b34a8a7be63dc6dfa09ae842cf5617bdbb8 13133 toppic_1.3.0+dfsg1-4build1_ppc64el.buildinfo 52570e09de0bfabbf94ea8c4a0d62e2ef1d26022717746fbd174359672c48b2c 2180560 toppic_1.3.0+dfsg1-4build1_ppc64el.deb Files: 467b1eac14fed665fb6a2672a0d4956d 89921184 debug optional toppic-dbgsym_1.3.0+dfsg1-4build1_ppc64el.ddeb 98da88c83ed40a187a136fc120bc994b 13133 science optional toppic_1.3.0+dfsg1-4build1_ppc64el.buildinfo 1e55298e9c56cf9e25953922b86323eb 2180560 science optional toppic_1.3.0+dfsg1-4build1_ppc64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: toppic Binary: toppic toppic-dbgsym Architecture: ppc64el Version: 1.3.0+dfsg1-4build1 Checksums-Md5: 467b1eac14fed665fb6a2672a0d4956d 89921184 toppic-dbgsym_1.3.0+dfsg1-4build1_ppc64el.ddeb 1e55298e9c56cf9e25953922b86323eb 2180560 toppic_1.3.0+dfsg1-4build1_ppc64el.deb Checksums-Sha1: fbe06ecdcd97ef9dfe17cf438a6aecd1cbe7ea70 89921184 toppic-dbgsym_1.3.0+dfsg1-4build1_ppc64el.ddeb 5605911c84c5554bac7e6bffee275144b84828f0 2180560 toppic_1.3.0+dfsg1-4build1_ppc64el.deb Checksums-Sha256: 975613abb618674f9a584b891bce951cfaf3b3fe3befa19a00704d3cbc4ea85e 89921184 toppic-dbgsym_1.3.0+dfsg1-4build1_ppc64el.ddeb 52570e09de0bfabbf94ea8c4a0d62e2ef1d26022717746fbd174359672c48b2c 2180560 toppic_1.3.0+dfsg1-4build1_ppc64el.deb Build-Origin: Ubuntu Build-Architecture: ppc64el Build-Date: Sun, 13 Dec 2020 06:42:41 +0000 Build-Path: /<>/toppic-1.3.0+dfsg1 Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.3-1ubuntu1), autopoint (= 0.19.8.1-10build1), autotools-dev (= 20180224.1), base-files (= 11ubuntu16), base-passwd (= 3.5.48), bash (= 5.1-1ubuntu1), binutils (= 2.35.50.20201210-0ubuntu2), binutils-common (= 2.35.50.20201210-0ubuntu2), binutils-powerpc64le-linux-gnu (= 2.35.50.20201210-0ubuntu2), bsdextrautils (= 2.36.1-1ubuntu2), bsdutils (= 1:2.36.1-1ubuntu2), build-essential (= 12.8ubuntu3), bzip2 (= 1.0.8-4ubuntu2), cmake (= 3.18.4-1ubuntu3), cmake-data (= 3.18.4-1ubuntu3), coreutils (= 8.32-4ubuntu2), cpp (= 4:10.2.0-1ubuntu1), cpp-10 (= 10.2.1-1ubuntu1), dash (= 0.5.11+git20200708+dd9ef66+really0.5.10.2-0ubuntu1), debconf (= 1.5.74), debhelper (= 13.3ubuntu1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3ubuntu1), docutils-common (= 0.16+dfsg-3), dpkg (= 1.20.5ubuntu3), dpkg-dev (= 1.20.5ubuntu3), dwz (= 0.13+20201015-2), file (= 1:5.39-3), findutils (= 4.7.0-1ubuntu2), fontconfig (= 2.13.1-4.2ubuntu2), fontconfig-config (= 2.13.1-4.2ubuntu2), fonts-dejavu-core (= 2.37-2), fonts-font-awesome (= 5.0.10+really4.7.0~dfsg-2), fonts-freefont-ttf (= 20120503-10), g++ (= 4:10.2.0-1ubuntu1), g++-10 (= 10.2.1-1ubuntu1), gcc (= 4:10.2.0-1ubuntu1), gcc-10 (= 10.2.1-1ubuntu1), gcc-10-base (= 10.2.1-1ubuntu1), gettext (= 0.19.8.1-10build1), gettext-base (= 0.19.8.1-10build1), grep (= 3.6-1), groff-base (= 1.22.4-5), gzip (= 1.10-2ubuntu1), hostname (= 3.23), icu-devtools (= 67.1-5), init-system-helpers (= 1.59), intltool-debian (= 0.35.0+20060710.5), javascript-common (= 11), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.4.3-2), libasan6 (= 10.2.1-1ubuntu1), libasn1-8-heimdal (= 7.7.0+dfsg-2), libatomic1 (= 10.2.1-1ubuntu1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3ubuntu3), libaudit1 (= 1:2.8.5-3ubuntu3), libavahi-client3 (= 0.8-3ubuntu2), libavahi-common-data (= 0.8-3ubuntu2), libavahi-common3 (= 0.8-3ubuntu2), libbinutils (= 2.35.50.20201210-0ubuntu2), libblkid1 (= 2.36.1-1ubuntu2), libboost-atomic1.74-dev (= 1.74.0-3ubuntu1), libboost-atomic1.74.0 (= 1.74.0-3ubuntu1), libboost-chrono-dev (= 1.74.0.3ubuntu1), libboost-chrono1.74-dev (= 1.74.0-3ubuntu1), libboost-chrono1.74.0 (= 1.74.0-3ubuntu1), libboost-date-time1.74-dev (= 1.74.0-3ubuntu1), libboost-date-time1.74.0 (= 1.74.0-3ubuntu1), libboost-dev (= 1.74.0.3ubuntu1), libboost-filesystem-dev (= 1.74.0.3ubuntu1), libboost-filesystem1.74-dev (= 1.74.0-3ubuntu1), libboost-filesystem1.74.0 (= 1.74.0-3ubuntu1), libboost-iostreams-dev (= 1.74.0.3ubuntu1), libboost-iostreams1.74-dev (= 1.74.0-3ubuntu1), libboost-iostreams1.74.0 (= 1.74.0-3ubuntu1), libboost-program-options-dev (= 1.74.0.3ubuntu1), libboost-program-options1.74-dev (= 1.74.0-3ubuntu1), libboost-program-options1.74.0 (= 1.74.0-3ubuntu1), libboost-regex1.74-dev (= 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libcurl4 (= 7.72.0-1ubuntu1), libcurl4-gnutls-dev (= 7.72.0-1ubuntu1), libdb5.3 (= 5.3.28+dfsg1-0.6ubuntu3), libdbus-1-3 (= 1.12.20-1ubuntu1), libdebconfclient0 (= 0.255ubuntu1), libdebhelper-perl (= 13.3ubuntu1), libdeflate-dev (= 1.6-1), libdeflate0 (= 1.6-1), libdouble-conversion3 (= 3.1.5-6.1), libdpkg-perl (= 1.20.5ubuntu3), libdrm-amdgpu1 (= 2.4.103-2), libdrm-common (= 2.4.103-2), libdrm-nouveau2 (= 2.4.103-2), libdrm-radeon1 (= 2.4.103-2), libdrm2 (= 2.4.103-2), libedit2 (= 3.1-20191231-1), libegl-dev (= 1.3.2-1), libegl-mesa0 (= 20.2.4-1), libegl1 (= 1.3.2-1), libelf1 (= 0.182-1), libevdev2 (= 1.10.0+dfsg-1), libexpat1 (= 2.2.10-1), libffi8ubuntu1 (= 3.4~20200819gead65ca871-0ubuntu3), libfile-stripnondeterminism-perl (= 1.9.0-1), libfontconfig1 (= 2.13.1-4.2ubuntu2), libfreetype6 (= 2.10.4+dfsg-1), libgbm1 (= 20.2.4-1), libgcc-10-dev (= 10.2.1-1ubuntu1), libgcc-s1 (= 10.2.1-1ubuntu1), libgcrypt20 (= 1.8.7-2ubuntu1), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libgl-dev (= 1.3.2-1), libgl1 (= 1.3.2-1), libgl1-mesa-dri (= 20.2.4-1), libglapi-mesa (= 20.2.4-1), libglib2.0-0 (= 2.66.3-2), libglu1-mesa (= 9.0.1-1build1), libglu1-mesa-dev (= 9.0.1-1build1), libglvnd0 (= 1.3.2-1), libglx-dev (= 1.3.2-1), libglx-mesa0 (= 20.2.4-1), libglx0 (= 1.3.2-1), libgmp10 (= 2:6.2.0+dfsg-6ubuntu1), libgnutls30 (= 3.6.15-4ubuntu2), libgomp1 (= 10.2.1-1ubuntu1), libgpg-error0 (= 1.38-2), libgraphite2-3 (= 1.3.14-1), libgssapi-krb5-2 (= 1.17-10ubuntu1), libgssapi3-heimdal (= 7.7.0+dfsg-2), libgudev-1.0-0 (= 1:234-1), libharfbuzz0b (= 2.6.7-1ubuntu1), libhcrypto4-heimdal (= 7.7.0+dfsg-2), libheimbase1-heimdal (= 7.7.0+dfsg-2), libheimntlm0-heimdal (= 7.7.0+dfsg-2), libhogweed6 (= 3.6-2), libhts-dev (= 1.11-2), libhts3 (= 1.11-2), libhx509-5-heimdal (= 7.7.0+dfsg-2), libice6 (= 2:1.0.10-1), libicu-dev (= 67.1-5), libicu67 (= 67.1-5), libidn2-0 (= 2.3.0-4), libinput-bin (= 1.16.4-1ubuntu1), libinput10 (= 1.16.4-1ubuntu1), libisl23 (= 0.23-1), libitm1 (= 10.2.1-1ubuntu1), libjpeg-turbo8 (= 2.0.3-0ubuntu2), libjpeg8 (= 8c-2ubuntu8), libjs-bootstrap4 (= 4.5.2+dfsg1-1), libjs-filesaver (= 2.0.2+dfsg-3), libjs-jquery (= 3.5.1+dfsg+~3.5.4-3), libjs-jquery-ui (= 1.12.1+dfsg-7), libjs-popper.js (= 1.16.1+ds-2), libjsoncpp24 (= 1.9.4-3), libk5crypto3 (= 1.17-10ubuntu1), libkeyutils1 (= 1.6.1-2ubuntu1), libkrb5-26-heimdal (= 7.7.0+dfsg-2), libkrb5-3 (= 1.17-10ubuntu1), libkrb5support0 (= 1.17-10ubuntu1), libldap-2.4-2 (= 2.4.53+dfsg-1ubuntu5), libllvm11 (= 1:11.0.1~+rc1-1~exp1), liblsan0 (= 10.2.1-1ubuntu1), liblz4-1 (= 1.9.3-0ubuntu1), liblzma-dev (= 5.2.4-1ubuntu1), liblzma5 (= 5.2.4-1ubuntu1), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmd4c0 (= 0.4.6-1), libmount1 (= 2.36.1-1ubuntu2), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libmtdev1 (= 1.1.6-1), libncurses6 (= 6.2+20201114-1), libncursesw6 (= 6.2+20201114-1), libnettle8 (= 3.6-2), libnghttp2-14 (= 1.42.0-1), libnsl-dev (= 1.3.0-0ubuntu3), libnsl2 (= 1.3.0-0ubuntu3), libp11-kit0 (= 0.23.22-1), libpam-modules (= 1.3.1-5ubuntu6), libpam-modules-bin (= 1.3.1-5ubuntu6), libpam-runtime (= 1.3.1-5ubuntu6), libpam0g (= 1.3.1-5ubuntu6), libpcre2-16-0 (= 10.35-2ubuntu1), libpcre2-8-0 (= 10.35-2ubuntu1), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.0-5), libpipeline1 (= 1.5.3-1), libpng16-16 (= 1.6.37-3), libprocps8 (= 2:3.3.16-5ubuntu2), libpsl5 (= 0.21.0-1.1ubuntu1), libpthread-stubs0-dev (= 0.4-1), libpwizlite-dev (= 3.0.3-1build1), libpwizlite3 (= 3.0.3-1build1), libpython3-stdlib (= 3.9.0-3ubuntu1), libpython3.9-minimal (= 3.9.1-1), libpython3.9-stdlib (= 3.9.1-1), libqt5concurrent5 (= 5.15.2+dfsg-2), libqt5core5a (= 5.15.2+dfsg-2), libqt5dbus5 (= 5.15.2+dfsg-2), libqt5gui5 (= 5.15.2+dfsg-2), libqt5network5 (= 5.15.2+dfsg-2), libqt5printsupport5 (= 5.15.2+dfsg-2), libqt5sql5 (= 5.15.2+dfsg-2), libqt5test5 (= 5.15.2+dfsg-2), libqt5widgets5 (= 5.15.2+dfsg-2), libqt5xml5 (= 5.15.2+dfsg-2), libquadmath0 (= 10.2.1-1ubuntu1), libreadline8 (= 8.1-1), librhash0 (= 1.4.0-1), libroken18-heimdal (= 7.7.0+dfsg-2), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build2), libsasl2-2 (= 2.1.27+dfsg-2ubuntu1), libsasl2-modules-db (= 2.1.27+dfsg-2ubuntu1), libseccomp2 (= 2.4.3-1ubuntu6), libselinux1 (= 3.1-2build2), libsensors-config (= 1:3.6.0-2ubuntu1), libsensors5 (= 1:3.6.0-2ubuntu1), libsigsegv2 (= 2.12-2build1), libsm6 (= 2:1.2.3-1), libsmartcols1 (= 2.36.1-1ubuntu2), libsqlite3-0 (= 3.34.0-1), libssh-4 (= 0.9.5-1), libssl1.1 (= 1.1.1f-1ubuntu5), libstdc++-10-dev (= 10.2.1-1ubuntu1), libstdc++6 (= 10.2.1-1ubuntu1), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.6-5ubuntu1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2+20201114-1), libtirpc-common (= 1.2.6-3), libtirpc-dev (= 1.2.6-3), libtirpc3 (= 1.2.6-3), libtool (= 2.4.6-14), libtsan0 (= 10.2.1-1ubuntu1), libubsan1 (= 10.2.1-1ubuntu1), libuchardet0 (= 0.0.7-1), libudev1 (= 246.6-5ubuntu1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36.1-1ubuntu2), libuv1 (= 1.40.0-1), libvulkan-dev (= 1.2.154.1-1), libvulkan1 (= 1.2.154.1-1), libwacom-common (= 1.6-1), libwacom2 (= 1.6-1), libwayland-client0 (= 1.18.0-2~exp1.1), libwayland-server0 (= 1.18.0-2~exp1.1), libwind0-heimdal (= 7.7.0+dfsg-2), libx11-6 (= 2:1.6.12-1), libx11-data (= 2:1.6.12-1), libx11-dev (= 2:1.6.12-1), libx11-xcb1 (= 2:1.6.12-1), libxau-dev (= 1:1.0.9-0ubuntu1), libxau6 (= 1:1.0.9-0ubuntu1), libxcb-dri2-0 (= 1.14-2), libxcb-dri3-0 (= 1.14-2), libxcb-glx0 (= 1.14-2), libxcb-icccm4 (= 0.4.1-1.1), libxcb-image0 (= 0.4.0-1build1), libxcb-keysyms1 (= 0.4.0-1build1), libxcb-present0 (= 1.14-2), libxcb-randr0 (= 1.14-2), libxcb-render-util0 (= 0.3.9-1build1), libxcb-render0 (= 1.14-2), libxcb-shape0 (= 1.14-2), libxcb-shm0 (= 1.14-2), libxcb-sync1 (= 1.14-2), libxcb-util1 (= 0.4.0-1), libxcb-xfixes0 (= 1.14-2), libxcb-xinerama0 (= 1.14-2), libxcb-xinput0 (= 1.14-2), libxcb-xkb1 (= 1.14-2), libxcb1 (= 1.14-2), libxcb1-dev (= 1.14-2), libxdamage1 (= 1:1.1.5-2), libxdmcp-dev (= 1:1.1.3-0ubuntu1), libxdmcp6 (= 1:1.1.3-0ubuntu1), libxerces-c-dev (= 3.2.3+debian-2), libxerces-c3.2 (= 3.2.3+debian-2), libxext-dev (= 2:1.3.4-0ubuntu1), libxext6 (= 2:1.3.4-0ubuntu1), libxfixes3 (= 1:5.0.3-2), libxkbcommon-x11-0 (= 1.0.3-2), libxkbcommon0 (= 1.0.3-2), libxml2 (= 2.9.10+dfsg-6.3build1), libxrender1 (= 1:0.9.10-1), libxshmfence1 (= 1.3-1), libxxf86vm1 (= 1:1.1.4-1build1), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.8.0-32.34+21.04.1), login (= 1:4.8.1-1ubuntu7), lsb-base (= 11.1.0ubuntu2), m4 (= 1.4.18-4), mailcap (= 3.67ubuntu1), make (= 4.3-4ubuntu1), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), media-types (= 1.0.1ubuntu1), mime-support (= 3.66), ncurses-base (= 6.2+20201114-1), ncurses-bin (= 6.2+20201114-1), node-jquery (= 3.5.1+dfsg+~3.5.4-3), patch (= 2.7.6-6), perl (= 5.32.0-5), perl-base (= 5.32.0-5), perl-modules-5.32 (= 5.32.0-5), pkg-config (= 0.29.2-1ubuntu1), po-debconf (= 1.0.21), procps (= 2:3.3.16-5ubuntu2), python3 (= 3.9.0-3ubuntu1), python3-docutils (= 0.16+dfsg-3), python3-minimal (= 3.9.0-3ubuntu1), python3-roman (= 2.0.0-5), python3.9 (= 3.9.1-1), python3.9-minimal (= 3.9.1-1), qt5-qmake (= 5.15.2+dfsg-2), qt5-qmake-bin (= 5.15.2+dfsg-2), qtbase5-dev (= 5.15.2+dfsg-2), qtbase5-dev-tools (= 5.15.2+dfsg-2), qtchooser (= 66-2build1), readline-common (= 8.1-1), rpcsvc-proto (= 1.4.2-0ubuntu4), sed (= 4.7-1ubuntu1), sensible-utils (= 0.0.13), sgml-base (= 1.30), shared-mime-info (= 2.0-1), sysvinit-utils (= 2.96-5ubuntu1), tar (= 1.32+dfsg-1), tzdata (= 2020d-1ubuntu1), ucf (= 3.0043), util-linux (= 2.36.1-1ubuntu2), x11-common (= 1:7.7+19ubuntu15), x11proto-core-dev (= 2020.1-1), x11proto-dev (= 2020.1-1), x11proto-xext-dev (= 2020.1-1), xkb-data (= 2.29-2), xml-core (= 0.18+nmu1), xorg-sgml-doctools (= 1:1.11-1), xtrans-dev (= 1.4.0-1), xz-utils (= 5.2.4-1ubuntu1), zlib1g (= 1:1.2.11.dfsg-2ubuntu4), zlib1g-dev (= 1:1.2.11.dfsg-2ubuntu4) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1607775625" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ toppic_1.3.0+dfsg1-4build1_ppc64el.deb -------------------------------------- new Debian package, version 2.0. size 2180560 bytes: control archive=2000 bytes. 3215 bytes, 50 lines control 822 bytes, 14 lines md5sums Package: toppic Version: 1.3.0+dfsg1-4build1 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: The Debichem Group Installed-Size: 23035 Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libboost-thread1.74.0 (>= 1.74.0), libc6 (>= 2.29), libgcc-s1 (>= 3.4.4), libhts3 (>= 1.10), libpwizlite3 (>= 3.0.3), libqt5core5a (>= 5.15.1), libqt5gui5 (>= 5.0.2) | libqt5gui5-gles (>= 5.0.2), libqt5widgets5 (>= 5.2.0~alpha1), libstdc++6 (>= 9), libxerces-c3.2, toppic-common (= 1.3.0+dfsg1-4build1) Section: science Priority: optional Homepage: http://proteomics.informatics.iupui.edu/software/toppic/index.html Description: Top-down proteoform identification and characterization (programs) The TopPIC Suite consists of four software tools for the interpretation of top-down mass spectrometry data: TopFD, TopPIC, TopMG, and TopDiff. . -TopFD (Top-down mass spectral Feature Detection) is a software tool for top-down spectral deconvolution and a successor to MS-Deconv. It groups top-down spectral peaks into isotopomer envelopes and converts isotopomer envelopes to monoisotopic neutral masses. In addition, it extracts proteoform features from LC-MS or CE-MS data. . -TopPIC (Top-down mass spectrometry based Proteoform Identification and Characterization) identifies and characterizes proteoforms at the proteome level by searching top-down tandem mass spectra against a protein sequence database. TopPIC is a successor to MS-Align+. It efficiently identifies proteoforms with unexpected alterations, such as mutations and post-translational modifications (PTMs), accurately estimates the statistical significance of identifications, and characterizes reported proteoforms with unknown mass shifts. It uses several techniques, such as indexes, spectral alignment, generation function methods, and the modification identification score (MIScore), to increase the speed, sensitivity, and accuracy. . -TopMG (Top-down mass spectrometry based proteoform identification using Mass Graphs) is a software tool for identifying ultra-modified proteoforms by searching top-down tandem mass spectra against a protein sequence database. It is capable of identifying proteoforms with multiple variable PTMs and unexpected alterations, such as histone proteoforms and phosphorylated ones. It uses mass graphs, which efficiently represent candidate proteoforms with multiple variable PTMs, to increase the speed and sensitivity in proteoform identification. In addition, approximate spectrum-based filtering methods are employed for protein sequence filtering, and a Markov chain Monte Carlo method (TopMCMC) is used for estimating the statistical significance of identifications. . -TopDiff (Top-down mass spectrometry-based identification of Differentially expressed proteoforms) compares the abundances of proteoforms and finds differentially expressed proteoforms by using identifications of top-down mass spectrometry data of several protein samples. drwxr-xr-x root/root 0 2020-12-12 12:20 ./ drwxr-xr-x root/root 0 2020-12-12 12:20 ./usr/ drwxr-xr-x root/root 0 2020-12-12 12:20 ./usr/bin/ -rwxr-xr-x root/root 2624000 2020-12-12 12:20 ./usr/bin/topdiff -rwxr-xr-x root/root 2689536 2020-12-12 12:20 ./usr/bin/topdiff_gui -rwxr-xr-x root/root 1903104 2020-12-12 12:20 ./usr/bin/topfd -rwxr-xr-x root/root 4065800 2020-12-12 12:20 ./usr/bin/topmg -rwxr-xr-x root/root 4196872 2020-12-12 12:20 ./usr/bin/topmg_gui -rwxr-xr-x root/root 3934728 2020-12-12 12:20 ./usr/bin/toppic -rwxr-xr-x root/root 4131336 2020-12-12 12:20 ./usr/bin/toppic_gui drwxr-xr-x root/root 0 2020-12-12 12:20 ./usr/share/ drwxr-xr-x root/root 0 2020-12-12 12:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-12-12 12:20 ./usr/share/doc/toppic/ -rw-r--r-- root/root 395 2020-11-11 17:36 ./usr/share/doc/toppic/README.Debian -rw-r--r-- root/root 718 2020-12-12 12:20 ./usr/share/doc/toppic/changelog.Debian.gz -rw-r--r-- root/root 11547 2020-11-11 17:36 ./usr/share/doc/toppic/copyright drwxr-xr-x root/root 0 2020-12-12 12:20 ./usr/share/man/ drwxr-xr-x root/root 0 2020-12-12 12:20 ./usr/share/man/man1/ -rw-r--r-- root/root 1427 2020-12-12 12:20 ./usr/share/man/man1/topdiff.1.gz lrwxrwxrwx root/root 0 2020-12-12 12:20 ./usr/share/man/man1/topdiff_gui.1.gz -> topdiff.1.gz -rw-r--r-- root/root 1782 2020-12-12 12:20 ./usr/share/man/man1/topfd.1.gz -rw-r--r-- root/root 3535 2020-12-12 12:20 ./usr/share/man/man1/topmg.1.gz lrwxrwxrwx root/root 0 2020-12-12 12:20 ./usr/share/man/man1/topmg_gui.1.gz -> topmg.1.gz -rw-r--r-- root/root 3706 2020-12-12 12:20 ./usr/share/man/man1/toppic.1.gz lrwxrwxrwx root/root 0 2020-12-12 12:20 ./usr/share/man/man1/toppic_gui.1.gz -> toppic.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: ppc64el Build Type: any Build-Space: n/a Build-Time: 877 Distribution: hirsute-proposed Host Architecture: ppc64el Install-Time: 65 Job: toppic_1.3.0+dfsg1-4build1.dsc Machine Architecture: ppc64el Package: toppic Package-Time: 945 Source-Version: 1.3.0+dfsg1-4build1 Space: n/a Status: successful Version: 1.3.0+dfsg1-4build1 -------------------------------------------------------------------------------- Finished at 2020-12-13T06:42:43Z Build needed 00:15:45, no disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=hirsute --arch=ppc64el PACKAGEBUILD-20404003 Scanning for processes to kill in build PACKAGEBUILD-20404003