https://launchpad.net/ubuntu/+source/tracetuner/3.0.6~beta+dfsg-3/+build/20367198 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-ppc64el-020 4.15.0-126-generic #129-Ubuntu SMP Mon Nov 23 18:53:23 UTC 2020 ppc64le Buildd toolchain package versions: launchpad-buildd_193~468~ubuntu18.04.1 python3-lpbuildd_193~468~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 5 Dec 05:17:50 ntpdate[2000]: adjust time server 10.211.37.1 offset -0.000866 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=hirsute --arch=ppc64el PACKAGEBUILD-20367198 --image-type chroot /home/buildd/filecache-default/562b8b0d733db483afe9600af35c69ac54075a74 Creating target for build PACKAGEBUILD-20367198 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=hirsute --arch=ppc64el PACKAGEBUILD-20367198 Starting target for build PACKAGEBUILD-20367198 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=hirsute --arch=ppc64el PACKAGEBUILD-20367198 'deb http://ftpmaster.internal/ubuntu hirsute main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-security main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-updates main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-20367198 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=hirsute --arch=ppc64el PACKAGEBUILD-20367198 Updating target for build PACKAGEBUILD-20367198 Get:1 http://ftpmaster.internal/ubuntu hirsute InRelease [269 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed InRelease [121 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main ppc64el Packages [1350 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main Translation-en [511 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/universe ppc64el Packages [12.6 MB] Get:8 http://ftpmaster.internal/ubuntu hirsute/universe Translation-en [5350 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el Packages [73.8 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main Translation-en [37.9 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/universe ppc64el Packages [357 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/universe Translation-en [227 kB] Fetched 21.1 MB in 8s (2535 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libisl23 libperl5.32 perl-modules-5.32 The following packages will be upgraded: adduser apt base-files base-passwd bash binutils binutils-common binutils-powerpc64le-linux-gnu bsdutils coreutils cpp-10 dash dpkg dpkg-dev fakeroot g++-10 gcc-10 gcc-10-base grep init init-system-helpers libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libfakeroot libgcc-10-dev libgcc-s1 libgcrypt20 libgomp1 libgssapi-krb5-2 libidn2-0 libip4tc2 libitm1 libk5crypto3 libkrb5-3 libkrb5support0 liblsan0 liblz4-1 libmount1 libmpc3 libncurses6 libncursesw6 libnpth0 libpcre2-8-0 libquadmath0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libstdc++-10-dev libstdc++6 libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libtsan0 libubsan1 libudev1 libuuid1 linux-libc-dev login mount ncurses-base ncurses-bin passwd perl perl-base readline-common systemd systemd-sysv systemd-timesyncd sysvinit-utils tar tzdata util-linux 98 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 171 MB of archives. After this operation, 462 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcrypt-dev ppc64el 1:4.4.17-1ubuntu1 [131 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libc6-dev ppc64el 2.32-0ubuntu5 [2131 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libc-dev-bin ppc64el 2.32-0ubuntu5 [31.4 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcrypt1 ppc64el 1:4.4.17-1ubuntu1 [99.8 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el linux-libc-dev ppc64el 5.8.0-31.33+21.04.1 [1131 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libtirpc-common all 1.2.6-3 [7444 B] Get:7 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libk5crypto3 ppc64el 1.17-10ubuntu1 [105 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgssapi-krb5-2 ppc64el 1.17-10ubuntu1 [135 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libkrb5-3 ppc64el 1.17-10ubuntu1 [375 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libkrb5support0 ppc64el 1.17-10ubuntu1 [34.8 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libtirpc-dev ppc64el 1.2.6-3 [208 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libtirpc3 ppc64el 1.2.6-3 [89.2 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libisl23 ppc64el 0.23-1 [713 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libcc1-0 ppc64el 10.2.0-20ubuntu1 [42.2 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el gcc-10-base ppc64el 10.2.0-20ubuntu1 [19.6 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libgcc-s1 ppc64el 10.2.0-20ubuntu1 [30.1 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libgomp1 ppc64el 10.2.0-20ubuntu1 [108 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libitm1 ppc64el 10.2.0-20ubuntu1 [28.6 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libatomic1 ppc64el 10.2.0-20ubuntu1 [9992 B] Get:20 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libasan6 ppc64el 10.2.0-20ubuntu1 [2103 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el liblsan0 ppc64el 10.2.0-20ubuntu1 [847 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libtsan0 ppc64el 10.2.0-20ubuntu1 [2030 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libubsan1 ppc64el 10.2.0-20ubuntu1 [799 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libquadmath0 ppc64el 10.2.0-20ubuntu1 [149 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el g++-10 ppc64el 10.2.0-20ubuntu1 [41.1 MB] Get:26 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libstdc++-10-dev ppc64el 10.2.0-20ubuntu1 [1793 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libgcc-10-dev ppc64el 10.2.0-20ubuntu1 [1252 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el gcc-10 ppc64el 10.2.0-20ubuntu1 [44.0 MB] Get:29 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el cpp-10 ppc64el 10.2.0-20ubuntu1 [37.6 MB] Get:30 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libstdc++6 ppc64el 10.2.0-20ubuntu1 [540 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libmpc3 ppc64el 1.2.0-1 [47.1 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libctf0 ppc64el 2.35.1-3ubuntu1 [53.5 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libctf-nobfd0 ppc64el 2.35.1-3ubuntu1 [54.5 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libbinutils ppc64el 2.35.1-3ubuntu1 [531 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute/main ppc64el binutils-common ppc64el 2.35.1-3ubuntu1 [212 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute/main ppc64el binutils ppc64el 2.35.1-3ubuntu1 [3372 B] Get:37 http://ftpmaster.internal/ubuntu hirsute/main ppc64el binutils-powerpc64le-linux-gnu ppc64el 2.35.1-3ubuntu1 [1805 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libc6 ppc64el 2.32-0ubuntu5 [2673 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main ppc64el base-files ppc64el 11ubuntu16 [60.7 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute/main ppc64el bash ppc64el 5.1~rc3-1ubuntu1 [755 kB] Get:41 http://ftpmaster.internal/ubuntu hirsute/main ppc64el bsdutils ppc64el 1:2.36.1-1ubuntu2 [91.9 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute/main ppc64el coreutils ppc64el 8.32-4ubuntu1 [1409 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute/main ppc64el tar ppc64el 1.32+dfsg-1 [317 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dpkg ppc64el 1.20.5ubuntu3 [1199 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dash ppc64el 0.5.11+git20200708+dd9ef66+really0.5.10.2-0ubuntu1 [101 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main ppc64el grep ppc64el 3.6-1 [160 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute/main ppc64el login ppc64el 1:4.8.1-1ubuntu7 [223 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libncursesw6 ppc64el 6.2+20201114-1 [153 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libncurses6 ppc64el 6.2+20201114-1 [122 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libtinfo6 ppc64el 6.2+20201114-1 [104 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el ncurses-bin ppc64el 6.2+20201114-1 [180 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main ppc64el perl-modules-5.32 all 5.32.0-5 [2754 kB] Get:53 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libperl5.32 ppc64el 5.32.0-5 [4037 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main ppc64el perl ppc64el 5.32.0-5 [225 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute/main ppc64el perl-base ppc64el 5.32.0-5 [1546 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute/main ppc64el util-linux ppc64el 2.36.1-1ubuntu2 [1118 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdebconfclient0 ppc64el 0.255ubuntu1 [6148 B] Get:58 http://ftpmaster.internal/ubuntu hirsute/main ppc64el base-passwd ppc64el 3.5.48 [49.6 kB] Get:59 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el init-system-helpers all 1.59 [38.2 kB] Get:60 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libc-bin ppc64el 2.32-0ubuntu5 [637 kB] Get:61 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el ncurses-base all 6.2+20201114-1 [18.5 kB] Get:62 http://ftpmaster.internal/ubuntu hirsute/main ppc64el sysvinit-utils ppc64el 2.96-5ubuntu1 [22.8 kB] Get:63 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libgcrypt20 ppc64el 1.8.7-2ubuntu1 [444 kB] Get:64 http://ftpmaster.internal/ubuntu hirsute/main ppc64el liblz4-1 ppc64el 1.9.3-0ubuntu1 [70.0 kB] Get:65 http://ftpmaster.internal/ubuntu hirsute/main ppc64el systemd-sysv ppc64el 246.6-5ubuntu1 [10.3 kB] Get:66 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libaudit-common all 1:2.8.5-3ubuntu2 [4092 B] Get:67 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcap-ng0 ppc64el 0.7.9-2.2build1 [11.7 kB] Get:68 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libaudit1 ppc64el 1:2.8.5-3ubuntu2 [42.5 kB] Get:69 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libpcre2-8-0 ppc64el 10.35-2 [204 kB] Get:70 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libselinux1 ppc64el 3.1-2build1 [81.9 kB] Get:71 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsemanage-common all 3.1-1build1 [10.1 kB] Get:72 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsemanage1 ppc64el 3.1-1build1 [97.0 kB] Get:73 http://ftpmaster.internal/ubuntu hirsute/main ppc64el passwd ppc64el 1:4.8.1-1ubuntu7 [804 kB] Get:74 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el adduser all 3.118ubuntu3 [163 kB] Get:75 http://ftpmaster.internal/ubuntu hirsute/main ppc64el systemd-timesyncd ppc64el 246.6-5ubuntu1 [28.8 kB] Get:76 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libapparmor1 ppc64el 3.0.0-0ubuntu4 [39.9 kB] Get:77 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcap2 ppc64el 1:2.44-1 [19.8 kB] Get:78 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libblkid1 ppc64el 2.36.1-1ubuntu2 [151 kB] Get:79 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libudev1 ppc64el 246.6-5ubuntu1 [82.8 kB] Get:80 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libdevmapper1.02.1 ppc64el 2:1.02.167-1ubuntu4 [157 kB] Get:81 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libuuid1 ppc64el 2.36.1-1ubuntu2 [23.1 kB] Get:82 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcryptsetup12 ppc64el 2:2.3.4-1ubuntu1 [228 kB] Get:83 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libidn2-0 ppc64el 2.3.0-4 [55.3 kB] Get:84 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libip4tc2 ppc64el 1.8.5-3ubuntu4 [22.0 kB] Get:85 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libmount1 ppc64el 2.36.1-1ubuntu2 [166 kB] Get:86 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libseccomp2 ppc64el 2.4.3-1ubuntu5 [48.0 kB] Get:87 http://ftpmaster.internal/ubuntu hirsute/main ppc64el mount ppc64el 2.36.1-1ubuntu2 [128 kB] Get:88 http://ftpmaster.internal/ubuntu hirsute/main ppc64el systemd ppc64el 246.6-5ubuntu1 [4893 kB] Get:89 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsystemd0 ppc64el 246.6-5ubuntu1 [315 kB] Get:90 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libapt-pkg6.0 ppc64el 2.1.12 [927 kB] Get:91 http://ftpmaster.internal/ubuntu hirsute/main ppc64el apt ppc64el 2.1.12 [1328 kB] Get:92 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el init ppc64el 1.59 [6168 B] Get:93 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsmartcols1 ppc64el 2.36.1-1ubuntu2 [107 kB] Get:94 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el readline-common all 8.1~rc3-1 [54.1 kB] Get:95 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libreadline8 ppc64el 8.1~rc3-1 [151 kB] Get:96 http://ftpmaster.internal/ubuntu hirsute/main ppc64el tzdata all 2020d-1ubuntu1 [293 kB] Get:97 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dpkg-dev all 1.20.5ubuntu3 [758 kB] Get:98 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdpkg-perl all 1.20.5ubuntu3 [232 kB] Get:99 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el libfakeroot ppc64el 1.25.3-1.1 [28.6 kB] Get:100 http://ftpmaster.internal/ubuntu hirsute-proposed/main ppc64el fakeroot ppc64el 1.25.3-1.1 [66.4 kB] Get:101 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libnpth0 ppc64el 1.6-3 [8640 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 171 MB in 51s (3367 kB/s) (Reading database ... 12922 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.17-1ubuntu1_ppc64el.deb ... Unpacking libcrypt-dev:ppc64el (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Preparing to unpack .../libc6-dev_2.32-0ubuntu5_ppc64el.deb ... Unpacking libc6-dev:ppc64el (2.32-0ubuntu5) over (2.32-0ubuntu3) ... Preparing to unpack .../libc-dev-bin_2.32-0ubuntu5_ppc64el.deb ... Unpacking libc-dev-bin (2.32-0ubuntu5) over (2.32-0ubuntu3) ... Preparing to unpack .../libcrypt1_1%3a4.4.17-1ubuntu1_ppc64el.deb ... Unpacking libcrypt1:ppc64el (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Setting up libcrypt1:ppc64el (1:4.4.17-1ubuntu1) ... (Reading database ... 12921 files and directories currently installed.) Preparing to unpack .../00-linux-libc-dev_5.8.0-31.33+21.04.1_ppc64el.deb ... Unpacking linux-libc-dev:ppc64el (5.8.0-31.33+21.04.1) over (5.8.0-25.26) ... Preparing to unpack .../01-libtirpc-common_1.2.6-3_all.deb ... Unpacking libtirpc-common (1.2.6-3) over (1.2.6-1build1) ... 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Setting up binutils-common:ppc64el (2.35.1-3ubuntu1) ... Setting up linux-libc-dev:ppc64el (5.8.0-31.33+21.04.1) ... Setting up libctf-nobfd0:ppc64el (2.35.1-3ubuntu1) ... Setting up libnpth0:ppc64el (1.6-3) ... Setting up libgomp1:ppc64el (10.2.0-20ubuntu1) ... Setting up libfakeroot:ppc64el (1.25.3-1.1) ... Setting up libasan6:ppc64el (10.2.0-20ubuntu1) ... Setting up libkrb5support0:ppc64el (1.17-10ubuntu1) ... Setting up tzdata (2020d-1ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Dec 5 05:19:23 UTC 2020. Universal Time is now: Sat Dec 5 05:19:23 UTC 2020. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.25.3-1.1) ... Setting up libncurses6:ppc64el (6.2+20201114-1) ... Setting up libquadmath0:ppc64el (10.2.0-20ubuntu1) ... Setting up libmpc3:ppc64el (1.2.0-1) ... Setting up libatomic1:ppc64el (10.2.0-20ubuntu1) ... Setting up libncursesw6:ppc64el (6.2+20201114-1) ... Setting up libk5crypto3:ppc64el (1.17-10ubuntu1) ... 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Setting up libtirpc3:ppc64el (1.2.6-3) ... Setting up binutils (2.35.1-3ubuntu1) ... Setting up dpkg-dev (1.20.5ubuntu3) ... Setting up libtirpc-dev:ppc64el (1.2.6-3) ... Setting up gcc-10 (10.2.0-20ubuntu1) ... Setting up libc6-dev:ppc64el (2.32-0ubuntu5) ... Setting up libstdc++-10-dev:ppc64el (10.2.0-20ubuntu1) ... Setting up g++-10 (10.2.0-20ubuntu1) ... Processing triggers for libc-bin (2.32-0ubuntu5) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-20367198 ppc64el hirsute-proposed -c chroot:build-PACKAGEBUILD-20367198 --arch=ppc64el --dist=hirsute-proposed --nolog 'tracetuner_3.0.6~beta+dfsg-3.dsc' Initiating build PACKAGEBUILD-20367198 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-126-generic #129-Ubuntu SMP Mon Nov 23 18:53:23 UTC 2020 ppc64le sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-ppc64el-020.buildd +==============================================================================+ | tracetuner 3.0.6~beta+dfsg-3 (ppc64el) Sat, 05 Dec 2020 05:19:23 +0000 | +==============================================================================+ Package: tracetuner Version: 3.0.6~beta+dfsg-3 Source Version: 3.0.6~beta+dfsg-3 Distribution: hirsute-proposed Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-20367198/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- tracetuner_3.0.6~beta+dfsg-3.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/tracetuner-QJnOG4/tracetuner-3.0.6~beta+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/tracetuner-QJnOG4' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-9WzLQZ/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-9WzLQZ/apt_archive ./ InRelease Get:2 copy:/<>/resolver-9WzLQZ/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-9WzLQZ/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-9WzLQZ/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-9WzLQZ/apt_archive ./ Packages [434 B] Fetched 1740 B in 0s (94.6 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-9WzLQZ/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14856 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-tracetuner-dummy' in '/<>/resolver-9WzLQZ/apt_archive/sbuild-build-depends-tracetuner-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-tracetuner-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-9WzLQZ/apt_archive ./ InRelease Get:2 copy:/<>/resolver-9WzLQZ/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-9WzLQZ/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-9WzLQZ/apt_archive ./ Sources [500 B] Get:5 copy:/<>/resolver-9WzLQZ/apt_archive ./ Packages [581 B] Fetched 2044 B in 0s (104 kB/s) Reading package lists... Reading package lists... Install tracetuner build dependencies (apt-based resolver) ---------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf sbuild-build-depends-tracetuner-dummy zlib1g-dev 0 upgraded, 34 newly installed, 0 to remove and 0 not upgraded. Need to get 18.0 MB of archives. After this operation, 75.9 MB of additional disk space will be used. Get:1 copy:/<>/resolver-9WzLQZ/apt_archive ./ sbuild-build-depends-tracetuner-dummy 0.invalid.0 [872 B] Get:2 http://ftpmaster.internal/ubuntu hirsute/main ppc64el bsdextrautils ppc64el 2.36.1-1ubuntu2 [83.5 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libuchardet0 ppc64el 0.0.7-1 [71.0 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute/main ppc64el groff-base ppc64el 1.22.4-5 [922 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libpipeline1 ppc64el 1.5.3-1 [29.6 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main ppc64el man-db ppc64el 2.9.3-2 [1148 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libmagic-mgc ppc64el 1:5.39-3 [228 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libmagic1 ppc64el 1:5.39-3 [93.4 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute/main ppc64el file ppc64el 1:5.39-3 [24.7 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libelf1 ppc64el 0.182-1 [52.3 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libglib2.0-0 ppc64el 2.66.3-2 [1408 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libicu67 ppc64el 67.1-4 [8812 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libxml2 ppc64el 2.9.10+dfsg-6.3 [655 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main ppc64el gettext-base ppc64el 0.19.8.1-10build1 [52.5 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsigsegv2 ppc64el 2.12-2build1 [14.4 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute/main ppc64el m4 ppc64el 1.4.18-4 [210 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute/main ppc64el autoconf all 2.69-11.1 [321 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute/main ppc64el autotools-dev all 20180224.1 [39.6 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute/main ppc64el automake all 1:1.16.3-1ubuntu1 [552 kB] Get:20 http://ftpmaster.internal/ubuntu hirsute/main ppc64el autopoint all 0.19.8.1-10build1 [412 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libtool all 2.4.6-14 [161 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dh-autoreconf all 19 [16.1 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libdebhelper-perl all 13.2.1ubuntu1 [63.6 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libarchive-zip-perl all 1.68-1 [90.2 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libsub-override-perl all 0.09-2 [9532 B] Get:26 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:28 http://ftpmaster.internal/ubuntu hirsute/main ppc64el dwz ppc64el 0.13-5 [136 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute/main ppc64el libcroco3 ppc64el 0.6.13-1 [92.1 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main ppc64el gettext ppc64el 0.19.8.1-10build1 [959 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main ppc64el intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute/main ppc64el po-debconf all 1.0.21 [233 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute/main ppc64el debhelper all 13.2.1ubuntu1 [879 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute/main ppc64el zlib1g-dev ppc64el 1:1.2.11.dfsg-2ubuntu4 [166 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.0 MB in 2s (7240 kB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 14856 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-1ubuntu2_ppc64el.deb ... Unpacking bsdextrautils (2.36.1-1ubuntu2) ... Selecting previously unselected package libuchardet0:ppc64el. Preparing to unpack .../01-libuchardet0_0.0.7-1_ppc64el.deb ... Unpacking libuchardet0:ppc64el (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-5_ppc64el.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:ppc64el. Preparing to unpack .../03-libpipeline1_1.5.3-1_ppc64el.deb ... Unpacking libpipeline1:ppc64el (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.3-2_ppc64el.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../05-libmagic-mgc_1%3a5.39-3_ppc64el.deb ... Unpacking libmagic-mgc (1:5.39-3) ... 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Selecting previously unselected package gettext-base. Preparing to unpack .../12-gettext-base_0.19.8.1-10build1_ppc64el.deb ... Unpacking gettext-base (0.19.8.1-10build1) ... Selecting previously unselected package libsigsegv2:ppc64el. Preparing to unpack .../13-libsigsegv2_2.12-2build1_ppc64el.deb ... Unpacking libsigsegv2:ppc64el (2.12-2build1) ... Selecting previously unselected package m4. Preparing to unpack .../14-m4_1.4.18-4_ppc64el.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../15-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../16-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../17-automake_1%3a1.16.3-1ubuntu1_all.deb ... Unpacking automake (1:1.16.3-1ubuntu1) ... Selecting previously unselected package autopoint. 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Selecting previously unselected package po-debconf. Preparing to unpack .../30-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../31-debhelper_13.2.1ubuntu1_all.deb ... Unpacking debhelper (13.2.1ubuntu1) ... Selecting previously unselected package zlib1g-dev:ppc64el. Preparing to unpack .../32-zlib1g-dev_1%3a1.2.11.dfsg-2ubuntu4_ppc64el.deb ... Unpacking zlib1g-dev:ppc64el (1:1.2.11.dfsg-2ubuntu4) ... Selecting previously unselected package sbuild-build-depends-tracetuner-dummy. Preparing to unpack .../33-sbuild-build-depends-tracetuner-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-tracetuner-dummy (0.invalid.0) ... Setting up libpipeline1:ppc64el (1.5.3-1) ... Setting up bsdextrautils (2.36.1-1ubuntu2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:ppc64el (67.1-4) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:ppc64el (2.66.3-2) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.2.1ubuntu1) ... Setting up libmagic1:ppc64el (1:5.39-3) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up file (1:5.39-3) ... Setting up autotools-dev (20180224.1) ... Setting up libsigsegv2:ppc64el (2.12-2build1) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up zlib1g-dev:ppc64el (1:1.2.11.dfsg-2ubuntu4) ... Setting up libuchardet0:ppc64el (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:ppc64el (0.182-1) ... Setting up libxml2:ppc64el (2.9.10+dfsg-6.3) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libtool (2.4.6-14) ... Setting up m4 (1.4.18-4) ... Setting up libcroco3:ppc64el (0.6.13-1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up automake (1:1.16.3-1ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10build1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up po-debconf (1.0.21) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13.2.1ubuntu1) ... Setting up sbuild-build-depends-tracetuner-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.32-0ubuntu5) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-126-generic ppc64el (ppc64le) Toolchain package versions: binutils_2.35.1-3ubuntu1 dpkg-dev_1.20.5ubuntu3 g++-10_10.2.0-20ubuntu1 gcc-10_10.2.0-20ubuntu1 libc6-dev_2.32-0ubuntu5 libstdc++-10-dev_10.2.0-20ubuntu1 libstdc++6_10.2.0-20ubuntu1 linux-libc-dev_5.8.0-31.33+21.04.1 Package versions: adduser_3.118ubuntu3 advancecomp_2.1-2.1build1 apt_2.1.12 autoconf_2.69-11.1 automake_1:1.16.3-1ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu16 base-passwd_3.5.48 bash_5.1~rc3-1ubuntu1 binutils_2.35.1-3ubuntu1 binutils-common_2.35.1-3ubuntu1 binutils-powerpc64le-linux-gnu_2.35.1-3ubuntu1 bsdextrautils_2.36.1-1ubuntu2 bsdutils_1:2.36.1-1ubuntu2 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 ca-certificates_20200601 coreutils_8.32-4ubuntu1 cpp_4:10.2.0-1ubuntu1 cpp-10_10.2.0-20ubuntu1 dash_0.5.11+git20200708+dd9ef66+really0.5.10.2-0ubuntu1 debconf_1.5.74 debhelper_13.2.1ubuntu1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3ubuntu1 dpkg_1.20.5ubuntu3 dpkg-dev_1.20.5ubuntu3 dwz_0.13-5 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.7.0-1ubuntu2 g++_4:10.2.0-1ubuntu1 g++-10_10.2.0-20ubuntu1 gcc_4:10.2.0-1ubuntu1 gcc-10_10.2.0-20ubuntu1 gcc-10-base_10.2.0-20ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 hostname_3.23 init_1.59 init-system-helpers_1.59 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapparmor1_3.0.0-0ubuntu4 libapt-pkg6.0_2.1.12 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2build20.10.0 libasan6_10.2.0-20ubuntu1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-20ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3ubuntu2 libaudit1_1:2.8.5-3ubuntu2 libbinutils_2.35.1-3ubuntu1 libblkid1_2.36.1-1ubuntu2 libbz2-1.0_1.0.8-4ubuntu2 libc-bin_2.32-0ubuntu5 libc-dev-bin_2.32-0ubuntu5 libc6_2.32-0ubuntu5 libc6-dev_2.32-0ubuntu5 libcap-ng0_0.7.9-2.2build1 libcap2_1:2.44-1 libcc1-0_10.2.0-20ubuntu1 libcom-err2_1.45.6-1ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1ubuntu1 libcrypt1_1:4.4.17-1ubuntu1 libcryptsetup12_2:2.3.4-1ubuntu1 libctf-nobfd0_2.35.1-3ubuntu1 libctf0_2.35.1-3ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu3 libdebconfclient0_0.255ubuntu1 libdebhelper-perl_13.2.1ubuntu1 libdevmapper1.02.1_2:1.02.167-1ubuntu4 libdpkg-perl_1.20.5ubuntu3 libelf1_0.182-1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.25.3-1.1 libffi8ubuntu1_3.4~20200819gead65ca871-0ubuntu3 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.0-20ubuntu1 libgcc-s1_10.2.0-20ubuntu1 libgcrypt20_1.8.7-2ubuntu1 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.3-2 libgmp10_2:6.2.0+dfsg-6ubuntu1 libgnutls30_3.6.15-4ubuntu2 libgomp1_10.2.0-20ubuntu1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10ubuntu1 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-4 libip4tc2_1.8.5-3ubuntu4 libisl22_0.22.1-1 libisl23_0.23-1 libitm1_10.2.0-20ubuntu1 libjson-c5_0.15-1 libk5crypto3_1.17-10ubuntu1 libkeyutils1_1.6.1-2ubuntu1 libkmod2_27+20200310-2ubuntu1 libkrb5-3_1.17-10ubuntu1 libkrb5support0_1.17-10ubuntu1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10.2.0-20ubuntu1 liblz4-1_1.9.3-0ubuntu1 liblzma5_5.2.4-1ubuntu1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-1ubuntu2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncurses6_6.2+20201114-1 libncursesw6_6.2+20201114-1 libnettle8_3.6-2 libnpth0_1.6-3 libnsl-dev_1.3.0-0ubuntu3 libnsl2_1.3.0-0ubuntu3 libnss-nis_3.1-0ubuntu4 libnss-nisplus_1.3-0ubuntu4 libp11-kit0_0.23.21-2build1 libpam-modules_1.3.1-5ubuntu6 libpam-modules-bin_1.3.1-5ubuntu6 libpam-runtime_1.3.1-5ubuntu6 libpam0g_1.3.1-5ubuntu6 libpcre2-8-0_10.35-2 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libpng16-16_1.6.37-3 libprocps8_2:3.3.16-5ubuntu2 libquadmath0_10.2.0-20ubuntu1 libreadline8_8.1~rc3-1 libseccomp2_2.4.3-1ubuntu5 libselinux1_3.1-2build1 libsemanage-common_3.1-1build1 libsemanage1_3.1-1build1 libsepol1_3.1-1 libsigsegv2_2.12-2build1 libsmartcols1_2.36.1-1ubuntu2 libsqlite3-0_3.33.0-1 libss2_1.45.6-1ubuntu1 libssl1.1_1.1.1f-1ubuntu4 libstdc++-10-dev_10.2.0-20ubuntu1 libstdc++6_10.2.0-20ubuntu1 libsub-override-perl_0.09-2 libsystemd0_246.6-5ubuntu1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libtsan0_10.2.0-20ubuntu1 libubsan1_10.2.0-20ubuntu1 libuchardet0_0.0.7-1 libudev1_246.6-5ubuntu1 libunistring2_0.9.10-4 libuuid1_2.36.1-1ubuntu2 libxml2_2.9.10+dfsg-6.3 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.8.0-31.33+21.04.1 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu7 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36.1-1ubuntu2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 openssl_1.1.1f-1ubuntu4 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu7 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.30_5.30.3-4 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4build1 pkgbinarymangler_146 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu2 readline-common_8.1~rc3-1 rpcsvc-proto_1.4.2-0ubuntu4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-tracetuner-dummy_0.invalid.0 sed_4.7-1ubuntu1 sensible-utils_0.0.13 systemd_246.6-5ubuntu1 systemd-sysv_246.6-5ubuntu1 systemd-timesyncd_246.6-5ubuntu1 sysvinit-utils_2.96-5ubuntu1 tar_1.32+dfsg-1 tzdata_2020d-1ubuntu1 ubuntu-keyring_2020.06.17.1 util-linux_2.36.1-1ubuntu2 xz-utils_5.2.4-1ubuntu1 zlib1g_1:1.2.11.dfsg-2ubuntu4 zlib1g-dev_1:1.2.11.dfsg-2ubuntu4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Fri Dec 4 22:53:28 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./tracetuner_3.0.6~beta+dfsg-3.dsc dpkg-source: info: extracting tracetuner in /<>/tracetuner-3.0.6~beta+dfsg dpkg-source: info: unpacking tracetuner_3.0.6~beta+dfsg.orig.tar.xz dpkg-source: info: unpacking tracetuner_3.0.6~beta+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying fix_format_security.patch dpkg-source: info: applying cross.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-20367198 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-20367198 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-20367198 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package tracetuner dpkg-buildpackage: info: source version 3.0.6~beta+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean --sourcedirectory=src --no-parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg' dh_auto_clean install -d /<>/tracetuner-3.0.6\~beta\+dfsg/debian/.debhelper/generated/_source/home cd src && make -j1 clean make[2]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg/src' cd compute_qv; make clean make[3]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg/src/compute_qv' make[3]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg/src/compute_qv' cd mktrain; make clean make[3]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mktrain' make[3]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mktrain' cd mklut; make clean make[3]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mklut' make[3]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mklut' cd mkchk; make clean make[3]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mkchk' make[3]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mkchk' make[2]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg/src' rm -rf lib obj rel make[1]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg' dh_autoreconf_clean -O--sourcedirectory=src -O--no-parallel dh_clean -O--sourcedirectory=src -O--no-parallel rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/tracetuner.substvars debian/files rm -fr -- debian/tracetuner/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch --sourcedirectory=src --no-parallel dh_update_autotools_config -a -O--sourcedirectory=src -O--no-parallel dh_autoreconf -a -O--sourcedirectory=src -O--no-parallel dh_auto_configure -a -O--sourcedirectory=src -O--no-parallel install -d /<>/tracetuner-3.0.6\~beta\+dfsg/debian/.debhelper/generated/_source/home dh_auto_build -a -O--sourcedirectory=src -O--no-parallel cd src && make -j1 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg/src' for dir in compute_qv mktrain mklut mkchk ; \ do (cd $dir; make EXTRACFLAGS="-g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed" all); \ done make[2]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg/src/compute_qv' mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c main.c -o ../../obj/Linux/main.o In file included from /usr/include/string.h:519, from main.c:27: In function ‘strncpy’, inlined from ‘main’ at main.c:1397:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1400:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output may be truncated copying 256 bytes from a string of length 999 [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1421:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1376:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1386:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1485:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1391:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1692:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1676:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1663:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1644:21: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1636:21: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1587:21: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1580:21: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1572:21: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1546:21: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1450:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1376:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at main.c:1346:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c ../mktrain/Btk_match_data.c -o ../../obj/Linux/Btk_match_data.o ../mktrain/Btk_match_data.c: In function ‘contig_create.constprop’: ../mktrain/Btk_match_data.c:359:24: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 359 | contig->max_length = length; | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c ../mktrain/Btk_compute_match.c -o ../../obj/Linux/Btk_compute_match.o ../mktrain/Btk_compute_match.c: In function ‘find_best_region’: ../mktrain/Btk_compute_match.c:658:13: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 658 | else | ^~~~ ../mktrain/Btk_compute_match.c:660:10: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 660 | max=i; | ^~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c ../mktrain/Btk_sw.c -o ../../obj/Linux/Btk_sw.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_process_indels.c -o ../../obj/Linux/Btk_process_indels.o Btk_process_indels.c: In function ‘get_autocorrelation_indel_size’: Btk_process_indels.c:644:42: warning: variable ‘max_height’ set but not used [-Wunused-but-set-variable] 644 | float *ans[NUM_COLORS], height = 0., max_height = 0.; | ^~~~~~~~~~ Btk_process_indels.c:642:25: warning: variable ‘best_color’ set but not used [-Wunused-but-set-variable] 642 | int i, j, color, best_color, n=1; | ^~~~~~~~~~ In file included from /usr/include/string.h:519, from Btk_process_indels.c:33: In function ‘strncpy’, inlined from ‘Btk_process_indels’ at Btk_process_indels.c:2471:9: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin___strncpy_chk’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Btk_process_indels.c: In function ‘Btk_process_indels’: Btk_process_indels.c:2470:22: note: length computed here 2470 | prefix_len = strlen(options.file_name) - strlen(suffix); | ^~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_atod.c -o ../../obj/Linux/Btk_atod.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_compute_qv.c -o ../../obj/Linux/Btk_compute_qv.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_call_bases.c -o ../../obj/Linux/Btk_call_bases.o Btk_call_bases.c: In function ‘get_best_peak_color_and_index_by_base_and_location’: Btk_call_bases.c:2988:28: warning: variable ‘new_location’ set but not used [-Wunused-but-set-variable] 2988 | int new_peak_index, new_location = location; | ^~~~~~~~~~~~ Btk_call_bases.c: In function ‘call_peak_by_location_color_and_index’: Btk_call_bases.c:3199:41: warning: variable ‘r’ set but not used [-Wunused-but-set-variable] 3199 | int i = base_ind, jc = color, j, l, r, k; | ^ Btk_call_bases.c: In function ‘mark_called_peaks’: Btk_call_bases.c:3547:28: warning: variable ‘cd_length’ set but not used [-Wunused-but-set-variable] 3547 | int Case, cd_index, cd_length; | ^~~~~~~~~ Btk_call_bases.c:3547:18: warning: variable ‘cd_index’ set but not used [-Wunused-but-set-variable] 3547 | int Case, cd_index, cd_length; | ^~~~~~~~ Btk_call_bases.c: In function ‘Btk_call_bases’: Btk_call_bases.c:3697:32: warning: variable ‘cweight’ set but not used [-Wunused-but-set-variable] 3697 | double height2, nweight, cweight; | ^~~~~~~ Btk_call_bases.c:3697:23: warning: variable ‘nweight’ set but not used [-Wunused-but-set-variable] 3697 | double height2, nweight, cweight; | ^~~~~~~ Btk_call_bases.c:3691:14: warning: variable ‘debug’ set but not used [-Wunused-but-set-variable] 3691 | char *debug, base, *context=NULL; | ^~~~~ At top level: Btk_call_bases.c:117:21: warning: ‘gSpacEst0’ defined but not used [-Wunused-const-variable=] 117 | static const double gSpacEst0 = 12.0; | ^~~~~~~~~ Btk_call_bases.c: In function ‘insert_and_resolve_peaks’: Btk_call_bases.c:1124:47: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5 1124 | data->peak_list[j]->data_peak_ind = | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 1125 | data->peak_list[j]->data_peak_ind2 = j; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_process_raw_data.c -o ../../obj/Linux/Btk_process_raw_data.o Btk_process_raw_data.c: In function ‘estimate_spacing_variation_of_shifted_peaks’: Btk_process_raw_data.c:1142:26: warning: variable ‘cd1’ set but not used [-Wunused-but-set-variable] 1142 | ColorData *cd0, *cd1; | ^~~ Btk_process_raw_data.c:1142:20: warning: variable ‘cd0’ set but not used [-Wunused-but-set-variable] 1142 | ColorData *cd0, *cd1; | ^~~ Btk_process_raw_data.c: In function ‘make_DP_mobility_shifts’: Btk_process_raw_data.c:2299:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2299 | if (DEBUG_CURTIS && options->Verbose > 2 ) | ^~ Btk_process_raw_data.c:2300:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2300 | putc('o', stderr); fflush(stderr); | ^~~~~~ Btk_process_raw_data.c:2650:10: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 2650 | for ( color=0; color < NUM_COLORS; color++ ) | ^~~ Btk_process_raw_data.c:2652:14: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 2652 | fprintf(fp, " %8.3g\n", shift_err[i]); | ^~~~~~~ Btk_process_raw_data.c: In function ‘normalize_signals’: Btk_process_raw_data.c:2956:40: warning: ordered comparison of pointer with integer zero [-Wpedantic] 2956 | norm_factor[i] = (num_peaks>0) ? ave_int[i][m] : -1; | ^ Btk_process_raw_data.c: In function ‘make_multicomponent_iteration’: Btk_process_raw_data.c:3305:21: warning: variable ‘best_pos’ set but not used [-Wunused-but-set-variable] 3305 | int best_pos; | ^~~~~~~~ Btk_process_raw_data.c:3247:15: warning: variable ‘det4’ set but not used [-Wunused-but-set-variable] 3247 | float det4; | ^~~~ Btk_process_raw_data.c: In function ‘make_DP_mobility_shifts.isra’: Btk_process_raw_data.c:2567:17: warning: array subscript -1 is outside array bounds of ‘float[6]’ [-Warray-bounds] 2567 | fpoly(peaks[i]->ipos+shift_flag[color], powers-1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2568 | POLYFIT_DEGREE+1); | ~~~~~~~~~~~~~~~~~ Btk_process_raw_data.c:1992:19: note: while referencing ‘powers’ 1992 | float powers[POLYFIT_DEGREE+1]; | ^~~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c util.c -o ../../obj/Linux/util.o util.c: In function ‘mobShiftQuality’: util.c:980:17: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 980 | int count[MAX_CHUNKS]; | ^~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c nr.c -o ../../obj/Linux/nr.o nr.c: In function ‘gaussj’: nr.c:487:6: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 487 | if (ipiv[j] != 1) | ^~ nr.c:497:3: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 497 | ++(ipiv[icol]); | ^~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_process_peaks.c -o ../../obj/Linux/Btk_process_peaks.o Btk_process_peaks.c: In function ‘colordata_detect_peaks’: Btk_process_peaks.c:524:45: warning: variable ‘relative_width’ set but not used [-Wunused-but-set-variable] 524 | sum_peak_width, average10_width, relative_width; | ^~~~~~~~~~~~~~ Btk_process_peaks.c: In function ‘add_one_peak’: Btk_process_peaks.c:2307:35: warning: variable ‘p2’ set but not used [-Wunused-but-set-variable] 2307 | Peak peak0, peak1, *p0, *p1, *p2; | ^~ Btk_process_peaks.c:2307:17: warning: variable ‘peak1’ set but not used [-Wunused-but-set-variable] 2307 | Peak peak0, peak1, *p0, *p1, *p2; | ^~~~~ Btk_process_peaks.c:2307:10: warning: variable ‘peak0’ set but not used [-Wunused-but-set-variable] 2307 | Peak peak0, peak1, *p0, *p1, *p2; | ^~~~~ Btk_process_peaks.c: In function ‘fit_single_peak’: Btk_process_peaks.c:2651:45: warning: variable ‘x2’ set but not used [-Wunused-but-set-variable] 2651 | double sum_exp = 0., sum_exp2 = 0., x2, B; | ^~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_qv_io.c -o ../../obj/Linux/Btk_qv_io.o Btk_qv_io.c: In function ‘Btk_read_sample_file’: Btk_qv_io.c:770:46: warning: ordered comparison of pointer with integer zero [-Wpedantic] 770 | if ((options.inp_phd == 0) && (num_bases > 0)) { | ^ Btk_qv_io.c:649:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 649 | fread(magic, 1, 2, fp); | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from Btk_qv_io.c:29: In function ‘strncpy’, inlined from ‘output_scf_file’ at Btk_qv_io.c:2636:5: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_compute_tp.c -o ../../obj/Linux/Btk_compute_tp.o Btk_compute_tp.c: In function ‘get_peak_height_ratio’: Btk_compute_tp.c:340:58: warning: variable ‘bad_ipos’ set but not used [-Wunused-but-set-variable] 340 | double max_uncalled_ipos = -1, min_called_ipos = -1, bad_ipos; | ^~~~~~~~ Btk_compute_tp.c: In function ‘get_peak_spacing_ratio’: Btk_compute_tp.c:394:17: warning: variable ‘bad_ipos’ set but not used [-Wunused-but-set-variable] 394 | double psr, bad_ipos, ipos; | ^~~~~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_compute_tpars.c -o ../../obj/Linux/Btk_compute_tpars.o Btk_compute_tpars.c: In function ‘data_create’: Btk_compute_tpars.c:215:33: warning: argument to ‘sizeof’ in ‘memset’ call is the same expression as the destination; did you mean to dereference it? [-Wsizeof-pointer-memaccess] 215 | (void)memset(data, 0, sizeof(data)); | ^ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_get_mixed_bases.c -o ../../obj/Linux/Btk_get_mixed_bases.o Btk_get_mixed_bases.c: In function ‘mixed_base’: Btk_get_mixed_bases.c:142:10: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 142 | else if (((b1 == 'G') && (b2 == 'T')) || ((b1 == 'T') && (b2 == 'G'))) | ^~ Btk_get_mixed_bases.c:145:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 145 | return 'N'; | ^~~~~~ Btk_get_mixed_bases.c: In function ‘find_alternative_peaks’: Btk_get_mixed_bases.c:473:34: warning: ordered comparison of pointer with integer zero [-Wpedantic] 473 | if ((num_peaks_found > 0) && | ^ Btk_get_mixed_bases.c: In function ‘call_mixed_bases’: Btk_get_mixed_bases.c:744:55: warning: variable ‘cweight’ set but not used [-Wunused-but-set-variable] 744 | double ratio, ave_wiheight, wiheight, nweight=1., cweight=1.; | ^~~~~~~ Btk_get_mixed_bases.c:744:43: warning: variable ‘nweight’ set but not used [-Wunused-but-set-variable] 744 | double ratio, ave_wiheight, wiheight, nweight=1., cweight=1.; | ^~~~~~~ Btk_get_mixed_bases.c:740:24: warning: variable ‘pos’ set but not used [-Wunused-but-set-variable] 740 | int i, j, k, n, pos, jbest, kbest, curr_num2, prev_right_bound=0; | ^~~ Btk_get_mixed_bases.c:739:25: warning: variable ‘context’ set but not used [-Wunused-but-set-variable] 739 | char base, base2,*context = NULL; | ^~~~~~~ Btk_get_mixed_bases.c:739:18: warning: variable ‘base2’ set but not used [-Wunused-but-set-variable] 739 | char base, base2,*context = NULL; | ^~~~~ Btk_get_mixed_bases.c:739:12: warning: variable ‘base’ set but not used [-Wunused-but-set-variable] 739 | char base, base2,*context = NULL; | ^~~~ Btk_get_mixed_bases.c: In function ‘Btk_get_mixed_bases’: Btk_get_mixed_bases.c:1365:31: warning: variable ‘res’ set but not used [-Wunused-but-set-variable] 1365 | double ratio, wratio, res, w1, w2; | ^~~ Btk_get_mixed_bases.c:1365:23: warning: variable ‘wratio’ set but not used [-Wunused-but-set-variable] 1365 | double ratio, wratio, res, w1, w2; | ^~~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_lookup_table.c -o ../../obj/Linux/Btk_lookup_table.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_qv_funs.c -o ../../obj/Linux/Btk_qv_funs.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c ABI_Toolkit.c -o ../../obj/Linux/ABI_Toolkit.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_default_table.c -o ../../obj/Linux/Btk_default_table.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c FileHandler.c -o ../../obj/Linux/FileHandler.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c SCF_Toolkit.c -o ../../obj/Linux/SCF_Toolkit.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c context_table.c -o ../../obj/Linux/context_table.o context_table.c: In function ‘weight_from_reverse_context’: context_table.c:1060:1: note: the layout of aggregates containing vectors with 4-byte alignment has changed in GCC 5 1060 | weight_from_reverse_context( const char base_code[], ContextTable *ctable ) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c tracepoly.c -o ../../obj/Linux/tracepoly.o tracepoly.c: In function ‘gaussj’: tracepoly.c:631:6: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 631 | if (ipiv[j] != 1) | ^~ tracepoly.c:641:3: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 641 | ++(ipiv[icol]); | ^~ tracepoly.c: In function ‘func_legendre_1based’: tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ tracepoly.c: In function ‘traceGetCoef.constprop’: tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:895:12: note: while referencing ‘xxxx’ 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~ tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:895:33: note: while referencing ‘yyyy’ 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~ tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:895:54: note: while referencing ‘sigma’ 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~~ tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:895:12: note: while referencing ‘xxxx’ 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~ tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:895:33: note: while referencing ‘yyyy’ 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~ tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:895:54: note: while referencing ‘sigma’ 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~~ tracepoly.c: In function ‘traceCalcCutoff’: tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ tracepoly.c:153:5: warning: array subscript -1 is outside array bounds of ‘double[2]’ [-Warray-bounds] 153 | func_legendre_1based( fa, x, pl-1, nl ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:830:12: note: while referencing ‘pp’ 830 | double pp[NumCoef], y; | ^~ tracepoly.c: In function ‘traceEvalPoly’: tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ tracepoly.c: In function ‘traceEvalFunc’: tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: while referencing ‘ptemp0’ 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ /usr/bin/ar rc ../../lib/Linux/libtt.a ../../obj/Linux/Btk_match_data.o ../../obj/Linux/Btk_compute_match.o ../../obj/Linux/Btk_sw.o ../../obj/Linux/Btk_process_indels.o ../../obj/Linux/Btk_atod.o ../../obj/Linux/Btk_compute_qv.o ../../obj/Linux/Btk_call_bases.o ../../obj/Linux/Btk_process_raw_data.o ../../obj/Linux/util.o ../../obj/Linux/nr.o ../../obj/Linux/Btk_process_peaks.o ../../obj/Linux/Btk_qv_io.o ../../obj/Linux/Btk_compute_tp.o ../../obj/Linux/Btk_compute_tpars.o ../../obj/Linux/Btk_get_mixed_bases.o ../../obj/Linux/Btk_lookup_table.o ../../obj/Linux/Btk_qv_funs.o ../../obj/Linux/ABI_Toolkit.o ../../obj/Linux/Btk_default_table.o ../../obj/Linux/FileHandler.o ../../obj/Linux/SCF_Toolkit.o ../../obj/Linux/context_table.o ../../obj/Linux/tracepoly.o /usr/bin/gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed ../../obj/Linux/main.o ../../lib/Linux/libtt.a -lm -o ../../rel/Linux/ttuner -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed make[2]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg/src/compute_qv' make[2]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mktrain' mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c train.c -o ../../obj/Linux/train.o In file included from /usr/include/string.h:519, from train.c:35: In function ‘strncpy’, inlined from ‘main’ at train.c:1431:26: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at train.c:1400:23: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at train.c:1357:27: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at train.c:1511:23: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at train.c:1501:23: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at train.c:1437:23: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at train.c:1297:23: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c train_data.c -o ../../obj/Linux/train_data.o train_data.c: In function ‘append_to_train_data’: train_data.c:217:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 217 | if (Verbose > 0) | ^~ train_data.c:220:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 220 | fprintf(fout, "# Clear range start :%4d end:%4d\n", | ^~~~~~~ /usr/bin/gcc -g -Wall -I../compute_qv -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed ../../obj/Linux/train.o ../../obj/Linux/train_data.o ../../obj/Linux/Btk_compute_match.o ../../obj/Linux/Btk_match_data.o ../../obj/Linux/Btk_sw.o ../../lib/Linux/libtt.a -lm -o ../../rel/Linux/train -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I. -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c trainphd.c -o ../../obj/Linux/trainphd.o trainphd.c: In function ‘process_projectfile’: trainphd.c:653:13: warning: variable ‘buffer2’ set but not used [-Wunused-but-set-variable] 653 | char buffer2[BUFLEN]; | ^~~~~~~ trainphd.c: In function ‘main’: trainphd.c:931:35: error: format not a string literal and no format arguments [-Werror=format-security] 931 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:940:35: error: format not a string literal and no format arguments [-Werror=format-security] 940 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:959:39: error: format not a string literal and no format arguments [-Werror=format-security] 959 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:967:39: error: format not a string literal and no format arguments [-Werror=format-security] 967 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1011:33: error: format not a string literal and no format arguments [-Werror=format-security] 1011 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1018:33: error: format not a string literal and no format arguments [-Werror=format-security] 1018 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1084:33: error: format not a string literal and no format arguments [-Werror=format-security] 1084 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1091:33: error: format not a string literal and no format arguments [-Werror=format-security] 1091 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1123:35: error: format not a string literal and no format arguments [-Werror=format-security] 1123 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1128:35: error: format not a string literal and no format arguments [-Werror=format-security] 1128 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1134:33: error: format not a string literal and no format arguments [-Werror=format-security] 1134 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1139:33: error: format not a string literal and no format arguments [-Werror=format-security] 1139 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ In file included from /usr/include/string.h:519, from trainphd.c:38: In function ‘strncpy’, inlined from ‘process_dir’ at trainphd.c:608:17, inlined from ‘main’ at trainphd.c:1095:17: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin___strncpy_chk’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ trainphd.c: In function ‘main’: trainphd.c:608:40: note: length computed here 608 | strncpy(path2, string, strlen(string)-strlen(name)); // remove the phd.1 suffix | ^~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from trainphd.c:38: In function ‘strncpy’, inlined from ‘process_projectfile’ at trainphd.c:735:17, inlined from ‘main’ at trainphd.c:1105:13: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin___strncpy_chk’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ trainphd.c: In function ‘main’: trainphd.c:735:46: note: length computed here 735 | strncpy(tabFileName, string, strlen(string)-strlen(name)); // remove the phd.1 suffix | ^~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from trainphd.c:38: In function ‘strncpy’, inlined from ‘main’ at trainphd.c:1041:25: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin___strncpy_chk’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ trainphd.c: In function ‘main’: trainphd.c:1041:56: note: length computed here 1041 | strncpy(tab_file_name, string, strlen(string)-strlen(name)); | ^~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from trainphd.c:38: In function ‘strncpy’, inlined from ‘main’ at trainphd.c:896:19: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at trainphd.c:856:19: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at trainphd.c:864:19: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at trainphd.c:860:19: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at trainphd.c:818:19: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at trainphd.c:822:19: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at trainphd.c:814:19: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘main’ at trainphd.c:849:19: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cc1: some warnings being treated as errors make[2]: *** [../include.mk:180: ../../obj/Linux/trainphd.o] Error 1 make[2]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mktrain' make[2]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mklut' mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I../mktrain -I. -I/home/gdenisov/build/include/io_lib -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -I../mkchk -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c lut.c -o ../../obj/Linux/lut.o lut.c: In function ‘read_bases_and_populate_bins’: lut.c:438:26: warning: variable ‘cchar’ set but not used [-Wunused-but-set-variable] 438 | char schar, cchar; /* Sample and consensus characters. */ | ^~~~~ lut.c:437:25: warning: variable ‘cpos’ set but not used [-Wunused-but-set-variable] 437 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ lut.c:437:19: warning: variable ‘spos’ set but not used [-Wunused-but-set-variable] 437 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ lut.c: In function ‘create_qv_table_via_dynamic_programming’: lut.c:894:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 894 | for (i = 1; i < (MAX_QV / 10); i++) | ^~~ lut.c:899:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 899 | fprintf(fout, "\n"); | ^~~~~~~ lut.c: In function ‘compress_params_array’: lut.c:1012:13: warning: variable ‘max_weight’ set but not used [-Wunused-but-set-variable] 1012 | int max_weight=0, *wn; | ^~~~~~~~~~ lut.c: In function ‘read_and_sort_trace_parameters’: lut.c:1112:21: warning: variable ‘cchar’ set but not used [-Wunused-but-set-variable] 1112 | char schar, cchar; /* Sample and consensus characters. */ | ^~~~~ lut.c:1111:20: warning: variable ‘cpos’ set but not used [-Wunused-but-set-variable] 1111 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ lut.c:1111:14: warning: variable ‘spos’ set but not used [-Wunused-but-set-variable] 1111 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ lut.c: In function ‘main’: lut.c:1404:15: warning: passing argument 1 of ‘time’ makes pointer from integer without a cast [-Wint-conversion] 1404 | t1 = time((time_t) NULL); | ^ | | | long int In file included from lut.c:45: /usr/include/time.h:75:29: note: expected ‘time_t *’ {aka ‘long int *’} but argument is of type ‘long int’ 75 | extern time_t time (time_t *__timer) __THROW; | ~~~~~~~~^~~~~~~ lut.c:1449:34: warning: format ‘%d’ expects argument of type ‘int *’, but argument 3 has type ‘unsigned int *’ [-Wformat=] 1449 | sscanf(optarg, "%d", &threshold_count); | ~^ ~~~~~~~~~~~~~~~~ | | | | | unsigned int * | int * | %d lut.c:1520:15: warning: passing argument 1 of ‘time’ makes pointer from integer without a cast [-Wint-conversion] 1520 | t2 = time((time_t) NULL); | ^ | | | long int In file included from lut.c:45: /usr/include/time.h:75:29: note: expected ‘time_t *’ {aka ‘long int *’} but argument is of type ‘long int’ 75 | extern time_t time (time_t *__timer) __THROW; | ~~~~~~~~^~~~~~~ lut.c:1573:15: warning: passing argument 1 of ‘time’ makes pointer from integer without a cast [-Wint-conversion] 1573 | t2 = time((time_t) NULL); | ^ | | | long int In file included from lut.c:45: /usr/include/time.h:75:29: note: expected ‘time_t *’ {aka ‘long int *’} but argument is of type ‘long int’ 75 | extern time_t time (time_t *__timer) __THROW; | ~~~~~~~~^~~~~~~ lut.c:1604:15: warning: passing argument 1 of ‘time’ makes pointer from integer without a cast [-Wint-conversion] 1604 | t2 = time((time_t) NULL); | ^ | | | long int In file included from lut.c:45: /usr/include/time.h:75:29: note: expected ‘time_t *’ {aka ‘long int *’} but argument is of type ‘long int’ 75 | extern time_t time (time_t *__timer) __THROW; | ~~~~~~~~^~~~~~~ lut.c:1645:15: warning: passing argument 1 of ‘time’ makes pointer from integer without a cast [-Wint-conversion] 1645 | t2 = time((time_t) NULL); | ^ | | | long int In file included from lut.c:45: /usr/include/time.h:75:29: note: expected ‘time_t *’ {aka ‘long int *’} but argument is of type ‘long int’ 75 | extern time_t time (time_t *__timer) __THROW; | ~~~~~~~~^~~~~~~ In file included from /usr/include/string.h:519, from lut.c:46: In function ‘strncpy’, inlined from ‘main’ at lut.c:1459:23: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I../mktrain -I. -I/home/gdenisov/build/include/io_lib -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -I../mkchk -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c select.c -o ../../obj/Linux/select.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I../mktrain -I. -I/home/gdenisov/build/include/io_lib -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -I../mkchk -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c func_name.c -o ../../obj/Linux/func_name.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I../mktrain -I. -I/home/gdenisov/build/include/io_lib -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -I../mkchk -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c get_thresholds.c -o ../../obj/Linux/get_thresholds.o mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I../mktrain -I. -I/home/gdenisov/build/include/io_lib -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -I../mkchk -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c ../mkchk/check_data.c -o ../../obj/Linux/check_data.o ../mkchk/check_data.c: In function ‘get_bases’: ../mkchk/check_data.c:47:25: warning: variable ‘cpos’ set but not used [-Wunused-but-set-variable] 47 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ ../mkchk/check_data.c:47:19: warning: variable ‘spos’ set but not used [-Wunused-but-set-variable] 47 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ g++ ../../obj/Linux/lut.o ../../obj/Linux/select.o ../../obj/Linux/func_name.o ../../obj/Linux/get_thresholds.o ../../obj/Linux/check_data.o -o ../../rel/Linux/lut -lm -lz ../../lib/Linux/libtt.a -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed make[2]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mklut' make[2]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mkchk' mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I../mktrain -I../mklut -I. -I -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c checkbc.c -o ../../obj/Linux/checkbc.o g++ ../../obj/Linux/checkbc.o ../../obj/Linux/check_data.o ../../lib/Linux/libtt.a -lm -lz -o ../../rel/Linux/checkbc -lm -lz ../../lib/Linux/libtt.a -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I../mktrain -I../mklut -I. -I -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c checkqv.c -o ../../obj/Linux/checkqv.o checkqv.c: In function ‘crossValidate’: checkqv.c:84:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 84 | if (base[i].schar != '-') | ^~ checkqv.c:87:6: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 87 | qv = get_quality_value(base[i].parameter[0], | ^~ g++ ../../obj/Linux/checkqv.o ../../obj/Linux/check_data.o ../../lib/Linux/libtt.a -lm -lz -o ../../rel/Linux/checkqv -lm -lz ../../lib/Linux/libtt.a -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I../mktrain -I../mklut -I. -I -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c checkbcphd.c -o ../../obj/Linux/checkbcphd.o checkbcphd.c: In function ‘errorStatswithQVs’: checkbcphd.c:197:18: warning: unknown escape sequence: '\%' 197 | char c = '\%'; | ^~~~ checkbcphd.c:50:51: warning: variable ‘qvo’ set but not used [-Wunused-but-set-variable] 50 | Nqvp[MAXNUMBINS+1], qvp[MAXNUMBINS+1], qvo[MAXNUMBINS+1]; | ^~~ checkbcphd.c:50:32: warning: variable ‘qvp’ set but not used [-Wunused-but-set-variable] 50 | Nqvp[MAXNUMBINS+1], qvp[MAXNUMBINS+1], qvo[MAXNUMBINS+1]; | ^~~ g++ ../../obj/Linux/checkbcphd.o ../../obj/Linux/check_data.o ../../lib/Linux/libtt.a -lm -lz -o ../../rel/Linux/checkbcphd -lm -lz ../../lib/Linux/libtt.a -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed mkdir -p ../../obj/Linux /usr/bin/gcc -g -Wall -I../compute_qv -I../mktrain -I../mklut -I. -I -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -g -O3 -fdebug-prefix-map=/<>/tracetuner-3.0.6~beta+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c checkqvphd.c -o ../../obj/Linux/checkqvphd.o g++ ../../obj/Linux/checkqvphd.o ../../obj/Linux/check_data.o ../../lib/Linux/libtt.a -lm -lz -o ../../rel/Linux/checkqvphd -lm -lz ../../lib/Linux/libtt.a -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed make[2]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg/src/mkchk' make[1]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg/src' dh_auto_test -a -O--sourcedirectory=src -O--no-parallel rm -fr -- /tmp/dh-xdg-rundir-UN3fZfN1 create-stamp debian/debhelper-build-stamp dh_testroot -a -O--sourcedirectory=src -O--no-parallel dh_prep -a -O--sourcedirectory=src -O--no-parallel rm -f -- debian/tracetuner.substvars rm -fr -- debian/.debhelper/generated/tracetuner/ debian/tracetuner/ debian/tmp/ dh_installdirs -a -O--sourcedirectory=src -O--no-parallel install -d debian/tracetuner/usr/bin debian/rules override_dh_auto_install make[1]: Entering directory '/<>/tracetuner-3.0.6~beta+dfsg' dh_auto_install find rel -mindepth 2 -type f | xargs -r mv --target-directory=/<>/tracetuner-3.0.6~beta+dfsg/debian/tracetuner/usr/bin/ make[1]: Leaving directory '/<>/tracetuner-3.0.6~beta+dfsg' dh_installdocs -a -O--sourcedirectory=src -O--no-parallel install -d debian/tracetuner/usr/share/doc/tracetuner install -d debian/.debhelper/generated/tracetuner cp --reflink=auto -a ./src/README debian/tracetuner/usr/share/doc/tracetuner cp --reflink=auto -a ./doc/RELEASE_NOTES debian/tracetuner/usr/share/doc/tracetuner chmod -R u\+rw,go=rX debian/tracetuner/usr/share/doc install -p -m0644 debian/README.Debian debian/tracetuner/usr/share/doc/tracetuner/README.Debian install -p -m0644 debian/copyright debian/tracetuner/usr/share/doc/tracetuner/copyright dh_installchangelogs -a -O--sourcedirectory=src -O--no-parallel install -p -m0644 debian/changelog debian/tracetuner/usr/share/doc/tracetuner/changelog.Debian dh_installman -a -O--sourcedirectory=src -O--no-parallel install -d debian/tracetuner/usr/share/man/man1/ install -p -m0644 ./debian/mans/train.1 debian/tracetuner/usr/share/man/man1/train.1 install -p -m0644 ./debian/mans/trainphd.1 debian/tracetuner/usr/share/man/man1/trainphd.1 install -p -m0644 ./debian/mans/ttuner.1 debian/tracetuner/usr/share/man/man1/ttuner.1 man-recode --to-code UTF-8 --suffix .dh-new debian/tracetuner/usr/share/man/man1/train.1 man-recode --to-code UTF-8 --suffix .dh-new debian/tracetuner/usr/share/man/man1/trainphd.1 man-recode --to-code UTF-8 --suffix .dh-new debian/tracetuner/usr/share/man/man1/ttuner.1 mv debian/tracetuner/usr/share/man/man1/trainphd.1.dh-new debian/tracetuner/usr/share/man/man1/trainphd.1 chmod 0644 -- debian/tracetuner/usr/share/man/man1/trainphd.1 mv debian/tracetuner/usr/share/man/man1/train.1.dh-new debian/tracetuner/usr/share/man/man1/train.1 chmod 0644 -- debian/tracetuner/usr/share/man/man1/train.1 mv debian/tracetuner/usr/share/man/man1/ttuner.1.dh-new debian/tracetuner/usr/share/man/man1/ttuner.1 chmod 0644 -- debian/tracetuner/usr/share/man/man1/ttuner.1 dh_installsystemduser -a -O--sourcedirectory=src -O--no-parallel dh_perl -a -O--sourcedirectory=src -O--no-parallel dh_link -a -O--sourcedirectory=src -O--no-parallel dh_strip_nondeterminism -a -O--sourcedirectory=src -O--no-parallel dh_compress -a -O--sourcedirectory=src -O--no-parallel cd debian/tracetuner chmod a-x usr/share/doc/tracetuner/README usr/share/doc/tracetuner/RELEASE_NOTES usr/share/doc/tracetuner/changelog.Debian usr/share/man/man1/train.1 usr/share/man/man1/trainphd.1 usr/share/man/man1/ttuner.1 gzip -9nf usr/share/doc/tracetuner/README usr/share/doc/tracetuner/RELEASE_NOTES usr/share/doc/tracetuner/changelog.Debian usr/share/man/man1/train.1 usr/share/man/man1/trainphd.1 usr/share/man/man1/ttuner.1 cd '/<>/tracetuner-3.0.6~beta+dfsg' dh_fixperms -a -O--sourcedirectory=src -O--no-parallel find debian/tracetuner ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/tracetuner/usr/share/doc -type f -a -true -a ! -regex 'debian/tracetuner/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tracetuner/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/tracetuner/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tracetuner -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tracetuner/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a -O--sourcedirectory=src -O--no-parallel dh_dwz -a -a -O--sourcedirectory=src -O--no-parallel install -d debian/tracetuner/usr/lib/debug/.dwz/powerpc64le-linux-gnu dwz -mdebian/tracetuner/usr/lib/debug/.dwz/powerpc64le-linux-gnu/tracetuner.debug -M/usr/lib/debug/.dwz/powerpc64le-linux-gnu/tracetuner.debug -- debian/tracetuner/usr/bin/checkbc debian/tracetuner/usr/bin/checkbcphd debian/tracetuner/usr/bin/checkqv debian/tracetuner/usr/bin/checkqvphd debian/tracetuner/usr/bin/lut debian/tracetuner/usr/bin/train debian/tracetuner/usr/bin/ttuner objcopy --compress-debug-sections debian/tracetuner/usr/lib/debug/.dwz/powerpc64le-linux-gnu/tracetuner.debug dh_strip -a -a -O--sourcedirectory=src -O--no-parallel install -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/c8 objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/ttuner debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/c8/15849c7d01a02dfb998f02db225f35bc7dbf0e.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/c8/15849c7d01a02dfb998f02db225f35bc7dbf0e.debug strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/ttuner objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/c8/15849c7d01a02dfb998f02db225f35bc7dbf0e.debug debian/tracetuner/usr/bin/ttuner install -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/be objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/checkqvphd debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/be/c5e7c1b14ed70f5c50c9cab8a8b867fcaa3cbb.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/be/c5e7c1b14ed70f5c50c9cab8a8b867fcaa3cbb.debug strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/checkqvphd objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/be/c5e7c1b14ed70f5c50c9cab8a8b867fcaa3cbb.debug debian/tracetuner/usr/bin/checkqvphd install -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/8e objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/train debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/8e/3dba133df38ed747eede978e2de34b1d686ed7.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/8e/3dba133df38ed747eede978e2de34b1d686ed7.debug strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/train objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/8e/3dba133df38ed747eede978e2de34b1d686ed7.debug debian/tracetuner/usr/bin/train install -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/42 objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/checkqv debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/42/d4e7fe2ae96332c5179ff5289adb2c01d759cc.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/42/d4e7fe2ae96332c5179ff5289adb2c01d759cc.debug strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/checkqv objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/42/d4e7fe2ae96332c5179ff5289adb2c01d759cc.debug debian/tracetuner/usr/bin/checkqv install -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/70 objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/checkbcphd debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/70/123abb2d6f22031eeb0af190c4e357439f0fdd.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/70/123abb2d6f22031eeb0af190c4e357439f0fdd.debug strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/checkbcphd objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/70/123abb2d6f22031eeb0af190c4e357439f0fdd.debug debian/tracetuner/usr/bin/checkbcphd install -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/24 objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/lut debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/24/ef76080bc5120d5ae3623a7e1229b673148ecb.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/24/ef76080bc5120d5ae3623a7e1229b673148ecb.debug strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/lut objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/24/ef76080bc5120d5ae3623a7e1229b673148ecb.debug debian/tracetuner/usr/bin/lut install -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/c4 objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/checkbc debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/c4/19a9ee6b3566a4732a6eaf9b1a41d6a3e5c466.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/c4/19a9ee6b3566a4732a6eaf9b1a41d6a3e5c466.debug strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/checkbc objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/c4/19a9ee6b3566a4732a6eaf9b1a41d6a3e5c466.debug debian/tracetuner/usr/bin/checkbc install -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/tracetuner/usr/lib/debug/.dwz/powerpc64le-linux-gnu debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/tracetuner/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/tracetuner/usr/lib/debug install -d debian/.debhelper/tracetuner/dbgsym-root/usr/share/doc ln -s tracetuner debian/.debhelper/tracetuner/dbgsym-root/usr/share/doc/tracetuner-dbgsym dh_makeshlibs -a -a -O--sourcedirectory=src -O--no-parallel rm -f debian/tracetuner/DEBIAN/shlibs dh_shlibdeps -a -a -O--sourcedirectory=src -O--no-parallel install -d debian/tracetuner/DEBIAN dpkg-shlibdeps -Tdebian/tracetuner.substvars debian/tracetuner/usr/bin/ttuner debian/tracetuner/usr/bin/checkqvphd debian/tracetuner/usr/bin/train debian/tracetuner/usr/bin/checkqv debian/tracetuner/usr/bin/checkbcphd debian/tracetuner/usr/bin/lut debian/tracetuner/usr/bin/checkbc dh_installdeb -a -O--sourcedirectory=src -O--no-parallel dh_gencontrol -a -O--sourcedirectory=src -O--no-parallel echo misc:Depends= >> debian/tracetuner.substvars echo misc:Pre-Depends= >> debian/tracetuner.substvars install -d debian/.debhelper/tracetuner/dbgsym-root/DEBIAN dpkg-gencontrol -ptracetuner -ldebian/changelog -Tdebian/tracetuner.substvars -Pdebian/.debhelper/tracetuner/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=tracetuner-dbgsym "-DDepends=tracetuner (= \${binary:Version})" "-DDescription=debug symbols for tracetuner" "-DBuild-Ids=24ef76080bc5120d5ae3623a7e1229b673148ecb 42d4e7fe2ae96332c5179ff5289adb2c01d759cc 70123abb2d6f22031eeb0af190c4e357439f0fdd 8e3dba133df38ed747eede978e2de34b1d686ed7 bec5e7c1b14ed70f5c50c9cab8a8b867fcaa3cbb c419a9ee6b3566a4732a6eaf9b1a41d6a3e5c466 c815849c7d01a02dfb998f02db225f35bc7dbf0e" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptracetuner -ldebian/changelog -Tdebian/tracetuner.substvars -Pdebian/tracetuner chmod 0644 -- debian/tracetuner/DEBIAN/control dh_md5sums -a -O--sourcedirectory=src -O--no-parallel cd debian/tracetuner >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/tracetuner/DEBIAN/md5sums cd debian/.debhelper/tracetuner/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/DEBIAN/md5sums dh_builddeb -a -O--sourcedirectory=src -O--no-parallel dpkg-deb --root-owner-group --build debian/tracetuner .. install -d debian/.debhelper/scratch-space/build-tracetuner dpkg-deb --root-owner-group --build debian/.debhelper/tracetuner/dbgsym-root debian/.debhelper/scratch-space/build-tracetuner INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing tracetuner (in debian/tracetuner); do_strip: , oemstrip: pkgstriptranslations: processing tracetuner-dbgsym (in debian/.debhelper/tracetuner/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/tracetuner/DEBIAN/control, package tracetuner, directory debian/tracetuner pkgstripfiles: Running PNG optimization (using 4 cpus) for package tracetuner ... pkgstripfiles: No PNG files. dpkg-deb: building package 'tracetuner' in '../tracetuner_3.0.6~beta+dfsg-3_ppc64el.deb'. pkgstripfiles: processing control file: debian/.debhelper/tracetuner/dbgsym-root/DEBIAN/control, package tracetuner-dbgsym, directory debian/.debhelper/tracetuner/dbgsym-root dpkg-deb: building package 'tracetuner-dbgsym' in 'debian/.debhelper/scratch-space/build-tracetuner/tracetuner-dbgsym_3.0.6~beta+dfsg-3_ppc64el.deb'. Renaming tracetuner-dbgsym_3.0.6~beta+dfsg-3_ppc64el.deb to tracetuner-dbgsym_3.0.6~beta+dfsg-3_ppc64el.ddeb mv debian/.debhelper/scratch-space/build-tracetuner/tracetuner-dbgsym_3.0.6\~beta\+dfsg-3_ppc64el.deb ../tracetuner-dbgsym_3.0.6\~beta\+dfsg-3_ppc64el.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../tracetuner_3.0.6~beta+dfsg-3_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-12-05T05:20:05Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ tracetuner_3.0.6~beta+dfsg-3_ppc64el.changes: --------------------------------------------- Format: 1.8 Date: Fri, 04 Dec 2020 23:43:55 +0100 Source: tracetuner Binary: tracetuner Architecture: ppc64el Version: 3.0.6~beta+dfsg-3 Distribution: hirsute-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: tracetuner - interpretation of DNA Sanger sequencing data Changes: tracetuner (3.0.6~beta+dfsg-3) unstable; urgency=medium . * Team upload. * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Remove trailing whitespace in debian/control (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) Checksums-Sha1: 98539fcf34fb5eb87a812e15b4107a6767a8884e 1335964 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Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: tracetuner Binary: tracetuner tracetuner-dbgsym Architecture: ppc64el Version: 3.0.6~beta+dfsg-3 Checksums-Md5: a6895d6e204916effd33a8cc3ebab2aa 1335964 tracetuner-dbgsym_3.0.6~beta+dfsg-3_ppc64el.ddeb bf46747e540196912f29faf5e64bc34a 390380 tracetuner_3.0.6~beta+dfsg-3_ppc64el.deb Checksums-Sha1: 98539fcf34fb5eb87a812e15b4107a6767a8884e 1335964 tracetuner-dbgsym_3.0.6~beta+dfsg-3_ppc64el.ddeb 30e00e1dd14c35a91c7ac9405a5a019ab2285094 390380 tracetuner_3.0.6~beta+dfsg-3_ppc64el.deb Checksums-Sha256: 61ac78d32c40e8c1077289001295fabfca52932c7901be95a0a1b171cbd90171 1335964 tracetuner-dbgsym_3.0.6~beta+dfsg-3_ppc64el.ddeb 221c56901925e457b2f6e1f9116b408af2962014ad27bbfca67dbe37216127c4 390380 tracetuner_3.0.6~beta+dfsg-3_ppc64el.deb Build-Origin: Ubuntu Build-Architecture: ppc64el Build-Date: Sat, 05 Dec 2020 05:20:05 +0000 Build-Path: /<>/tracetuner-3.0.6~beta+dfsg Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.3-1ubuntu1), autopoint (= 0.19.8.1-10build1), autotools-dev (= 20180224.1), base-files (= 11ubuntu16), base-passwd (= 3.5.48), bash (= 5.1~rc3-1ubuntu1), binutils (= 2.35.1-3ubuntu1), binutils-common (= 2.35.1-3ubuntu1), binutils-powerpc64le-linux-gnu (= 2.35.1-3ubuntu1), bsdextrautils (= 2.36.1-1ubuntu2), bsdutils (= 1:2.36.1-1ubuntu2), build-essential (= 12.8ubuntu3), bzip2 (= 1.0.8-4ubuntu2), coreutils (= 8.32-4ubuntu1), cpp (= 4:10.2.0-1ubuntu1), cpp-10 (= 10.2.0-20ubuntu1), dash (= 0.5.11+git20200708+dd9ef66+really0.5.10.2-0ubuntu1), debconf (= 1.5.74), debhelper (= 13.2.1ubuntu1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3ubuntu1), dpkg (= 1.20.5ubuntu3), dpkg-dev (= 1.20.5ubuntu3), dwz (= 0.13-5), file (= 1:5.39-3), findutils (= 4.7.0-1ubuntu2), g++ (= 4:10.2.0-1ubuntu1), g++-10 (= 10.2.0-20ubuntu1), gcc (= 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1.3.0-0ubuntu3), libnsl2 (= 1.3.0-0ubuntu3), libpam-modules (= 1.3.1-5ubuntu6), libpam-modules-bin (= 1.3.1-5ubuntu6), libpam-runtime (= 1.3.1-5ubuntu6), libpam0g (= 1.3.1-5ubuntu6), libpcre2-8-0 (= 10.35-2), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.0-5), libpipeline1 (= 1.5.3-1), libquadmath0 (= 10.2.0-20ubuntu1), libseccomp2 (= 2.4.3-1ubuntu5), libselinux1 (= 3.1-2build1), libsigsegv2 (= 2.12-2build1), libsmartcols1 (= 2.36.1-1ubuntu2), libssl1.1 (= 1.1.1f-1ubuntu4), libstdc++-10-dev (= 10.2.0-20ubuntu1), libstdc++6 (= 10.2.0-20ubuntu1), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.6-5ubuntu1), libtinfo6 (= 6.2+20201114-1), libtirpc-common (= 1.2.6-3), libtirpc-dev (= 1.2.6-3), libtirpc3 (= 1.2.6-3), libtool (= 2.4.6-14), libtsan0 (= 10.2.0-20ubuntu1), libubsan1 (= 10.2.0-20ubuntu1), libuchardet0 (= 0.0.7-1), libudev1 (= 246.6-5ubuntu1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36.1-1ubuntu2), libxml2 (= 2.9.10+dfsg-6.3), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 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package, version 2.0. size 390380 bytes: control archive=2012 bytes. 2557 bytes, 51 lines control 911 bytes, 15 lines md5sums Package: tracetuner Version: 3.0.6~beta+dfsg-3 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 2270 Depends: libc6 (>= 2.29) Section: science Priority: optional Homepage: https://sourceforge.net/projects/tracetuner/ Description: interpretation of DNA Sanger sequencing data Tracetuner is a tool for base and quality calling of trace files from DNA sequencing instruments. Traditional DNA sequencing yields curves from four different channels or light frequencies that human or (preferably) machines are interpreting to determine the actual base (A,C,G or T) and the confidence with which this is determined. . TraceTuner is a DNA sequencing quality value, base calling and trace processing software application originally developed by Paracel, Inc. While providing a flexible interface and capability to adopt the "pure" base calls produced by Phred, KB or any other "original" caller, it offers competitive features not currently available in other tools, such as customized calibration of quality values, advanced heterozygote and mixed base calling and deconvolving the "mixed" electropherograms resulting from the presence of indels into a couple of "pure" electropherograms. . Later versions Previous versions of TraceTuner were used by Celera Genomics to process over 27 million reads from both Drosophila and human genome projects. In 2000, Applied Biosystems bundled TraceTuner with ABI3700 Genome Analyzers and shipped it to the customers of these capillary electrophoresis sequencers. its SNP detection and genotyping software product SeqScape. . TraceTuner implements an advanced peak processing technology for resolving overlapping peaks of the same dye color into individual, or "intrinsic" peaks. TraceTuner, for its support of mixed base calling, have been used by the research community, the private biotech sector, and the U.S. government as components of different variant detection, genotyping and forensic software applications (e.g. Applied Biosystems SeqScape, Paracel Genome Assembler, MTexpert, etc.). . This technology was protected by US Patent #6,681,186. Currently, TraceTuner is an open source software, which has been used by J. Craig Venter Institute's DNA Sequencing and Resequencing pipelines. . This package prepares an important piece of human history to be used with new data on new machines or to revisit older observations.. drwxr-xr-x root/root 0 2020-12-04 22:43 ./ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/bin/ -rwxr-xr-x root/root 67848 2020-12-04 22:43 ./usr/bin/checkbc -rwxr-xr-x root/root 67848 2020-12-04 22:43 ./usr/bin/checkbcphd -rwxr-xr-x root/root 675392 2020-12-04 22:43 ./usr/bin/checkqv -rwxr-xr-x root/root 67848 2020-12-04 22:43 ./usr/bin/checkqvphd -rwxr-xr-x root/root 67848 2020-12-04 22:43 ./usr/bin/lut -rwxr-xr-x root/root 675384 2020-12-04 22:43 ./usr/bin/train -rwxr-xr-x root/root 675400 2020-12-04 22:43 ./usr/bin/ttuner drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/doc/tracetuner/ -rw-r--r-- root/root 497 2020-12-04 22:43 ./usr/share/doc/tracetuner/README.Debian -rw-r--r-- root/root 1671 2008-11-28 23:00 ./usr/share/doc/tracetuner/README.gz -rw-r--r-- root/root 1625 2009-06-30 13:16 ./usr/share/doc/tracetuner/RELEASE_NOTES.gz -rw-r--r-- root/root 413 2020-12-04 22:43 ./usr/share/doc/tracetuner/changelog.Debian.gz -rw-r--r-- root/root 1157 2020-12-04 22:43 ./usr/share/doc/tracetuner/copyright drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/man/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/man/man1/ -rw-r--r-- root/root 1059 2020-12-04 22:43 ./usr/share/man/man1/train.1.gz -rw-r--r-- root/root 961 2020-12-04 22:43 ./usr/share/man/man1/trainphd.1.gz -rw-r--r-- root/root 1341 2020-12-04 22:43 ./usr/share/man/man1/ttuner.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: ppc64el Build Type: any Build-Space: n/a Build-Time: 29 Distribution: hirsute-proposed Host Architecture: ppc64el Install-Time: 11 Job: tracetuner_3.0.6~beta+dfsg-3.dsc Machine Architecture: ppc64el Package: tracetuner Package-Time: 42 Source-Version: 3.0.6~beta+dfsg-3 Space: n/a Status: successful Version: 3.0.6~beta+dfsg-3 -------------------------------------------------------------------------------- Finished at 2020-12-05T05:20:05Z Build needed 00:00:42, no disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=hirsute --arch=ppc64el PACKAGEBUILD-20367198 Scanning for processes to kill in build PACKAGEBUILD-20367198