trnascan-se 2.0.0-3.1~build1 source package in Ubuntu

Changelog

trnascan-se (2.0.0-3.1~build1) disco; urgency=low

  * Merge from Debian unstable.  Remaining changes:
    - Add infernal to B-D.
    - this change is committed in debian git repo, so make the package
      automatically syncable

 -- Gianfranco Costamagna <email address hidden>  Thu, 29 Nov 2018 12:07:57 +0100

Upload details

Uploaded by:
Gianfranco Costamagna on 2018-11-29
Uploaded to:
Disco
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Low Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Eoan release on 2019-04-18 multiverse misc
Disco release on 2018-11-29 multiverse misc

Downloads

File Size SHA-256 Checksum
trnascan-se_2.0.0.orig.tar.gz 4.2 MiB 0dde1c07142e4bf77b21d53ddf3eeb1ef8c52248005a42323d13f8d7c798100c
trnascan-se_2.0.0-3.1~build1.debian.tar.xz 6.5 KiB 0dc2b4fcdfe3602f3fe5b477b1f7dc5394d7656597d86c69f3bb5fe021ca2253
trnascan-se_2.0.0-3.1~build1.dsc 2.1 KiB a3fea42a039a4cf8c6a2d0436adf8ecee431a44e8569e4ca7e6a3980bbb9ebbb

View changes file

Binary packages built by this source

trnascan-se: detection of transfer RNA genes in genomic sequence

 tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while
 giving less than one false positive per 15 gigabases. Two previously described
 tRNA detection programs are used as fast, first-pass prefilters to identify
 candidate tRNAs, which are then analyzed by a highly selective tRNA covariance
 model. This work represents a practical application of RNA covariance models,
 which are general, probabilistic secondary structure profiles based on
 stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s.
 Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as
 selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.

trnascan-se-common: detection of transfer RNA genes in genomic sequence (common files)

 tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while
 giving less than one false positive per 15 gigabases. Two previously described
 tRNA detection programs are used as fast, first-pass prefilters to identify
 candidate tRNAs, which are then analyzed by a highly selective tRNA covariance
 model. This work represents a practical application of RNA covariance models,
 which are general, probabilistic secondary structure profiles based on
 stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s.
 Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as
 selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.
 .
 This package contains the architecture-independent common files.

trnascan-se-dbgsym: debug symbols for trnascan-se