https://launchpad.net/ubuntu/+source/twopaco/1.0.0+dfsg-1/+build/24626254 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lcy02-amd64-060 5.4.0-131-generic #147-Ubuntu SMP Fri Oct 14 17:07:22 UTC 2022 x86_64 Buildd toolchain package versions: launchpad-buildd_223~593~ubuntu20.04.1 python3-lpbuildd_223~593~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.6 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1. Syncing the system clock with the buildd NTP service... 6 Nov 07:37:58 ntpdate[1765]: adjust time server 10.131.248.1 offset 0.001273 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=lunar --arch=amd64 PACKAGEBUILD-24626254 --image-type chroot /home/buildd/filecache-default/93056656ffca866e6c2a454f453b424a388b800f Creating target for build PACKAGEBUILD-24626254 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=lunar --arch=amd64 PACKAGEBUILD-24626254 Starting target for build PACKAGEBUILD-24626254 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=lunar --arch=amd64 PACKAGEBUILD-24626254 'deb http://ftpmaster.internal/ubuntu lunar main universe' 'deb http://ftpmaster.internal/ubuntu lunar-security main universe' 'deb http://ftpmaster.internal/ubuntu lunar-updates main universe' 'deb http://ftpmaster.internal/ubuntu lunar-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-24626254 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=lunar --arch=amd64 PACKAGEBUILD-24626254 Updating target for build PACKAGEBUILD-24626254 Get:1 http://ftpmaster.internal/ubuntu lunar InRelease [224 kB] Get:2 http://ftpmaster.internal/ubuntu lunar-security InRelease [74.9 kB] Get:3 http://ftpmaster.internal/ubuntu lunar-updates InRelease [74.9 kB] Get:4 http://ftpmaster.internal/ubuntu lunar-proposed InRelease [74.9 kB] Get:5 http://ftpmaster.internal/ubuntu lunar/main amd64 Packages [1390 kB] Get:6 http://ftpmaster.internal/ubuntu lunar/main Translation-en [510 kB] Get:7 http://ftpmaster.internal/ubuntu lunar/universe amd64 Packages [14.5 MB] Get:8 http://ftpmaster.internal/ubuntu lunar/universe Translation-en [5791 kB] Get:9 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 Packages [372 kB] Get:10 http://ftpmaster.internal/ubuntu lunar-proposed/main Translation-en [141 kB] Get:11 http://ftpmaster.internal/ubuntu lunar-proposed/universe amd64 Packages [2121 kB] Get:12 http://ftpmaster.internal/ubuntu lunar-proposed/universe Translation-en [943 kB] Fetched 26.2 MB in 2s (11.0 MB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libperl5.34 perl-modules-5.34 sgml-base Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libperl5.36 perl-modules-5.36 The following packages will be upgraded: apt base-files base-passwd bash binutils binutils-common binutils-x86-64-linux-gnu cpp-12 debianutils fakeroot g++-12 gcc-12 gcc-12-base gpg gpg-agent gpgconf gpgv grep init init-system-helpers libapparmor1 libapt-pkg6.0 libasan8 libassuan0 libatomic1 libaudit-common libaudit1 libbinutils libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcc1-0 libcrypt-dev libcrypt1 libctf-nobfd0 libctf0 libfakeroot libffi8 libgcc-12-dev libgcc-s1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libgprofng0 libidn2-0 libitm1 libjson-c5 liblsan0 liblz4-1 liblzma5 libp11-kit0 libpng16-16 libquadmath0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsqlite3-0 libstdc++-12-dev libstdc++6 libsystemd-shared libsystemd0 libtasn1-6 libtsan2 libubsan1 libudev1 libunistring2 linux-libc-dev lto-disabled-list perl perl-base readline-common sgml-base systemd systemd-sysv tzdata usrmerge xz-utils zlib1g 84 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 92.2 MB of archives. After this operation, 47.4 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libcrypt-dev amd64 1:4.4.30-1 [112 kB] Get:2 http://ftpmaster.internal/ubuntu lunar/main amd64 libc6-dev amd64 2.36-0ubuntu4 [2088 kB] Get:3 http://ftpmaster.internal/ubuntu lunar/main amd64 libc-dev-bin amd64 2.36-0ubuntu4 [20.0 kB] Get:4 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libcrypt1 amd64 1:4.4.30-1 [80.7 kB] Get:5 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 linux-libc-dev amd64 5.19.0-23.24 [1345 kB] Get:6 http://ftpmaster.internal/ubuntu lunar/main amd64 libcc1-0 amd64 12.2.0-9ubuntu1 [46.4 kB] Get:7 http://ftpmaster.internal/ubuntu lunar/main amd64 gcc-12-base amd64 12.2.0-9ubuntu1 [19.5 kB] Get:8 http://ftpmaster.internal/ubuntu lunar/main amd64 libgcc-s1 amd64 12.2.0-9ubuntu1 [54.2 kB] Get:9 http://ftpmaster.internal/ubuntu lunar/main amd64 libgomp1 amd64 12.2.0-9ubuntu1 [125 kB] Get:10 http://ftpmaster.internal/ubuntu lunar/main amd64 libitm1 amd64 12.2.0-9ubuntu1 [29.4 kB] Get:11 http://ftpmaster.internal/ubuntu lunar/main amd64 libatomic1 amd64 12.2.0-9ubuntu1 [10.4 kB] Get:12 http://ftpmaster.internal/ubuntu lunar/main amd64 libasan8 amd64 12.2.0-9ubuntu1 [2433 kB] Get:13 http://ftpmaster.internal/ubuntu lunar/main amd64 liblsan0 amd64 12.2.0-9ubuntu1 [1060 kB] Get:14 http://ftpmaster.internal/ubuntu lunar/main amd64 libtsan2 amd64 12.2.0-9ubuntu1 [2456 kB] Get:15 http://ftpmaster.internal/ubuntu lunar/main amd64 libubsan1 amd64 12.2.0-9ubuntu1 [969 kB] Get:16 http://ftpmaster.internal/ubuntu lunar/main amd64 libquadmath0 amd64 12.2.0-9ubuntu1 [152 kB] Get:17 http://ftpmaster.internal/ubuntu lunar/main amd64 g++-12 amd64 12.2.0-9ubuntu1 [12.0 MB] Get:18 http://ftpmaster.internal/ubuntu lunar/main amd64 libstdc++-12-dev amd64 12.2.0-9ubuntu1 [2158 kB] Get:19 http://ftpmaster.internal/ubuntu lunar/main amd64 libgcc-12-dev amd64 12.2.0-9ubuntu1 [2577 kB] Get:20 http://ftpmaster.internal/ubuntu lunar/main amd64 gcc-12 amd64 12.2.0-9ubuntu1 [21.4 MB] Get:21 http://ftpmaster.internal/ubuntu lunar/main amd64 cpp-12 amd64 12.2.0-9ubuntu1 [10.6 MB] Get:22 http://ftpmaster.internal/ubuntu lunar/main amd64 libstdc++6 amd64 12.2.0-9ubuntu1 [678 kB] Get:23 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 zlib1g amd64 1:1.2.11.dfsg-4.1ubuntu2 [58.8 kB] Get:24 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libgprofng0 amd64 2.39-8ubuntu2 [897 kB] Get:25 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libctf0 amd64 2.39-8ubuntu2 [97.4 kB] Get:26 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libctf-nobfd0 amd64 2.39-8ubuntu2 [99.9 kB] Get:27 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libbinutils amd64 2.39-8ubuntu2 [610 kB] Get:28 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 binutils-common amd64 2.39-8ubuntu2 [233 kB] Get:29 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 binutils amd64 2.39-8ubuntu2 [3240 B] Get:30 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 binutils-x86-64-linux-gnu amd64 2.39-8ubuntu2 [2402 kB] Get:31 http://ftpmaster.internal/ubuntu lunar/main amd64 libc6 amd64 2.36-0ubuntu4 [3163 kB] Get:32 http://ftpmaster.internal/ubuntu lunar/main amd64 base-files amd64 12.3ubuntu1 [73.4 kB] Get:33 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 debianutils amd64 5.7-0.4 [103 kB] Get:34 http://ftpmaster.internal/ubuntu lunar/main amd64 bash amd64 5.2-1ubuntu2 [788 kB] Get:35 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 grep amd64 3.8-3 [159 kB] Get:36 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 perl-modules-5.36 all 5.36.0-4ubuntu2 [2984 kB] Get:37 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libperl5.36 amd64 5.36.0-4ubuntu2 [4808 kB] Get:38 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 perl amd64 5.36.0-4ubuntu2 [235 kB] Get:39 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 perl-base amd64 5.36.0-4ubuntu2 [1779 kB] Get:40 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libgdbm6 amd64 1.23-3 [33.2 kB] Get:41 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libgdbm-compat4 amd64 1.23-3 [6524 B] Get:42 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libselinux1 amd64 3.4-1build1 [77.9 kB] Get:43 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 base-passwd amd64 3.6.1 [49.9 kB] Get:44 http://ftpmaster.internal/ubuntu lunar/main amd64 usrmerge all 29ubuntu2 [55.8 kB] Get:45 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 init-system-helpers all 1.65.2 [38.1 kB] Get:46 http://ftpmaster.internal/ubuntu lunar/main amd64 libc-bin amd64 2.36-0ubuntu4 [675 kB] Get:47 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 liblz4-1 amd64 1.9.4-1 [63.1 kB] Get:48 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 liblzma5 amd64 5.2.7-0.1 [101 kB] Get:49 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libapparmor1 amd64 3.0.7-1ubuntu3 [36.8 kB] Get:50 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libaudit-common all 1:3.0.7-1ubuntu2 [5018 B] Get:51 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libcap-ng0 amd64 0.8.3-1build1 [15.2 kB] Get:52 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libaudit1 amd64 1:3.0.7-1ubuntu2 [45.4 kB] Get:53 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libseccomp2 amd64 2.5.4-1ubuntu2 [46.2 kB] Get:54 http://ftpmaster.internal/ubuntu lunar/main amd64 systemd-sysv amd64 251.4-1ubuntu7 [11.2 kB] Get:55 http://ftpmaster.internal/ubuntu lunar/main amd64 systemd amd64 251.4-1ubuntu7 [2808 kB] Get:56 http://ftpmaster.internal/ubuntu lunar/main amd64 libsystemd-shared amd64 251.4-1ubuntu7 [1703 kB] Get:57 http://ftpmaster.internal/ubuntu lunar/main amd64 libsystemd0 amd64 251.4-1ubuntu7 [323 kB] Get:58 http://ftpmaster.internal/ubuntu lunar/main amd64 libudev1 amd64 251.4-1ubuntu7 [79.8 kB] Get:59 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libapt-pkg6.0 amd64 2.5.4 [902 kB] Get:60 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libgpg-error0 amd64 1.46-1 [68.9 kB] Get:61 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 gpgv amd64 2.2.40-1ubuntu1 [137 kB] Get:62 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libunistring2 amd64 1.0-2 [536 kB] Get:63 http://ftpmaster.internal/ubuntu lunar/main amd64 libidn2-0 amd64 2.3.3-1build1 [62.9 kB] Get:64 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libffi8 amd64 3.4.4-1 [23.8 kB] Get:65 http://ftpmaster.internal/ubuntu lunar/main amd64 libp11-kit0 amd64 0.24.1-1ubuntu2 [246 kB] Get:66 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libtasn1-6 amd64 4.19.0-2 [43.9 kB] Get:67 http://ftpmaster.internal/ubuntu lunar/main amd64 libgnutls30 amd64 3.7.7-2ubuntu2 [976 kB] Get:68 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 apt amd64 2.5.4 [1378 kB] Get:69 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 init amd64 1.65.2 [4808 B] Get:70 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 sgml-base all 1.31 [11.4 kB] Get:71 http://ftpmaster.internal/ubuntu lunar/main amd64 libsemanage-common all 3.4-1build1 [9544 B] Get:72 http://ftpmaster.internal/ubuntu lunar/main amd64 libsemanage2 amd64 3.4-1build1 [93.2 kB] Get:73 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libjson-c5 amd64 0.16-2 [32.8 kB] Get:74 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 readline-common all 8.2-1.1 [55.1 kB] Get:75 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libreadline8 amd64 8.2-1.1 [150 kB] Get:76 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libsqlite3-0 amd64 3.39.4-1 [656 kB] Get:77 http://ftpmaster.internal/ubuntu lunar/main amd64 tzdata all 2022f-0ubuntu1 [400 kB] Get:78 http://ftpmaster.internal/ubuntu lunar/main amd64 libpng16-16 amd64 1.6.38-2 [186 kB] Get:79 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 xz-utils amd64 5.2.7-0.1 [142 kB] Get:80 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libfakeroot amd64 1.30.1-1ubuntu1 [30.9 kB] Get:81 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 fakeroot amd64 1.30.1-1ubuntu1 [60.1 kB] Get:82 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libassuan0 amd64 2.5.5-5 [37.2 kB] Get:83 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 gpg amd64 2.2.40-1ubuntu1 [523 kB] Get:84 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 gpgconf amd64 2.2.40-1ubuntu1 [93.8 kB] Get:85 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 gpg-agent amd64 2.2.40-1ubuntu1 [217 kB] Get:86 http://ftpmaster.internal/ubuntu lunar/main amd64 lto-disabled-list all 35 [12.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 92.2 MB in 1s (125 MB/s) (Reading database ... 13569 files and directories currently installed.) 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Setting up binutils-x86-64-linux-gnu (2.39-8ubuntu2) ... Setting up gpg-agent (2.2.40-1ubuntu1) ... Setting up libstdc++-12-dev:amd64 (12.2.0-9ubuntu1) ... Setting up binutils (2.39-8ubuntu2) ... Setting up perl (5.36.0-4ubuntu2) ... Setting up gcc-12 (12.2.0-9ubuntu1) ... Setting up g++-12 (12.2.0-9ubuntu1) ... Processing triggers for debianutils (5.7-0.4) ... Processing triggers for libc-bin (2.36-0ubuntu4) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-24626254 amd64 lunar-proposed -c chroot:build-PACKAGEBUILD-24626254 --arch=amd64 --dist=lunar-proposed --nolog -A twopaco_1.0.0+dfsg-1.dsc Initiating build PACKAGEBUILD-24626254 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-131-generic #147-Ubuntu SMP Fri Oct 14 17:07:22 UTC 2022 x86_64 sbuild (Debian sbuild) 0.79.0 (05 February 2020) on lcy02-amd64-060.buildd +==============================================================================+ | twopaco 1.0.0+dfsg-1 (amd64) Sun, 06 Nov 2022 07:38:16 +0000 | +==============================================================================+ Package: twopaco Version: 1.0.0+dfsg-1 Source Version: 1.0.0+dfsg-1 Distribution: lunar-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-24626254/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/twopaco-XCMz7x/resolver-CkMlBH' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- twopaco_1.0.0+dfsg-1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/twopaco-XCMz7x/twopaco-1.0.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/twopaco-XCMz7x' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cmake, libtbb-dev, libtclap-dev, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), cmake, libtbb-dev, libtclap-dev, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [387 B] Get:5 copy:/<>/apt_archive ./ Packages [466 B] Fetched 1810 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.34 perl-modules-5.34 sgml-base Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data debhelper debugedit dh-autoreconf dh-elpa-helper dh-strip-nondeterminism dwz emacsen-common file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libbrotli1 libcurl4 libdebhelper-perl libdw1 libelf1 libexpat1 libfile-stripnondeterminism-perl libhwloc15 libicu71 libjsoncpp25 libldap-2.5-0 libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libssh-4 libsub-override-perl libtbb-dev libtbb12 libtbbbind-2-5 libtbbmalloc2 libtclap-dev libtool libuchardet0 libuv1 libxml2 m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc cmake-doc ninja-build cmake-format dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libhwloc-contrib-plugins libtbb-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libhwloc-plugins libldap-common publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data debhelper debugedit dh-autoreconf dh-elpa-helper dh-strip-nondeterminism dwz emacsen-common file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libbrotli1 libcurl4 libdebhelper-perl libdw1 libelf1 libexpat1 libfile-stripnondeterminism-perl libhwloc15 libicu71 libjsoncpp25 libldap-2.5-0 libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libssh-4 libsub-override-perl libtbb-dev libtbb12 libtbbbind-2-5 libtbbmalloc2 libtclap-dev libtool libuchardet0 libuv1 libxml2 m4 man-db po-debconf sbuild-build-depends-main-dummy 0 upgraded, 56 newly installed, 0 to remove and 0 not upgraded. Need to get 34.6 MB of archives. After this operation, 128 MB of additional disk space will be used. 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libjsoncpp25 amd64 1.9.5-4 [80.3 kB] Get:32 http://ftpmaster.internal/ubuntu lunar/main amd64 librhash0 amd64 1.4.2-1ubuntu1 [125 kB] Get:33 http://ftpmaster.internal/ubuntu lunar/main amd64 dh-elpa-helper all 2.0.9ubuntu1 [7610 B] Get:34 http://ftpmaster.internal/ubuntu lunar/main amd64 emacsen-common all 3.0.4 [14.9 kB] Get:35 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 cmake-data all 3.24.3-1ubuntu1 [2025 kB] Get:36 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 cmake amd64 3.24.3-1ubuntu1 [8979 kB] Get:37 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libdebhelper-perl all 13.10.1ubuntu1 [67.1 kB] Get:38 http://ftpmaster.internal/ubuntu lunar/main amd64 libtool all 2.4.7-4 [166 kB] Get:39 http://ftpmaster.internal/ubuntu lunar/main amd64 dh-autoreconf all 20 [16.1 kB] Get:40 http://ftpmaster.internal/ubuntu lunar/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:41 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libsub-override-perl all 0.09-4 [8706 B] Get:42 http://ftpmaster.internal/ubuntu lunar/main amd64 libfile-stripnondeterminism-perl all 1.13.0-1 [18.1 kB] Get:43 http://ftpmaster.internal/ubuntu lunar/main amd64 dh-strip-nondeterminism all 1.13.0-1 [5344 B] Get:44 http://ftpmaster.internal/ubuntu lunar/main amd64 libdw1 amd64 0.187-4 [248 kB] Get:45 http://ftpmaster.internal/ubuntu lunar/main amd64 debugedit amd64 1:5.0-5 [46.1 kB] Get:46 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 dwz amd64 0.14+20220924-2 [112 kB] Get:47 http://ftpmaster.internal/ubuntu lunar/main amd64 gettext amd64 0.21-8 [867 kB] Get:48 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:49 http://ftpmaster.internal/ubuntu lunar/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] Get:50 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 debhelper all 13.10.1ubuntu1 [924 kB] Get:51 http://ftpmaster.internal/ubuntu lunar/universe amd64 libhwloc15 amd64 2.8.0-1 [160 kB] Get:52 http://ftpmaster.internal/ubuntu lunar-proposed/universe amd64 libtbbmalloc2 amd64 2021.7.0-1ubuntu1 [47.6 kB] Get:53 http://ftpmaster.internal/ubuntu lunar-proposed/universe amd64 libtbbbind-2-5 amd64 2021.7.0-1ubuntu1 [12.2 kB] Get:54 http://ftpmaster.internal/ubuntu lunar-proposed/universe amd64 libtbb12 amd64 2021.7.0-1ubuntu1 [82.6 kB] Get:55 http://ftpmaster.internal/ubuntu lunar/universe amd64 libtclap-dev amd64 1.2.5-1 [2578 kB] Get:56 http://ftpmaster.internal/ubuntu lunar-proposed/universe amd64 libtbb-dev amd64 2021.7.0-1ubuntu1 [191 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 34.6 MB in 0s (134 MB/s) Selecting previously unselected package libelf1:amd64. 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Setting up libxml2:amd64 (2.9.14+dfsg-1.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up libdw1:amd64 (0.187-4) ... Setting up gettext (0.21-8) ... Setting up libtool (2.4.7-4) ... Setting up libarchive13:amd64 (3.6.0-1ubuntu1) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-1ubuntu2) ... Setting up libtbbbind-2-5:amd64 (2021.7.0-1ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up dwz (0.14+20220924-2) ... Setting up groff-base (1.22.4-8build1) ... Setting up debugedit (1:5.0-5) ... Setting up libcurl4:amd64 (7.86.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtbb12:amd64 (2021.7.0-1ubuntu1) ... Setting up man-db (2.11.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up cmake (3.24.3-1ubuntu1) ... Setting up libtbb-dev:amd64 (2021.7.0-1ubuntu1) ... Setting up debhelper (13.10.1ubuntu1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.36-0ubuntu4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-131-generic #147-Ubuntu SMP Fri Oct 14 17:07:22 UTC 2022 amd64 (x86_64) Toolchain package versions: binutils_2.39-8ubuntu2 dpkg-dev_1.21.9ubuntu1 g++-12_12.2.0-9ubuntu1 gcc-12_12.2.0-9ubuntu1 libc6-dev_2.36-0ubuntu4 libstdc++-12-dev_12.2.0-9ubuntu1 libstdc++6_12.2.0-9ubuntu1 linux-libc-dev_5.19.0-23.24 Package versions: adduser_3.121ubuntu1 advancecomp_2.3-1 apt_2.5.4 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-8 autotools-dev_20220109.1 base-files_12.3ubuntu1 base-passwd_3.6.1 bash_5.2-1ubuntu2 binutils_2.39-8ubuntu2 binutils-common_2.39-8ubuntu2 binutils-x86-64-linux-gnu_2.39-8ubuntu2 bsdextrautils_2.38-4ubuntu1 bsdutils_1:2.38-4ubuntu1 build-essential_12.9ubuntu3 bzip2_1.0.8-5build1 ca-certificates_20211016 cmake_3.24.3-1ubuntu1 cmake-data_3.24.3-1ubuntu1 coreutils_8.32-4.1ubuntu1 cpp_4:12.2.0-1ubuntu1 cpp-12_12.2.0-9ubuntu1 dash_0.5.11+git20210903+057cd650a4ed-8ubuntu1 debconf_1.5.79ubuntu1 debhelper_13.10.1ubuntu1 debianutils_5.7-0.4 debugedit_1:5.0-5 dh-autoreconf_20 dh-elpa-helper_2.0.9ubuntu1 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dpkg_1.21.9ubuntu1 dpkg-dev_1.21.9ubuntu1 dwz_0.14+20220924-2 e2fsprogs_1.46.5-2ubuntu2 emacsen-common_3.0.4 fakeroot_1.30.1-1ubuntu1 file_1:5.41-4 findutils_4.9.0-3ubuntu1 g++_4:12.2.0-1ubuntu1 g++-12_12.2.0-9ubuntu1 gcc_4:12.2.0-1ubuntu1 gcc-12_12.2.0-9ubuntu1 gcc-12-base_12.2.0-9ubuntu1 gettext_0.21-8 gettext-base_0.21-8 gpg_2.2.40-1ubuntu1 gpg-agent_2.2.40-1ubuntu1 gpgconf_2.2.40-1ubuntu1 gpgv_2.2.40-1ubuntu1 grep_3.8-3 groff-base_1.22.4-8build1 gzip_1.12-1ubuntu1 hostname_3.23ubuntu2 init_1.65.2 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-1 libapparmor1_3.0.7-1ubuntu3 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libarchive13_3.6.0-1ubuntu1 libargon2-1_0~20171227-0.3 libasan8_12.2.0-9ubuntu1 libassuan0_2.5.5-5 libatomic1_12.2.0-9ubuntu1 libattr1_1:2.5.1-1build1 libaudit-common_1:3.0.7-1ubuntu2 libaudit1_1:3.0.7-1ubuntu2 libbinutils_2.39-8ubuntu2 libblkid1_2.38-4ubuntu1 libbrotli1_1.0.9-2build7 libbz2-1.0_1.0.8-5build1 libc-bin_2.36-0ubuntu4 libc-dev-bin_2.36-0ubuntu4 libc6_2.36-0ubuntu4 libc6-dev_2.36-0ubuntu4 libcap-ng0_0.8.3-1build1 libcap2_1:2.44-1build3 libcc1-0_12.2.0-9ubuntu1 libcom-err2_1.46.5-2ubuntu2 libcrypt-dev_1:4.4.30-1 libcrypt1_1:4.4.30-1 libcryptsetup12_2:2.5.0-2ubuntu1 libctf-nobfd0_2.39-8ubuntu2 libctf0_2.39-8ubuntu2 libcurl4_7.86.0-1 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.264ubuntu1 libdebhelper-perl_13.10.1ubuntu1 libdevmapper1.02.1_2:1.02.185-1ubuntu1 libdpkg-perl_1.21.9ubuntu1 libdw1_0.187-4 libelf1_0.187-4 libexpat1_2.5.0-1 libext2fs2_1.46.5-2ubuntu2 libfakeroot_1.30.1-1ubuntu1 libfdisk1_2.38-4ubuntu1 libffi8_3.4.4-1 libfile-stripnondeterminism-perl_1.13.0-1 libgcc-12-dev_12.2.0-9ubuntu1 libgcc-s1_12.2.0-9ubuntu1 libgcrypt20_1.10.1-2ubuntu1 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1ubuntu2 libgnutls30_3.7.7-2ubuntu2 libgomp1_12.2.0-9ubuntu1 libgpg-error0_1.46-1 libgprofng0_2.39-8ubuntu2 libgssapi-krb5-2_1.20-1 libhogweed6_3.8.1-2 libhwloc15_2.8.0-1 libicu71_71.1-3ubuntu1 libidn2-0_2.3.3-1build1 libip4tc2_1.8.7-1ubuntu6 libisl23_0.25-1 libitm1_12.2.0-9ubuntu1 libjson-c5_0.16-2 libjsoncpp25_1.9.5-4 libk5crypto3_1.20-1 libkeyutils1_1.6.3-1 libkmod2_30+20220630-3ubuntu1 libkrb5-3_1.20-1 libkrb5support0_1.20-1 libldap-2.5-0_2.5.13+dfsg-1ubuntu2 liblockfile-bin_1.17-1build2 liblockfile1_1.17-1build2 liblsan0_12.2.0-9ubuntu1 liblz4-1_1.9.4-1 liblzma5_5.2.7-0.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmount1_2.38-4ubuntu1 libmpc3_1.2.1-2build1 libmpfr6_4.1.0-3build3 libncurses6_6.3+20220423-2 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnghttp2-14_1.50.0-1 libnpth0_1.6-3build2 libnsl-dev_1.3.0-2build2 libnsl2_1.3.0-2build2 libp11-kit0_0.24.1-1ubuntu2 libpam-modules_1.5.2-2ubuntu1 libpam-modules-bin_1.5.2-2ubuntu1 libpam-runtime_1.5.2-2ubuntu1 libpam0g_1.5.2-2ubuntu1 libpcre2-8-0_10.40-1ubuntu1 libpcre3_2:8.39-14 libperl5.34_5.34.0-5ubuntu1 libperl5.36_5.36.0-4ubuntu2 libpipeline1_1.5.6-3 libpng16-16_1.6.38-2 libprocps8_2:3.3.17-7ubuntu1 libpsl5_0.21.0-1.2build2 libquadmath0_12.2.0-9ubuntu1 libreadline8_8.2-1.1 librhash0_1.4.2-1ubuntu1 librtmp1_2.4+20151223.gitfa8646d.1-2build4 libsasl2-2_2.1.28+dfsg-6ubuntu2 libsasl2-modules-db_2.1.28+dfsg-6ubuntu2 libseccomp2_2.5.4-1ubuntu2 libselinux1_3.4-1build1 libsemanage-common_3.4-1build1 libsemanage2_3.4-1build1 libsepol2_3.4-2 libsmartcols1_2.38-4ubuntu1 libsqlite3-0_3.39.4-1 libss2_1.46.5-2ubuntu2 libssh-4_0.10.4-2 libssl3_3.0.5-2ubuntu1 libstdc++-12-dev_12.2.0-9ubuntu1 libstdc++6_12.2.0-9ubuntu1 libsub-override-perl_0.09-4 libsystemd-shared_251.4-1ubuntu7 libsystemd0_251.4-1ubuntu7 libtasn1-6_4.19.0-2 libtbb-dev_2021.7.0-1ubuntu1 libtbb12_2021.7.0-1ubuntu1 libtbbbind-2-5_2021.7.0-1ubuntu1 libtbbmalloc2_2021.7.0-1ubuntu1 libtclap-dev_1.2.5-1 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-4 libtsan2_12.2.0-9ubuntu1 libubsan1_12.2.0-9ubuntu1 libuchardet0_0.0.7-1build2 libudev1_251.4-1ubuntu7 libunistring2_1.0-2 libuuid1_2.38-4ubuntu1 libuv1_1.44.2-1 libxml2_2.9.14+dfsg-1.1 libxxhash0_0.8.1-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_5.19.0-23.24 lockfile-progs_0.1.19build1 login_1:4.11.1+dfsg1-2ubuntu1 logsave_1.46.5-2ubuntu2 lsb-base_11.2ubuntu1 lto-disabled-list_35 m4_1.4.19-1 make_4.3-4.1build1 man-db_2.11.0-1 mawk_1.3.4.20200120-3.1 mount_2.38-4ubuntu1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 openssl_3.0.5-2ubuntu1 optipng_0.7.7-2build1 passwd_1:4.11.1+dfsg1-2ubuntu1 patch_2.7.6-7build2 perl_5.36.0-4ubuntu2 perl-base_5.36.0-4ubuntu2 perl-modules-5.34_5.34.0-5ubuntu1 perl-modules-5.36_5.36.0-4ubuntu2 pinentry-curses_1.2.0-2ubuntu1 pkgbinarymangler_149 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3.1 procps_2:3.3.17-7ubuntu1 readline-common_8.2-1.1 rpcsvc-proto_1.4.2-0ubuntu6 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1ubuntu2 sensible-utils_0.0.17 sgml-base_1.31 systemd_251.4-1ubuntu7 systemd-sysv_251.4-1ubuntu7 sysvinit-utils_3.04-1ubuntu1 tar_1.34+dfsg-1build3 tzdata_2022f-0ubuntu1 ubuntu-keyring_2021.03.26 usrmerge_29ubuntu2 util-linux_2.38-4ubuntu1 util-linux-extra_2.38-4ubuntu1 xz-utils_5.2.7-0.1 zlib1g_1:1.2.11.dfsg-4.1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: twopaco Binary: twopaco Architecture: any Version: 1.0.0+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/medvedevgroup/TwoPaCo Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/twopaco Vcs-Git: https://salsa.debian.org/med-team/twopaco.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, libtbb-dev, libtclap-dev Package-List: twopaco deb science optional arch=any Checksums-Sha1: 7ac2cf80ebf233ce853c55191f3ca0bfa5b583d0 179408 twopaco_1.0.0+dfsg.orig.tar.xz 86df1a2f68e225530f500de5903ab7170e0f5640 5356 twopaco_1.0.0+dfsg-1.debian.tar.xz Checksums-Sha256: 0ec51c6c6d1ae2cbf470600ea90109d9401e00eae5a042e570e50c49ef636e38 179408 twopaco_1.0.0+dfsg.orig.tar.xz 63a88dbcacb9c2da0f4353aa54d80d6b64262890b853bf17a886a228e2a5f42c 5356 twopaco_1.0.0+dfsg-1.debian.tar.xz Files: c460fdfe40ff4d13f4bb78320a526fba 179408 twopaco_1.0.0+dfsg.orig.tar.xz 7629a6586711642df0b2728632bce45d 5356 twopaco_1.0.0+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmM1MtgSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHMLoP/0W2fRLON9c9KtktzZwFVBoTVn4p2wj6 +hVsxZvhzH5PNI/4mKBUMyrjR9qhmUgUD/G63+uV45jpDhwhR4OGhJukAbStW1pu TPXZ9YOIJ9ol1tX7X6FQuZFOXs3+kFPGcWFC/DlD66ECXrw3Uje1KtE1ASUR18oz cA72B8++w4x57tP/hSlcTwTd/mtxodN+aqCaML7vSIXr4+STZzfQk0Z33TqPCyve uPmYeAU06Cl/hGySraAq3sAzJ2imsK7oTq7AWc4truNefnbzWWyZNsiPT+stjtXJ B/memPdSEtQXhVw+kubVNDb0v6NcNEZKePAlT14vRidsSafZ5nidTHJA7FQ3bFau G9eR5xxR3WpQmaB4eOgab3cvum+eqAu0g+0yNl/w2jaRPjVp37q0Hel1MlM4uGNV DvlW0DqTBKsPQuU4tFNSUDPymV861HYRxL2zuri7VlwTErx2XoQNi06ZBOFIcGsv aoTXetUJjhXyTxxAiSf6PUWDtJgnhGpkxtTomsl5u/AihyqLaYg5jJHFd7+HO48P XAs67ygzGJwHjjeDaj6ODG1P0SLxASuMNQW5NlOJgwn9i28fp4qQOxNKSSsSbJLW OeCmJoc8vn6v1muA8LzPemFhICj9OKQeoWfDx0OiwPq5/1fGNC8L5U9lWtvoNS7C bAh5Uwf+BrCU =vakc -----END PGP SIGNATURE----- gpgv: Signature made Thu Sep 29 05:53:28 2022 UTC gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify signature ./twopaco_1.0.0+dfsg-1.dsc dpkg-source: info: extracting twopaco in /<> dpkg-source: info: unpacking twopaco_1.0.0+dfsg.orig.tar.xz dpkg-source: info: unpacking twopaco_1.0.0+dfsg-1.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-24626254 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-24626254 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-24626254 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -b -rfakeroot dpkg-buildpackage: info: source package twopaco dpkg-buildpackage: info: source version 1.0.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --sourcedir=src dh_auto_clean -O--sourcedir=src dh_autoreconf_clean -O--sourcedir=src dh_clean -O--sourcedir=src debian/rules binary dh binary --sourcedir=src dh_update_autotools_config -O--sourcedir=src dh_autoreconf -O--sourcedir=src dh_auto_configure -O--sourcedir=src cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu ../src -- The C compiler identification is GNU 12.2.0 -- The CXX compiler identification is GNU 12.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /<>/obj-x86_64-linux-gnu dh_auto_build -O--sourcedir=src cd obj-x86_64-linux-gnu && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -S/<>/src -B/<>/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles /<>/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' make -f graphdump/CMakeFiles/graphdump.dir/build.make graphdump/CMakeFiles/graphdump.dir/depend make -f graphconstructor/CMakeFiles/twopaco.dir/build.make graphconstructor/CMakeFiles/twopaco.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/src /<>/src/graphdump /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/graphdump /<>/obj-x86_64-linux-gnu/graphdump/CMakeFiles/graphdump.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/src /<>/src/graphconstructor /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/graphconstructor /<>/obj-x86_64-linux-gnu/graphconstructor/CMakeFiles/twopaco.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f graphdump/CMakeFiles/graphdump.dir/build.make graphdump/CMakeFiles/graphdump.dir/build make -f graphconstructor/CMakeFiles/twopaco.dir/build.make graphconstructor/CMakeFiles/twopaco.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 14%] Building CXX object graphdump/CMakeFiles/graphdump.dir/__/common/dnachar.cpp.o [ 14%] Building CXX object graphdump/CMakeFiles/graphdump.dir/graphdump.cpp.o cd /<>/obj-x86_64-linux-gnu/graphdump && /usr/bin/c++ -I/<>/src/graphdump/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphdump/CMakeFiles/graphdump.dir/__/common/dnachar.cpp.o -MF CMakeFiles/graphdump.dir/__/common/dnachar.cpp.o.d -o CMakeFiles/graphdump.dir/__/common/dnachar.cpp.o -c /<>/src/common/dnachar.cpp [ 21%] Building CXX object graphdump/CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o [ 28%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o cd /<>/obj-x86_64-linux-gnu/graphdump && /usr/bin/c++ -I/<>/src/graphdump/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphdump/CMakeFiles/graphdump.dir/graphdump.cpp.o -MF CMakeFiles/graphdump.dir/graphdump.cpp.o.d -o CMakeFiles/graphdump.dir/graphdump.cpp.o -c /<>/src/graphdump/graphdump.cpp cd /<>/obj-x86_64-linux-gnu/graphdump && /usr/bin/c++ -I/<>/src/graphdump/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphdump/CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o -MF CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o.d -o CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o -c /<>/src/common/streamfastaparser.cpp cd /<>/obj-x86_64-linux-gnu/graphconstructor && /usr/bin/c++ -I/<>/src/graphconstructor -I/<>/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o -MF CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o.d -o CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o -c /<>/src/common/dnachar.cpp [ 35%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/constructor.cpp.o cd /<>/obj-x86_64-linux-gnu/graphconstructor && /usr/bin/c++ -I/<>/src/graphconstructor -I/<>/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/constructor.cpp.o -MF CMakeFiles/twopaco.dir/constructor.cpp.o.d -o CMakeFiles/twopaco.dir/constructor.cpp.o -c /<>/src/graphconstructor/constructor.cpp [ 42%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o cd /<>/obj-x86_64-linux-gnu/graphconstructor && /usr/bin/c++ -I/<>/src/graphconstructor -I/<>/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o -MF CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o.d -o CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o -c /<>/src/graphconstructor/concurrentbitvector.cpp [ 50%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/compressedstring.cpp.o cd /<>/obj-x86_64-linux-gnu/graphconstructor && /usr/bin/c++ -I/<>/src/graphconstructor -I/<>/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/compressedstring.cpp.o -MF CMakeFiles/twopaco.dir/compressedstring.cpp.o.d -o CMakeFiles/twopaco.dir/compressedstring.cpp.o -c /<>/src/graphconstructor/compressedstring.cpp [ 57%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o cd /<>/obj-x86_64-linux-gnu/graphconstructor && /usr/bin/c++ -I/<>/src/graphconstructor -I/<>/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o -MF CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o.d -o CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o -c /<>/src/common/streamfastaparser.cpp [ 64%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/test.cpp.o cd /<>/obj-x86_64-linux-gnu/graphconstructor && /usr/bin/c++ -I/<>/src/graphconstructor -I/<>/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/test.cpp.o -MF CMakeFiles/twopaco.dir/test.cpp.o.d -o CMakeFiles/twopaco.dir/test.cpp.o -c /<>/src/graphconstructor/test.cpp [ 71%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/vertexenumerator.cpp.o cd /<>/obj-x86_64-linux-gnu/graphconstructor && /usr/bin/c++ -I/<>/src/graphconstructor -I/<>/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/vertexenumerator.cpp.o -MF CMakeFiles/twopaco.dir/vertexenumerator.cpp.o.d -o CMakeFiles/twopaco.dir/vertexenumerator.cpp.o -c /<>/src/graphconstructor/vertexenumerator.cpp [ 78%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o cd /<>/obj-x86_64-linux-gnu/graphconstructor && /usr/bin/c++ -I/<>/src/graphconstructor -I/<>/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o -MF CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o.d -o CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o -c /<>/src/common/spooky/SpookyV2.cpp [ 85%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/common.cpp.o cd /<>/obj-x86_64-linux-gnu/graphconstructor && /usr/bin/c++ -I/<>/src/graphconstructor -I/<>/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/common.cpp.o -MF CMakeFiles/twopaco.dir/common.cpp.o.d -o CMakeFiles/twopaco.dir/common.cpp.o -c /<>/src/graphconstructor/common.cpp [ 92%] Linking CXX executable graphdump cd /<>/obj-x86_64-linux-gnu/graphdump && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphdump.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro CMakeFiles/graphdump.dir/graphdump.cpp.o CMakeFiles/graphdump.dir/__/common/dnachar.cpp.o CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o -o graphdump -ltbb -lpthread make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 92%] Built target graphdump [100%] Linking CXX executable twopaco cd /<>/obj-x86_64-linux-gnu/graphconstructor && /usr/bin/cmake -E cmake_link_script CMakeFiles/twopaco.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o CMakeFiles/twopaco.dir/constructor.cpp.o CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o CMakeFiles/twopaco.dir/compressedstring.cpp.o CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o CMakeFiles/twopaco.dir/test.cpp.o CMakeFiles/twopaco.dir/vertexenumerator.cpp.o CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o CMakeFiles/twopaco.dir/common.cpp.o -o twopaco -ltbb -ltbbmalloc -ltbbmalloc_proxy -lpthread make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [100%] Built target twopaco make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-x86_64-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' obj-*/graphconstructor/twopaco --test -f 34 example/example.fa Test # 0 PASSED Test # 1 PASSED Test # 2 PASSED Test # 3 PASSED Test # 4 PASSED Test # 5 PASSED Test # 6 PASSED Test # 7 PASSED Test # 8 PASSED Test # 9 PASSED obj-*/graphconstructor/twopaco -f 20 -k 11 example/example.fa -o example/example.dbg Threads = 1 Vertex length = 11 Hash functions = 5 Filter size = 1048576 Capacity = 1 Files: example/example.fa -------------------------------------------------------------------------------- Round 0, 0:1048576 Pass Filling Filtering 1 0 0 2 0 0 True junctions count = 7 False junctions count = 0 Hash table size = 7 Candidate marks count = 16 -------------------------------------------------------------------------------- Reallocating bifurcations time: 0 True marks count: 16 Edges construction time: 0 -------------------------------------------------------------------------------- Distinct junctions = 7 TwoPaCo::buildGraphMain:: allocated with scalable_malloc; freeing. TwoPaCo::buildGraphMain:: Calling scalable_allocation_command(TBBMALLOC_CLEAN_ALL_BUFFERS, 0); obj-*/graphdump/graphdump -f dot example/example.dbg -k 11 > example/example.dot make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -O--sourcedir=src dh_prep -O--sourcedir=src dh_auto_install --destdir=debian/twopaco/ -O--sourcedir=src cd obj-x86_64-linux-gnu && make -j4 install DESTDIR=/<>/twopaco-1.0.0\+dfsg/debian/twopaco AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -S/<>/src -B/<>/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RELEASE" -- Installing: /<>/debian/twopaco/usr/bin/graphdump -- Installing: /<>/debian/twopaco/usr/bin/twopaco make[1]: Leaving directory '/<>/obj-x86_64-linux-gnu' dh_installdocs -O--sourcedir=src dh_installchangelogs -O--sourcedir=src debian/rules override_dh_installexamples make[1]: Entering directory '/<>' dh_installexamples --sourcedir=/<> make[1]: Leaving directory '/<>' debian/rules override_dh_installman make[1]: Entering directory '/<>' dh_installman --sourcedir=/<> make[1]: Leaving directory '/<>' dh_installsystemduser -O--sourcedir=src dh_perl -O--sourcedir=src dh_link -O--sourcedir=src dh_strip_nondeterminism -O--sourcedir=src dh_compress -O--sourcedir=src dh_fixperms -O--sourcedir=src debian/rules override_dh_missing make[1]: Entering directory '/<>' dh_missing --list-missing dh_missing: warning: CMakeLists.txt exists in src but is not installed to anywhere dh_missing: warning: common/dnachar.cpp exists in src but is not installed to anywhere dh_missing: warning: common/dnachar.h exists in src but is not installed to anywhere dh_missing: warning: common/junctionapi.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/Makefile exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/README.md exists in src but is not installed to anywhere (related file: "/<>/example/README.md") dh_missing: warning: common/ngramhashing/characterhash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/cyclichash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example2.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example3.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example4.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example64bits.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/generalhash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/mersennetwister.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/rabinkarphash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/speedtesting.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/threewisehash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/unit.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/ztimer.h exists in src but is not installed to anywhere dh_missing: warning: common/spooky/SpookyV2.cpp exists in src but is not installed to anywhere dh_missing: warning: common/spooky/SpookyV2.h exists in src but is not installed to anywhere dh_missing: warning: common/streamfastaparser.cpp exists in src but is not installed to anywhere dh_missing: warning: common/streamfastaparser.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/CMakeLists.txt exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/assemblyedgeconstructor.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/assemblyedgeconstructor.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/bifurcationstorage.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/candidateoccurence.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/common.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/common.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/compressedstring.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/compressedstring.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/concurrentbitvector.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/concurrentbitvector.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/constructor.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/test.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/test.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/vertexenumerator.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/vertexenumerator.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/vertexrollinghash.h exists in src but is not installed to anywhere dh_missing: warning: graphdump/CMakeLists.txt exists in src but is not installed to anywhere dh_missing: warning: graphdump/glueGfa1.py exists in src but is not installed to anywhere dh_missing: warning: graphdump/glueGfa2.py exists in src but is not installed to anywhere dh_missing: warning: graphdump/graphdump.cpp exists in src but is not installed to anywhere dh_missing: warning: naiveconstructor/naiveconstructor.cpp exists in src but is not installed to anywhere While detecting missing files, dh_missing noted some files with a similar name to those that were missing. This warning /might/ be resolved by replacing references to the missing files with the similarly named ones that dh_missing found - assuming the content is identical. As an example, you might want to replace: * /<>/example/README.md with: * common/ngramhashing/README.md in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_installdocs: twopaco (0) * dh_installexamples: twopaco (10) * dh_installman: twopaco (2) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. make[1]: Leaving directory '/<>' dh_dwz -a -O--sourcedir=src dh_strip -a -O--sourcedir=src debugedit: debian/twopaco/usr/bin/graphdump: Unknown DWARF DW_FORM_0x1f20 7981e1ea21d375855899ed671053fae3218f6aba debugedit: debian/twopaco/usr/bin/twopaco: Unknown DWARF DW_FORM_0x1f20 6529190e216534273e0c64502a436f9e6b8b37f3 dh_makeshlibs -a -O--sourcedir=src dh_shlibdeps -a -O--sourcedir=src dh_installdeb -O--sourcedir=src dh_gencontrol -O--sourcedir=src dh_md5sums -O--sourcedir=src dh_builddeb -O--sourcedir=src INFO: pkgstriptranslations version 149 INFO: pkgstriptranslations version 149 pkgstriptranslations: processing twopaco (in debian/twopaco); do_strip: , oemstrip: pkgstriptranslations: processing twopaco-dbgsym (in debian/.debhelper/twopaco/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/twopaco/dbgsym-root/DEBIAN/control, package twopaco-dbgsym, directory debian/.debhelper/twopaco/dbgsym-root dpkg-deb: building package 'twopaco-dbgsym' in 'debian/.debhelper/scratch-space/build-twopaco/twopaco-dbgsym_1.0.0+dfsg-1_amd64.deb'. pkgstripfiles: processing control file: debian/twopaco/DEBIAN/control, package twopaco, directory debian/twopaco pkgstripfiles: Running PNG optimization (using 4 cpus) for package twopaco ... xargs: warning: options --max-lines and --replace/-I/-i are mutually exclusive, ignoring previous --max-lines value Renaming twopaco-dbgsym_1.0.0+dfsg-1_amd64.deb to twopaco-dbgsym_1.0.0+dfsg-1_amd64.ddeb oo pkgstripfiles: PNG optimization (2/0) for package twopaco took 7 s dpkg-deb: building package 'twopaco' in '../twopaco_1.0.0+dfsg-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../twopaco_1.0.0+dfsg-1_amd64.buildinfo dpkg-genchanges --build=binary -mLaunchpad Build Daemon -O../twopaco_1.0.0+dfsg-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-11-06T07:40:17Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ twopaco_1.0.0+dfsg-1_amd64.changes: ----------------------------------- Format: 1.8 Date: Thu, 29 Sep 2022 01:51:49 -0400 Source: twopaco Binary: twopaco Built-For-Profiles: noudeb Architecture: amd64 Version: 1.0.0+dfsg-1 Distribution: lunar-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andrius Merkys Description: twopaco - build the compacted de Bruijn graph from many complete genomes Closes: 1013182 Changes: twopaco (1.0.0+dfsg-1) unstable; urgency=medium . * Team upload. . [ Andreas Tille ] * Standards-Version: 4.6.1 (routine-update) * Remove trailing whitespace in debian/copyright (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. . [ Andrius Merkys ] * New upstream version 1.0.0+dfsg (Closes: #1013182) * Drop upstream-integrated patches. * Update manpages. Checksums-Sha1: 07b5f9c425c2cc8a2289b782320de8004445f703 5290326 twopaco-dbgsym_1.0.0+dfsg-1_amd64.ddeb 64e5b8e9b237b01707c9c512126491a9800e4317 6769 twopaco_1.0.0+dfsg-1_amd64.buildinfo 60caabf3bef425ea0c1aa596e93db7909d468db3 380022 twopaco_1.0.0+dfsg-1_amd64.deb Checksums-Sha256: f30df05418b0aeb6a222bf53634849b6cecd56e6dae7670a48e19e6e1f6002fd 5290326 twopaco-dbgsym_1.0.0+dfsg-1_amd64.ddeb a7db4e31cad559786d8575cd415b0ba935e4efe74d8e387b1b0e7401476d8a41 6769 twopaco_1.0.0+dfsg-1_amd64.buildinfo b98eb1d7c5435f026ae21a5a8f67abf6bf9607ab37d718041b0f43e014d979b3 380022 twopaco_1.0.0+dfsg-1_amd64.deb Files: a3b052e0ba170fda56ccbcbcfabf3768 5290326 debug optional twopaco-dbgsym_1.0.0+dfsg-1_amd64.ddeb 13e25efa87048d586746343986516c77 6769 science optional twopaco_1.0.0+dfsg-1_amd64.buildinfo 86005a66a4d96f7ac594472581dca647 380022 science optional twopaco_1.0.0+dfsg-1_amd64.deb /<>/twopaco_1.0.0+dfsg-1_amd64.changes.new could not be renamed to /<>/twopaco_1.0.0+dfsg-1_amd64.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: twopaco Binary: twopaco twopaco-dbgsym Architecture: amd64 Version: 1.0.0+dfsg-1 Checksums-Md5: a3b052e0ba170fda56ccbcbcfabf3768 5290326 twopaco-dbgsym_1.0.0+dfsg-1_amd64.ddeb 86005a66a4d96f7ac594472581dca647 380022 twopaco_1.0.0+dfsg-1_amd64.deb Checksums-Sha1: 07b5f9c425c2cc8a2289b782320de8004445f703 5290326 twopaco-dbgsym_1.0.0+dfsg-1_amd64.ddeb 60caabf3bef425ea0c1aa596e93db7909d468db3 380022 twopaco_1.0.0+dfsg-1_amd64.deb Checksums-Sha256: f30df05418b0aeb6a222bf53634849b6cecd56e6dae7670a48e19e6e1f6002fd 5290326 twopaco-dbgsym_1.0.0+dfsg-1_amd64.ddeb b98eb1d7c5435f026ae21a5a8f67abf6bf9607ab37d718041b0f43e014d979b3 380022 twopaco_1.0.0+dfsg-1_amd64.deb Build-Origin: Ubuntu Build-Architecture: amd64 Build-Date: Sun, 06 Nov 2022 07:40:17 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-8), autotools-dev (= 20220109.1), base-files (= 12.3ubuntu1), base-passwd (= 3.6.1), bash (= 5.2-1ubuntu2), binutils (= 2.39-8ubuntu2), binutils-common (= 2.39-8ubuntu2), binutils-x86-64-linux-gnu (= 2.39-8ubuntu2), bsdextrautils (= 2.38-4ubuntu1), bsdutils (= 1:2.38-4ubuntu1), build-essential (= 12.9ubuntu3), bzip2 (= 1.0.8-5build1), cmake (= 3.24.3-1ubuntu1), cmake-data (= 3.24.3-1ubuntu1), coreutils (= 8.32-4.1ubuntu1), cpp (= 4:12.2.0-1ubuntu1), cpp-12 (= 12.2.0-9ubuntu1), dash (= 0.5.11+git20210903+057cd650a4ed-8ubuntu1), debconf (= 1.5.79ubuntu1), debhelper (= 13.10.1ubuntu1), debianutils (= 5.7-0.4), debugedit (= 1:5.0-5), dh-autoreconf (= 20), dh-elpa-helper (= 2.0.9ubuntu1), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.8-1), dpkg (= 1.21.9ubuntu1), dpkg-dev (= 1.21.9ubuntu1), dwz (= 0.14+20220924-2), emacsen-common (= 3.0.4), file (= 1:5.41-4), findutils (= 4.9.0-3ubuntu1), g++ (= 4:12.2.0-1ubuntu1), g++-12 (= 12.2.0-9ubuntu1), gcc (= 4:12.2.0-1ubuntu1), gcc-12 (= 12.2.0-9ubuntu1), gcc-12-base (= 12.2.0-9ubuntu1), gettext (= 0.21-8), gettext-base (= 0.21-8), grep (= 3.8-3), groff-base (= 1.22.4-8build1), gzip (= 1.12-1ubuntu1), hostname (= 3.23ubuntu2), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-1), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.6.0-1ubuntu1), libasan8 (= 12.2.0-9ubuntu1), libatomic1 (= 12.2.0-9ubuntu1), libattr1 (= 1:2.5.1-1build1), libaudit-common (= 1:3.0.7-1ubuntu2), libaudit1 (= 1:3.0.7-1ubuntu2), libbinutils (= 2.39-8ubuntu2), libblkid1 (= 2.38-4ubuntu1), libbrotli1 (= 1.0.9-2build7), libbz2-1.0 (= 1.0.8-5build1), libc-bin (= 2.36-0ubuntu4), libc-dev-bin (= 2.36-0ubuntu4), libc6 (= 2.36-0ubuntu4), libc6-dev (= 2.36-0ubuntu4), libcap-ng0 (= 0.8.3-1build1), libcap2 (= 1:2.44-1build3), libcc1-0 (= 12.2.0-9ubuntu1), libcom-err2 (= 1.46.5-2ubuntu2), libcrypt-dev (= 1:4.4.30-1), libcrypt1 (= 1:4.4.30-1), libctf-nobfd0 (= 2.39-8ubuntu2), libctf0 (= 2.39-8ubuntu2), libcurl4 (= 7.86.0-1), libdb5.3 (= 5.3.28+dfsg1-0.10), libdebconfclient0 (= 0.264ubuntu1), libdebhelper-perl (= 13.10.1ubuntu1), libdpkg-perl (= 1.21.9ubuntu1), libdw1 (= 0.187-4), libelf1 (= 0.187-4), libexpat1 (= 2.5.0-1), libffi8 (= 3.4.4-1), libfile-stripnondeterminism-perl (= 1.13.0-1), libgcc-12-dev (= 12.2.0-9ubuntu1), libgcc-s1 (= 12.2.0-9ubuntu1), libgcrypt20 (= 1.10.1-2ubuntu1), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.2.1+dfsg1-1ubuntu2), libgnutls30 (= 3.7.7-2ubuntu2), libgomp1 (= 12.2.0-9ubuntu1), libgpg-error0 (= 1.46-1), libgprofng0 (= 2.39-8ubuntu2), libgssapi-krb5-2 (= 1.20-1), libhogweed6 (= 3.8.1-2), libhwloc15 (= 2.8.0-1), libicu71 (= 71.1-3ubuntu1), libidn2-0 (= 2.3.3-1build1), libisl23 (= 0.25-1), libitm1 (= 12.2.0-9ubuntu1), libjsoncpp25 (= 1.9.5-4), libk5crypto3 (= 1.20-1), libkeyutils1 (= 1.6.3-1), libkrb5-3 (= 1.20-1), libkrb5support0 (= 1.20-1), libldap-2.5-0 (= 2.5.13+dfsg-1ubuntu2), liblsan0 (= 12.2.0-9ubuntu1), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.2.7-0.1), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmount1 (= 2.38-4ubuntu1), libmpc3 (= 1.2.1-2build1), libmpfr6 (= 4.1.0-3build3), libncurses6 (= 6.3+20220423-2), libncursesw6 (= 6.3+20220423-2), libnettle8 (= 3.8.1-2), libnghttp2-14 (= 1.50.0-1), libnsl-dev (= 1.3.0-2build2), libnsl2 (= 1.3.0-2build2), libp11-kit0 (= 0.24.1-1ubuntu2), libpam-modules (= 1.5.2-2ubuntu1), libpam-modules-bin (= 1.5.2-2ubuntu1), libpam-runtime (= 1.5.2-2ubuntu1), libpam0g (= 1.5.2-2ubuntu1), libpcre2-8-0 (= 10.40-1ubuntu1), libperl5.36 (= 5.36.0-4ubuntu2), libpipeline1 (= 1.5.6-3), libprocps8 (= 2:3.3.17-7ubuntu1), libpsl5 (= 0.21.0-1.2build2), libquadmath0 (= 12.2.0-9ubuntu1), librhash0 (= 1.4.2-1ubuntu1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build4), libsasl2-2 (= 2.1.28+dfsg-6ubuntu2), libsasl2-modules-db (= 2.1.28+dfsg-6ubuntu2), libseccomp2 (= 2.5.4-1ubuntu2), libselinux1 (= 3.4-1build1), libsmartcols1 (= 2.38-4ubuntu1), libssh-4 (= 0.10.4-2), libssl3 (= 3.0.5-2ubuntu1), libstdc++-12-dev (= 12.2.0-9ubuntu1), libstdc++6 (= 12.2.0-9ubuntu1), libsub-override-perl (= 0.09-4), libsystemd0 (= 251.4-1ubuntu7), libtasn1-6 (= 4.19.0-2), libtbb-dev (= 2021.7.0-1ubuntu1), libtbb12 (= 2021.7.0-1ubuntu1), libtbbbind-2-5 (= 2021.7.0-1ubuntu1), libtbbmalloc2 (= 2021.7.0-1ubuntu1), libtclap-dev (= 1.2.5-1), libtinfo6 (= 6.3+20220423-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-4), libtsan2 (= 12.2.0-9ubuntu1), libubsan1 (= 12.2.0-9ubuntu1), libuchardet0 (= 0.0.7-1build2), libudev1 (= 251.4-1ubuntu7), libunistring2 (= 1.0-2), libuuid1 (= 2.38-4ubuntu1), libuv1 (= 1.44.2-1), libxml2 (= 2.9.14+dfsg-1.1), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 5.19.0-23.24), login (= 1:4.11.1+dfsg1-2ubuntu1), lsb-base (= 11.2ubuntu1), lto-disabled-list (= 35), m4 (= 1.4.19-1), make (= 4.3-4.1build1), man-db (= 2.11.0-1), mawk (= 1.3.4.20200120-3.1), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), patch (= 2.7.6-7build2), perl (= 5.36.0-4ubuntu2), perl-base (= 5.36.0-4ubuntu2), perl-modules-5.36 (= 5.36.0-4ubuntu2), po-debconf (= 1.0.21+nmu1), procps (= 2:3.3.17-7ubuntu1), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.8-1ubuntu2), sensible-utils (= 0.0.17), sysvinit-utils (= 3.04-1ubuntu1), tar (= 1.34+dfsg-1build3), usrmerge (= 29ubuntu2), util-linux (= 2.38-4ubuntu1), util-linux-extra (= 2.38-4ubuntu1), xz-utils (= 5.2.7-0.1), zlib1g (= 1:1.2.11.dfsg-4.1ubuntu2) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1664430709" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ twopaco_1.0.0+dfsg-1_amd64.deb ------------------------------ new Debian package, version 2.0. size 380022 bytes: control archive=1137 bytes. 917 bytes, 20 lines control 1168 bytes, 16 lines md5sums Package: twopaco Version: 1.0.0+dfsg-1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1434 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 11), libtbb12 (>= 2021.4.0), libtbbmalloc2 (>= 2017~U7) Section: science Priority: optional Homepage: https://github.com/medvedevgroup/TwoPaCo Description: build the compacted de Bruijn graph from many complete genomes TwoPaCo is an implementation of the algorithm described in the paper "TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph from many complete genomes". . This package contains two programs: . twopaco: tool for direct construction of the compressed graph from multiple complete genomes graphdump: utility that turns output of twopaco into a text format drwxr-xr-x root/root 0 2022-09-29 05:51 ./ drwxr-xr-x root/root 0 2022-09-29 05:51 ./usr/ drwxr-xr-x root/root 0 2022-09-29 05:51 ./usr/bin/ -rwxr-xr-x root/root 170512 2022-09-29 05:51 ./usr/bin/graphdump -rwxr-xr-x root/root 1120784 2022-09-29 05:51 ./usr/bin/twopaco drwxr-xr-x root/root 0 2022-09-29 05:51 ./usr/share/ drwxr-xr-x root/root 0 2022-09-29 05:51 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-09-29 05:51 ./usr/share/doc/twopaco/ -rw-r--r-- root/root 404 2022-09-29 05:51 ./usr/share/doc/twopaco/changelog.Debian.gz -rw-r--r-- root/root 3920 2022-09-29 05:31 ./usr/share/doc/twopaco/copyright drwxr-xr-x root/root 0 2022-09-29 05:51 ./usr/share/doc/twopaco/examples/ -rw-r--r-- root/root 1239 2022-09-29 03:26 ./usr/share/doc/twopaco/examples/README.md -rw-r--r-- root/root 204 2022-09-29 05:51 ./usr/share/doc/twopaco/examples/example.dbg -rw-r--r-- root/root 1294 2022-09-29 05:51 ./usr/share/doc/twopaco/examples/example.dot -rw-r--r-- root/root 929 2022-09-29 03:26 ./usr/share/doc/twopaco/examples/example.fa -rw-r--r-- root/root 70726 2022-09-29 05:51 ./usr/share/doc/twopaco/examples/example.png -rw-r--r-- root/root 129 2022-09-29 03:26 ./usr/share/doc/twopaco/examples/example.seq -rw-r--r-- root/root 37365 2022-09-29 05:51 ./usr/share/doc/twopaco/examples/example_bandage.png -rw-r--r-- root/root 588 2022-09-29 03:26 ./usr/share/doc/twopaco/examples/example_fasta.fa -rw-r--r-- root/root 1115 2022-09-29 03:26 ./usr/share/doc/twopaco/examples/example_gfa1.gfa -rw-r--r-- root/root 1374 2022-09-29 03:26 ./usr/share/doc/twopaco/examples/example_gfa2.gfa drwxr-xr-x root/root 0 2022-09-29 05:51 ./usr/share/man/ drwxr-xr-x root/root 0 2022-09-29 05:51 ./usr/share/man/man1/ -rw-r--r-- root/root 705 2022-09-29 05:51 ./usr/share/man/man1/graphdump.1.gz -rw-r--r-- root/root 846 2022-09-29 05:51 ./usr/share/man/man1/twopaco.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: 119864 Build-Time: 115 Distribution: lunar-proposed Host Architecture: amd64 Install-Time: 6 Job: twopaco_1.0.0+dfsg-1.dsc Machine Architecture: amd64 Package: twopaco Package-Time: 121 Source-Version: 1.0.0+dfsg-1 Space: 119864 Status: successful Version: 1.0.0+dfsg-1 -------------------------------------------------------------------------------- Finished at 2022-11-06T07:40:17Z Build needed 00:02:01, 119864k disk space Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=lunar --arch=amd64 PACKAGEBUILD-24626254 Scanning for processes to kill in build PACKAGEBUILD-24626254