https://launchpad.net/ubuntu/+source/vcftools/0.1.16-1/+build/15229042 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux bos02-s390x-012 4.4.0-131-generic #157-Ubuntu SMP Thu Jul 12 15:44:42 UTC 2018 s390x Buildd toolchain package versions: launchpad-buildd_163 python-lpbuildd_163 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.4 dpkg-dev_1.18.4ubuntu1.4 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 3 Aug 23:09:30 ntpdate[1804]: adjust time server 10.211.37.1 offset -0.000504 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=cosmic --arch=s390x PACKAGEBUILD-15229042 /home/buildd/filecache-default/17124f3eec304530bbb077109f97da7d4ad52147 Creating target for build PACKAGEBUILD-15229042 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=cosmic --arch=s390x PACKAGEBUILD-15229042 Starting target for build PACKAGEBUILD-15229042 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=cosmic --arch=s390x PACKAGEBUILD-15229042 'deb http://ftpmaster.internal/ubuntu cosmic main universe' 'deb http://ftpmaster.internal/ubuntu cosmic-security main universe' 'deb http://ftpmaster.internal/ubuntu cosmic-updates main universe' 'deb http://ftpmaster.internal/ubuntu cosmic-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-15229042 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=cosmic --arch=s390x PACKAGEBUILD-15229042 Updating target for build PACKAGEBUILD-15229042 Get:1 http://ftpmaster.internal/ubuntu cosmic InRelease [242 kB] Get:2 http://ftpmaster.internal/ubuntu cosmic-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu cosmic-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu cosmic-proposed InRelease [92.5 kB] Get:5 http://ftpmaster.internal/ubuntu cosmic/main s390x Packages [956 kB] Get:6 http://ftpmaster.internal/ubuntu cosmic/main Translation-en [515 kB] Get:7 http://ftpmaster.internal/ubuntu cosmic/universe s390x Packages [8332 kB] Get:8 http://ftpmaster.internal/ubuntu cosmic/universe Translation-en [5040 kB] Get:9 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x Packages [90.6 kB] Get:10 http://ftpmaster.internal/ubuntu cosmic-proposed/main Translation-en [46.3 kB] Get:11 http://ftpmaster.internal/ubuntu cosmic-proposed/universe s390x Packages [451 kB] Get:12 http://ftpmaster.internal/ubuntu cosmic-proposed/universe Translation-en [234 kB] Fetched 16.1 MB in 4s (4057 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: g++-7 libargon2-0 libprocps6 libstdc++-7-dev Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: cpp-8 g++-8 gcc-8 libargon2-1 libasan5 libgcc-8-dev libncurses6 libncursesw6 libprocps7 libstdc++-8-dev libtinfo6 libubsan1 The following packages will be upgraded: adduser apt base-files base-passwd bash binutils binutils-common binutils-s390x-linux-gnu bsdutils build-essential cpp cpp-7 debconf debianutils dpkg dpkg-dev e2fslibs e2fsprogs fdisk g++ g++-7 gcc gcc-7 gcc-7-base gcc-8-base gpg gpg-agent gpgconf gpgv libapparmor1 libapt-pkg5.0 libargon2-0 libasan4 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libcap-ng0 libcc1-0 libcom-err2 libcomerr2 libcryptsetup12 libdpkg-perl libext2fs2 libfdisk1 libgcc-7-dev libgcc1 libgcrypt20 libgmp10 libgomp1 libgpg-error0 libidn11 libidn2-0 libisl19 libitm1 libkmod2 liblz4-1 libmount1 libncurses5 libncursesw5 libnpth0 libp11-kit0 libpcre3 libperl5.26 libpng16-16 libreadline7 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libslang2 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-7-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo5 libubsan0 libudev1 libunistring2 libusb-0.1-4 libuuid1 linux-libc-dev make mount ncurses-base ncurses-bin openssl perl perl-base perl-modules-5.26 pinentry-curses pkgbinarymangler procps readline-common sed systemd systemd-sysv tar tzdata util-linux 106 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. Need to get 69.9 MB of archives. After this operation, 87.8 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu cosmic/main s390x base-files s390x 10.1ubuntu4 [58.0 kB] Get:2 http://ftpmaster.internal/ubuntu cosmic/main s390x libtinfo6 s390x 6.1+20180210-4ubuntu1 [80.5 kB] Get:3 http://ftpmaster.internal/ubuntu cosmic/main s390x debianutils s390x 4.8.6 [85.2 kB] Get:4 http://ftpmaster.internal/ubuntu cosmic/main s390x bash s390x 4.4.18-2ubuntu2 [583 kB] Get:5 http://ftpmaster.internal/ubuntu cosmic/main s390x bsdutils s390x 1:2.32-0.1ubuntu1 [58.2 kB] Get:6 http://ftpmaster.internal/ubuntu cosmic/main s390x tar s390x 1.30+dfsg-2 [230 kB] Get:7 http://ftpmaster.internal/ubuntu cosmic/main s390x dpkg s390x 1.19.0.5ubuntu3 [1121 kB] Get:8 http://ftpmaster.internal/ubuntu cosmic/main s390x libext2fs2 s390x 1.44.3-1 [154 kB] Get:9 http://ftpmaster.internal/ubuntu cosmic/main s390x e2fsprogs s390x 1.44.3-1 [374 kB] Get:10 http://ftpmaster.internal/ubuntu cosmic/main s390x ncurses-bin s390x 6.1+20180210-4ubuntu1 [160 kB] Get:11 http://ftpmaster.internal/ubuntu cosmic/main s390x perl-modules-5.26 all 5.26.2-6 [2762 kB] Get:12 http://ftpmaster.internal/ubuntu cosmic/main s390x libperl5.26 s390x 5.26.2-6 [3378 kB] Get:13 http://ftpmaster.internal/ubuntu cosmic/main s390x perl s390x 5.26.2-6 [202 kB] Get:14 http://ftpmaster.internal/ubuntu cosmic/main s390x perl-base s390x 5.26.2-6 [1310 kB] Get:15 http://ftpmaster.internal/ubuntu cosmic/main s390x sed s390x 4.5-1 [183 kB] Get:16 http://ftpmaster.internal/ubuntu cosmic/main s390x libuuid1 s390x 2.32-0.1ubuntu1 [20.0 kB] Get:17 http://ftpmaster.internal/ubuntu cosmic/main s390x libblkid1 s390x 2.32-0.1ubuntu1 [120 kB] Get:18 http://ftpmaster.internal/ubuntu cosmic/main s390x libfdisk1 s390x 2.32-0.1ubuntu1 [155 kB] Get:19 http://ftpmaster.internal/ubuntu cosmic/main s390x libncursesw6 s390x 6.1+20180210-4ubuntu1 [120 kB] Get:20 http://ftpmaster.internal/ubuntu cosmic/main s390x libpcre3 s390x 2:8.39-11 [154 kB] Get:21 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libselinux1 s390x 2.8-1build1 [64.2 kB] Get:22 http://ftpmaster.internal/ubuntu cosmic/main s390x libmount1 s390x 2.32-0.1ubuntu1 [129 kB] Get:23 http://ftpmaster.internal/ubuntu cosmic/main s390x libsmartcols1 s390x 2.32-0.1ubuntu1 [81.9 kB] Get:24 http://ftpmaster.internal/ubuntu cosmic/main s390x fdisk s390x 2.32-0.1ubuntu1 [103 kB] Get:25 http://ftpmaster.internal/ubuntu cosmic/main s390x util-linux s390x 2.32-0.1ubuntu1 [881 kB] Get:26 http://ftpmaster.internal/ubuntu cosmic/main s390x base-passwd s390x 3.5.45 [46.4 kB] Get:27 http://ftpmaster.internal/ubuntu cosmic/main s390x ncurses-base all 6.1+20180210-4ubuntu1 [18.4 kB] Get:28 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libgomp1 s390x 8.2.0-3ubuntu1 [69.9 kB] Get:29 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libitm1 s390x 8.2.0-3ubuntu1 [26.9 kB] Get:30 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x gcc-8-base s390x 8.2.0-3ubuntu1 [18.4 kB] Get:31 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libgcc1 s390x 1:8.2.0-3ubuntu1 [25.1 kB] Get:32 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libcc1-0 s390x 8.2.0-3ubuntu1 [37.2 kB] Get:33 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libatomic1 s390x 8.2.0-3ubuntu1 [8436 B] Get:34 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libstdc++6 s390x 8.2.0-3ubuntu1 [397 kB] Get:35 http://ftpmaster.internal/ubuntu cosmic/main s390x liblz4-1 s390x 1.8.2-1ubuntu1 [58.4 kB] Get:36 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libudev1 s390x 239-7ubuntu2 [52.5 kB] Get:37 http://ftpmaster.internal/ubuntu cosmic/main s390x libapt-pkg5.0 s390x 1.7.0~alpha2 [747 kB] Get:38 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x debconf all 1.5.69 [121 kB] Get:39 http://ftpmaster.internal/ubuntu cosmic/main s390x adduser all 3.117ubuntu1 [163 kB] Get:40 http://ftpmaster.internal/ubuntu cosmic/main s390x libgpg-error0 s390x 1.32-1 [53.1 kB] Get:41 http://ftpmaster.internal/ubuntu cosmic/main s390x libgcrypt20 s390x 1.8.3-1ubuntu1 [351 kB] Get:42 http://ftpmaster.internal/ubuntu cosmic/main s390x gpgv s390x 2.2.8-1ubuntu1 [181 kB] Get:43 http://ftpmaster.internal/ubuntu cosmic/main s390x libseccomp2 s390x 2.3.3-3ubuntu1 [41.3 kB] Get:44 http://ftpmaster.internal/ubuntu cosmic/main s390x apt s390x 1.7.0~alpha2 [1134 kB] Get:45 http://ftpmaster.internal/ubuntu cosmic/main s390x libapparmor1 s390x 2.12-4ubuntu7 [29.4 kB] Get:46 http://ftpmaster.internal/ubuntu cosmic/main s390x libaudit-common all 1:2.8.3-1ubuntu2 [4064 B] Get:47 http://ftpmaster.internal/ubuntu cosmic/main s390x libcap-ng0 s390x 0.7.9-1 [11.0 kB] Get:48 http://ftpmaster.internal/ubuntu cosmic/main s390x libaudit1 s390x 1:2.8.3-1ubuntu2 [37.1 kB] Get:49 http://ftpmaster.internal/ubuntu cosmic/main s390x libargon2-1 s390x 0~20171227-0.1 [35.9 kB] Get:50 http://ftpmaster.internal/ubuntu cosmic/main s390x libcryptsetup12 s390x 2:2.0.3-6ubuntu1 [124 kB] Get:51 http://ftpmaster.internal/ubuntu cosmic/main s390x libkmod2 s390x 25-1ubuntu1 [38.3 kB] Get:52 http://ftpmaster.internal/ubuntu cosmic/main s390x mount s390x 2.32-0.1ubuntu1 [100 kB] Get:53 http://ftpmaster.internal/ubuntu cosmic/main s390x libncurses6 s390x 6.1+20180210-4ubuntu1 [94.4 kB] Get:54 http://ftpmaster.internal/ubuntu cosmic/main s390x libprocps7 s390x 2:3.3.15-2ubuntu1 [31.0 kB] Get:55 http://ftpmaster.internal/ubuntu cosmic/main s390x procps s390x 2:3.3.15-2ubuntu1 [221 kB] Get:56 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x systemd s390x 239-7ubuntu2 [2667 kB] Get:57 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libsystemd0 s390x 239-7ubuntu2 [194 kB] Get:58 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x systemd-sysv s390x 239-7ubuntu2 [14.1 kB] Get:59 http://ftpmaster.internal/ubuntu cosmic/main s390x libcom-err2 s390x 1.44.3-1 [9052 B] Get:60 http://ftpmaster.internal/ubuntu cosmic/main s390x libsepol1 s390x 2.8-1 [227 kB] Get:61 http://ftpmaster.internal/ubuntu cosmic/main s390x libsemanage-common all 2.8-1build1 [7000 B] Get:62 http://ftpmaster.internal/ubuntu cosmic/main s390x libsemanage1 s390x 2.8-1build1 [79.0 kB] Get:63 http://ftpmaster.internal/ubuntu cosmic/main s390x libss2 s390x 1.44.3-1 [10.7 kB] Get:64 http://ftpmaster.internal/ubuntu cosmic/main s390x libgmp10 s390x 2:6.1.2+dfsg-3 [225 kB] Get:65 http://ftpmaster.internal/ubuntu cosmic/main s390x libunistring2 s390x 0.9.10-1ubuntu1 [357 kB] Get:66 http://ftpmaster.internal/ubuntu cosmic/main s390x libidn2-0 s390x 2.0.4-2.2 [46.9 kB] Get:67 http://ftpmaster.internal/ubuntu cosmic/main s390x libp11-kit0 s390x 0.23.12-2 [188 kB] Get:68 http://ftpmaster.internal/ubuntu cosmic/main s390x libtasn1-6 s390x 4.13-3 [34.1 kB] Get:69 http://ftpmaster.internal/ubuntu cosmic/universe s390x libncurses5 s390x 6.1+20180210-4ubuntu1 [89.1 kB] Get:70 http://ftpmaster.internal/ubuntu cosmic/main s390x libncursesw5 s390x 6.1+20180210-4ubuntu1 [108 kB] Get:71 http://ftpmaster.internal/ubuntu cosmic/main s390x libtinfo5 s390x 6.1+20180210-4ubuntu1 [76.4 kB] Get:72 http://ftpmaster.internal/ubuntu cosmic/main s390x libidn11 s390x 1.33-2.2ubuntu1 [44.7 kB] Get:73 http://ftpmaster.internal/ubuntu cosmic/main s390x readline-common all 7.0-5 [52.2 kB] Get:74 http://ftpmaster.internal/ubuntu cosmic/main s390x libreadline7 s390x 7.0-5 [117 kB] Get:75 http://ftpmaster.internal/ubuntu cosmic/main s390x libslang2 s390x 2.3.2-1ubuntu1 [417 kB] Get:76 http://ftpmaster.internal/ubuntu cosmic/main s390x libsqlite3-0 s390x 3.24.0-1 [472 kB] Get:77 http://ftpmaster.internal/ubuntu cosmic/main s390x libssl1.1 s390x 1.1.0g-2ubuntu5 [810 kB] Get:78 http://ftpmaster.internal/ubuntu cosmic/main s390x openssl s390x 1.1.0g-2ubuntu5 [519 kB] Get:79 http://ftpmaster.internal/ubuntu cosmic/main s390x tzdata all 2018e-1 [188 kB] Get:80 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libpng16-16 s390x 1.6.34-2 [171 kB] Get:81 http://ftpmaster.internal/ubuntu cosmic/main s390x libbinutils s390x 2.31.1-2ubuntu1 [304 kB] Get:82 http://ftpmaster.internal/ubuntu cosmic/main s390x binutils-common s390x 2.31.1-2ubuntu1 [194 kB] Get:83 http://ftpmaster.internal/ubuntu cosmic/main s390x binutils s390x 2.31.1-2ubuntu1 [3324 B] Get:84 http://ftpmaster.internal/ubuntu cosmic/main s390x binutils-s390x-linux-gnu s390x 2.31.1-2ubuntu1 [1676 kB] Get:85 http://ftpmaster.internal/ubuntu cosmic/main s390x libisl19 s390x 0.20-1 [523 kB] Get:86 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x cpp-8 s390x 8.2.0-3ubuntu1 [5505 kB] Get:87 http://ftpmaster.internal/ubuntu cosmic/main s390x cpp s390x 4:8.1.0-2ubuntu1 [27.6 kB] Get:88 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libasan5 s390x 8.2.0-3ubuntu1 [326 kB] Get:89 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libubsan1 s390x 8.2.0-3ubuntu1 [116 kB] Get:90 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libgcc-8-dev s390x 8.2.0-3ubuntu1 [650 kB] Get:91 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x gcc-8 s390x 8.2.0-3ubuntu1 [6258 kB] Get:92 http://ftpmaster.internal/ubuntu cosmic/main s390x gcc s390x 4:8.1.0-2ubuntu1 [5200 B] Get:93 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libstdc++-8-dev s390x 8.2.0-3ubuntu1 [1499 kB] Get:94 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x g++-8 s390x 8.2.0-3ubuntu1 [6356 kB] Get:95 http://ftpmaster.internal/ubuntu cosmic/main s390x g++ s390x 4:8.1.0-2ubuntu1 [1600 B] Get:96 http://ftpmaster.internal/ubuntu cosmic/main s390x make s390x 4.2.1-1.1 [155 kB] Get:97 http://ftpmaster.internal/ubuntu cosmic/main s390x dpkg-dev all 1.19.0.5ubuntu3 [608 kB] Get:98 http://ftpmaster.internal/ubuntu cosmic/main s390x libdpkg-perl all 1.19.0.5ubuntu3 [211 kB] Get:99 http://ftpmaster.internal/ubuntu cosmic/main s390x build-essential s390x 12.5ubuntu2 [4740 B] Get:100 http://ftpmaster.internal/ubuntu cosmic/main s390x libasan4 s390x 7.3.0-27ubuntu1 [318 kB] Get:101 http://ftpmaster.internal/ubuntu cosmic/main s390x libubsan0 s390x 7.3.0-27ubuntu1 [120 kB] Get:102 http://ftpmaster.internal/ubuntu cosmic/universe s390x g++-7 s390x 7.3.0-27ubuntu1 [5993 kB] Get:103 http://ftpmaster.internal/ubuntu cosmic/main s390x gcc-7 s390x 7.3.0-27ubuntu1 [5890 kB] Get:104 http://ftpmaster.internal/ubuntu cosmic/main s390x libstdc++-7-dev s390x 7.3.0-27ubuntu1 [1454 kB] Get:105 http://ftpmaster.internal/ubuntu cosmic/main s390x libgcc-7-dev s390x 7.3.0-27ubuntu1 [642 kB] Get:106 http://ftpmaster.internal/ubuntu cosmic/main s390x cpp-7 s390x 7.3.0-27ubuntu1 [5188 kB] Get:107 http://ftpmaster.internal/ubuntu cosmic/main s390x gcc-7-base s390x 7.3.0-27ubuntu1 [18.9 kB] Get:108 http://ftpmaster.internal/ubuntu cosmic/main s390x e2fslibs s390x 1.44.3-1 [2704 B] Get:109 http://ftpmaster.internal/ubuntu cosmic/main s390x pinentry-curses s390x 1.1.0-1build2 [34.4 kB] Get:110 http://ftpmaster.internal/ubuntu cosmic/main s390x libnpth0 s390x 1.6-1 [7500 B] Get:111 http://ftpmaster.internal/ubuntu cosmic/main s390x gpg s390x 2.2.8-1ubuntu1 [428 kB] Get:112 http://ftpmaster.internal/ubuntu cosmic/main s390x gpgconf s390x 2.2.8-1ubuntu1 [115 kB] Get:113 http://ftpmaster.internal/ubuntu cosmic/main s390x gpg-agent s390x 2.2.8-1ubuntu1 [208 kB] Get:114 http://ftpmaster.internal/ubuntu cosmic/universe s390x libargon2-0 s390x 0~20171227-0.1 [4536 B] Get:115 http://ftpmaster.internal/ubuntu cosmic/main s390x libcomerr2 s390x 1.44.3-1 [2704 B] Get:116 http://ftpmaster.internal/ubuntu cosmic/main s390x libusb-0.1-4 s390x 2:0.1.12-32 [16.5 kB] Get:117 http://ftpmaster.internal/ubuntu cosmic/main s390x linux-libc-dev s390x 4.17.0-6.7 [1005 kB] Get:118 http://ftpmaster.internal/ubuntu cosmic/main s390x pkgbinarymangler all 141 [53.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 69.9 MB in 10s (6684 kB/s) (Reading database ... 12382 files and directories currently installed.) Preparing to unpack .../base-files_10.1ubuntu4_s390x.deb ... Unpacking base-files (10.1ubuntu4) over (10.1ubuntu2) ... Setting up base-files (10.1ubuntu4) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Selecting previously unselected package libtinfo6:s390x. (Reading database ... 12382 files and directories currently installed.) Preparing to unpack .../libtinfo6_6.1+20180210-4ubuntu1_s390x.deb ... Unpacking libtinfo6:s390x (6.1+20180210-4ubuntu1) ... Setting up libtinfo6:s390x (6.1+20180210-4ubuntu1) ... (Reading database ... 12391 files and directories currently installed.) Preparing to unpack .../debianutils_4.8.6_s390x.deb ... Unpacking debianutils (4.8.6) over (4.8.4) ... Setting up debianutils (4.8.6) ... (Reading database ... 12391 files and directories currently installed.) Preparing to unpack .../bash_4.4.18-2ubuntu2_s390x.deb ... Unpacking bash (4.4.18-2ubuntu2) over (4.4.18-2ubuntu1) ... Setting up bash (4.4.18-2ubuntu2) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12391 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.32-0.1ubuntu1_s390x.deb ... Unpacking bsdutils (1:2.32-0.1ubuntu1) over (1:2.31.1-0.4ubuntu3) ... Setting up bsdutils (1:2.32-0.1ubuntu1) ... (Reading database ... 12391 files and directories currently installed.) Preparing to unpack .../tar_1.30+dfsg-2_s390x.deb ... Unpacking tar (1.30+dfsg-2) over (1.29b-2) ... Setting up tar (1.30+dfsg-2) ... (Reading database ... 12391 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.0.5ubuntu3_s390x.deb ... Unpacking dpkg (1.19.0.5ubuntu3) over (1.19.0.5ubuntu2) ... Setting up dpkg (1.19.0.5ubuntu3) ... (Reading database ... 12391 files and directories currently installed.) Preparing to unpack .../libext2fs2_1.44.3-1_s390x.deb ... Unpacking libext2fs2:s390x (1.44.3-1) over (1.44.1-1) ... Setting up libext2fs2:s390x (1.44.3-1) ... (Reading database ... 12391 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.44.3-1_s390x.deb ... Unpacking e2fsprogs (1.44.3-1) over (1.44.1-1) ... Setting up e2fsprogs (1.44.3-1) ... (Reading database ... 12393 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.1+20180210-4ubuntu1_s390x.deb ... Unpacking ncurses-bin (6.1+20180210-4ubuntu1) over (6.1-1ubuntu1) ... Setting up ncurses-bin (6.1+20180210-4ubuntu1) ... (Reading database ... 12393 files and directories currently installed.) Preparing to unpack .../perl_5.26.2-6_s390x.deb ... Unpacking perl (5.26.2-6) over (5.26.1-6) ... Preparing to unpack .../perl-modules-5.26_5.26.2-6_all.deb ... Unpacking perl-modules-5.26 (5.26.2-6) over (5.26.1-6) ... Preparing to unpack .../libperl5.26_5.26.2-6_s390x.deb ... Unpacking libperl5.26:s390x (5.26.2-6) over (5.26.1-6) ... Preparing to unpack .../perl-base_5.26.2-6_s390x.deb ... Unpacking perl-base (5.26.2-6) over (5.26.1-6) ... Setting up perl-base (5.26.2-6) ... (Reading database ... 12393 files and directories currently installed.) Preparing to unpack .../archives/sed_4.5-1_s390x.deb ... Unpacking sed (4.5-1) over (4.4-2) ... Setting up sed (4.5-1) ... (Reading database ... 12393 files and directories currently installed.) Preparing to unpack .../libuuid1_2.32-0.1ubuntu1_s390x.deb ... Unpacking libuuid1:s390x (2.32-0.1ubuntu1) over (2.31.1-0.4ubuntu3) ... Setting up libuuid1:s390x (2.32-0.1ubuntu1) ... (Reading database ... 12393 files and directories currently installed.) Preparing to unpack .../libblkid1_2.32-0.1ubuntu1_s390x.deb ... Unpacking libblkid1:s390x (2.32-0.1ubuntu1) over (2.31.1-0.4ubuntu3) ... Setting up libblkid1:s390x (2.32-0.1ubuntu1) ... (Reading database ... 12393 files and directories currently installed.) Preparing to unpack .../libfdisk1_2.32-0.1ubuntu1_s390x.deb ... Unpacking libfdisk1:s390x (2.32-0.1ubuntu1) over (2.31.1-0.4ubuntu3) ... Setting up libfdisk1:s390x (2.32-0.1ubuntu1) ... Selecting previously unselected package libncursesw6:s390x. (Reading database ... 12393 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.1+20180210-4ubuntu1_s390x.deb ... Unpacking libncursesw6:s390x (6.1+20180210-4ubuntu1) ... Setting up libncursesw6:s390x (6.1+20180210-4ubuntu1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../libpcre3_2%3a8.39-11_s390x.deb ... Unpacking libpcre3:s390x (2:8.39-11) over (2:8.39-9) ... Setting up libpcre3:s390x (2:8.39-11) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../libselinux1_2.8-1build1_s390x.deb ... Unpacking libselinux1:s390x (2.8-1build1) over (2.7-2build2) ... Setting up libselinux1:s390x (2.8-1build1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../libmount1_2.32-0.1ubuntu1_s390x.deb ... Unpacking libmount1:s390x (2.32-0.1ubuntu1) over (2.31.1-0.4ubuntu3) ... Setting up libmount1:s390x (2.32-0.1ubuntu1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.32-0.1ubuntu1_s390x.deb ... Unpacking libsmartcols1:s390x (2.32-0.1ubuntu1) over (2.31.1-0.4ubuntu3) ... Setting up libsmartcols1:s390x (2.32-0.1ubuntu1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../fdisk_2.32-0.1ubuntu1_s390x.deb ... Unpacking fdisk (2.32-0.1ubuntu1) over (2.31.1-0.4ubuntu3) ... Setting up fdisk (2.32-0.1ubuntu1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../util-linux_2.32-0.1ubuntu1_s390x.deb ... Unpacking util-linux (2.32-0.1ubuntu1) over (2.31.1-0.4ubuntu3) ... Setting up util-linux (2.32-0.1ubuntu1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../base-passwd_3.5.45_s390x.deb ... Unpacking base-passwd (3.5.45) over (3.5.44) ... Setting up base-passwd (3.5.45) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.1+20180210-4ubuntu1_all.deb ... Unpacking ncurses-base (6.1+20180210-4ubuntu1) over (6.1-1ubuntu1) ... Setting up ncurses-base (6.1+20180210-4ubuntu1) ... (Reading database ... 12404 files and directories currently installed.) Preparing to unpack .../libgomp1_8.2.0-3ubuntu1_s390x.deb ... Unpacking libgomp1:s390x (8.2.0-3ubuntu1) over (8-20180414-1ubuntu2) ... Preparing to unpack .../libitm1_8.2.0-3ubuntu1_s390x.deb ... Unpacking libitm1:s390x (8.2.0-3ubuntu1) over (8-20180414-1ubuntu2) ... Preparing to unpack .../gcc-8-base_8.2.0-3ubuntu1_s390x.deb ... Unpacking gcc-8-base:s390x (8.2.0-3ubuntu1) over (8-20180414-1ubuntu2) ... Setting up gcc-8-base:s390x (8.2.0-3ubuntu1) ... (Reading database ... 12403 files and directories currently installed.) Preparing to unpack .../libgcc1_1%3a8.2.0-3ubuntu1_s390x.deb ... Unpacking libgcc1:s390x (1:8.2.0-3ubuntu1) over (1:8-20180414-1ubuntu2) ... Setting up libgcc1:s390x (1:8.2.0-3ubuntu1) ... (Reading database ... 12403 files and directories currently installed.) Preparing to unpack .../libcc1-0_8.2.0-3ubuntu1_s390x.deb ... Unpacking libcc1-0:s390x (8.2.0-3ubuntu1) over (8-20180414-1ubuntu2) ... Preparing to unpack .../libatomic1_8.2.0-3ubuntu1_s390x.deb ... Unpacking libatomic1:s390x (8.2.0-3ubuntu1) over (8-20180414-1ubuntu2) ... Preparing to unpack .../libstdc++6_8.2.0-3ubuntu1_s390x.deb ... Unpacking libstdc++6:s390x (8.2.0-3ubuntu1) over (8-20180414-1ubuntu2) ... Setting up libstdc++6:s390x (8.2.0-3ubuntu1) ... (Reading database ... 12403 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.8.2-1ubuntu1_s390x.deb ... Unpacking liblz4-1:s390x (1.8.2-1ubuntu1) over (0.0~r131-2ubuntu3) ... Setting up liblz4-1:s390x (1.8.2-1ubuntu1) ... (Reading database ... 12403 files and directories currently installed.) Preparing to unpack .../libudev1_239-7ubuntu2_s390x.deb ... Unpacking libudev1:s390x (239-7ubuntu2) over (237-3ubuntu10) ... Setting up libudev1:s390x (239-7ubuntu2) ... (Reading database ... 12403 files and directories currently installed.) Preparing to unpack .../libapt-pkg5.0_1.7.0~alpha2_s390x.deb ... Unpacking libapt-pkg5.0:s390x (1.7.0~alpha2) over (1.6.1) ... Setting up libapt-pkg5.0:s390x (1.7.0~alpha2) ... (Reading database ... 12403 files and directories currently installed.) Preparing to unpack .../debconf_1.5.69_all.deb ... Unpacking debconf (1.5.69) over (1.5.66) ... Setting up debconf (1.5.69) ... (Reading database ... 12390 files and directories currently installed.) Preparing to unpack .../adduser_3.117ubuntu1_all.deb ... Unpacking adduser (3.117ubuntu1) over (3.116ubuntu1) ... Setting up adduser (3.117ubuntu1) ... (Reading database ... 12390 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.32-1_s390x.deb ... Unpacking libgpg-error0:s390x (1.32-1) over (1.27-6) ... Setting up libgpg-error0:s390x (1.32-1) ... (Reading database ... 12390 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.8.3-1ubuntu1_s390x.deb ... Unpacking libgcrypt20:s390x (1.8.3-1ubuntu1) over (1.8.1-4ubuntu1) ... Setting up libgcrypt20:s390x (1.8.3-1ubuntu1) ... (Reading database ... 12390 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.8-1ubuntu1_s390x.deb ... Unpacking gpgv (2.2.8-1ubuntu1) over (2.2.4-1ubuntu1) ... Setting up gpgv (2.2.8-1ubuntu1) ... (Reading database ... 12390 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.3.3-3ubuntu1_s390x.deb ... Unpacking libseccomp2:s390x (2.3.3-3ubuntu1) over (2.3.1-2.1ubuntu4) ... Setting up libseccomp2:s390x (2.3.3-3ubuntu1) ... (Reading database ... 12390 files and directories currently installed.) Preparing to unpack .../apt_1.7.0~alpha2_s390x.deb ... Unpacking apt (1.7.0~alpha2) over (1.6.1) ... Setting up apt (1.7.0~alpha2) ... (Reading database ... 12390 files and directories currently installed.) Preparing to unpack .../libapparmor1_2.12-4ubuntu7_s390x.deb ... Unpacking libapparmor1:s390x (2.12-4ubuntu7) over (2.12-4ubuntu5) ... Preparing to unpack .../libaudit-common_1%3a2.8.3-1ubuntu2_all.deb ... Unpacking libaudit-common (1:2.8.3-1ubuntu2) over (1:2.8.2-1ubuntu1) ... Setting up libaudit-common (1:2.8.3-1ubuntu2) ... (Reading database ... 12390 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.7.9-1_s390x.deb ... Unpacking libcap-ng0:s390x (0.7.9-1) over (0.7.7-3.1) ... Setting up libcap-ng0:s390x (0.7.9-1) ... (Reading database ... 12390 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a2.8.3-1ubuntu2_s390x.deb ... Unpacking libaudit1:s390x (1:2.8.3-1ubuntu2) over (1:2.8.2-1ubuntu1) ... Setting up libaudit1:s390x (1:2.8.3-1ubuntu2) ... Selecting previously unselected package libargon2-1:s390x. (Reading database ... 12390 files and directories currently installed.) Preparing to unpack .../0-libargon2-1_0~20171227-0.1_s390x.deb ... Unpacking libargon2-1:s390x (0~20171227-0.1) ... Preparing to unpack .../1-libcryptsetup12_2%3a2.0.3-6ubuntu1_s390x.deb ... Unpacking libcryptsetup12:s390x (2:2.0.3-6ubuntu1) over (2:2.0.2-1ubuntu1) ... Preparing to unpack .../2-libkmod2_25-1ubuntu1_s390x.deb ... Unpacking libkmod2:s390x (25-1ubuntu1) over (24-1ubuntu3) ... Preparing to unpack .../3-mount_2.32-0.1ubuntu1_s390x.deb ... Unpacking mount (2.32-0.1ubuntu1) over (2.31.1-0.4ubuntu3) ... Selecting previously unselected package libncurses6:s390x. Preparing to unpack .../4-libncurses6_6.1+20180210-4ubuntu1_s390x.deb ... Unpacking libncurses6:s390x (6.1+20180210-4ubuntu1) ... Selecting previously unselected package libprocps7:s390x. Preparing to unpack .../5-libprocps7_2%3a3.3.15-2ubuntu1_s390x.deb ... Unpacking libprocps7:s390x (2:3.3.15-2ubuntu1) ... Preparing to unpack .../6-procps_2%3a3.3.15-2ubuntu1_s390x.deb ... Unpacking procps (2:3.3.15-2ubuntu1) over (2:3.3.12-3ubuntu1) ... Setting up libargon2-1:s390x (0~20171227-0.1) ... Setting up libcryptsetup12:s390x (2:2.0.3-6ubuntu1) ... (Reading database ... 12412 files and directories currently installed.) Preparing to unpack .../systemd_239-7ubuntu2_s390x.deb ... Unpacking systemd (239-7ubuntu2) over (237-3ubuntu10) ... Preparing to unpack .../libsystemd0_239-7ubuntu2_s390x.deb ... Unpacking libsystemd0:s390x (239-7ubuntu2) over (237-3ubuntu10) ... Setting up libsystemd0:s390x (239-7ubuntu2) ... Setting up libapparmor1:s390x (2.12-4ubuntu7) ... Setting up libkmod2:s390x (25-1ubuntu1) ... Setting up mount (2.32-0.1ubuntu1) ... Setting up libncurses6:s390x (6.1+20180210-4ubuntu1) ... Setting up libprocps7:s390x (2:3.3.15-2ubuntu1) ... Setting up procps (2:3.3.15-2ubuntu1) ... Installing new version of config file /etc/init.d/procps ... Installing new version of config file /etc/sysctl.conf ... Installing new version of config file /etc/sysctl.d/10-network-security.conf ... Setting up systemd (239-7ubuntu2) ... Installing new version of config file /etc/systemd/journald.conf ... Installing new version of config file /etc/systemd/logind.conf ... Installing new version of config file /etc/systemd/resolved.conf ... Installing new version of config file /etc/systemd/system.conf ... (Reading database ... 12434 files and directories currently installed.) Preparing to unpack .../systemd-sysv_239-7ubuntu2_s390x.deb ... Unpacking systemd-sysv (239-7ubuntu2) over (237-3ubuntu10) ... Preparing to unpack .../libcom-err2_1.44.3-1_s390x.deb ... Unpacking libcom-err2:s390x (1.44.3-1) over (1.44.1-1) ... Setting up libcom-err2:s390x (1.44.3-1) ... (Reading database ... 12434 files and directories currently installed.) Preparing to unpack .../libsepol1_2.8-1_s390x.deb ... Unpacking libsepol1:s390x (2.8-1) over (2.7-1) ... Setting up libsepol1:s390x (2.8-1) ... (Reading database ... 12434 files and directories currently installed.) Preparing to unpack .../libsemanage-common_2.8-1build1_all.deb ... Unpacking libsemanage-common (2.8-1build1) over (2.7-2build2) ... Setting up libsemanage-common (2.8-1build1) ... (Reading database ... 12434 files and directories currently installed.) Preparing to unpack .../libsemanage1_2.8-1build1_s390x.deb ... Unpacking libsemanage1:s390x (2.8-1build1) over (2.7-2build2) ... Setting up libsemanage1:s390x (2.8-1build1) ... (Reading database ... 12434 files and directories currently installed.) Preparing to unpack .../libss2_1.44.3-1_s390x.deb ... Unpacking libss2:s390x (1.44.3-1) over (1.44.1-1) ... Setting up libss2:s390x (1.44.3-1) ... (Reading database ... 12434 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.1.2+dfsg-3_s390x.deb ... Unpacking libgmp10:s390x (2:6.1.2+dfsg-3) over (2:6.1.2+dfsg-2) ... Setting up libgmp10:s390x (2:6.1.2+dfsg-3) ... (Reading database ... 12434 files and directories currently installed.) Preparing to unpack .../libunistring2_0.9.10-1ubuntu1_s390x.deb ... Unpacking libunistring2:s390x (0.9.10-1ubuntu1) over (0.9.9-0ubuntu1) ... Setting up libunistring2:s390x (0.9.10-1ubuntu1) ... (Reading database ... 12434 files and directories currently installed.) Preparing to unpack .../libidn2-0_2.0.4-2.2_s390x.deb ... Unpacking libidn2-0:s390x (2.0.4-2.2) over (2.0.4-1.1build2) ... Setting up libidn2-0:s390x (2.0.4-2.2) ... (Reading database ... 12434 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.23.12-2_s390x.deb ... Unpacking libp11-kit0:s390x (0.23.12-2) over (0.23.9-2) ... Setting up libp11-kit0:s390x (0.23.12-2) ... (Reading database ... 12434 files and directories currently installed.) Preparing to unpack .../libtasn1-6_4.13-3_s390x.deb ... Unpacking libtasn1-6:s390x (4.13-3) over (4.13-2) ... Setting up libtasn1-6:s390x (4.13-3) ... (Reading database ... 12434 files and directories currently installed.) Preparing to unpack .../libncurses5_6.1+20180210-4ubuntu1_s390x.deb ... Unpacking libncurses5:s390x (6.1+20180210-4ubuntu1) over (6.1-1ubuntu1) ... Preparing to unpack .../libncursesw5_6.1+20180210-4ubuntu1_s390x.deb ... Unpacking libncursesw5:s390x (6.1+20180210-4ubuntu1) over (6.1-1ubuntu1) ... Preparing to unpack .../libtinfo5_6.1+20180210-4ubuntu1_s390x.deb ... Unpacking libtinfo5:s390x (6.1+20180210-4ubuntu1) over (6.1-1ubuntu1) ... Setting up libtinfo5:s390x (6.1+20180210-4ubuntu1) ... (Reading database ... 12432 files and directories currently installed.) Preparing to unpack .../00-libidn11_1.33-2.2ubuntu1_s390x.deb ... Unpacking libidn11:s390x (1.33-2.2ubuntu1) over (1.33-2.1ubuntu1) ... Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) over (7.0-3) ... Preparing to unpack .../02-libreadline7_7.0-5_s390x.deb ... Unpacking libreadline7:s390x (7.0-5) over (7.0-3) ... Preparing to unpack .../03-libslang2_2.3.2-1ubuntu1_s390x.deb ... Unpacking libslang2:s390x (2.3.2-1ubuntu1) over (2.3.1a-3ubuntu1) ... Preparing to unpack .../04-libsqlite3-0_3.24.0-1_s390x.deb ... Unpacking libsqlite3-0:s390x (3.24.0-1) over (3.22.0-1) ... Preparing to unpack .../05-libssl1.1_1.1.0g-2ubuntu5_s390x.deb ... Unpacking libssl1.1:s390x (1.1.0g-2ubuntu5) over (1.1.0g-2ubuntu4) ... Preparing to unpack .../06-openssl_1.1.0g-2ubuntu5_s390x.deb ... Unpacking openssl (1.1.0g-2ubuntu5) over (1.1.0g-2ubuntu4) ... Preparing to unpack .../07-tzdata_2018e-1_all.deb ... Unpacking tzdata (2018e-1) over (2018d-1) ... Preparing to unpack .../08-libpng16-16_1.6.34-2_s390x.deb ... Unpacking libpng16-16:s390x (1.6.34-2) over (1.6.34-1) ... Preparing to unpack .../09-libbinutils_2.31.1-2ubuntu1_s390x.deb ... Unpacking libbinutils:s390x (2.31.1-2ubuntu1) over (2.30-15ubuntu1) ... Preparing to unpack .../10-binutils-common_2.31.1-2ubuntu1_s390x.deb ... Unpacking binutils-common:s390x (2.31.1-2ubuntu1) over (2.30-15ubuntu1) ... Preparing to unpack .../11-binutils_2.31.1-2ubuntu1_s390x.deb ... Unpacking binutils (2.31.1-2ubuntu1) over (2.30-15ubuntu1) ... Preparing to unpack .../12-binutils-s390x-linux-gnu_2.31.1-2ubuntu1_s390x.deb ... Unpacking binutils-s390x-linux-gnu (2.31.1-2ubuntu1) over (2.30-15ubuntu1) ... Preparing to unpack .../13-libisl19_0.20-1_s390x.deb ... Unpacking libisl19:s390x (0.20-1) over (0.19-1) ... Selecting previously unselected package cpp-8. Preparing to unpack .../14-cpp-8_8.2.0-3ubuntu1_s390x.deb ... Unpacking cpp-8 (8.2.0-3ubuntu1) ... Preparing to unpack .../15-cpp_4%3a8.1.0-2ubuntu1_s390x.deb ... Unpacking cpp (4:8.1.0-2ubuntu1) over (4:7.3.0-3ubuntu2) ... Selecting previously unselected package libasan5:s390x. Preparing to unpack .../16-libasan5_8.2.0-3ubuntu1_s390x.deb ... Unpacking libasan5:s390x (8.2.0-3ubuntu1) ... Selecting previously unselected package libubsan1:s390x. Preparing to unpack .../17-libubsan1_8.2.0-3ubuntu1_s390x.deb ... Unpacking libubsan1:s390x (8.2.0-3ubuntu1) ... Selecting previously unselected package libgcc-8-dev:s390x. Preparing to unpack .../18-libgcc-8-dev_8.2.0-3ubuntu1_s390x.deb ... Unpacking libgcc-8-dev:s390x (8.2.0-3ubuntu1) ... Selecting previously unselected package gcc-8. Preparing to unpack .../19-gcc-8_8.2.0-3ubuntu1_s390x.deb ... Unpacking gcc-8 (8.2.0-3ubuntu1) ... Preparing to unpack .../20-gcc_4%3a8.1.0-2ubuntu1_s390x.deb ... Unpacking gcc (4:8.1.0-2ubuntu1) over (4:7.3.0-3ubuntu2) ... Selecting previously unselected package libstdc++-8-dev:s390x. Preparing to unpack .../21-libstdc++-8-dev_8.2.0-3ubuntu1_s390x.deb ... Unpacking libstdc++-8-dev:s390x (8.2.0-3ubuntu1) ... Selecting previously unselected package g++-8. Preparing to unpack .../22-g++-8_8.2.0-3ubuntu1_s390x.deb ... Unpacking g++-8 (8.2.0-3ubuntu1) ... Preparing to unpack .../23-g++_4%3a8.1.0-2ubuntu1_s390x.deb ... Unpacking g++ (4:8.1.0-2ubuntu1) over (4:7.3.0-3ubuntu2) ... Preparing to unpack .../24-make_4.2.1-1.1_s390x.deb ... Unpacking make (4.2.1-1.1) over (4.1-9.1ubuntu1) ... Preparing to unpack .../25-dpkg-dev_1.19.0.5ubuntu3_all.deb ... Unpacking dpkg-dev (1.19.0.5ubuntu3) over (1.19.0.5ubuntu2) ... Preparing to unpack .../26-libdpkg-perl_1.19.0.5ubuntu3_all.deb ... Unpacking libdpkg-perl (1.19.0.5ubuntu3) over (1.19.0.5ubuntu2) ... Preparing to unpack .../27-build-essential_12.5ubuntu2_s390x.deb ... Unpacking build-essential (12.5ubuntu2) over (12.4ubuntu1) ... Preparing to unpack .../28-libasan4_7.3.0-27ubuntu1_s390x.deb ... Unpacking libasan4:s390x (7.3.0-27ubuntu1) over (7.3.0-16ubuntu3) ... Preparing to unpack .../29-libubsan0_7.3.0-27ubuntu1_s390x.deb ... Unpacking libubsan0:s390x (7.3.0-27ubuntu1) over (7.3.0-16ubuntu3) ... Preparing to unpack .../30-g++-7_7.3.0-27ubuntu1_s390x.deb ... Unpacking g++-7 (7.3.0-27ubuntu1) over (7.3.0-16ubuntu3) ... Preparing to unpack .../31-gcc-7_7.3.0-27ubuntu1_s390x.deb ... Unpacking gcc-7 (7.3.0-27ubuntu1) over (7.3.0-16ubuntu3) ... Preparing to unpack .../32-libstdc++-7-dev_7.3.0-27ubuntu1_s390x.deb ... Unpacking libstdc++-7-dev:s390x (7.3.0-27ubuntu1) over (7.3.0-16ubuntu3) ... Preparing to unpack .../33-libgcc-7-dev_7.3.0-27ubuntu1_s390x.deb ... Unpacking libgcc-7-dev:s390x (7.3.0-27ubuntu1) over (7.3.0-16ubuntu3) ... Preparing to unpack .../34-cpp-7_7.3.0-27ubuntu1_s390x.deb ... Unpacking cpp-7 (7.3.0-27ubuntu1) over (7.3.0-16ubuntu3) ... Preparing to unpack .../35-gcc-7-base_7.3.0-27ubuntu1_s390x.deb ... Unpacking gcc-7-base:s390x (7.3.0-27ubuntu1) over (7.3.0-16ubuntu3) ... Preparing to unpack .../36-e2fslibs_1.44.3-1_s390x.deb ... Unpacking e2fslibs:s390x (1.44.3-1) over (1.44.1-1) ... Preparing to unpack .../37-pinentry-curses_1.1.0-1build2_s390x.deb ... Unpacking pinentry-curses (1.1.0-1build2) over (1.1.0-1) ... Preparing to unpack .../38-libnpth0_1.6-1_s390x.deb ... Unpacking libnpth0:s390x (1.6-1) over (1.5-3) ... Preparing to unpack .../39-gpg_2.2.8-1ubuntu1_s390x.deb ... Unpacking gpg (2.2.8-1ubuntu1) over (2.2.4-1ubuntu1) ... Preparing to unpack .../40-gpgconf_2.2.8-1ubuntu1_s390x.deb ... Unpacking gpgconf (2.2.8-1ubuntu1) over (2.2.4-1ubuntu1) ... Preparing to unpack .../41-gpg-agent_2.2.8-1ubuntu1_s390x.deb ... Unpacking gpg-agent (2.2.8-1ubuntu1) over (2.2.4-1ubuntu1) ... Preparing to unpack .../42-libargon2-0_0~20171227-0.1_s390x.deb ... Unpacking libargon2-0 (0~20171227-0.1) over (0~20161029-1.1) ... Preparing to unpack .../43-libcomerr2_1.44.3-1_s390x.deb ... Unpacking libcomerr2:s390x (1.44.3-1) over (1.44.1-1) ... Preparing to unpack .../44-libusb-0.1-4_2%3a0.1.12-32_s390x.deb ... Unpacking libusb-0.1-4:s390x (2:0.1.12-32) over (2:0.1.12-31) ... Preparing to unpack .../45-linux-libc-dev_4.17.0-6.7_s390x.deb ... Unpacking linux-libc-dev:s390x (4.17.0-6.7) over (4.15.0-20.21) ... Preparing to unpack .../46-pkgbinarymangler_141_all.deb ... Unpacking pkgbinarymangler (141) over (138) ... Setting up libnpth0:s390x (1.6-1) ... Setting up libncurses5:s390x (6.1+20180210-4ubuntu1) ... Setting up libgomp1:s390x (8.2.0-3ubuntu1) ... Setting up libatomic1:s390x (8.2.0-3ubuntu1) ... Setting up readline-common (7.0-5) ... Setting up libcc1-0:s390x (8.2.0-3ubuntu1) ... Setting up make (4.2.1-1.1) ... Setting up pkgbinarymangler (141) ... Setting up e2fslibs:s390x (1.44.3-1) ... Setting up libpng16-16:s390x (1.6.34-2) ... Setting up libncursesw5:s390x (6.1+20180210-4ubuntu1) ... Setting up libreadline7:s390x (7.0-5) ... Setting up tzdata (2018e-1) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Aug 3 23:10:01 UTC 2018. Universal Time is now: Fri Aug 3 23:10:01 UTC 2018. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up systemd-sysv (239-7ubuntu2) ... Setting up gpgconf (2.2.8-1ubuntu1) ... Setting up linux-libc-dev:s390x (4.17.0-6.7) ... Setting up perl-modules-5.26 (5.26.2-6) ... Setting up libargon2-0 (0~20171227-0.1) ... Setting up gcc-7-base:s390x (7.3.0-27ubuntu1) ... Setting up binutils-common:s390x (2.31.1-2ubuntu1) ... Processing triggers for libc-bin (2.27-3ubuntu1) ... Setting up libperl5.26:s390x (5.26.2-6) ... Setting up libssl1.1:s390x (1.1.0g-2ubuntu5) ... Setting up openssl (1.1.0g-2ubuntu5) ... Setting up libsqlite3-0:s390x (3.24.0-1) ... Setting up pinentry-curses (1.1.0-1build2) ... Setting up libcomerr2:s390x (1.44.3-1) ... Setting up libslang2:s390x (2.3.2-1ubuntu1) ... Setting up libasan5:s390x (8.2.0-3ubuntu1) ... Setting up libusb-0.1-4:s390x (2:0.1.12-32) ... Setting up libitm1:s390x (8.2.0-3ubuntu1) ... Setting up libidn11:s390x (1.33-2.2ubuntu1) ... Setting up gpg (2.2.8-1ubuntu1) ... Setting up libubsan1:s390x (8.2.0-3ubuntu1) ... Setting up libisl19:s390x (0.20-1) ... Setting up cpp-8 (8.2.0-3ubuntu1) ... Setting up cpp (4:8.1.0-2ubuntu1) ... Setting up libasan4:s390x (7.3.0-27ubuntu1) ... Setting up libbinutils:s390x (2.31.1-2ubuntu1) ... Setting up libubsan0:s390x (7.3.0-27ubuntu1) ... Setting up binutils-s390x-linux-gnu (2.31.1-2ubuntu1) ... Setting up gpg-agent (2.2.8-1ubuntu1) ... Setting up libgcc-7-dev:s390x (7.3.0-27ubuntu1) ... Setting up cpp-7 (7.3.0-27ubuntu1) ... Setting up libstdc++-7-dev:s390x (7.3.0-27ubuntu1) ... Setting up perl (5.26.2-6) ... Setting up libgcc-8-dev:s390x (8.2.0-3ubuntu1) ... Setting up binutils (2.31.1-2ubuntu1) ... Setting up libstdc++-8-dev:s390x (8.2.0-3ubuntu1) ... Setting up gcc-7 (7.3.0-27ubuntu1) ... Setting up g++-7 (7.3.0-27ubuntu1) ... Setting up libdpkg-perl (1.19.0.5ubuntu3) ... Setting up gcc-8 (8.2.0-3ubuntu1) ... Setting up g++-8 (8.2.0-3ubuntu1) ... Setting up dpkg-dev (1.19.0.5ubuntu3) ... Setting up gcc (4:8.1.0-2ubuntu1) ... Setting up g++ (4:8.1.0-2ubuntu1) ... Setting up build-essential (12.5ubuntu2) ... Processing triggers for libc-bin (2.27-3ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-15229042 s390x cosmic-proposed -c chroot:build-PACKAGEBUILD-15229042 --arch=s390x --dist=cosmic-proposed --nolog vcftools_0.1.16-1.dsc Initiating build PACKAGEBUILD-15229042 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-131-generic #157-Ubuntu SMP Thu Jul 12 15:44:42 UTC 2018 s390x sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-s390x-012.buildd +==============================================================================+ | vcftools 0.1.16-1 (s390x) 03 Aug 2018 23:10 | +==============================================================================+ Package: vcftools Version: 0.1.16-1 Source Version: 0.1.16-1 Distribution: cosmic-proposed Machine Architecture: s390x Host Architecture: s390x Build Architecture: s390x I: NOTICE: Log filtering will replace 'build/vcftools-CODQeE/vcftools-0.1.16' with '<>' I: NOTICE: Log filtering will replace 'build/vcftools-CODQeE' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-15229042/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- vcftools_0.1.16-1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-jmF0LP/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-jmF0LP/apt_archive ./ InRelease Get:2 copy:/<>/resolver-jmF0LP/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-jmF0LP/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-jmF0LP/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-jmF0LP/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-7 libargon2-0 libprocps6 libstdc++-7-dev Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-jmF0LP/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 13387 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11), pkg-config, zlib1g-dev Filtered Build-Depends: debhelper (>= 11), pkg-config, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-vcftools-dummy' in '/<>/resolver-O3rVV1/apt_archive/sbuild-build-depends-vcftools-dummy.deb'. Ign:1 copy:/<>/resolver-O3rVV1/apt_archive ./ InRelease Get:2 copy:/<>/resolver-O3rVV1/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-O3rVV1/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-O3rVV1/apt_archive ./ Sources [227 B] Get:5 copy:/<>/resolver-O3rVV1/apt_archive ./ Packages [546 B] Fetched 2892 B in 213503982334601d 7h 0min 15s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install vcftools build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-7 libargon2-0 libprocps6 libstdc++-7-dev Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu60 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libxml2 m4 man-db pkg-config po-debconf zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu60 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libxml2 m4 man-db pkg-config po-debconf sbuild-build-depends-vcftools-dummy zlib1g-dev 0 upgraded, 34 newly installed, 0 to remove and 0 not upgraded. Need to get 16.5 MB of archives. After this operation, 64.8 MB of additional disk space will be used. Get:1 copy:/<>/resolver-O3rVV1/apt_archive ./ sbuild-build-depends-vcftools-dummy 0.invalid.0 [868 B] Get:2 http://ftpmaster.internal/ubuntu cosmic/main s390x libbsd0 s390x 0.9.1-1 [43.1 kB] Get:3 http://ftpmaster.internal/ubuntu cosmic/main s390x bsdmainutils s390x 11.1.2ubuntu2 [181 kB] Get:4 http://ftpmaster.internal/ubuntu cosmic/main s390x groff-base s390x 1.22.3-10 [1174 kB] Get:5 http://ftpmaster.internal/ubuntu cosmic/main s390x libpipeline1 s390x 1.5.0-1 [24.1 kB] Get:6 http://ftpmaster.internal/ubuntu cosmic/main s390x man-db s390x 2.8.4-2 [1017 kB] Get:7 http://ftpmaster.internal/ubuntu cosmic/main s390x libmagic-mgc s390x 1:5.33-3 [193 kB] Get:8 http://ftpmaster.internal/ubuntu cosmic/main s390x libmagic1 s390x 1:5.33-3 [68.2 kB] Get:9 http://ftpmaster.internal/ubuntu cosmic/main s390x file s390x 1:5.33-3 [22.7 kB] Get:10 http://ftpmaster.internal/ubuntu cosmic/main s390x libelf1 s390x 0.170-0.5 [42.6 kB] Get:11 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libglib2.0-0 s390x 2.57.2-1 [1080 kB] Get:12 http://ftpmaster.internal/ubuntu cosmic/main s390x libicu60 s390x 60.2-6ubuntu1 [7837 kB] Get:13 http://ftpmaster.internal/ubuntu cosmic-proposed/main s390x libxml2 s390x 2.9.4+dfsg1-7build1 [588 kB] Get:14 http://ftpmaster.internal/ubuntu cosmic/main s390x gettext-base s390x 0.19.8.1-6build1 [48.2 kB] Get:15 http://ftpmaster.internal/ubuntu cosmic/main s390x libsigsegv2 s390x 2.12-2 [13.8 kB] Get:16 http://ftpmaster.internal/ubuntu cosmic/main s390x m4 s390x 1.4.18-1 [195 kB] Get:17 http://ftpmaster.internal/ubuntu cosmic/main s390x autoconf all 2.69-11 [322 kB] Get:18 http://ftpmaster.internal/ubuntu cosmic/main s390x autotools-dev all 20180224.1 [39.6 kB] Get:19 http://ftpmaster.internal/ubuntu cosmic/main s390x automake all 1:1.15.1-3ubuntu2 [509 kB] Get:20 http://ftpmaster.internal/ubuntu cosmic/main s390x autopoint all 0.19.8.1-6build1 [412 kB] Get:21 http://ftpmaster.internal/ubuntu cosmic/main s390x libtool all 2.4.6-2.1build1 [196 kB] Get:22 http://ftpmaster.internal/ubuntu cosmic/main s390x dh-autoreconf all 19 [16.1 kB] Get:23 http://ftpmaster.internal/ubuntu cosmic/main s390x libarchive-zip-perl all 1.60-1ubuntu1 [84.6 kB] Get:24 http://ftpmaster.internal/ubuntu cosmic/main s390x libfile-stripnondeterminism-perl all 0.042-1 [15.2 kB] Get:25 http://ftpmaster.internal/ubuntu cosmic/main s390x libtimedate-perl all 2.3000-2 [37.5 kB] Get:26 http://ftpmaster.internal/ubuntu cosmic/main s390x dh-strip-nondeterminism all 0.042-1 [5188 B] Get:27 http://ftpmaster.internal/ubuntu cosmic/main s390x dwz s390x 0.12-2 [73.2 kB] Get:28 http://ftpmaster.internal/ubuntu cosmic/main s390x libcroco3 s390x 0.6.12-2 [74.2 kB] Get:29 http://ftpmaster.internal/ubuntu cosmic/main s390x gettext s390x 0.19.8.1-6build1 [858 kB] Get:30 http://ftpmaster.internal/ubuntu cosmic/main s390x intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:31 http://ftpmaster.internal/ubuntu cosmic/main s390x po-debconf all 1.0.20 [232 kB] Get:32 http://ftpmaster.internal/ubuntu cosmic/main s390x debhelper all 11.3.2ubuntu1 [883 kB] Get:33 http://ftpmaster.internal/ubuntu cosmic/main s390x pkg-config s390x 0.29.1-0ubuntu2 [44.0 kB] Get:34 http://ftpmaster.internal/ubuntu cosmic/main s390x zlib1g-dev s390x 1:1.2.11.dfsg-0ubuntu2 [173 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 16.5 MB in 0s (62.4 MB/s) Selecting previously unselected package libbsd0:s390x. (Reading database ... 13387 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-1_s390x.deb ... Unpacking libbsd0:s390x (0.9.1-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2ubuntu2_s390x.deb ... Unpacking bsdmainutils (11.1.2ubuntu2) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.3-10_s390x.deb ... Unpacking groff-base (1.22.3-10) ... Selecting previously unselected package libpipeline1:s390x. Preparing to unpack .../03-libpipeline1_1.5.0-1_s390x.deb ... Unpacking libpipeline1:s390x (1.5.0-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.8.4-2_s390x.deb ... Unpacking man-db (2.8.4-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../05-libmagic-mgc_1%3a5.33-3_s390x.deb ... Unpacking libmagic-mgc (1:5.33-3) ... Selecting previously unselected package libmagic1:s390x. Preparing to unpack .../06-libmagic1_1%3a5.33-3_s390x.deb ... Unpacking libmagic1:s390x (1:5.33-3) ... Selecting previously unselected package file. Preparing to unpack .../07-file_1%3a5.33-3_s390x.deb ... Unpacking file (1:5.33-3) ... Selecting previously unselected package libelf1:s390x. Preparing to unpack .../08-libelf1_0.170-0.5_s390x.deb ... Unpacking libelf1:s390x (0.170-0.5) ... Selecting previously unselected package libglib2.0-0:s390x. Preparing to unpack .../09-libglib2.0-0_2.57.2-1_s390x.deb ... Unpacking libglib2.0-0:s390x (2.57.2-1) ... Selecting previously unselected package libicu60:s390x. Preparing to unpack .../10-libicu60_60.2-6ubuntu1_s390x.deb ... Unpacking libicu60:s390x (60.2-6ubuntu1) ... Selecting previously unselected package libxml2:s390x. Preparing to unpack .../11-libxml2_2.9.4+dfsg1-7build1_s390x.deb ... Unpacking libxml2:s390x (2.9.4+dfsg1-7build1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../12-gettext-base_0.19.8.1-6build1_s390x.deb ... Unpacking gettext-base (0.19.8.1-6build1) ... Selecting previously unselected package libsigsegv2:s390x. Preparing to unpack .../13-libsigsegv2_2.12-2_s390x.deb ... Unpacking libsigsegv2:s390x (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../14-m4_1.4.18-1_s390x.deb ... Unpacking m4 (1.4.18-1) ... Selecting previously unselected package autoconf. Preparing to unpack .../15-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../16-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../17-automake_1%3a1.15.1-3ubuntu2_all.deb ... Unpacking automake (1:1.15.1-3ubuntu2) ... Selecting previously unselected package autopoint. Preparing to unpack .../18-autopoint_0.19.8.1-6build1_all.deb ... Unpacking autopoint (0.19.8.1-6build1) ... Selecting previously unselected package libtool. Preparing to unpack .../19-libtool_2.4.6-2.1build1_all.deb ... Unpacking libtool (2.4.6-2.1build1) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../20-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../21-libarchive-zip-perl_1.60-1ubuntu1_all.deb ... Unpacking libarchive-zip-perl (1.60-1ubuntu1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../22-libfile-stripnondeterminism-perl_0.042-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (0.042-1) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../23-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../24-dh-strip-nondeterminism_0.042-1_all.deb ... Unpacking dh-strip-nondeterminism (0.042-1) ... Selecting previously unselected package dwz. Preparing to unpack .../25-dwz_0.12-2_s390x.deb ... Unpacking dwz (0.12-2) ... Selecting previously unselected package libcroco3:s390x. Preparing to unpack .../26-libcroco3_0.6.12-2_s390x.deb ... Unpacking libcroco3:s390x (0.6.12-2) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.19.8.1-6build1_s390x.deb ... Unpacking gettext (0.19.8.1-6build1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../28-intltool-debian_0.35.0+20060710.4_all.deb ... Unpacking intltool-debian (0.35.0+20060710.4) ... Selecting previously unselected package po-debconf. Preparing to unpack .../29-po-debconf_1.0.20_all.deb ... Unpacking po-debconf (1.0.20) ... Selecting previously unselected package debhelper. Preparing to unpack .../30-debhelper_11.3.2ubuntu1_all.deb ... Unpacking debhelper (11.3.2ubuntu1) ... Selecting previously unselected package pkg-config. Preparing to unpack .../31-pkg-config_0.29.1-0ubuntu2_s390x.deb ... Unpacking pkg-config (0.29.1-0ubuntu2) ... Selecting previously unselected package zlib1g-dev:s390x. Preparing to unpack .../32-zlib1g-dev_1%3a1.2.11.dfsg-0ubuntu2_s390x.deb ... Unpacking zlib1g-dev:s390x (1:1.2.11.dfsg-0ubuntu2) ... Selecting previously unselected package sbuild-build-depends-vcftools-dummy. Preparing to unpack .../33-sbuild-build-depends-vcftools-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-vcftools-dummy (0.invalid.0) ... Setting up libicu60:s390x (60.2-6ubuntu1) ... Setting up libarchive-zip-perl (1.60-1ubuntu1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsigsegv2:s390x (2.12-2) ... Setting up libelf1:s390x (0.170-0.5) ... Setting up groff-base (1.22.3-10) ... Setting up libglib2.0-0:s390x (2.57.2-1) ... No schema files found: doing nothing. Setting up gettext-base (0.19.8.1-6build1) ... Setting up libpipeline1:s390x (1.5.0-1) ... Setting up m4 (1.4.18-1) ... Setting up libbsd0:s390x (0.9.1-1) ... Setting up libxml2:s390x (2.9.4+dfsg1-7build1) ... Setting up libmagic-mgc (1:5.33-3) ... Setting up libmagic1:s390x (1:5.33-3) ... Setting up libcroco3:s390x (0.6.12-2) ... Setting up pkg-config (0.29.1-0ubuntu2) ... Processing triggers for libc-bin (2.27-3ubuntu1) ... Setting up dwz (0.12-2) ... Setting up autotools-dev (20180224.1) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autopoint (0.19.8.1-6build1) ... Setting up zlib1g-dev:s390x (1:1.2.11.dfsg-0ubuntu2) ... Setting up libfile-stripnondeterminism-perl (0.042-1) ... Setting up gettext (0.19.8.1-6build1) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.33-3) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.15.1-3ubuntu2) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.8.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libtool (2.4.6-2.1build1) ... Setting up po-debconf (1.0.20) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (0.042-1) ... Setting up debhelper (11.3.2ubuntu1) ... Setting up sbuild-build-depends-vcftools-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.27-3ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-131-generic s390x (s390x) Toolchain package versions: binutils_2.31.1-2ubuntu1 dpkg-dev_1.19.0.5ubuntu3 g++-7_7.3.0-27ubuntu1 g++-8_8.2.0-3ubuntu1 gcc-7_7.3.0-27ubuntu1 gcc-8_8.2.0-3ubuntu1 libc6-dev_2.27-3ubuntu1 libstdc++-7-dev_7.3.0-27ubuntu1 libstdc++-8-dev_8.2.0-3ubuntu1 libstdc++6_8.2.0-3ubuntu1 linux-libc-dev_4.17.0-6.7 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.7.0~alpha2 autoconf_2.69-11 automake_1:1.15.1-3ubuntu2 autopoint_0.19.8.1-6build1 autotools-dev_20180224.1 base-files_10.1ubuntu4 base-passwd_3.5.45 bash_4.4.18-2ubuntu2 binutils_2.31.1-2ubuntu1 binutils-common_2.31.1-2ubuntu1 binutils-s390x-linux-gnu_2.31.1-2ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.32-0.1ubuntu1 build-essential_12.5ubuntu2 bzip2_1.0.6-8.1 ca-certificates_20180409 coreutils_8.28-1ubuntu1 cpp_4:8.1.0-2ubuntu1 cpp-7_7.3.0-27ubuntu1 cpp-8_8.2.0-3ubuntu1 dash_0.5.8-2.10 debconf_1.5.69 debhelper_11.3.2ubuntu1 debianutils_4.8.6 dh-autoreconf_19 dh-strip-nondeterminism_0.042-1 diffutils_1:3.6-1 dmsetup_2:1.02.145-4.1ubuntu3 dpkg_1.19.0.5ubuntu3 dpkg-dev_1.19.0.5ubuntu3 dwz_0.12-2 e2fslibs_1.44.3-1 e2fsprogs_1.44.3-1 fakeroot_1.22-2ubuntu1 fdisk_2.32-0.1ubuntu1 file_1:5.33-3 findutils_4.6.0+git+20170828-2 g++_4:8.1.0-2ubuntu1 g++-7_7.3.0-27ubuntu1 g++-8_8.2.0-3ubuntu1 gcc_4:8.1.0-2ubuntu1 gcc-7_7.3.0-27ubuntu1 gcc-7-base_7.3.0-27ubuntu1 gcc-8_8.2.0-3ubuntu1 gcc-8-base_8.2.0-3ubuntu1 gettext_0.19.8.1-6build1 gettext-base_0.19.8.1-6build1 gpg_2.2.8-1ubuntu1 gpg-agent_2.2.8-1ubuntu1 gpgconf_2.2.8-1ubuntu1 gpgv_2.2.8-1ubuntu1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5ubuntu1 hostname_3.20 init_1.51 init-system-helpers_1.51 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.12-4ubuntu7 libapt-pkg5.0_1.7.0~alpha2 libarchive-zip-perl_1.60-1ubuntu1 libargon2-0_0~20171227-0.1 libargon2-1_0~20171227-0.1 libasan4_7.3.0-27ubuntu1 libasan5_8.2.0-3ubuntu1 libassuan0_2.5.1-2 libatomic1_8.2.0-3ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.8.3-1ubuntu2 libaudit1_1:2.8.3-1ubuntu2 libbinutils_2.31.1-2ubuntu1 libblkid1_2.32-0.1ubuntu1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3ubuntu1 libc-dev-bin_2.27-3ubuntu1 libc6_2.27-3ubuntu1 libc6-dev_2.27-3ubuntu1 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-3ubuntu1 libcom-err2_1.44.3-1 libcomerr2_1.44.3-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.3-6ubuntu1 libdb5.3_5.3.28-13.1ubuntu1 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu3 libdpkg-perl_1.19.0.5ubuntu3 libelf1_0.170-0.5 libext2fs2_1.44.3-1 libfakeroot_1.22-2ubuntu1 libfdisk1_2.32-0.1ubuntu1 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.042-1 libgcc-7-dev_7.3.0-27ubuntu1 libgcc-8-dev_8.2.0-3ubuntu1 libgcc1_1:8.2.0-3ubuntu1 libgcrypt20_1.8.3-1ubuntu1 libgdbm-compat4_1.14.1-6 libgdbm5_1.14.1-6 libglib2.0-0_2.57.2-1 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1ubuntu1 libgomp1_8.2.0-3ubuntu1 libgpg-error0_1.32-1 libhogweed4_3.4-1 libicu60_60.2-6ubuntu1 libidn11_1.33-2.2ubuntu1 libidn2-0_2.0.4-2.2 libip4tc0_1.6.1-2ubuntu2 libisl19_0.20-1 libitm1_8.2.0-3ubuntu1 libjson-c3_0.12.1-1.3 libkmod2_25-1ubuntu1 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 liblz4-1_1.8.2-1ubuntu1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.33-3 libmagic1_1:5.33-3 libmount1_2.32-0.1ubuntu1 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1+20180210-4ubuntu1 libncurses6_6.1+20180210-4ubuntu1 libncursesw5_6.1+20180210-4ubuntu1 libncursesw6_6.1+20180210-4ubuntu1 libnettle6_3.4-1 libnpth0_1.6-1 libp11-kit0_0.23.12-2 libpam-modules_1.1.8-3.6ubuntu2 libpam-modules-bin_1.1.8-3.6ubuntu2 libpam-runtime_1.1.8-3.6ubuntu2 libpam0g_1.1.8-3.6ubuntu2 libpcre3_2:8.39-11 libperl5.26_5.26.2-6 libpipeline1_1.5.0-1 libpng16-16_1.6.34-2 libprocps6_2:3.3.12-3ubuntu1 libprocps7_2:3.3.15-2ubuntu1 libreadline7_7.0-5 libseccomp2_2.3.3-3ubuntu1 libselinux1_2.8-1build1 libsemanage-common_2.8-1build1 libsemanage1_2.8-1build1 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1ubuntu1 libsmartcols1_2.32-0.1ubuntu1 libsqlite3-0_3.24.0-1 libss2_1.44.3-1 libssl1.1_1.1.0g-2ubuntu5 libstdc++-7-dev_7.3.0-27ubuntu1 libstdc++-8-dev_8.2.0-3ubuntu1 libstdc++6_8.2.0-3ubuntu1 libsystemd0_239-7ubuntu2 libtasn1-6_4.13-3 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180210-4ubuntu1 libtinfo6_6.1+20180210-4ubuntu1 libtool_2.4.6-2.1build1 libubsan0_7.3.0-27ubuntu1 libubsan1_8.2.0-3ubuntu1 libudev1_239-7ubuntu2 libunistring2_0.9.10-1ubuntu1 libusb-0.1-4_2:0.1.12-32 libustr-1.0-1_1.0.4-6 libuuid1_2.32-0.1ubuntu1 libxml2_2.9.4+dfsg1-7build1 libzstd1_1.3.3+dfsg-2ubuntu1 linux-libc-dev_4.17.0-6.7 lockfile-progs_0.1.17build1 login_1:4.5-1ubuntu1 lsb-base_9.20170808ubuntu1 m4_1.4.18-1 make_4.2.1-1.1 man-db_2.8.4-2 mawk_1.3.3-17ubuntu3 mount_2.32-0.1ubuntu1 multiarch-support_2.27-3ubuntu1 ncurses-base_6.1+20180210-4ubuntu1 ncurses-bin_6.1+20180210-4ubuntu1 openssl_1.1.0g-2ubuntu5 optipng_0.7.6-1.1 passwd_1:4.5-1ubuntu1 patch_2.7.6-2ubuntu1 perl_5.26.2-6 perl-base_5.26.2-6 perl-modules-5.26_5.26.2-6 pinentry-curses_1.1.0-1build2 pkg-config_0.29.1-0ubuntu2 pkgbinarymangler_141 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu1 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-vcftools-dummy_0.invalid.0 sed_4.5-1 sensible-utils_0.0.12 systemd_239-7ubuntu2 systemd-sysv_239-7ubuntu2 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu1 tar_1.30+dfsg-2 tzdata_2018e-1 ubuntu-keyring_2018.02.28 util-linux_2.32-0.1ubuntu1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 zlib1g-dev_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Fri Aug 3 14:41:27 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./vcftools_0.1.16-1.dsc dpkg-source: info: extracting vcftools in vcftools-0.1.16 dpkg-source: info: unpacking vcftools_0.1.16.orig.tar.gz dpkg-source: info: unpacking vcftools_0.1.16-1.debian.tar.xz dpkg-source: info: applying temporary_test_fix.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying manpage.patch dpkg-source: info: applying 0001-vcf-fix-ploidy-make-p-work-without-.-on-INC.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-15229042 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-15229042 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-15229042 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package vcftools dpkg-buildpackage: info: source version 0.1.16-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build vcftools-0.1.16 dpkg-buildpackage: info: host architecture s390x fakeroot debian/rules clean dh clean dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/vcftools.substvars debian/files rm -fr -- debian/vcftools/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i configure.ac:16: installing './compile' configure.ac:12: installing './install-sh' configure.ac:12: installing './missing' src/cpp/Makefile.am: installing './depcomp' find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --with-pmdir=/share/perl5 ./configure --build=s390x-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/s390x-linux-gnu --libexecdir=\${prefix}/lib/s390x-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --with-pmdir=/share/perl5 configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++... none checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking how to run the C preprocessor... gcc -E checking for perl... /usr/bin/perl checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for ZLIB... yes checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking for unistd.h... (cached) yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for inline... inline checking for int16_t... yes checking for int32_t... yes checking for int64_t... yes checking for int8_t... yes checking for off_t... yes checking for size_t... yes checking for ssize_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint8_t... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for error_at_line... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for gethostbyaddr... yes checking for gethostbyname... yes checking for memset... yes checking for pow... no checking for select... yes checking for socket... yes checking for sqrt... no checking for strchr... yes checking for strdup... yes checking for strerror... yes checking for strstr... yes checking for strtol... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/cpp/Makefile config.status: creating src/perl/Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory '/<>' dh_auto_build -a make -j4 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' Making all in cpp make[4]: Entering directory '/<>/src/cpp' g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-bcf_entry.o `test -f 'bcf_entry.cpp' || echo './'`bcf_entry.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-bcf_entry_setters.o `test -f 'bcf_entry_setters.cpp' || echo './'`bcf_entry_setters.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-bcf_file.o `test -f 'bcf_file.cpp' || echo './'`bcf_file.cpp gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-bgzf.o `test -f 'bgzf.c' || echo './'`bgzf.c bgzf.c: In function ‘bgzf_check_EOF’: bgzf.c:60:34: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] #define _bgzf_read(fp, buf, len) fread((buf), 1, (len), (FILE*)(fp)) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bgzf.c:622:2: note: in expansion of macro ‘_bgzf_read’ _bgzf_read(fp->fp, buf, 28); ^~~~~~~~~~ g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-dgeev.o `test -f 'dgeev.cpp' || echo './'`dgeev.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-entry.o `test -f 'entry.cpp' || echo './'`entry.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-entry_filters.o `test -f 'entry_filters.cpp' || echo './'`entry_filters.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-entry_getters.o `test -f 'entry_getters.cpp' || echo './'`entry_getters.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-entry_setters.o `test -f 'entry_setters.cpp' || echo './'`entry_setters.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-gamma.o `test -f 'gamma.cpp' || echo './'`gamma.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-header.o `test -f 'header.cpp' || echo './'`header.cpp gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-knetfile.o `test -f 'knetfile.c' || echo './'`knetfile.c In file included from knetfile.c:46: knetfile.c: In function ‘kftp_send_cmd’: knetfile.h:9:32: warning: ignoring return value of ‘write’, declared with attribute warn_unused_result [-Wunused-result] #define netwrite(fd, ptr, len) write(fd, ptr, len) ^~~~~~~~~~~~~~~~~~~ knetfile.c:236:2: note: in expansion of macro ‘netwrite’ netwrite(ftp->ctrl_fd, cmd, strlen(cmd)); ^~~~~~~~ knetfile.c: In function ‘khttp_connect_file’: knetfile.h:9:32: warning: ignoring return value of ‘write’, declared with attribute warn_unused_result [-Wunused-result] #define netwrite(fd, ptr, len) write(fd, ptr, len) ^~~~~~~~~~~~~~~~~~~ knetfile.c:415:2: note: in expansion of macro ‘netwrite’ netwrite(fp->fd, buf, l); ^~~~~~~~ g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-output_log.o `test -f 'output_log.cpp' || echo './'`output_log.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-parameters.o `test -f 'parameters.cpp' || echo './'`parameters.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-variant_file.o `test -f 'variant_file.cpp' || echo './'`variant_file.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-variant_file_diff.o `test -f 'variant_file_diff.cpp' || echo './'`variant_file_diff.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-variant_file_filters.o `test -f 'variant_file_filters.cpp' || echo './'`variant_file_filters.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-variant_file_format_convert.o `test -f 'variant_file_format_convert.cpp' || echo './'`variant_file_format_convert.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-variant_file_output.o `test -f 'variant_file_output.cpp' || echo './'`variant_file_output.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-vcf_entry.o `test -f 'vcf_entry.cpp' || echo './'`vcf_entry.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-vcf_entry_setters.o `test -f 'vcf_entry_setters.cpp' || echo './'`vcf_entry_setters.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-vcf_file.o `test -f 'vcf_file.cpp' || echo './'`vcf_file.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vcftools-vcftools.o `test -f 'vcftools.cpp' || echo './'`vcftools.cpp g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o vcftools vcftools-bcf_entry.o vcftools-bcf_entry_setters.o vcftools-bcf_file.o vcftools-bgzf.o vcftools-dgeev.o vcftools-entry.o vcftools-entry_filters.o vcftools-entry_getters.o vcftools-entry_setters.o vcftools-gamma.o vcftools-header.o vcftools-knetfile.o vcftools-output_log.o vcftools-parameters.o vcftools-variant_file.o vcftools-variant_file_diff.o vcftools-variant_file_filters.o vcftools-variant_file_format_convert.o vcftools-variant_file_output.o vcftools-vcf_entry.o vcftools-vcf_entry_setters.o vcftools-vcf_file.o vcftools-vcftools.o -lz make[4]: Leaving directory '/<>/src/cpp' Making all in perl make[4]: Entering directory '/<>/src/perl' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/src/perl' make[4]: Entering directory '/<>/src' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a make -j4 check VERBOSE=1 make[1]: Entering directory '/<>' Making check in src make[2]: Entering directory '/<>/src' Making check in cpp make[3]: Entering directory '/<>/src/cpp' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/cpp' Making check in perl make[3]: Entering directory '/<>/src/perl' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/perl' make[3]: Entering directory '/<>/src' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a rm -f -- debian/vcftools.substvars rm -fr -- debian/.debhelper/generated/vcftools/ debian/vcftools/ debian/tmp/ dh_auto_install -a make -j4 install DESTDIR=/<>/debian/vcftools AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in src make[2]: Entering directory '/<>/src' Making install in cpp make[3]: Entering directory '/<>/src/cpp' make[4]: Entering directory '/<>/src/cpp' /bin/mkdir -p '/<>/debian/vcftools/usr/bin' /bin/mkdir -p '/<>/debian/vcftools/usr/share/man/man1' /usr/bin/install -c vcftools '/<>/debian/vcftools/usr/bin' /usr/bin/install -c -m 644 vcftools.1 '/<>/debian/vcftools/usr/share/man/man1' make[4]: Leaving directory '/<>/src/cpp' make[3]: Leaving directory '/<>/src/cpp' Making install in perl make[3]: Entering directory '/<>/src/perl' make[4]: Entering directory '/<>/src/perl' /bin/mkdir -p '/<>/debian/vcftools/usr/bin' /bin/mkdir -p '/<>/debian/vcftools/usr//share/perl5' /usr/bin/install -c -m 644 FaSlice.pm Vcf.pm VcfStats.pm '/<>/debian/vcftools/usr//share/perl5' /usr/bin/install -c fill-aa fill-an-ac fill-fs fill-ref-md5 vcf-annotate vcf-compare vcf-concat vcf-consensus vcf-contrast vcf-convert vcf-fix-newlines vcf-fix-ploidy vcf-indel-stats vcf-isec vcf-merge vcf-phased-join vcf-query vcf-shuffle-cols vcf-sort vcf-stats vcf-subset vcf-to-tab vcf-tstv vcf-validator '/<>/debian/vcftools/usr/bin' make[4]: Leaving directory '/<>/src/perl' make[3]: Leaving directory '/<>/src/perl' make[3]: Entering directory '/<>/src' make[4]: Entering directory '/<>/src' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' rm -f debian/vcftools.debhelper.log debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install install -d debian/.debhelper/generated/vcftools for perlscript in `grep -l '#!/usr/bin/env \+perl' debian/*/usr/bin/*` ; do \ sed -i '1s+#!/usr/bin/env perl+#!/usr/bin/perl+' ${perlscript} ; \ done make[1]: Leaving directory '/<>' dh_installdocs -a install -d debian/vcftools/usr/share/doc/vcftools cp --reflink=auto -a ./debian/README.test debian/vcftools/usr/share/doc/vcftools cp --reflink=auto -a ./debian/tests/run-unit-test debian/vcftools/usr/share/doc/vcftools chown -R 0:0 debian/vcftools/usr/share/doc chmod -R u\+rw,go=rX debian/vcftools/usr/share/doc install -p -m0644 debian/copyright debian/vcftools/usr/share/doc/vcftools/copyright rm -f debian/vcftools.debhelper.log debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs src/perl/ChangeLog install -p -m0644 debian/changelog debian/vcftools/usr/share/doc/vcftools/changelog.Debian install -p -m0644 src/perl/ChangeLog debian/vcftools/usr/share/doc/vcftools/changelog make[1]: Leaving directory '/<>' rm -f debian/vcftools.debhelper.log debian/rules override_dh_installexamples make[1]: Entering directory '/<>' dh_installexamples; mkdir -p /<>/debian/vcftools/usr/share/doc/vcftools/examples/testsuite; mkdir -p /<>/debian/vcftools/usr/share/doc/vcftools/examples/testdata; cp ./examples/* /<>/debian/vcftools/usr/share/doc/vcftools/examples/testdata/; find ./src/perl/ \( -name "*.pm" -o -name "*fill*" -o -name "test.t" \) -exec cp \{\} /<>/debian/vcftools/usr/share/doc/vcftools/examples/testsuite \; sed -i 's#examples#testdata#g' /<>/debian/vcftools/usr/share/doc/vcftools/examples/testsuite/test.t; sed -i 's#I\.\./perl/#I\.\./\.#g' /<>/debian/vcftools/usr/share/doc/vcftools/examples/testsuite/test.t; sed -i 's#\.\./perl/#/usr/bin/#g' /<>/debian/vcftools/usr/share/doc/vcftools/examples/testsuite/test.t; for perlscript in `grep -lR '#!/usr/bin/env \+perl' debian/*/usr/share/doc/vcftools/examples` ; do \ sed -i '1s+#!/usr/bin/env perl+#!/usr/bin/perl+' ${perlscript} ; \ done make[1]: Leaving directory '/<>' dh_installman -a install -p -m0644 ./debian/mans/fill-aa.1 debian/vcftools/usr/share/man/man1/fill-aa.1 install -p -m0644 ./debian/mans/fill-an-ac.1 debian/vcftools/usr/share/man/man1/fill-an-ac.1 install -p -m0644 ./debian/mans/fill-fs.1 debian/vcftools/usr/share/man/man1/fill-fs.1 install -p -m0644 ./debian/mans/fill-ref-md5.1 debian/vcftools/usr/share/man/man1/fill-ref-md5.1 install -p -m0644 ./debian/mans/fill-rsIDs.1 debian/vcftools/usr/share/man/man1/fill-rsIDs.1 install -p -m0644 ./debian/mans/vcf-annotate.1 debian/vcftools/usr/share/man/man1/vcf-annotate.1 install -p -m0644 ./debian/mans/vcf-compare.1 debian/vcftools/usr/share/man/man1/vcf-compare.1 install -p -m0644 ./debian/mans/vcf-concat.1 debian/vcftools/usr/share/man/man1/vcf-concat.1 install -p -m0644 ./debian/mans/vcf-consensus.1 debian/vcftools/usr/share/man/man1/vcf-consensus.1 install -p -m0644 ./debian/mans/vcf-contrast.1 debian/vcftools/usr/share/man/man1/vcf-contrast.1 install -p -m0644 ./debian/mans/vcf-convert.1 debian/vcftools/usr/share/man/man1/vcf-convert.1 install -p -m0644 ./debian/mans/vcf-fix-newlines.1 debian/vcftools/usr/share/man/man1/vcf-fix-newlines.1 install -p -m0644 ./debian/mans/vcf-fix-ploidy.1 debian/vcftools/usr/share/man/man1/vcf-fix-ploidy.1 install -p -m0644 ./debian/mans/vcf-indel-stats.1 debian/vcftools/usr/share/man/man1/vcf-indel-stats.1 install -p -m0644 ./debian/mans/vcf-isec.1 debian/vcftools/usr/share/man/man1/vcf-isec.1 install -p -m0644 ./debian/mans/vcf-merge.1 debian/vcftools/usr/share/man/man1/vcf-merge.1 install -p -m0644 ./debian/mans/vcf-phased-join.1 debian/vcftools/usr/share/man/man1/vcf-phased-join.1 install -p -m0644 ./debian/mans/vcf-query.1 debian/vcftools/usr/share/man/man1/vcf-query.1 install -p -m0644 ./debian/mans/vcf-shuffle-cols.1 debian/vcftools/usr/share/man/man1/vcf-shuffle-cols.1 install -p -m0644 ./debian/mans/vcf-sort.1 debian/vcftools/usr/share/man/man1/vcf-sort.1 install -p -m0644 ./debian/mans/vcf-stats.1 debian/vcftools/usr/share/man/man1/vcf-stats.1 install -p -m0644 ./debian/mans/vcf-subset.1 debian/vcftools/usr/share/man/man1/vcf-subset.1 install -p -m0644 ./debian/mans/vcf-to-tab.1 debian/vcftools/usr/share/man/man1/vcf-to-tab.1 install -p -m0644 ./debian/mans/vcf-tstv.1 debian/vcftools/usr/share/man/man1/vcf-tstv.1 install -p -m0644 ./debian/mans/vcf-validator.1 debian/vcftools/usr/share/man/man1/vcf-validator.1 install -p -m0644 ./src/cpp/vcftools.1 debian/vcftools/usr/share/man/man1/vcftools.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-shuffle-cols.1 > debian/vcftools/usr/share/man/man1/vcf-shuffle-cols.1.dh-new man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-isec.1 > debian/vcftools/usr/share/man/man1/vcf-isec.1.dh-new man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/fill-ref-md5.1 > debian/vcftools/usr/share/man/man1/fill-ref-md5.1.dh-new man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-merge.1 > debian/vcftools/usr/share/man/man1/vcf-merge.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-isec.1.dh-new debian/vcftools/usr/share/man/man1/vcf-isec.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/fill-rsIDs.1 > debian/vcftools/usr/share/man/man1/fill-rsIDs.1.dh-new mv debian/vcftools/usr/share/man/man1/fill-ref-md5.1.dh-new debian/vcftools/usr/share/man/man1/fill-ref-md5.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-stats.1 > debian/vcftools/usr/share/man/man1/vcf-stats.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-shuffle-cols.1.dh-new debian/vcftools/usr/share/man/man1/vcf-shuffle-cols.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-phased-join.1 > debian/vcftools/usr/share/man/man1/vcf-phased-join.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-merge.1.dh-new debian/vcftools/usr/share/man/man1/vcf-merge.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-concat.1 > debian/vcftools/usr/share/man/man1/vcf-concat.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-stats.1.dh-new debian/vcftools/usr/share/man/man1/vcf-stats.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-validator.1 > debian/vcftools/usr/share/man/man1/vcf-validator.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-phased-join.1.dh-new debian/vcftools/usr/share/man/man1/vcf-phased-join.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-to-tab.1 > debian/vcftools/usr/share/man/man1/vcf-to-tab.1.dh-new mv debian/vcftools/usr/share/man/man1/fill-rsIDs.1.dh-new debian/vcftools/usr/share/man/man1/fill-rsIDs.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-compare.1 > debian/vcftools/usr/share/man/man1/vcf-compare.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-validator.1.dh-new debian/vcftools/usr/share/man/man1/vcf-validator.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-convert.1 > debian/vcftools/usr/share/man/man1/vcf-convert.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-to-tab.1.dh-new debian/vcftools/usr/share/man/man1/vcf-to-tab.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-contrast.1 > debian/vcftools/usr/share/man/man1/vcf-contrast.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-concat.1.dh-new debian/vcftools/usr/share/man/man1/vcf-concat.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-fix-newlines.1 > debian/vcftools/usr/share/man/man1/vcf-fix-newlines.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-compare.1.dh-new debian/vcftools/usr/share/man/man1/vcf-compare.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcftools.1 > debian/vcftools/usr/share/man/man1/vcftools.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-convert.1.dh-new debian/vcftools/usr/share/man/man1/vcf-convert.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/fill-an-ac.1 > debian/vcftools/usr/share/man/man1/fill-an-ac.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-fix-newlines.1.dh-new debian/vcftools/usr/share/man/man1/vcf-fix-newlines.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/fill-aa.1 > debian/vcftools/usr/share/man/man1/fill-aa.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-contrast.1.dh-new debian/vcftools/usr/share/man/man1/vcf-contrast.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/fill-fs.1 > debian/vcftools/usr/share/man/man1/fill-fs.1.dh-new mv debian/vcftools/usr/share/man/man1/fill-an-ac.1.dh-new debian/vcftools/usr/share/man/man1/fill-an-ac.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-consensus.1 > debian/vcftools/usr/share/man/man1/vcf-consensus.1.dh-new mv debian/vcftools/usr/share/man/man1/fill-aa.1.dh-new debian/vcftools/usr/share/man/man1/fill-aa.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-indel-stats.1 > debian/vcftools/usr/share/man/man1/vcf-indel-stats.1.dh-new mv debian/vcftools/usr/share/man/man1/vcftools.1.dh-new debian/vcftools/usr/share/man/man1/vcftools.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-annotate.1 > debian/vcftools/usr/share/man/man1/vcf-annotate.1.dh-new mv debian/vcftools/usr/share/man/man1/fill-fs.1.dh-new debian/vcftools/usr/share/man/man1/fill-fs.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-subset.1 > debian/vcftools/usr/share/man/man1/vcf-subset.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-consensus.1.dh-new debian/vcftools/usr/share/man/man1/vcf-consensus.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-tstv.1 > debian/vcftools/usr/share/man/man1/vcf-tstv.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-indel-stats.1.dh-new debian/vcftools/usr/share/man/man1/vcf-indel-stats.1 chmod 0644 -- debian/vcftools/usr/share/man/man1/vcf-merge.1 debian/vcftools/usr/share/man/man1/vcf-concat.1 debian/vcftools/usr/share/man/man1/vcf-fix-newlines.1 debian/vcftools/usr/share/man/man1/fill-aa.1 debian/vcftools/usr/share/man/man1/vcf-indel-stats.1 mv debian/vcftools/usr/share/man/man1/vcf-annotate.1.dh-new debian/vcftools/usr/share/man/man1/vcf-annotate.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-fix-ploidy.1 > debian/vcftools/usr/share/man/man1/vcf-fix-ploidy.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-tstv.1.dh-new debian/vcftools/usr/share/man/man1/vcf-tstv.1 chmod 0644 -- debian/vcftools/usr/share/man/man1/fill-ref-md5.1 debian/vcftools/usr/share/man/man1/vcf-stats.1 debian/vcftools/usr/share/man/man1/vcf-validator.1 debian/vcftools/usr/share/man/man1/vcf-convert.1 debian/vcftools/usr/share/man/man1/fill-an-ac.1 debian/vcftools/usr/share/man/man1/vcf-consensus.1 debian/vcftools/usr/share/man/man1/vcf-tstv.1 mv debian/vcftools/usr/share/man/man1/vcf-subset.1.dh-new debian/vcftools/usr/share/man/man1/vcf-subset.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-sort.1 > debian/vcftools/usr/share/man/man1/vcf-sort.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-fix-ploidy.1.dh-new debian/vcftools/usr/share/man/man1/vcf-fix-ploidy.1 man -l --recode UTF-8 ./debian/vcftools/usr/share/man/man1/vcf-query.1 > debian/vcftools/usr/share/man/man1/vcf-query.1.dh-new mv debian/vcftools/usr/share/man/man1/vcf-sort.1.dh-new debian/vcftools/usr/share/man/man1/vcf-sort.1 chmod 0644 -- debian/vcftools/usr/share/man/man1/vcf-shuffle-cols.1 debian/vcftools/usr/share/man/man1/vcf-phased-join.1 debian/vcftools/usr/share/man/man1/vcf-to-tab.1 debian/vcftools/usr/share/man/man1/vcf-contrast.1 debian/vcftools/usr/share/man/man1/fill-fs.1 debian/vcftools/usr/share/man/man1/vcf-subset.1 debian/vcftools/usr/share/man/man1/vcf-sort.1 mv debian/vcftools/usr/share/man/man1/vcf-query.1.dh-new debian/vcftools/usr/share/man/man1/vcf-query.1 chmod 0644 -- debian/vcftools/usr/share/man/man1/vcf-isec.1 debian/vcftools/usr/share/man/man1/fill-rsIDs.1 debian/vcftools/usr/share/man/man1/vcf-compare.1 debian/vcftools/usr/share/man/man1/vcftools.1 debian/vcftools/usr/share/man/man1/vcf-annotate.1 debian/vcftools/usr/share/man/man1/vcf-fix-ploidy.1 debian/vcftools/usr/share/man/man1/vcf-query.1 dh_perl -a (grep -a -s -v perl:Depends debian/vcftools.substvars; echo perl:Depends=perl) > debian/vcftools.substvars.new mv debian/vcftools.substvars.new debian/vcftools.substvars rmdir --ignore-fail-on-non-empty --parents debian/vcftools/usr/share/perl5 dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/vcftools chmod a-x usr/share/doc/vcftools/changelog usr/share/doc/vcftools/changelog.Debian usr/share/doc/vcftools/examples/testdata/contrast.out usr/share/doc/vcftools/examples/testdata/contrast.vcf usr/share/doc/vcftools/examples/testdata/filters.txt usr/share/doc/vcftools/examples/testdata/fix-ploidy.vcf usr/share/doc/vcftools/examples/testdata/valid-4.0.vcf.stats usr/share/doc/vcftools/examples/testsuite/FaSlice.pm usr/share/doc/vcftools/examples/testsuite/Vcf.pm usr/share/doc/vcftools/examples/testsuite/VcfStats.pm usr/share/doc/vcftools/examples/testsuite/fill-aa usr/share/doc/vcftools/examples/testsuite/fill-fs usr/share/doc/vcftools/examples/testsuite/fill-ref-md5 usr/share/doc/vcftools/examples/testsuite/test.t usr/share/man/man1/fill-aa.1 usr/share/man/man1/fill-an-ac.1 usr/share/man/man1/fill-fs.1 usr/share/man/man1/fill-ref-md5.1 usr/share/man/man1/fill-rsIDs.1 usr/share/man/man1/vcf-annotate.1 usr/share/man/man1/vcf-compare.1 usr/share/man/man1/vcf-concat.1 usr/share/man/man1/vcf-consensus.1 usr/share/man/man1/vcf-contrast.1 usr/share/man/man1/vcf-convert.1 usr/share/man/man1/vcf-fix-newlines.1 usr/share/man/man1/vcf-fix-ploidy.1 usr/share/man/man1/vcf-indel-stats.1 usr/share/man/man1/vcf-isec.1 usr/share/man/man1/vcf-merge.1 usr/share/man/man1/vcf-phased-join.1 usr/share/man/man1/vcf-query.1 usr/share/man/man1/vcf-shuffle-cols.1 usr/share/man/man1/vcf-sort.1 usr/share/man/man1/vcf-stats.1 usr/share/man/man1/vcf-subset.1 usr/share/man/man1/vcf-to-tab.1 usr/share/man/man1/vcf-tstv.1 usr/share/man/man1/vcf-validator.1 usr/share/man/man1/vcftools.1 gzip -9nf usr/share/doc/vcftools/changelog usr/share/doc/vcftools/changelog.Debian usr/share/doc/vcftools/examples/testdata/contrast.out usr/share/doc/vcftools/examples/testdata/contrast.vcf usr/share/doc/vcftools/examples/testdata/filters.txt usr/share/doc/vcftools/examples/testdata/fix-ploidy.vcf usr/share/doc/vcftools/examples/testdata/valid-4.0.vcf.stats usr/share/doc/vcftools/examples/testsuite/FaSlice.pm usr/share/doc/vcftools/examples/testsuite/Vcf.pm usr/share/doc/vcftools/examples/testsuite/VcfStats.pm usr/share/doc/vcftools/examples/testsuite/fill-aa usr/share/doc/vcftools/examples/testsuite/fill-fs usr/share/doc/vcftools/examples/testsuite/fill-ref-md5 usr/share/doc/vcftools/examples/testsuite/test.t usr/share/man/man1/fill-aa.1 usr/share/man/man1/fill-an-ac.1 usr/share/man/man1/fill-fs.1 usr/share/man/man1/fill-ref-md5.1 usr/share/man/man1/fill-rsIDs.1 usr/share/man/man1/vcf-annotate.1 usr/share/man/man1/vcf-compare.1 usr/share/man/man1/vcf-concat.1 usr/share/man/man1/vcf-consensus.1 usr/share/man/man1/vcf-contrast.1 usr/share/man/man1/vcf-convert.1 usr/share/man/man1/vcf-fix-newlines.1 usr/share/man/man1/vcf-fix-ploidy.1 usr/share/man/man1/vcf-indel-stats.1 usr/share/man/man1/vcf-isec.1 usr/share/man/man1/vcf-merge.1 usr/share/man/man1/vcf-phased-join.1 usr/share/man/man1/vcf-query.1 usr/share/man/man1/vcf-shuffle-cols.1 usr/share/man/man1/vcf-sort.1 usr/share/man/man1/vcf-stats.1 usr/share/man/man1/vcf-subset.1 usr/share/man/man1/vcf-to-tab.1 usr/share/man/man1/vcf-tstv.1 usr/share/man/man1/vcf-validator.1 usr/share/man/man1/vcftools.1 cd '/<>' dh_fixperms -a find debian/vcftools -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/vcftools ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/vcftools/usr/share/doc -type f -a -true -a ! -regex 'debian/vcftools/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/vcftools/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/vcftools/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/vcftools/usr/share/perl5 -type f -perm -5 -name '*.pm' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a-X find debian/vcftools -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/vcftools/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a dh_strip -a install -d debian/.debhelper/vcftools/dbgsym-root/usr/lib/debug/.build-id/ff objcopy --only-keep-debug --compress-debug-sections debian/vcftools/usr/bin/vcftools debian/.debhelper/vcftools/dbgsym-root/usr/lib/debug/.build-id/ff/ee121416bcf3dd271da69ceef74eed28fdd085.debug chmod 0644 -- debian/.debhelper/vcftools/dbgsym-root/usr/lib/debug/.build-id/ff/ee121416bcf3dd271da69ceef74eed28fdd085.debug chown 0:0 -- debian/.debhelper/vcftools/dbgsym-root/usr/lib/debug/.build-id/ff/ee121416bcf3dd271da69ceef74eed28fdd085.debug strip --remove-section=.comment --remove-section=.note debian/vcftools/usr/bin/vcftools objcopy --add-gnu-debuglink debian/.debhelper/vcftools/dbgsym-root/usr/lib/debug/.build-id/ff/ee121416bcf3dd271da69ceef74eed28fdd085.debug debian/vcftools/usr/bin/vcftools install -d debian/.debhelper/vcftools/dbgsym-root/usr/share/doc ln -s vcftools debian/.debhelper/vcftools/dbgsym-root/usr/share/doc/vcftools-dbgsym dh_makeshlibs -a rm -f debian/vcftools/DEBIAN/shlibs dh_shlibdeps -a install -d debian/vcftools/DEBIAN dpkg-shlibdeps -Tdebian/vcftools.substvars debian/vcftools/usr/bin/vcftools dh_installdeb -a dh_gencontrol -a echo misc:Depends= >> debian/vcftools.substvars echo misc:Pre-Depends= >> debian/vcftools.substvars install -d debian/.debhelper/vcftools/dbgsym-root/DEBIAN dpkg-gencontrol -pvcftools -ldebian/changelog -Tdebian/vcftools.substvars -Pdebian/.debhelper/vcftools/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=vcftools-dbgsym "-DDepends=vcftools (= \${binary:Version})" "-DDescription=debug symbols for vcftools" -DBuild-Ids=ffee121416bcf3dd271da69ceef74eed28fdd085 -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/vcftools/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/vcftools/dbgsym-root/DEBIAN/control dpkg-gencontrol -pvcftools -ldebian/changelog -Tdebian/vcftools.substvars -Pdebian/vcftools -UMulti-Arch chmod 0644 -- debian/vcftools/DEBIAN/control chown 0:0 -- debian/vcftools/DEBIAN/control dh_md5sums -a (cd debian/vcftools >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/vcftools/DEBIAN/md5sums chown 0:0 -- debian/vcftools/DEBIAN/md5sums (cd debian/.debhelper/vcftools/dbgsym-root >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/.debhelper/vcftools/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/vcftools/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --build debian/vcftools .. install -d debian/.debhelper/scratch-space/build-vcftools dpkg-deb --build debian/.debhelper/vcftools/dbgsym-root debian/.debhelper/scratch-space/build-vcftools INFO: pkgstriptranslations version 141 INFO: pkgstriptranslations version 141 pkgstriptranslations: processing vcftools (in debian/vcftools); do_strip: , oemstrip: pkgstriptranslations: processing vcftools-dbgsym (in debian/.debhelper/vcftools/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/vcftools/DEBIAN/control, package vcftools, directory debian/vcftools .. removing usr/share/doc/vcftools/changelog.gz pkgstripfiles: processing control file: debian/.debhelper/vcftools/dbgsym-root/DEBIAN/control, package vcftools-dbgsym, directory debian/.debhelper/vcftools/dbgsym-root dpkg-deb: building package 'vcftools-dbgsym' in 'debian/.debhelper/scratch-space/build-vcftools/vcftools-dbgsym_0.1.16-1_s390x.deb'. pkgstripfiles: Truncating usr/share/doc/vcftools/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package vcftools ... pkgstripfiles: No PNG files. dpkg-deb: building package 'vcftools' in '../vcftools_0.1.16-1_s390x.deb'. Renaming vcftools-dbgsym_0.1.16-1_s390x.deb to vcftools-dbgsym_0.1.16-1_s390x.ddeb mv debian/.debhelper/scratch-space/build-vcftools/vcftools-dbgsym_0.1.16-1_s390x.deb ../vcftools-dbgsym_0.1.16-1_s390x.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../vcftools_0.1.16-1_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build vcftools-0.1.16 dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20180803-2310 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ vcftools_0.1.16-1_s390x.changes: -------------------------------- Format: 1.8 Date: Fri, 03 Aug 2018 16:20:50 +0200 Source: vcftools Binary: vcftools Architecture: s390x Version: 0.1.16-1 Distribution: cosmic-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: vcftools - Collection of tools to work with VCF files Closes: 902190 Changes: vcftools (0.1.16-1) unstable; urgency=medium . * New upstream version dealing with CVE-2018-11099, CVE-2018-11129 and CVE-2018-11130 Closes: #902190 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.5 * Remove unneeded get-orig-source target * Fix interpreter line in Perl scripts Checksums-Sha1: cb5ab7d468145959b8d4d9dc56d3fb3aa56950e6 5806104 vcftools-dbgsym_0.1.16-1_s390x.ddeb 2ead741cb1d91c230183025bcae8953980b88f81 5053 vcftools_0.1.16-1_s390x.buildinfo ba8cdae062e49ea430aab41247af1d5e15c03a1d 415040 vcftools_0.1.16-1_s390x.deb Checksums-Sha256: a9b31af32201d9c16c7bdb3c01e21142e17f51d483eb474ddc950ab77e027c2e 5806104 vcftools-dbgsym_0.1.16-1_s390x.ddeb 2050a906a280c02789842a52f952cbb7dd3b205decfad770c2a131603180194f 5053 vcftools_0.1.16-1_s390x.buildinfo 26ca2fbed869c43cd98179d88b57e78bdc445acf5744ab56c73abc2d64cbe914 415040 vcftools_0.1.16-1_s390x.deb Files: 4198036ffc134e016f18df2e9909631d 5806104 debug optional vcftools-dbgsym_0.1.16-1_s390x.ddeb bd855f57baf6b3b9555c46f9267f3a7e 5053 science optional vcftools_0.1.16-1_s390x.buildinfo ae56f13f8d1af4cbdc0da01219f51bf1 415040 science optional vcftools_0.1.16-1_s390x.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ vcftools_0.1.16-1_s390x.deb --------------------------- new debian package, version 2.0. size 415040 bytes: control archive=3548 bytes. 763 bytes, 16 lines control 8585 bytes, 113 lines md5sums Package: vcftools Version: 0.1.16-1 Architecture: s390x Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1409 Depends: libc6 (>= 2.15), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.6), perl Recommends: tabix Section: science Priority: optional Homepage: https://vcftools.github.io/ Description: Collection of tools to work with VCF files VCFtools is a program package designed for working with VCF files, such as those generated by the 1000 Genomes Project. The aim of VCFtools is to provide methods for working with VCF files: validating, merging, comparing and calculate some basic population genetic statistics. drwxr-xr-x root/root 0 2018-08-03 14:20 ./ drwxr-xr-x root/root 0 2018-08-03 14:20 ./usr/ drwxr-xr-x root/root 0 2018-08-03 14:20 ./usr/bin/ -rwxr-xr-x root/root 6100 2018-08-03 14:20 ./usr/bin/fill-aa -rwxr-xr-x root/root 1257 2018-08-03 14:20 ./usr/bin/fill-an-ac -rwxr-xr-x root/root 8064 2018-08-03 14:20 ./usr/bin/fill-fs -rwxr-xr-x root/root 6563 2018-08-03 14:20 ./usr/bin/fill-ref-md5 -rwxr-xr-x root/root 51249 2018-08-03 14:20 ./usr/bin/vcf-annotate -rwxr-xr-x root/root 57386 2018-08-03 14:20 ./usr/bin/vcf-compare -rwxr-xr-x root/root 10948 2018-08-03 14:20 ./usr/bin/vcf-concat -rwxr-xr-x root/root 9222 2018-08-03 14:20 ./usr/bin/vcf-consensus -rwxr-xr-x root/root 8793 2018-08-03 14:20 ./usr/bin/vcf-contrast -rwxr-xr-x root/root 6167 2018-08-03 14:20 ./usr/bin/vcf-convert -rwxr-xr-x root/root 2294 2018-08-03 14:20 ./usr/bin/vcf-fix-newlines -rwxr-xr-x root/root 10811 2018-08-03 14:20 ./usr/bin/vcf-fix-ploidy -rwxr-xr-x root/root 4372 2018-08-03 14:20 ./usr/bin/vcf-indel-stats -rwxr-xr-x root/root 21169 2018-08-03 14:20 ./usr/bin/vcf-isec -rwxr-xr-x root/root 22984 2018-08-03 14:20 ./usr/bin/vcf-merge -rwxr-xr-x root/root 23230 2018-08-03 14:20 ./usr/bin/vcf-phased-join -rwxr-xr-x root/root 15828 2018-08-03 14:20 ./usr/bin/vcf-query -rwxr-xr-x root/root 2297 2018-08-03 14:20 ./usr/bin/vcf-shuffle-cols -rwxr-xr-x root/root 3306 2018-08-03 14:20 ./usr/bin/vcf-sort -rwxr-xr-x root/root 4870 2018-08-03 14:20 ./usr/bin/vcf-stats -rwxr-xr-x root/root 7702 2018-08-03 14:20 ./usr/bin/vcf-subset -rwxr-xr-x root/root 2539 2018-08-03 14:20 ./usr/bin/vcf-to-tab -rwxr-xr-x root/root 1816 2018-08-03 14:20 ./usr/bin/vcf-tstv -rwxr-xr-x root/root 3349 2018-08-03 14:20 ./usr/bin/vcf-validator -rwxr-xr-x root/root 804968 2018-08-03 14:20 ./usr/bin/vcftools drwxr-xr-x root/root 0 2018-08-03 14:20 ./usr/share/ drwxr-xr-x root/root 0 2018-08-03 14:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-08-03 14:20 ./usr/share/doc/vcftools/ -rw-r--r-- root/root 261 2018-08-03 14:20 ./usr/share/doc/vcftools/README.test -rw-r--r-- root/root 1303 2018-08-03 14:20 ./usr/share/doc/vcftools/changelog.Debian.gz -rw-r--r-- root/root 1154 2018-08-03 14:20 ./usr/share/doc/vcftools/copyright drwxr-xr-x root/root 0 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/ drwxr-xr-x root/root 0 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/ -rw-r--r-- root/root 1685 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/annotate-test.vcf -rw-r--r-- root/root 1376 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/annotate.out -rw-r--r-- root/root 299 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/annotate.txt -rw-r--r-- root/root 3107 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/annotate2.out -rw-r--r-- root/root 1394 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/annotate3.out -rw-r--r-- root/root 522 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/cmp-test-a-3.3.vcf -rw-r--r-- root/root 638 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/cmp-test-a.vcf -rw-r--r-- root/root 520 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/cmp-test-b-3.3.vcf -rw-r--r-- root/root 636 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/cmp-test-b.vcf -rw-r--r-- root/root 2633 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/cmp-test.out -rw-r--r-- root/root 1180 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/concat-a.vcf -rw-r--r-- root/root 674 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/concat-b.vcf -rw-r--r-- root/root 972 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/concat-c.vcf -rw-r--r-- root/root 2074 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/concat.out -rw-r--r-- root/root 1038 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/consensus.fa -rw-r--r-- root/root 1037 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/consensus.out -rw-r--r-- root/root 1037 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/consensus.out2 -rw-r--r-- root/root 275 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/consensus.vcf -rw-r--r-- root/root 2312 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/contrast.out.gz -rw-r--r-- root/root 8723 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/contrast.vcf.gz -rw-r--r-- root/root 1524 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/fill-an-ac.out -rw-r--r-- root/root 1800 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/filters.txt.gz -rw-r--r-- root/root 1924 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/fix-ploidy.out -rw-r--r-- root/root 42 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/fix-ploidy.samples -rw-r--r-- root/root 223 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/fix-ploidy.txt -rw-r--r-- root/root 3335 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/fix-ploidy.vcf.gz -rw-r--r-- root/root 564 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/floats.vcf -rw-r--r-- root/root 48 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/indel-stats.out -rw-r--r-- root/root 24 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/indel-stats.tab -rw-r--r-- root/root 523 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/indel-stats.vcf -rw-r--r-- root/root 2086 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/invalid-4.0.vcf -rw-r--r-- root/root 1120 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/isec-n2-test.vcf.out -rw-r--r-- root/root 965 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/merge-test-a.vcf -rw-r--r-- root/root 1020 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/merge-test-b.vcf -rw-r--r-- root/root 798 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/merge-test-c.vcf -rw-r--r-- root/root 2240 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/merge-test.vcf.out -rw-r--r-- root/root 230 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/parse-test.vcf -rw-r--r-- root/root 1435 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/perl-api-1.pl -rw-r--r-- root/root 255 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/query-test.out -rw-r--r-- root/root 638 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/shuffle-test.vcf -rw-r--r-- root/root 522 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/subset.SNPs.out -rw-r--r-- root/root 931 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/subset.indels.out -rw-r--r-- root/root 1229 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/subset.vcf -rw-r--r-- root/root 1612 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/valid-3.3.vcf -rw-r--r-- root/root 2182 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/valid-4.0.vcf -rw-r--r-- root/root 465 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/valid-4.0.vcf.stats.gz -rw-r--r-- root/root 2999 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testdata/valid-4.1.vcf drwxr-xr-x root/root 0 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testsuite/ -rw-r--r-- root/root 2284 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testsuite/FaSlice.pm.gz -rw-r--r-- root/root 23876 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testsuite/Vcf.pm.gz -rw-r--r-- root/root 4404 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testsuite/VcfStats.pm.gz -rw-r--r-- root/root 2201 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testsuite/fill-aa.gz -rwxr-xr-x root/root 1257 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testsuite/fill-an-ac -rw-r--r-- root/root 2669 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testsuite/fill-fs.gz -rw-r--r-- root/root 2347 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testsuite/fill-ref-md5.gz -rw-r--r-- root/root 3615 2018-08-03 14:20 ./usr/share/doc/vcftools/examples/testsuite/test.t.gz -rw-r--r-- root/root 381 2018-08-03 14:20 ./usr/share/doc/vcftools/run-unit-test drwxr-xr-x root/root 0 2018-08-03 14:20 ./usr/share/man/ drwxr-xr-x root/root 0 2018-08-03 14:20 ./usr/share/man/man1/ -rw-r--r-- root/root 272 2018-08-03 14:20 ./usr/share/man/man1/fill-aa.1.gz -rw-r--r-- root/root 241 2018-08-03 14:20 ./usr/share/man/man1/fill-an-ac.1.gz -rw-r--r-- root/root 664 2018-08-03 14:20 ./usr/share/man/man1/fill-fs.1.gz -rw-r--r-- root/root 654 2018-08-03 14:20 ./usr/share/man/man1/fill-ref-md5.1.gz -rw-r--r-- root/root 280 2018-08-03 14:20 ./usr/share/man/man1/fill-rsIDs.1.gz -rw-r--r-- root/root 1281 2018-08-03 14:20 ./usr/share/man/man1/vcf-annotate.1.gz -rw-r--r-- root/root 852 2018-08-03 14:20 ./usr/share/man/man1/vcf-compare.1.gz -rw-r--r-- root/root 518 2018-08-03 14:20 ./usr/share/man/man1/vcf-concat.1.gz -rw-r--r-- root/root 277 2018-08-03 14:20 ./usr/share/man/man1/vcf-consensus.1.gz -rw-r--r-- root/root 724 2018-08-03 14:20 ./usr/share/man/man1/vcf-contrast.1.gz -rw-r--r-- root/root 389 2018-08-03 14:20 ./usr/share/man/man1/vcf-convert.1.gz -rw-r--r-- root/root 429 2018-08-03 14:20 ./usr/share/man/man1/vcf-fix-newlines.1.gz -rw-r--r-- root/root 651 2018-08-03 14:20 ./usr/share/man/man1/vcf-fix-ploidy.1.gz -rw-r--r-- root/root 366 2018-08-03 14:20 ./usr/share/man/man1/vcf-indel-stats.1.gz -rw-r--r-- root/root 956 2018-08-03 14:20 ./usr/share/man/man1/vcf-isec.1.gz -rw-r--r-- root/root 599 2018-08-03 14:20 ./usr/share/man/man1/vcf-merge.1.gz -rw-r--r-- root/root 551 2018-08-03 14:20 ./usr/share/man/man1/vcf-phased-join.1.gz -rw-r--r-- root/root 500 2018-08-03 14:20 ./usr/share/man/man1/vcf-query.1.gz -rw-r--r-- root/root 343 2018-08-03 14:20 ./usr/share/man/man1/vcf-shuffle-cols.1.gz -rw-r--r-- root/root 254 2018-08-03 14:20 ./usr/share/man/man1/vcf-sort.1.gz -rw-r--r-- root/root 685 2018-08-03 14:20 ./usr/share/man/man1/vcf-stats.1.gz -rw-r--r-- root/root 558 2018-08-03 14:20 ./usr/share/man/man1/vcf-subset.1.gz -rw-r--r-- root/root 280 2018-08-03 14:20 ./usr/share/man/man1/vcf-to-tab.1.gz -rw-r--r-- root/root 227 2018-08-03 14:20 ./usr/share/man/man1/vcf-tstv.1.gz -rw-r--r-- root/root 307 2018-08-03 14:20 ./usr/share/man/man1/vcf-validator.1.gz -rw-r--r-- root/root 8615 2018-08-03 14:20 ./usr/share/man/man1/vcftools.1.gz drwxr-xr-x root/root 0 2018-08-03 14:20 ./usr/share/perl5/ -rw-r--r-- root/root 6724 2018-08-03 14:20 ./usr/share/perl5/FaSlice.pm -rw-r--r-- root/root 107597 2018-08-03 14:20 ./usr/share/perl5/Vcf.pm -rw-r--r-- root/root 18147 2018-08-03 14:20 ./usr/share/perl5/VcfStats.pm +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: s390x Build-Space: 104812 Build-Time: 32 Distribution: cosmic-proposed Host Architecture: s390x Install-Time: 5 Job: vcftools_0.1.16-1.dsc Machine Architecture: s390x Package: vcftools Package-Time: 38 Source-Version: 0.1.16-1 Space: 104812 Status: successful Version: 0.1.16-1 -------------------------------------------------------------------------------- Finished at 20180803-2310 Build needed 00:00:38, 104812k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=cosmic --arch=s390x PACKAGEBUILD-15229042 Scanning for processes to kill in build PACKAGEBUILD-15229042