RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '9c57014cc51c1b7084e5bcfb36f95e10a549f324', '/home/buildd/filecache-default/6afedd9cd2f1b8e8bab962dde18debc51de7acac'] Synching the system clock with the buildd NTP service... 18 Oct 15:39:32 ntpdate[26075]: adjust time server 10.211.37.1 offset -0.000014 sec Unpacking chroot for build 9c57014cc51c1b7084e5bcfb36f95e10a549f324 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '9c57014cc51c1b7084e5bcfb36f95e10a549f324'] Mounting chroot for build 9c57014cc51c1b7084e5bcfb36f95e10a549f324 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '9c57014cc51c1b7084e5bcfb36f95e10a549f324', 'deb http://ftpmaster.internal/ubuntu precise main universe'] Overriding sources.list in build-9c57014cc51c1b7084e5bcfb36f95e10a549f324 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '9c57014cc51c1b7084e5bcfb36f95e10a549f324', 'i386'] Updating debian chroot for build 9c57014cc51c1b7084e5bcfb36f95e10a549f324 Ign http://ftpmaster.internal precise InRelease Get:1 http://ftpmaster.internal precise Release.gpg [198 B] Get:2 http://ftpmaster.internal precise Release [49.6 kB] Get:3 http://ftpmaster.internal precise/main i386 Packages [1230 kB] Get:4 http://ftpmaster.internal precise/universe i386 Packages [4503 kB] Get:5 http://ftpmaster.internal precise/main TranslationIndex [74 B] Get:6 http://ftpmaster.internal precise/universe TranslationIndex [75 B] Get:7 http://ftpmaster.internal precise/main Translation-en [703 kB] Get:8 http://ftpmaster.internal precise/universe Translation-en [3200 kB] Fetched 9685 kB in 4s (2224 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: liblockfile-bin libp11-kit0 The following packages will be upgraded: base-files binutils bzip2 coreutils cpp-4.6 dpkg dpkg-dev e2fslibs e2fsprogs fakeroot g++-4.6 gcc-4.6 gcc-4.6-base grep iproute libalgorithm-diff-xs-perl libbz2-1.0 libclass-isa-perl libcomerr2 libdpkg-perl libffi6 libgcc1 libgcrypt11 libgmp10 libgmpxx4ldbl libgnutls26 libgomp1 libgpg-error0 libidn11 libkeyutils1 liblockfile1 liblzma2 libmpfr4 libncurses5 libncursesw5 libnih-dbus1 libnih1 libpcre3 libquadmath0 libreadline6 librtmp0 libselinux1 libss2 libstdc++6 libstdc++6-4.6-dev libswitch-perl libtinfo5 libusb-0.1-4 lockfile-progs manpages manpages-dev ncurses-base ncurses-bin netbase python-minimal readline-common xz-utils 57 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 35.7 MB of archives. After this operation, 498 kB disk space will be freed. WARNING: The following packages cannot be authenticated! base-files dpkg coreutils libcomerr2 e2fslibs e2fsprogs grep ncurses-bin ncurses-base python-minimal readline-common libncursesw5 libtinfo5 libncurses5 libreadline6 libgomp1 gcc-4.6-base libstdc++6 cpp-4.6 libquadmath0 libstdc++6-4.6-dev g++-4.6 gcc-4.6 libgcc1 libgmp10 libmpfr4 binutils libusb-0.1-4 bzip2 libbz2-1.0 liblzma2 libselinux1 libss2 liblockfile1 liblockfile-bin libffi6 libpcre3 libp11-kit0 libgnutls26 libgpg-error0 libgcrypt11 libidn11 libkeyutils1 libgmpxx4ldbl librtmp0 xz-utils lockfile-progs netbase iproute libnih-dbus1 libnih1 manpages dpkg-dev libdpkg-perl fakeroot libalgorithm-diff-xs-perl libclass-isa-perl libswitch-perl manpages-dev Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise/main base-files i386 6.4ubuntu6 [56.1 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise/main dpkg i386 1.16.1ubuntu1 [1818 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise/main coreutils i386 8.13-3ubuntu1 [2516 kB] Get:4 http://ftpmaster.internal/ubuntu/ precise/main libcomerr2 i386 1.42~WIP-2011-10-09-1ubuntu1 [56.5 kB] Get:5 http://ftpmaster.internal/ubuntu/ precise/main e2fslibs i386 1.42~WIP-2011-10-09-1ubuntu1 [199 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise/main e2fsprogs i386 1.42~WIP-2011-10-09-1ubuntu1 [899 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise/main grep i386 2.9-2 [244 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise/main ncurses-bin i386 5.9-2 [149 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise/main ncurses-base all 5.9-2 [21.9 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise/main python-minimal all 2.7.2-7ubuntu4 [29.8 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise/main readline-common all 6.2-7 [49.9 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise/main libncursesw5 i386 5.9-2 [170 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise/main libtinfo5 i386 5.9-2 [65.0 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise/main libncurses5 i386 5.9-2 [142 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise/main libreadline6 i386 6.2-7 [134 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise/main libgomp1 i386 4.6.1-15ubuntu1 [28.3 kB] Get:17 http://ftpmaster.internal/ubuntu/ precise/main gcc-4.6-base i386 4.6.1-15ubuntu1 [15.4 kB] Get:18 http://ftpmaster.internal/ubuntu/ precise/main libstdc++6 i386 4.6.1-15ubuntu1 [333 kB] Get:19 http://ftpmaster.internal/ubuntu/ precise/main cpp-4.6 i386 4.6.1-15ubuntu1 [4650 kB] Get:20 http://ftpmaster.internal/ubuntu/ precise/main libquadmath0 i386 4.6.1-15ubuntu1 [195 kB] Get:21 http://ftpmaster.internal/ubuntu/ precise/main libstdc++6-4.6-dev i386 4.6.1-15ubuntu1 [1627 kB] Get:22 http://ftpmaster.internal/ubuntu/ precise/main g++-4.6 i386 4.6.1-15ubuntu1 [6781 kB] Get:23 http://ftpmaster.internal/ubuntu/ precise/main gcc-4.6 i386 4.6.1-15ubuntu1 [7542 kB] Get:24 http://ftpmaster.internal/ubuntu/ precise/main libgcc1 i386 1:4.6.1-15ubuntu1 [54.3 kB] Get:25 http://ftpmaster.internal/ubuntu/ precise/main libgmp10 i386 2:5.0.2+dfsg-1ubuntu1 [264 kB] Get:26 http://ftpmaster.internal/ubuntu/ precise/main libmpfr4 i386 3.0.1-6 [188 kB] Get:27 http://ftpmaster.internal/ubuntu/ precise/main binutils i386 2.21.90.20111004-2ubuntu1 [2385 kB] Get:28 http://ftpmaster.internal/ubuntu/ precise/main libusb-0.1-4 i386 2:0.1.12-19 [16.8 kB] Get:29 http://ftpmaster.internal/ubuntu/ precise/main bzip2 i386 1.0.5-7 [37.2 kB] Get:30 http://ftpmaster.internal/ubuntu/ precise/main libbz2-1.0 i386 1.0.5-7 [33.9 kB] Get:31 http://ftpmaster.internal/ubuntu/ precise/main liblzma2 i386 5.1.1alpha+20110809-2 [95.7 kB] Get:32 http://ftpmaster.internal/ubuntu/ precise/main libselinux1 i386 2.1.0-1 [65.9 kB] Get:33 http://ftpmaster.internal/ubuntu/ precise/main libss2 i386 1.42~WIP-2011-10-09-1ubuntu1 [61.2 kB] Get:34 http://ftpmaster.internal/ubuntu/ precise/main liblockfile1 i386 1.09-3 [9072 B] Get:35 http://ftpmaster.internal/ubuntu/ precise/main liblockfile-bin i386 1.09-3 [12.3 kB] Get:36 http://ftpmaster.internal/ubuntu/ precise/main libffi6 i386 3.0.11~rc1-5 [16.4 kB] Get:37 http://ftpmaster.internal/ubuntu/ precise/main libpcre3 i386 8.12-4 [148 kB] Get:38 http://ftpmaster.internal/ubuntu/ precise/main libp11-kit0 i386 0.6-0ubuntu2 [32.2 kB] Get:39 http://ftpmaster.internal/ubuntu/ precise/main libgnutls26 i386 2.12.11-1 [448 kB] Get:40 http://ftpmaster.internal/ubuntu/ precise/main libgpg-error0 i386 1.10-1ubuntu1 [14.5 kB] Get:41 http://ftpmaster.internal/ubuntu/ precise/main libgcrypt11 i386 1.5.0-3 [281 kB] Get:42 http://ftpmaster.internal/ubuntu/ precise/main libidn11 i386 1.22-3 [111 kB] Get:43 http://ftpmaster.internal/ubuntu/ precise/main libkeyutils1 i386 1.5.2-2 [7716 B] Get:44 http://ftpmaster.internal/ubuntu/ precise/main libgmpxx4ldbl i386 2:5.0.2+dfsg-1ubuntu1 [8650 B] Get:45 http://ftpmaster.internal/ubuntu/ precise/main librtmp0 i386 2.4~20110711.gitc28f1bab-1 [57.7 kB] Get:46 http://ftpmaster.internal/ubuntu/ precise/main xz-utils i386 5.1.1alpha+20110809-2 [87.8 kB] Get:47 http://ftpmaster.internal/ubuntu/ precise/main lockfile-progs i386 0.1.16 [10.1 kB] Get:48 http://ftpmaster.internal/ubuntu/ precise/main netbase all 4.46ubuntu1 [14.8 kB] Get:49 http://ftpmaster.internal/ubuntu/ precise/main iproute i386 20110629-1 [421 kB] Get:50 http://ftpmaster.internal/ubuntu/ precise/main libnih-dbus1 i386 1.0.3-4ubuntu3 [15.2 kB] Get:51 http://ftpmaster.internal/ubuntu/ precise/main libnih1 i386 1.0.3-4ubuntu3 [53.4 kB] Get:52 http://ftpmaster.internal/ubuntu/ precise/main manpages all 3.32-0.2ubuntu1 [577 kB] Get:53 http://ftpmaster.internal/ubuntu/ precise/main dpkg-dev all 1.16.1ubuntu1 [480 kB] Get:54 http://ftpmaster.internal/ubuntu/ precise/main libdpkg-perl all 1.16.1ubuntu1 [180 kB] Get:55 http://ftpmaster.internal/ubuntu/ precise/main fakeroot i386 1.18.1-1 [80.8 kB] Get:56 http://ftpmaster.internal/ubuntu/ precise/main libalgorithm-diff-xs-perl i386 0.04-2 [14.2 kB] Get:57 http://ftpmaster.internal/ubuntu/ precise/main libclass-isa-perl all 0.36-2 [11.7 kB] Get:58 http://ftpmaster.internal/ubuntu/ precise/main libswitch-perl all 2.16-2 [19.2 kB] Get:59 http://ftpmaster.internal/ubuntu/ precise/main manpages-dev all 3.32-0.2ubuntu1 [1653 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 35.7 MB in 1s (19.5 MB/s) (Reading database ... 14145 files and directories currently installed.) Preparing to replace base-files 6.4ubuntu5 (using .../base-files_6.4ubuntu6_i386.deb) ... Unpacking replacement base-files ... Setting up base-files (6.4ubuntu6) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 14145 files and directories currently installed.) Preparing to replace dpkg 1.16.0.3ubuntu5 (using .../dpkg_1.16.1ubuntu1_i386.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.16.1ubuntu1) ... (Reading database ... 14142 files and directories currently installed.) Preparing to replace coreutils 8.5-1ubuntu6 (using .../coreutils_8.13-3ubuntu1_i386.deb) ... Unpacking replacement coreutils ... Setting up coreutils (8.13-3ubuntu1) ... (Reading database ... 14142 files and directories currently installed.) Preparing to replace libcomerr2 1.41.14-1ubuntu3 (using .../libcomerr2_1.42~WIP-2011-10-09-1ubuntu1_i386.deb) ... Unpacking replacement libcomerr2 ... Setting up libcomerr2 (1.42~WIP-2011-10-09-1ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14142 files and directories currently installed.) Preparing to replace e2fslibs 1.41.14-1ubuntu3 (using .../e2fslibs_1.42~WIP-2011-10-09-1ubuntu1_i386.deb) ... Unpacking replacement e2fslibs ... Setting up e2fslibs (1.42~WIP-2011-10-09-1ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14142 files and directories currently installed.) Preparing to replace e2fsprogs 1.41.14-1ubuntu3 (using .../e2fsprogs_1.42~WIP-2011-10-09-1ubuntu1_i386.deb) ... Unpacking replacement e2fsprogs ... Setting up e2fsprogs (1.42~WIP-2011-10-09-1ubuntu1) ... Installing new version of config file /etc/mke2fs.conf ... (Reading database ... 14143 files and directories currently installed.) Preparing to replace grep 2.9-1 (using .../archives/grep_2.9-2_i386.deb) ... Unpacking replacement grep ... Setting up grep (2.9-2) ... (Reading database ... 14143 files and directories currently installed.) Preparing to replace ncurses-bin 5.9-1ubuntu5 (using .../ncurses-bin_5.9-2_i386.deb) ... Unpacking replacement ncurses-bin ... Setting up ncurses-bin (5.9-2) ... (Reading database ... 14143 files and directories currently installed.) Preparing to replace ncurses-base 5.9-1ubuntu5 (using .../ncurses-base_5.9-2_all.deb) ... Unpacking replacement ncurses-base ... Setting up ncurses-base (5.9-2) ... (Reading database ... 14143 files and directories currently installed.) Preparing to replace python-minimal 2.7.2-7ubuntu2 (using .../python-minimal_2.7.2-7ubuntu4_all.deb) ... Unpacking replacement python-minimal ... Setting up python-minimal (2.7.2-7ubuntu4) ... (Reading database ... 14143 files and directories currently installed.) Preparing to replace readline-common 6.2-2ubuntu1 (using .../readline-common_6.2-7_all.deb) ... Unpacking replacement readline-common ... Setting up readline-common (6.2-7) ... (Reading database ... 14143 files and directories currently installed.) Preparing to replace libncursesw5 5.9-1ubuntu5 (using .../libncursesw5_5.9-2_i386.deb) ... Unpacking replacement libncursesw5 ... Preparing to replace libtinfo5 5.9-1ubuntu5 (using .../libtinfo5_5.9-2_i386.deb) ... Unpacking replacement libtinfo5 ... Setting up libtinfo5 (5.9-2) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14143 files and directories currently installed.) Preparing to replace libncurses5 5.9-1ubuntu5 (using .../libncurses5_5.9-2_i386.deb) ... Unpacking replacement libncurses5 ... Setting up libncurses5 (5.9-2) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14143 files and directories currently installed.) Preparing to replace libreadline6 6.2-2ubuntu1 (using .../libreadline6_6.2-7_i386.deb) ... Unpacking replacement libreadline6 ... Setting up libreadline6 (6.2-7) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14143 files and directories currently installed.) Preparing to replace libgomp1 4.6.1-9ubuntu3 (using .../libgomp1_4.6.1-15ubuntu1_i386.deb) ... Unpacking replacement libgomp1 ... Preparing to replace gcc-4.6-base 4.6.1-9ubuntu3 (using .../gcc-4.6-base_4.6.1-15ubuntu1_i386.deb) ... Unpacking replacement gcc-4.6-base ... Setting up gcc-4.6-base (4.6.1-15ubuntu1) ... (Reading database ... 14143 files and directories currently installed.) Preparing to replace libstdc++6 4.6.1-9ubuntu3 (using .../libstdc++6_4.6.1-15ubuntu1_i386.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.6.1-15ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14143 files and directories currently installed.) Preparing to replace cpp-4.6 4.6.1-9ubuntu3 (using .../cpp-4.6_4.6.1-15ubuntu1_i386.deb) ... Unpacking replacement cpp-4.6 ... Preparing to replace libquadmath0 4.6.1-9ubuntu3 (using .../libquadmath0_4.6.1-15ubuntu1_i386.deb) ... Unpacking replacement libquadmath0 ... Preparing to replace libstdc++6-4.6-dev 4.6.1-9ubuntu3 (using .../libstdc++6-4.6-dev_4.6.1-15ubuntu1_i386.deb) ... Unpacking replacement libstdc++6-4.6-dev ... Preparing to replace g++-4.6 4.6.1-9ubuntu3 (using .../g++-4.6_4.6.1-15ubuntu1_i386.deb) ... Unpacking replacement g++-4.6 ... Preparing to replace gcc-4.6 4.6.1-9ubuntu3 (using .../gcc-4.6_4.6.1-15ubuntu1_i386.deb) ... Unpacking replacement gcc-4.6 ... Preparing to replace libgcc1 1:4.6.1-9ubuntu3 (using .../libgcc1_1%3a4.6.1-15ubuntu1_i386.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.6.1-15ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14143 files and directories currently installed.) Preparing to replace libgmp10 2:5.0.1+dfsg-7ubuntu2 (using .../libgmp10_2%3a5.0.2+dfsg-1ubuntu1_i386.deb) ... Unpacking replacement libgmp10 ... Preparing to replace libmpfr4 3.0.1-5 (using .../libmpfr4_3.0.1-6_i386.deb) ... Unpacking replacement libmpfr4 ... Preparing to replace binutils 2.21.53.20110810-0ubuntu3 (using .../binutils_2.21.90.20111004-2ubuntu1_i386.deb) ... Unpacking replacement binutils ... Preparing to replace libusb-0.1-4 2:0.1.12-18 (using .../libusb-0.1-4_2%3a0.1.12-19_i386.deb) ... Unpacking replacement libusb-0.1-4 ... Setting up libusb-0.1-4 (2:0.1.12-19) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14143 files and directories currently installed.) Preparing to replace bzip2 1.0.5-6ubuntu1 (using .../bzip2_1.0.5-7_i386.deb) ... Unpacking replacement bzip2 ... Preparing to replace libbz2-1.0 1.0.5-6ubuntu1 (using .../libbz2-1.0_1.0.5-7_i386.deb) ... Unpacking replacement libbz2-1.0 ... Setting up libbz2-1.0 (1.0.5-7) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14143 files and directories currently installed.) Preparing to replace liblzma2 5.0.0-2 (using .../liblzma2_5.1.1alpha+20110809-2_i386.deb) ... Unpacking replacement liblzma2 ... Setting up liblzma2 (5.1.1alpha+20110809-2) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14143 files and directories currently installed.) Preparing to replace libselinux1 2.0.98-1.1 (using .../libselinux1_2.1.0-1_i386.deb) ... Unpacking replacement libselinux1 ... Setting up libselinux1 (2.1.0-1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14143 files and directories currently installed.) Preparing to replace libss2 1.41.14-1ubuntu3 (using .../libss2_1.42~WIP-2011-10-09-1ubuntu1_i386.deb) ... Unpacking replacement libss2 ... Setting up libss2 (1.42~WIP-2011-10-09-1ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14143 files and directories currently installed.) Preparing to replace liblockfile1 1.08-4 (using .../liblockfile1_1.09-3_i386.deb) ... Unpacking replacement liblockfile1 ... Selecting previously unselected package liblockfile-bin. Unpacking liblockfile-bin (from .../liblockfile-bin_1.09-3_i386.deb) ... Preparing to replace libffi6 3.0.11~rc1-2 (using .../libffi6_3.0.11~rc1-5_i386.deb) ... Unpacking replacement libffi6 ... Preparing to replace libpcre3 8.12-3ubuntu2 (using .../libpcre3_8.12-4_i386.deb) ... Unpacking replacement libpcre3 ... Selecting previously unselected package libp11-kit0. Unpacking libp11-kit0 (from .../libp11-kit0_0.6-0ubuntu2_i386.deb) ... Preparing to replace libgnutls26 2.10.5-1ubuntu3 (using .../libgnutls26_2.12.11-1_i386.deb) ... Unpacking replacement libgnutls26 ... Preparing to replace libgpg-error0 1.10-0.3ubuntu1 (using .../libgpg-error0_1.10-1ubuntu1_i386.deb) ... Unpacking replacement libgpg-error0 ... Preparing to replace libgcrypt11 1.5.0-1 (using .../libgcrypt11_1.5.0-3_i386.deb) ... Unpacking replacement libgcrypt11 ... Preparing to replace libidn11 1.22-2 (using .../libidn11_1.22-3_i386.deb) ... Unpacking replacement libidn11 ... Preparing to replace libkeyutils1 1.4-6 (using .../libkeyutils1_1.5.2-2_i386.deb) ... Unpacking replacement libkeyutils1 ... Preparing to replace libgmpxx4ldbl 2:5.0.1+dfsg-7ubuntu2 (using .../libgmpxx4ldbl_2%3a5.0.2+dfsg-1ubuntu1_i386.deb) ... Unpacking replacement libgmpxx4ldbl ... Preparing to replace librtmp0 2.3-2ubuntu1 (using .../librtmp0_2.4~20110711.gitc28f1bab-1_i386.deb) ... Unpacking replacement librtmp0 ... Preparing to replace xz-utils 5.0.0-2 (using .../xz-utils_5.1.1alpha+20110809-2_i386.deb) ... Unpacking replacement xz-utils ... Setting up xz-utils (5.1.1alpha+20110809-2) ... (Reading database ... 14149 files and directories currently installed.) Preparing to replace lockfile-progs 0.1.15ubuntu1 (using .../lockfile-progs_0.1.16_i386.deb) ... Unpacking replacement lockfile-progs ... Preparing to replace netbase 4.45ubuntu3 (using .../netbase_4.46ubuntu1_all.deb) ... Unpacking replacement netbase ... Preparing to replace iproute 20110315-1build1 (using .../iproute_20110629-1_i386.deb) ... Unpacking replacement iproute ... Preparing to replace libnih-dbus1 1.0.3-4ubuntu2 (using .../libnih-dbus1_1.0.3-4ubuntu3_i386.deb) ... Unpacking replacement libnih-dbus1 ... Preparing to replace libnih1 1.0.3-4ubuntu2 (using .../libnih1_1.0.3-4ubuntu3_i386.deb) ... Unpacking replacement libnih1 ... Preparing to replace manpages 3.27-1ubuntu2 (using .../manpages_3.32-0.2ubuntu1_all.deb) ... Unpacking replacement manpages ... Preparing to replace dpkg-dev 1.16.0.3ubuntu5 (using .../dpkg-dev_1.16.1ubuntu1_all.deb) ... Unpacking replacement dpkg-dev ... Preparing to replace libdpkg-perl 1.16.0.3ubuntu5 (using .../libdpkg-perl_1.16.1ubuntu1_all.deb) ... Unpacking replacement libdpkg-perl ... Preparing to replace fakeroot 1.17-1 (using .../fakeroot_1.18.1-1_i386.deb) ... Unpacking replacement fakeroot ... Preparing to replace libalgorithm-diff-xs-perl 0.04-1build1 (using .../libalgorithm-diff-xs-perl_0.04-2_i386.deb) ... Unpacking replacement libalgorithm-diff-xs-perl ... Preparing to replace libclass-isa-perl 0.36-1 (using .../libclass-isa-perl_0.36-2_all.deb) ... Unpacking replacement libclass-isa-perl ... Preparing to replace libswitch-perl 2.16-1 (using .../libswitch-perl_2.16-2_all.deb) ... Unpacking replacement libswitch-perl ... Preparing to replace manpages-dev 3.27-1ubuntu2 (using .../manpages-dev_3.32-0.2ubuntu1_all.deb) ... Unpacking replacement manpages-dev ... Setting up libncursesw5 (5.9-2) ... Setting up libgomp1 (4.6.1-15ubuntu1) ... Setting up libgmp10 (2:5.0.2+dfsg-1ubuntu1) ... Setting up libmpfr4 (3.0.1-6) ... Setting up cpp-4.6 (4.6.1-15ubuntu1) ... Setting up libquadmath0 (4.6.1-15ubuntu1) ... Setting up binutils (2.21.90.20111004-2ubuntu1) ... Setting up gcc-4.6 (4.6.1-15ubuntu1) ... Setting up bzip2 (1.0.5-7) ... Setting up liblockfile-bin (1.09-3) ... Setting up liblockfile1 (1.09-3) ... Setting up libffi6 (3.0.11~rc1-5) ... Setting up libpcre3 (8.12-4) ... Setting up libp11-kit0 (0.6-0ubuntu2) ... Setting up libgpg-error0 (1.10-1ubuntu1) ... Setting up libgcrypt11 (1.5.0-3) ... Setting up libgnutls26 (2.12.11-1) ... Setting up libidn11 (1.22-3) ... Setting up libkeyutils1 (1.5.2-2) ... Setting up libgmpxx4ldbl (2:5.0.2+dfsg-1ubuntu1) ... Setting up librtmp0 (2.4~20110711.gitc28f1bab-1) ... Setting up lockfile-progs (0.1.16) ... Setting up netbase (4.46ubuntu1) ... Installing new version of config file /etc/protocols ... Installing new version of config file /etc/services ... Setting up iproute (20110629-1) ... Setting up libnih1 (1.0.3-4ubuntu3) ... Setting up libnih-dbus1 (1.0.3-4ubuntu3) ... Setting up manpages (3.32-0.2ubuntu1) ... Setting up libdpkg-perl (1.16.1ubuntu1) ... Setting up dpkg-dev (1.16.1ubuntu1) ... Setting up fakeroot (1.18.1-1) ... Setting up libalgorithm-diff-xs-perl (0.04-2) ... Setting up libclass-isa-perl (0.36-2) ... Setting up libswitch-perl (2.16-2) ... Setting up manpages-dev (3.32-0.2ubuntu1) ... Setting up libstdc++6-4.6-dev (4.6.1-15ubuntu1) ... Setting up g++-4.6 (4.6.1-15ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '9c57014cc51c1b7084e5bcfb36f95e10a549f324', 'i386', 'precise', '--nolog', '--batch', '--archive=ubuntu', '--dist=precise', '-A', '--purpose=PRIMARY', '--architecture=i386', '--comp=universe', 'vcftools_0.1.6-1.dsc'] Initiating build 9c57014cc51c1b7084e5bcfb36f95e10a549f324 with 8 processor cores. Automatic build of vcftools_0.1.6-1 on roseapple by sbuild/i386 1.170.5 Build started at 20111018-1539 ****************************************************************************** vcftools_0.1.6-1.dsc exists in cwd sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 8.0.0), zlib1g-dev sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) Checking for already installed source dependencies... debhelper: missing zlib1g-dev: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper zlib1g-dev Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils file gettext gettext-base groff-base html2text intltool-debian libcroco3 libmagic1 libpipeline1 libunistring0 libxml2 man-db po-debconf Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser libmail-box-perl Recommended packages: curl wget lynx-cur xml-core libmail-sendmail-perl The following NEW packages will be installed: bsdmainutils debhelper file gettext gettext-base groff-base html2text intltool-debian libcroco3 libmagic1 libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev 0 upgraded, 16 newly installed, 0 to remove and 0 not upgraded. Need to get 5592 kB of archives. After this operation, 18.8 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libpipeline1 libmagic1 file bsdmainutils gettext-base groff-base libxml2 man-db html2text libcroco3 libunistring0 gettext intltool-debian po-debconf debhelper zlib1g-dev Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise/main libpipeline1 i386 1.2.0-3 [25.7 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise/main libmagic1 i386 5.04-5ubuntu3 [205 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise/main file i386 5.04-5ubuntu3 [19.8 kB] Get:4 http://ftpmaster.internal/ubuntu/ precise/main bsdmainutils i386 8.2.3 [196 kB] Get:5 http://ftpmaster.internal/ubuntu/ precise/main gettext-base i386 0.18.1.1-3ubuntu1 [56.6 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise/main groff-base i386 1.21-6 [1024 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise/main libxml2 i386 2.7.8.dfsg-5 [662 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise/main man-db i386 2.6.0.2-2 [717 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise/main html2text i386 1.3.2a-15 [101 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise/main libcroco3 i386 0.6.2-1 [92.5 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise/main libunistring0 i386 0.9.3-4 [431 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise/main gettext i386 0.18.1.1-3ubuntu1 [1180 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise/main po-debconf all 1.0.16+nmu1 [212 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise/main debhelper all 8.9.8ubuntu1 [478 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise/main zlib1g-dev i386 1:1.2.3.4.dfsg-3ubuntu3 [160 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5592 kB in 0s (19.1 MB/s) Selecting previously unselected package libpipeline1. (Reading database ... 14162 files and directories currently installed.) Unpacking libpipeline1 (from .../libpipeline1_1.2.0-3_i386.deb) ... Selecting previously unselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_5.04-5ubuntu3_i386.deb) ... Selecting previously unselected package file. Unpacking file (from .../file_5.04-5ubuntu3_i386.deb) ... Selecting previously unselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_8.2.3_i386.deb) ... Selecting previously unselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.18.1.1-3ubuntu1_i386.deb) ... Selecting previously unselected package groff-base. Unpacking groff-base (from .../groff-base_1.21-6_i386.deb) ... Selecting previously unselected package libxml2. Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-5_i386.deb) ... Selecting previously unselected package man-db. Unpacking man-db (from .../man-db_2.6.0.2-2_i386.deb) ... Selecting previously unselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-15_i386.deb) ... Selecting previously unselected package libcroco3. Unpacking libcroco3 (from .../libcroco3_0.6.2-1_i386.deb) ... Selecting previously unselected package libunistring0. Unpacking libunistring0 (from .../libunistring0_0.9.3-4_i386.deb) ... Selecting previously unselected package gettext. Unpacking gettext (from .../gettext_0.18.1.1-3ubuntu1_i386.deb) ... Selecting previously unselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously unselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ... Selecting previously unselected package debhelper. Unpacking debhelper (from .../debhelper_8.9.8ubuntu1_all.deb) ... Selecting previously unselected package zlib1g-dev. Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3ubuntu3_i386.deb) ... Setting up libpipeline1 (1.2.0-3) ... Setting up libmagic1 (5.04-5ubuntu3) ... Setting up file (5.04-5ubuntu3) ... Setting up bsdmainutils (8.2.3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up gettext-base (0.18.1.1-3ubuntu1) ... Setting up groff-base (1.21-6) ... Setting up libxml2 (2.7.8.dfsg-5) ... Setting up man-db (2.6.0.2-2) ... Building database of manual pages ... Setting up html2text (1.3.2a-15) ... Setting up libcroco3 (0.6.2-1) ... Setting up libunistring0 (0.9.3-4) ... Setting up gettext (0.18.1.1-3ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu1) ... Setting up debhelper (8.9.8ubuntu1) ... Setting up zlib1g-dev (1:1.2.3.4.dfsg-3ubuntu3) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.13-20ubuntu5 make_3.81-8.1ubuntu1 dpkg-dev_1.16.1ubuntu1 gcc-4.6_4.6.1-15ubuntu1 g++-4.6_4.6.1-15ubuntu1 binutils_2.21.90.20111004-2ubuntu1 libstdc++6-4.6-dev_4.6.1-15ubuntu1 libstdc++6_4.6.1-15ubuntu1 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Sun Jul 31 12:39:43 2011 UTC using DSA key ID BE9D5339 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./vcftools_0.1.6-1.dsc dpkg-source: info: extracting vcftools in vcftools-0.1.6 dpkg-source: info: unpacking vcftools_0.1.6.orig.tar.gz dpkg-source: info: unpacking vcftools_0.1.6-1.debian.tar.gz dpkg-source: info: applying make.patch dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -D_FORTIFY_SOURCE=2 -Wformat -Wformat-security -Werror=format-security dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -D_FORTIFY_SOURCE=2 -Wformat -Wformat-security -Werror=format-security dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): -Wl,-Bsymbolic-functions -Wl,-z,relro dpkg-buildpackage: source package vcftools dpkg-buildpackage: source version 0.1.6-1 dpkg-source --before-build vcftools-0.1.6 dpkg-buildpackage: host architecture i386 /usr/bin/fakeroot debian/rules clean dh clean dh_testdir dh_auto_clean debian/rules override_dh_clean make[1]: Entering directory `/build/buildd/vcftools-0.1.6' dh_clean # [ -r Makefile ] && make clean ? find . -name '.svn' -a -type d| xargs -r rm -rf find . -name "*.pdf" | xargs -r rm make[1]: Leaving directory `/build/buildd/vcftools-0.1.6' debian/rules build dh build dh_testdir dh_auto_configure dh_auto_build make[1]: Entering directory `/build/buildd/vcftools-0.1.6' make[2]: Entering directory `/build/buildd/vcftools-0.1.6/cpp' g++ -O2 -Wall -Wextra vcftools.cpp vcf_file.cpp vcf_entry.cpp vcf_entry_getters.cpp vcf_entry_setters.cpp vcf_file_filters.cpp vcf_file_output.cpp vcf_file_format_convert.cpp vcf_file_diff.cpp parameters.cpp output_log.cpp -o vcftools -lz vcf_file_output.cpp: In member function 'void vcf_file::output_PCA(const string&, bool, int)': vcf_file_output.cpp:2634:6: warning: parameter 'use_normalisation' set but not used [-Wunused-but-set-parameter] vcf_file_output.cpp:2634:6: warning: parameter 'SNP_loadings_N_PCs' set but not used [-Wunused-but-set-parameter] vcf_file_format_convert.cpp: In member function 'void vcf_file::output_as_012_matrix(const string&)': vcf_file_format_convert.cpp:453:7: warning: variable 'phase' set but not used [-Wunused-but-set-variable] cp /build/buildd/vcftools-0.1.6/cpp/vcftools /build/buildd/vcftools-0.1.6//bin/vcftools make[2]: Leaving directory `/build/buildd/vcftools-0.1.6/cpp' make[2]: Entering directory `/build/buildd/vcftools-0.1.6/perl' make[2]: Leaving directory `/build/buildd/vcftools-0.1.6/perl' make[1]: Leaving directory `/build/buildd/vcftools-0.1.6' dh_auto_test /usr/bin/fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_installdirs debian/rules override_dh_auto_install make[1]: Entering directory `/build/buildd/vcftools-0.1.6' mkdir -p debian/vcftools/usr/bin cp bin/* debian/vcftools/usr/bin mkdir -p debian/vcftools/usr/share/perl5 cp lib/* debian/vcftools/usr/share/perl5 cp perl/VcfStats.pm debian/vcftools/usr/share/perl5 cp cpp/vcftools debian/vcftools/usr/bin mkdir -p debian/vcftools/usr/share/doc/vcftools cp -a examples debian/vcftools/usr/share/doc/vcftools dh_installchangelogs perl/ChangeLog dh_auto_install make[2]: Entering directory `/build/buildd/vcftools-0.1.6' make[3]: Entering directory `/build/buildd/vcftools-0.1.6/cpp' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/build/buildd/vcftools-0.1.6/cpp' make[3]: Entering directory `/build/buildd/vcftools-0.1.6/perl' make[3]: Leaving directory `/build/buildd/vcftools-0.1.6/perl' make[2]: Leaving directory `/build/buildd/vcftools-0.1.6' make[1]: Leaving directory `/build/buildd/vcftools-0.1.6' dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_installcatalogs dh_installcron dh_installdebconf dh_installemacsen dh_installifupdown dh_installinfo dh_installinit dh_installmenu dh_installmime dh_installmodules dh_installlogcheck dh_installlogrotate dh_installpam dh_installppp dh_installudev dh_installwm dh_installxfonts dh_installgsettings dh_bugfiles dh_ucf dh_lintian dh_gconf dh_icons dh_perl dh_usrlocal dh_link dh_compress dh_fixperms dh_strip dh_strip debug symbol extraction: all non-arch-all packages for this build platform i386: vcftools dh_strip debug symbol extraction: packages to act on: vcftools dh_strip debug symbol extraction: ignored packages: vcftools is already stripped, ignoring dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb INFO: pkgstriptranslations version 104 pkgstriptranslations: processing control file: ./debian/vcftools/DEBIAN/control, package vcftools, directory ./debian/vcftools pkgstriptranslations: vcftools does not contain translations, skipping pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/vcftools/DEBIAN/control, package vcftools, directory debian/vcftools .. removing usr/share/doc/vcftools/changelog.gz dpkg-deb: warning: 'debian/vcftools/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `vcftools' in `../vcftools_0.1.6-1_i386.deb'. dpkg-genchanges -b -mUbuntu/amd64 Build Daemon >../vcftools_0.1.6-1_i386.changes dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build vcftools-0.1.6 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20111018-1540 chroot-autobuild/build/buildd/vcftools_0.1.6-1_i386.deb: new debian package, version 2.0. size 311034 bytes: control archive= 2434 bytes. 759 bytes, 16 lines control 4552 bytes, 65 lines md5sums Package: vcftools Version: 0.1.6-1 Architecture: i386 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 853 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0), zlib1g (>= 1:1.2.0.2), perl Recommends: tabix Section: science Priority: extra Homepage: http://vcftools.sourceforge.net Description: designed for working with VCF files VCFtools is a program package designed for working with VCF files, such as those generated by the 1000 Genomes Project. The aim of VCFtools is to provide methods for working with VCF files: validating, merging, comparing and calculate some basic population genetic statistics. chroot-autobuild/build/buildd/vcftools_0.1.6-1_i386.deb: drwxr-xr-x root/root 0 2011-10-18 15:40 ./ drwxr-xr-x root/root 0 2011-10-18 15:40 ./usr/ drwxr-xr-x root/root 0 2011-10-18 15:40 ./usr/bin/ -rwxr-xr-x root/root 4874 2011-10-18 15:40 ./usr/bin/vcf-stats -rwxr-xr-x root/root 5969 2011-10-18 15:40 ./usr/bin/vcf-convert -rwxr-xr-x root/root 2732 2011-10-18 15:40 ./usr/bin/fill-aa -rwxr-xr-x root/root 28133 2011-10-18 15:40 ./usr/bin/vcf-annotate -rwxr-xr-x root/root 1261 2011-10-18 15:40 ./usr/bin/fill-an-ac -rwxr-xr-x root/root 19239 2011-10-18 15:40 ./usr/bin/vcf-isec -rwxr-xr-x root/root 2392 2011-10-18 15:40 ./usr/bin/vcf-to-tab -rwxr-xr-x root/root 6518 2011-10-18 15:40 ./usr/bin/vcf-subset -rwxr-xr-x root/root 9046 2011-10-18 15:40 ./usr/bin/vcf-query -rwxr-xr-x root/root 3258 2011-10-18 15:40 ./usr/bin/vcf-validator -rwxr-xr-x root/root 33783 2011-10-18 15:40 ./usr/bin/vcf-compare -rwxr-xr-x root/root 18412 2011-10-18 15:40 ./usr/bin/vcf-merge -rwxr-xr-x root/root 522112 2011-10-18 15:40 ./usr/bin/vcftools -rwxr-xr-x root/root 7831 2011-10-18 15:40 ./usr/bin/vcf-concat -rwxr-xr-x root/root 5463 2011-10-18 15:40 ./usr/bin/fill-rsIDs -rwxr-xr-x root/root 1506 2011-10-18 15:40 ./usr/bin/vcf-sort drwxr-xr-x root/root 0 2011-10-18 15:40 ./usr/share/ drwxr-xr-x root/root 0 2011-10-18 15:40 ./usr/share/doc/ drwxr-xr-x root/root 0 2011-10-18 15:40 ./usr/share/doc/vcftools/ drwxr-xr-x root/root 0 2011-10-18 15:40 ./usr/share/doc/vcftools/examples/ -rw-r--r-- root/root 674 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/concat-b.vcf -rw-r--r-- root/root 638 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/shuffle-test.vcf -rw-r--r-- root/root 1229 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/subset.vcf -rw-r--r-- root/root 1262 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/annotate.out -rw-r--r-- root/root 255 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/query-test.out -rw-r--r-- root/root 636 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/cmp-test-b.vcf -rw-r--r-- root/root 2182 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/valid-4.0.vcf -rw-r--r-- root/root 1080 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/concat-a.vcf -rw-r--r-- root/root 1612 2011-07-09 13:34 ./usr/share/doc/vcftools/examples/valid-3.3.vcf -rw-r--r-- root/root 972 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/concat-c.vcf -rw-r--r-- root/root 2086 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/invalid-4.0.vcf -rw-r--r-- root/root 957 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/merge-test-b.vcf -rw-r--r-- root/root 2805 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/cmp-test.out -rw-r--r-- root/root 1974 2011-07-09 13:34 ./usr/share/doc/vcftools/examples/concat.out -rw-r--r-- root/root 520 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/cmp-test-b-3.3.vcf -rw-r--r-- root/root 1050 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/isec-n2-test.vcf.out -rw-r--r-- root/root 638 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/cmp-test-a.vcf -rw-r--r-- root/root 931 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/subset.indels.out -rw-r--r-- root/root 522 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/subset.SNPs.out -rw-r--r-- root/root 953 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/merge-test-a.vcf -rw-r--r-- root/root 456 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/valid-4.0.vcf.stats.gz -rwxr-xr-x root/root 1439 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/perl-api-1.pl -rw-r--r-- root/root 2283 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/merge-test.vcf.out -rw-r--r-- root/root 2858 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/annotate2.out -rw-r--r-- root/root 522 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/cmp-test-a-3.3.vcf -rw-r--r-- root/root 1609 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/annotate-test.vcf -rw-r--r-- root/root 735 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/merge-test-c.vcf -rw-r--r-- root/root 131 2011-07-09 13:33 ./usr/share/doc/vcftools/examples/annotate.txt -rw-r--r-- root/root 1102 2011-07-10 16:06 ./usr/share/doc/vcftools/copyright -rw-r--r-- root/root 282 2011-07-31 12:35 ./usr/share/doc/vcftools/changelog.Debian.gz drwxr-xr-x root/root 0 2011-10-18 15:40 ./usr/share/man/ drwxr-xr-x root/root 0 2011-10-18 15:40 ./usr/share/man/man1/ -rw-r--r-- root/root 241 2011-10-18 15:40 ./usr/share/man/man1/fill-an-ac.1.gz -rw-r--r-- root/root 280 2011-10-18 15:40 ./usr/share/man/man1/vcf-to-tab.1.gz -rw-r--r-- root/root 307 2011-10-18 15:40 ./usr/share/man/man1/vcf-validator.1.gz -rw-r--r-- root/root 685 2011-10-18 15:40 ./usr/share/man/man1/vcf-stats.1.gz -rw-r--r-- root/root 1281 2011-10-18 15:40 ./usr/share/man/man1/vcf-annotate.1.gz -rw-r--r-- root/root 389 2011-10-18 15:40 ./usr/share/man/man1/vcf-convert.1.gz -rw-r--r-- root/root 500 2011-10-18 15:40 ./usr/share/man/man1/vcf-query.1.gz -rw-r--r-- root/root 558 2011-10-18 15:40 ./usr/share/man/man1/vcf-subset.1.gz -rw-r--r-- root/root 852 2011-10-18 15:40 ./usr/share/man/man1/vcf-compare.1.gz -rw-r--r-- root/root 518 2011-10-18 15:40 ./usr/share/man/man1/vcf-concat.1.gz -rw-r--r-- root/root 280 2011-10-18 15:40 ./usr/share/man/man1/fill-rsIDs.1.gz -rw-r--r-- root/root 6157 2011-10-18 15:40 ./usr/share/man/man1/vcftools.1.gz -rw-r--r-- root/root 254 2011-10-18 15:40 ./usr/share/man/man1/vcf-sort.1.gz -rw-r--r-- root/root 272 2011-10-18 15:40 ./usr/share/man/man1/fill-aa.1.gz -rw-r--r-- root/root 956 2011-10-18 15:40 ./usr/share/man/man1/vcf-isec.1.gz -rw-r--r-- root/root 599 2011-10-18 15:40 ./usr/share/man/man1/vcf-merge.1.gz drwxr-xr-x root/root 0 2011-10-18 15:40 ./usr/share/perl5/ -rw-r--r-- root/root 81443 2011-10-18 15:40 ./usr/share/perl5/Vcf.pm -rw-r--r-- root/root 18147 2011-10-18 15:40 ./usr/share/perl5/VcfStats.pm -rw-r--r-- root/root 6133 2011-10-18 15:40 ./usr/share/perl5/FaSlice.pm vcftools_0.1.6-1_i386.changes: Format: 1.8 Date: Sun, 10 Jul 2011 15:18:25 +0200 Source: vcftools Binary: vcftools Architecture: i386 Version: 0.1.6-1 Distribution: precise Urgency: low Maintainer: Ubuntu/amd64 Build Daemon Changed-By: Thorsten Alteholz Description: vcftools - designed for working with VCF files Closes: 633142 Changes: vcftools (0.1.6-1) unstable; urgency=low . [ Thorsten ] * Initial release (Closes: #633142). . [ Steffen as the package's sponsor ] * Added README.source * Removed Andreas and myself from uploaders * Followed FTPmaster's advice to remove the source-less .pdf from source tree Checksums-Sha1: 56333b1623626b3c8d26e428bb9ae0a3e5e06c82 311034 vcftools_0.1.6-1_i386.deb Checksums-Sha256: 75e0c88831acff3365725d4041873c9e9aff9ac52ae86c48f00ba44f6c077f6d 311034 vcftools_0.1.6-1_i386.deb Files: 24d4a41ec25300c01652910c4b195544 311034 science extra vcftools_0.1.6-1_i386.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/vcftools-0.1.6 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --purge intltool-debian groff-base gettext file zlib1g-dev html2text gettext-base debhelper libunistring0 po-debconf libcroco3 libmagic1 libpipeline1 libxml2 bsdmainutils man-db (Reading database ... 15332 files and directories currently installed.) Removing zlib1g-dev ... Removing debhelper ... Removing po-debconf ... Removing man-db ... Purging configuration files for man-db ... Removing catpages as well as /var/cache/man hierarchy. Removing intltool-debian ... Removing groff-base ... Purging configuration files for groff-base ... Removing gettext ... Removing file ... Removing html2text ... Purging configuration files for html2text ... Removing gettext-base ... Removing libunistring0 ... Purging configuration files for libunistring0 ... Removing libcroco3 ... Purging configuration files for libcroco3 ... Removing libmagic1 ... Purging configuration files for libmagic1 ... Removing libpipeline1 ... Purging configuration files for libpipeline1 ... Removing libxml2 ... Purging configuration files for libxml2 ... Removing bsdmainutils ... Purging configuration files for bsdmainutils ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20111018-1540 Build needed 00:00:24, 3844k disk space Can't open average time db /var/debbuild/avg-build-times Can't open average space db /var/debbuild/avg-build-space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '9c57014cc51c1b7084e5bcfb36f95e10a549f324'] Scanning for processes to kill in build /home/buildd/build-9c57014cc51c1b7084e5bcfb36f95e10a549f324/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '9c57014cc51c1b7084e5bcfb36f95e10a549f324'] Unmounting chroot for build 9c57014cc51c1b7084e5bcfb36f95e10a549f324... none /home/buildd/build-9c57014cc51c1b7084e5bcfb36f95e10a549f324/chroot-autobuild/proc proc rw,relatime 0 0 none /home/buildd/build-9c57014cc51c1b7084e5bcfb36f95e10a549f324/chroot-autobuild/dev/pts devpts rw,relatime 0 0 none /home/buildd/build-9c57014cc51c1b7084e5bcfb36f95e10a549f324/chroot-autobuild/sys sysfs rw,relatime 0 0 none /home/buildd/build-9c57014cc51c1b7084e5bcfb36f95e10a549f324/chroot-autobuild/dev/shm tmpfs rw,relatime 0 0 RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '9c57014cc51c1b7084e5bcfb36f95e10a549f324'] Removing build 9c57014cc51c1b7084e5bcfb36f95e10a549f324