RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '101a260143c6b8d2092cae8e6d7b3b13e1c88c93', '/home/buildd/filecache-default/de508fd957bfd10595bd9c4707931091ac983cd6'] Synching the system clock with the buildd NTP service... 3 Dec 13:34:43 ntpdate[7497]: adjust time server 10.211.37.1 offset -0.000703 sec Unpacking chroot for build 101a260143c6b8d2092cae8e6d7b3b13e1c88c93 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '101a260143c6b8d2092cae8e6d7b3b13e1c88c93'] Mounting chroot for build 101a260143c6b8d2092cae8e6d7b3b13e1c88c93 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '101a260143c6b8d2092cae8e6d7b3b13e1c88c93', 'deb http://ftpmaster.internal/ubuntu precise main universe'] Overriding sources.list in build-101a260143c6b8d2092cae8e6d7b3b13e1c88c93 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '101a260143c6b8d2092cae8e6d7b3b13e1c88c93', 'armhf'] Updating debian chroot for build 101a260143c6b8d2092cae8e6d7b3b13e1c88c93 Ign http://ftpmaster.internal precise InRelease Get:1 http://ftpmaster.internal precise Release.gpg [198 B] Get:2 http://ftpmaster.internal precise Release [49.6 kB] Ign http://archive-team.internal precise InRelease Ign http://archive-team.internal precise Release.gpg Get:3 http://archive-team.internal precise Release [463 B] Ign http://archive-team.internal precise/main TranslationIndex Get:4 http://archive-team.internal precise/main armhf Packages [1664 kB] Get:5 http://ftpmaster.internal precise/main armhf Packages [1109 kB] Get:6 http://ftpmaster.internal precise/universe armhf Packages [2532 kB] Ign http://archive-team.internal precise/main Translation-en Get:7 http://ftpmaster.internal precise/main TranslationIndex [3502 B] Get:8 http://ftpmaster.internal precise/universe TranslationIndex [2712 B] Get:9 http://ftpmaster.internal precise/main Translation-en [713 kB] Get:10 http://ftpmaster.internal precise/universe Translation-en [3300 kB] Fetched 9375 kB in 20s (463 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: libdb5.1 python2.7-minimal 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2080 kB of archives. After this operation, 1024 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! libdb5.1 python2.7-minimal Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise/main libdb5.1 armhf 5.1.25-11build1 [594 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise/main python2.7-minimal armhf 2.7.2-8build1 [1486 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2080 kB in 0s (3972 kB/s) (Reading database ... 10975 files and directories currently installed.) Preparing to replace libdb5.1 5.1.25-11 (using .../libdb5.1_5.1.25-11build1_armhf.deb) ... Unpacking replacement libdb5.1 ... Setting up libdb5.1 (5.1.25-11build1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 10975 files and directories currently installed.) Preparing to replace python2.7-minimal 2.7.2-8 (using .../python2.7-minimal_2.7.2-8build1_armhf.deb) ... Unpacking replacement python2.7-minimal ... Setting up python2.7-minimal (2.7.2-8build1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '101a260143c6b8d2092cae8e6d7b3b13e1c88c93', 'armhf', 'precise', '--nolog', '--batch', '--archive=ubuntu', '--dist=precise', '--purpose=PRIMARY', '--architecture=armhf', '--comp=universe', 'vcftools_0.1.7-1.dsc'] Initiating build 101a260143c6b8d2092cae8e6d7b3b13e1c88c93 with 2 processor cores. Automatic build of vcftools_0.1.7-1 on ain by sbuild/armhf 1.170.5 Build started at 20111203-1336 ****************************************************************************** vcftools_0.1.7-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 8.0.0), zlib1g-dev Checking for already installed source dependencies... debhelper: missing zlib1g-dev: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper zlib1g-dev Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils file gettext gettext-base groff-base html2text intltool-debian libcroco3 libgettextpo0 libmagic1 libpipeline1 libunistring0 libxml2 man-db po-debconf Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser libmail-box-perl Recommended packages: curl wget lynx-cur xml-core libmail-sendmail-perl The following NEW packages will be installed: bsdmainutils debhelper file gettext gettext-base groff-base html2text intltool-debian libcroco3 libgettextpo0 libmagic1 libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev 0 upgraded, 17 newly installed, 0 to remove and 0 not upgraded. Need to get 5238 kB of archives. After this operation, 15.6 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libpipeline1 libxml2 libcroco3 libunistring0 libgettextpo0 libmagic1 file bsdmainutils gettext-base groff-base man-db html2text gettext intltool-debian po-debconf debhelper zlib1g-dev Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise/main libpipeline1 armhf 1.2.0-5 [20.7 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise/main libxml2 armhf 2.7.8.dfsg-5ubuntu1 [550 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise/main libcroco3 armhf 0.6.2-2 [80.9 kB] Get:4 http://ftpmaster.internal/ubuntu/ precise/main libunistring0 armhf 0.9.3-5 [393 kB] Get:5 http://ftpmaster.internal/ubuntu/ precise/main libgettextpo0 armhf 0.18.1.1-5ubuntu3 [99.4 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise/main libmagic1 armhf 5.09-2 [213 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise/main file armhf 5.09-2 [19.0 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise/main bsdmainutils armhf 8.2.3 [193 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise/main gettext-base armhf 0.18.1.1-5ubuntu3 [54.7 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise/main groff-base armhf 1.21-6 [926 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise/main man-db armhf 2.6.0.2-3 [673 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise/main html2text armhf 1.3.2a-15 [85.8 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise/main gettext armhf 0.18.1.1-5ubuntu3 [1050 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise/main po-debconf armhf 1.0.16+nmu1ubuntu1 [211 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise/main debhelper armhf 8.9.9ubuntu1 [477 kB] Get:17 http://ftpmaster.internal/ubuntu/ precise/main zlib1g-dev armhf 1:1.2.3.4.dfsg-3ubuntu4 [158 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5238 kB in 1s (3937 kB/s) Selecting previously unselected package libpipeline1. (Reading database ... 10975 files and directories currently installed.) Unpacking libpipeline1 (from .../libpipeline1_1.2.0-5_armhf.deb) ... Selecting previously unselected package libxml2. Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-5ubuntu1_armhf.deb) ... Selecting previously unselected package libcroco3. Unpacking libcroco3 (from .../libcroco3_0.6.2-2_armhf.deb) ... Selecting previously unselected package libunistring0. Unpacking libunistring0 (from .../libunistring0_0.9.3-5_armhf.deb) ... Selecting previously unselected package libgettextpo0. Unpacking libgettextpo0 (from .../libgettextpo0_0.18.1.1-5ubuntu3_armhf.deb) ... Selecting previously unselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_5.09-2_armhf.deb) ... Selecting previously unselected package file. Unpacking file (from .../archives/file_5.09-2_armhf.deb) ... Selecting previously unselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_8.2.3_armhf.deb) ... Selecting previously unselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.18.1.1-5ubuntu3_armhf.deb) ... Selecting previously unselected package groff-base. Unpacking groff-base (from .../groff-base_1.21-6_armhf.deb) ... Selecting previously unselected package man-db. Unpacking man-db (from .../man-db_2.6.0.2-3_armhf.deb) ... Selecting previously unselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-15_armhf.deb) ... Selecting previously unselected package gettext. Unpacking gettext (from .../gettext_0.18.1.1-5ubuntu3_armhf.deb) ... Selecting previously unselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously unselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1ubuntu1_armhf.deb) ... Selecting previously unselected package debhelper. Unpacking debhelper (from .../debhelper_8.9.9ubuntu1_armhf.deb) ... Selecting previously unselected package zlib1g-dev. Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3ubuntu4_armhf.deb) ... Setting up libpipeline1 (1.2.0-5) ... Setting up libxml2 (2.7.8.dfsg-5ubuntu1) ... Setting up libcroco3 (0.6.2-2) ... Setting up libunistring0 (0.9.3-5) ... Setting up libgettextpo0 (0.18.1.1-5ubuntu3) ... Setting up libmagic1 (5.09-2) ... Setting up file (5.09-2) ... Setting up bsdmainutils (8.2.3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up gettext-base (0.18.1.1-5ubuntu3) ... Setting up groff-base (1.21-6) ... Setting up man-db (2.6.0.2-3) ... Building database of manual pages ... Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-5ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu1ubuntu1) ... Setting up debhelper (8.9.9ubuntu1) ... Setting up zlib1g-dev (1:1.2.3.4.dfsg-3ubuntu4) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.13-20ubuntu8 make_3.81-8.1ubuntu1 dpkg-dev_1.16.1.2ubuntu3 gcc-4.6_4.6.2-5ubuntu1 g++-4.6_4.6.2-5ubuntu1 binutils_2.22-1ubuntu1 libstdc++6-4.6-dev_4.6.2-5ubuntu1 libstdc++6_4.6.2-5ubuntu1 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Wed Oct 19 17:56:35 2011 UTC using DSA key ID 54B99890 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./vcftools_0.1.7-1.dsc dpkg-source: info: extracting vcftools in vcftools-0.1.7 dpkg-source: info: unpacking vcftools_0.1.7.orig.tar.gz dpkg-source: info: unpacking vcftools_0.1.7-1.debian.tar.gz dpkg-source: info: applying make.patch dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): -D_FORTIFY_SOURCE=2 dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): -Wl,-Bsymbolic-functions -Wl,-z,relro dpkg-buildpackage: source package vcftools dpkg-buildpackage: source version 0.1.7-1 dpkg-source --before-build vcftools-0.1.7 dpkg-buildpackage: host architecture armhf /usr/bin/fakeroot debian/rules clean dh clean dh_testdir dh_auto_clean make[1]: Entering directory `/build/buildd/vcftools-0.1.7' make[2]: Entering directory `/build/buildd/vcftools-0.1.7/cpp' make[2]: Leaving directory `/build/buildd/vcftools-0.1.7/cpp' make[2]: Entering directory `/build/buildd/vcftools-0.1.7/perl' make[2]: Leaving directory `/build/buildd/vcftools-0.1.7/perl' make[1]: Leaving directory `/build/buildd/vcftools-0.1.7' debian/rules override_dh_clean make[1]: Entering directory `/build/buildd/vcftools-0.1.7' dh_clean # [ -r Makefile ] && make clean ? make[1]: Leaving directory `/build/buildd/vcftools-0.1.7' debian/rules build dh build dh_testdir dh_auto_configure dh_auto_build make[1]: Entering directory `/build/buildd/vcftools-0.1.7' make[2]: Entering directory `/build/buildd/vcftools-0.1.7/cpp' g++ -O2 -Wall -Wextra vcftools.cpp vcf_file.cpp vcf_entry.cpp vcf_entry_getters.cpp vcf_entry_setters.cpp vcf_file_filters.cpp vcf_file_output.cpp vcf_file_format_convert.cpp vcf_file_diff.cpp parameters.cpp vcf_file_index.cpp output_log.cpp -o vcftools -lz vcf_file.cpp: In member function 'void vcf_file::scan_file(const string&, const string&, bool)': vcf_file.cpp:142:18: warning: comparison is always false due to limited range of data type [-Wtype-limits] vcf_file_output.cpp: In member function 'void vcf_file::output_PCA(const string&, bool, int)': vcf_file_output.cpp:2780:6: warning: parameter 'use_normalisation' set but not used [-Wunused-but-set-parameter] vcf_file_output.cpp:2780:6: warning: parameter 'SNP_loadings_N_PCs' set but not used [-Wunused-but-set-parameter] vcf_file_format_convert.cpp: In member function 'void vcf_file::output_as_012_matrix(const string&)': vcf_file_format_convert.cpp:453:7: warning: variable 'phase' set but not used [-Wunused-but-set-variable] cp /build/buildd/vcftools-0.1.7/cpp/vcftools /build/buildd/vcftools-0.1.7//bin/vcftools make[2]: Leaving directory `/build/buildd/vcftools-0.1.7/cpp' make[2]: Entering directory `/build/buildd/vcftools-0.1.7/perl' make[2]: Leaving directory `/build/buildd/vcftools-0.1.7/perl' make[1]: Leaving directory `/build/buildd/vcftools-0.1.7' dh_auto_test /usr/bin/fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install make[1]: Entering directory `/build/buildd/vcftools-0.1.7' mkdir -p debian/vcftools/usr/bin cp bin/* debian/vcftools/usr/bin mkdir -p debian/vcftools/usr/share/perl5 cp lib/* debian/vcftools/usr/share/perl5 cp perl/VcfStats.pm debian/vcftools/usr/share/perl5 cp cpp/vcftools debian/vcftools/usr/bin mkdir -p debian/vcftools/usr/share/doc/vcftools cp -a examples debian/vcftools/usr/share/doc/vcftools dh_installchangelogs perl/ChangeLog dh_auto_install make[2]: Entering directory `/build/buildd/vcftools-0.1.7' make[3]: Entering directory `/build/buildd/vcftools-0.1.7/cpp' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/build/buildd/vcftools-0.1.7/cpp' make[3]: Entering directory `/build/buildd/vcftools-0.1.7/perl' make[3]: Leaving directory `/build/buildd/vcftools-0.1.7/perl' make[2]: Leaving directory `/build/buildd/vcftools-0.1.7' make[1]: Leaving directory `/build/buildd/vcftools-0.1.7' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_installcatalogs -a dh_installcron -a dh_installdebconf -a dh_installemacsen -a dh_installifupdown -a dh_installinfo -a dh_installinit -a dh_installmenu -a dh_installmime -a dh_installmodules -a dh_installlogcheck -a dh_installlogrotate -a dh_installpam -a dh_installppp -a dh_installudev -a dh_installwm -a dh_installxfonts -a dh_installgsettings -a dh_bugfiles -a dh_ucf -a dh_lintian -a dh_gconf -a dh_icons -a dh_perl -a dh_usrlocal -a dh_link -a dh_compress -a dh_fixperms -a dh_strip -a dh_strip debug symbol extraction: all non-arch-all packages for this build platform armhf: vcftools dh_strip debug symbol extraction: packages to act on: vcftools dh_strip debug symbol extraction: ignored packages: vcftools is already stripped, ignoring dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/vcftools/usr/bin/vcftools contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 109 pkgstriptranslations: processing vcftools (in debian/vcftools); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/vcftools/DEBIAN/control, package vcftools, directory debian/vcftools .. removing usr/share/doc/vcftools/changelog.gz dpkg-deb: warning: 'debian/vcftools/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `vcftools' in `../vcftools_0.1.7-1_armhf.deb'. dpkg-genchanges -B -mUbuntu/armel Build Daemon >../vcftools_0.1.7-1_armhf.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build vcftools-0.1.7 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20111203-1340 chroot-autobuild/build/buildd/vcftools_0.1.7-1_armhf.deb: new debian package, version 2.0. size 296320 bytes: control archive= 2456 bytes. 760 bytes, 16 lines control 4659 bytes, 66 lines md5sums Package: vcftools Version: 0.1.7-1 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 706 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.4.0), libstdc++6 (>= 4.4.0), zlib1g (>= 1:1.2.0.2), perl Recommends: tabix Section: science Priority: extra Homepage: http://vcftools.sourceforge.net Description: designed for working with VCF files VCFtools is a program package designed for working with VCF files, such as those generated by the 1000 Genomes Project. The aim of VCFtools is to provide methods for working with VCF files: validating, merging, comparing and calculate some basic population genetic statistics. chroot-autobuild/build/buildd/vcftools_0.1.7-1_armhf.deb: drwxr-xr-x root/root 0 2011-12-03 13:39 ./ drwxr-xr-x root/root 0 2011-12-03 13:39 ./usr/ drwxr-xr-x root/root 0 2011-12-03 13:39 ./usr/bin/ -rwxr-xr-x root/root 5969 2011-12-03 13:39 ./usr/bin/vcf-convert -rwxr-xr-x root/root 20325 2011-12-03 13:39 ./usr/bin/vcf-isec -rwxr-xr-x root/root 2732 2011-12-03 13:39 ./usr/bin/fill-aa -rwxr-xr-x root/root 9046 2011-12-03 13:39 ./usr/bin/vcf-query -rwxr-xr-x root/root 3258 2011-12-03 13:39 ./usr/bin/vcf-validator -rwxr-xr-x root/root 2392 2011-12-03 13:39 ./usr/bin/vcf-to-tab -rwxr-xr-x root/root 19509 2011-12-03 13:39 ./usr/bin/vcf-merge -rwxr-xr-x root/root 1261 2011-12-03 13:39 ./usr/bin/fill-an-ac -rwxr-xr-x root/root 37603 2011-12-03 13:39 ./usr/bin/vcf-annotate -rwxr-xr-x root/root 41477 2011-12-03 13:39 ./usr/bin/vcf-compare -rwxr-xr-x root/root 7831 2011-12-03 13:39 ./usr/bin/vcf-concat -rwxr-xr-x root/root 6927 2011-12-03 13:39 ./usr/bin/vcf-subset -rwxr-xr-x root/root 1506 2011-12-03 13:39 ./usr/bin/vcf-sort -rwxr-xr-x root/root 350140 2011-12-03 13:39 ./usr/bin/vcftools -rwxr-xr-x root/root 4874 2011-12-03 13:39 ./usr/bin/vcf-stats drwxr-xr-x root/root 0 2011-12-03 13:39 ./usr/share/ drwxr-xr-x root/root 0 2011-12-03 13:39 ./usr/share/perl5/ -rw-r--r-- root/root 6148 2011-12-03 13:39 ./usr/share/perl5/FaSlice.pm -rw-r--r-- root/root 84329 2011-12-03 13:39 ./usr/share/perl5/Vcf.pm -rw-r--r-- root/root 18147 2011-12-03 13:39 ./usr/share/perl5/VcfStats.pm drwxr-xr-x root/root 0 2011-12-03 13:39 ./usr/share/doc/ drwxr-xr-x root/root 0 2011-12-03 13:40 ./usr/share/doc/vcftools/ -rw-r--r-- root/root 1148 2011-10-19 17:41 ./usr/share/doc/vcftools/copyright -rw-r--r-- root/root 351 2011-10-19 17:45 ./usr/share/doc/vcftools/changelog.Debian.gz drwxr-xr-x root/root 0 2011-12-03 13:39 ./usr/share/doc/vcftools/examples/ -rw-r--r-- root/root 1263 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/annotate.out -rw-r--r-- root/root 2182 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/valid-4.0.vcf -rw-r--r-- root/root 1050 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/isec-n2-test.vcf.out -rw-r--r-- root/root 238 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/annotate.txt -rw-r--r-- root/root 522 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/subset.SNPs.out -rw-r--r-- root/root 1609 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/annotate-test.vcf -rw-r--r-- root/root 520 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/cmp-test-b-3.3.vcf -rw-r--r-- root/root 465 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/valid-4.0.vcf.stats.gz -rw-r--r-- root/root 957 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/merge-test-b.vcf -rw-r--r-- root/root 255 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/query-test.out -rw-r--r-- root/root 2300 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/cmp-test.out -rw-r--r-- root/root 2770 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/valid-4.1.vcf -rwxr-xr-x root/root 1439 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/perl-api-1.pl -rw-r--r-- root/root 638 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/cmp-test-a.vcf -rw-r--r-- root/root 2283 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/merge-test.vcf.out -rw-r--r-- root/root 522 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/cmp-test-a-3.3.vcf -rw-r--r-- root/root 3115 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/annotate2.out -rw-r--r-- root/root 735 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/merge-test-c.vcf -rw-r--r-- root/root 931 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/subset.indels.out -rw-r--r-- root/root 1229 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/subset.vcf -rw-r--r-- root/root 2086 2011-10-07 08:38 ./usr/share/doc/vcftools/examples/invalid-4.0.vcf -rw-r--r-- 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./usr/share/man/man1/vcf-concat.1.gz -rw-r--r-- root/root 254 2011-12-03 13:39 ./usr/share/man/man1/vcf-sort.1.gz -rw-r--r-- root/root 852 2011-12-03 13:39 ./usr/share/man/man1/vcf-compare.1.gz -rw-r--r-- root/root 307 2011-12-03 13:39 ./usr/share/man/man1/vcf-validator.1.gz -rw-r--r-- root/root 599 2011-12-03 13:39 ./usr/share/man/man1/vcf-merge.1.gz -rw-r--r-- root/root 6157 2011-12-03 13:39 ./usr/share/man/man1/vcftools.1.gz -rw-r--r-- root/root 1281 2011-12-03 13:39 ./usr/share/man/man1/vcf-annotate.1.gz -rw-r--r-- root/root 500 2011-12-03 13:39 ./usr/share/man/man1/vcf-query.1.gz -rw-r--r-- root/root 272 2011-12-03 13:39 ./usr/share/man/man1/fill-aa.1.gz -rw-r--r-- root/root 241 2011-12-03 13:39 ./usr/share/man/man1/fill-an-ac.1.gz -rw-r--r-- root/root 389 2011-12-03 13:39 ./usr/share/man/man1/vcf-convert.1.gz -rw-r--r-- root/root 956 2011-12-03 13:39 ./usr/share/man/man1/vcf-isec.1.gz -rw-r--r-- root/root 280 2011-12-03 13:39 ./usr/share/man/man1/vcf-to-tab.1.gz -rw-r--r-- root/root 685 2011-12-03 13:39 ./usr/share/man/man1/vcf-stats.1.gz -rw-r--r-- root/root 280 2011-12-03 13:39 ./usr/share/man/man1/fill-rsIDs.1.gz -rw-r--r-- root/root 558 2011-12-03 13:39 ./usr/share/man/man1/vcf-subset.1.gz vcftools_0.1.7-1_armhf.changes: Format: 1.8 Date: Wed, 19 Oct 2011 18:00:00 +0200 Source: vcftools Binary: vcftools Architecture: armhf Version: 0.1.7-1 Distribution: precise Urgency: low Maintainer: Ubuntu/armel Build Daemon Changed-By: Thorsten Alteholz Description: vcftools - designed for working with VCF files Changes: vcftools (0.1.7-1) unstable; urgency=low . * new upstream version * rearrange debian/copyright to calm lintian Checksums-Sha1: 82b46e86d42565ba0337172016de370f02255b76 296320 vcftools_0.1.7-1_armhf.deb Checksums-Sha256: 30638e90400df4cb779ec3e0a7ba9c130b832bb314ddc070d02f8f757be2e6a9 296320 vcftools_0.1.7-1_armhf.deb Files: 1b3a1583ea08c7af8c260ceb97933815 296320 science extra vcftools_0.1.7-1_armhf.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/vcftools-0.1.7 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --purge intltool-debian groff-base gettext file zlib1g-dev html2text gettext-base debhelper libunistring0 po-debconf libcroco3 libmagic1 libpipeline1 libxml2 bsdmainutils libgettextpo0 man-db (Reading database ... 12144 files and directories currently installed.) Removing zlib1g-dev ... Removing debhelper ... Removing po-debconf ... Removing man-db ... Purging configuration files for man-db ... Removing catpages as well as /var/cache/man hierarchy. Removing intltool-debian ... Removing groff-base ... Purging configuration files for groff-base ... Removing gettext ... Removing file ... Removing html2text ... Purging configuration files for html2text ... Removing gettext-base ... Removing libmagic1 ... Purging configuration files for libmagic1 ... Removing libpipeline1 ... Purging configuration files for libpipeline1 ... Removing bsdmainutils ... Purging configuration files for bsdmainutils ... Removing libgettextpo0 ... Removing libunistring0 ... Purging configuration files for libunistring0 ... Removing libcroco3 ... Purging configuration files for libcroco3 ... Removing libxml2 ... Purging configuration files for libxml2 ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20111203-1340 Build needed 00:03:25, 3476k disk space Can't open average time db /var/debbuild/avg-build-times Can't open average space db /var/debbuild/avg-build-space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '101a260143c6b8d2092cae8e6d7b3b13e1c88c93'] Scanning for processes to kill in build /home/buildd/build-101a260143c6b8d2092cae8e6d7b3b13e1c88c93/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '101a260143c6b8d2092cae8e6d7b3b13e1c88c93'] Unmounting chroot for build 101a260143c6b8d2092cae8e6d7b3b13e1c88c93... none /home/buildd/build-101a260143c6b8d2092cae8e6d7b3b13e1c88c93/chroot-autobuild/proc proc rw,relatime 0 0 none /home/buildd/build-101a260143c6b8d2092cae8e6d7b3b13e1c88c93/chroot-autobuild/dev/pts devpts rw,relatime,mode=600,ptmxmode=000 0 0 none /home/buildd/build-101a260143c6b8d2092cae8e6d7b3b13e1c88c93/chroot-autobuild/sys sysfs rw,relatime 0 0 none /home/buildd/build-101a260143c6b8d2092cae8e6d7b3b13e1c88c93/chroot-autobuild/dev/shm tmpfs rw,relatime 0 0 RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '101a260143c6b8d2092cae8e6d7b3b13e1c88c93'] Removing build 101a260143c6b8d2092cae8e6d7b3b13e1c88c93