RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '651382-1635875', '/home/buildd/filecache-default/635be72d6fb9bfb42b4c92267b98d880de50c1c5'] Synching the system clock with the buildd NTP service... 26 Jun 14:12:28 ntpdate[6692]: adjust time server 10.211.37.1 offset -0.023794 sec Unpacking chroot for build 651382-1635875 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '651382-1635875'] Mounting chroot for build 651382-1635875 RUN: /usr/share/launchpad-buildd/slavebin/apply-ogre-model ['apply-ogre-model', '651382-1635875', 'multiverse'] Attempting OGRE for multiverse in build-651382-1635875 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '651382-1635875', 'deb http://ftpmaster.internal/ubuntu intrepid main restricted universe multiverse'] Overriding sources.list in build-651382-1635875 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '651382-1635875'] Updating debian chroot for build 651382-1635875 Get:1 http://ftpmaster.internal intrepid Release.gpg [189B] Get:2 http://ftpmaster.internal intrepid Release [65.9kB] Get:3 http://ftpmaster.internal intrepid/main Packages [1236kB] Get:4 http://ftpmaster.internal intrepid/restricted Packages [7681B] Get:5 http://ftpmaster.internal intrepid/universe Packages [4551kB] Get:6 http://ftpmaster.internal intrepid/multiverse Packages [182kB] Fetched 6043kB in 7s (855kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libpcre3 The following packages will be upgraded: bash-completion belocs-locales-bin binutils bsdutils bzip2 cpp cpp-4.3 dash debianutils dmsetup dpkg dpkg-dev fakeroot g++ g++-4.3 gcc gcc-4.3 gcc-4.3-base grep initscripts libbz2-1.0 libc6 libc6-dev libdb4.6 libdevmapper1.02.1 libgcc1 libgmp3c2 libgomp1 libpam-foreground libpam-modules libpam-runtime libpam0g libstdc++6 libstdc++6-4.3-dev linux-libc-dev locales login lsb-base lzma make mount passwd perl perl-base perl-doc perl-modules python-minimal startup-tasks system-services sysv-rc sysvinit-utils sysvutils upstart upstart-compat-sysv util-linux Extracting templates from packages: 53% Extracting templates from packages: 100% Preconfiguring packages ... 55 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0B/49.2MB of archives. After this operation, 672kB of additional disk space will be used. (Reading database ... 10541 files and directories currently installed.) Preparing to replace debianutils 2.28.6 (using .../debianutils_2.28.6ubuntu3_i386.deb) ... Unpacking replacement debianutils ... Setting up debianutils (2.28.6ubuntu3) ... (Reading database ... 10543 files and directories currently installed.) Preparing to replace dash 0.5.4-8ubuntu1 (using .../dash_0.5.4-9ubuntu1_i386.deb) ... Unpacking replacement dash ... Setting up dash (0.5.4-9ubuntu1) ... (Reading database ... 10543 files and directories currently installed.) Preparing to replace dpkg 1.14.19ubuntu1 (using .../dpkg_1.14.20ubuntu1_i386.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.14.20ubuntu1) ... (Reading database ... 10545 files and directories currently installed.) Preparing to replace linux-libc-dev 2.6.24-16.30 (using .../linux-libc-dev_2.6.26-2.6_i386.deb) ... Unpacking replacement linux-libc-dev ... Preparing to replace libc6-dev 2.8~20080505-0ubuntu3 (using .../libc6-dev_2.8~20080505-0ubuntu6_i386.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libgomp1 4.3.0-5ubuntu1 (using .../libgomp1_4.3.1-1ubuntu2_i386.deb) ... Unpacking replacement libgomp1 ... Preparing to replace cpp-4.3 4.3.0-5ubuntu1 (using .../cpp-4.3_4.3.1-1ubuntu2_i386.deb) ... Unpacking replacement cpp-4.3 ... Preparing to replace gcc-4.3-base 4.3.0-5ubuntu1 (using .../gcc-4.3-base_4.3.1-1ubuntu2_i386.deb) ... Unpacking replacement gcc-4.3-base ... Setting up gcc-4.3-base (4.3.1-1ubuntu2) ... (Reading database ... 10551 files and directories currently installed.) Preparing to replace libgcc1 1:4.3.0-5ubuntu1 (using .../libgcc1_1%3a4.3.1-1ubuntu2_i386.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.3.1-1ubuntu2) ... Processing triggers for libc6 ... ldconfig deferred processing now taking place (Reading database ... 10551 files and directories currently installed.) Preparing to replace gcc-4.3 4.3.0-5ubuntu1 (using .../gcc-4.3_4.3.1-1ubuntu2_i386.deb) ... Unpacking replacement gcc-4.3 ... Preparing to replace g++-4.3 4.3.0-5ubuntu1 (using .../g++-4.3_4.3.1-1ubuntu2_i386.deb) ... Unpacking replacement g++-4.3 ... Preparing to replace libstdc++6-4.3-dev 4.3.0-5ubuntu1 (using .../libstdc++6-4.3-dev_4.3.1-1ubuntu2_i386.deb) ... Unpacking replacement libstdc++6-4.3-dev ... Preparing to replace libstdc++6 4.3.0-5ubuntu1 (using .../libstdc++6_4.3.1-1ubuntu2_i386.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.3.1-1ubuntu2) ... Processing triggers for libc6 ... ldconfig deferred processing now taking place (Reading database ... 10551 files and directories currently installed.) Preparing to replace libgmp3c2 2:4.2.2+dfsg-1ubuntu2 (using .../libgmp3c2_2%3a4.2.2+dfsg-3ubuntu1_i386.deb) ... Unpacking replacement libgmp3c2 ... Preparing to replace binutils 2.18.50.20080530-0ubuntu1 (using .../binutils_2.18.50.20080610-0ubuntu1_i386.deb) ... Unpacking replacement binutils ... Preparing to replace libc6 2.8~20080505-0ubuntu3 (using .../libc6_2.8~20080505-0ubuntu6_i386.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.8~20080505-0ubuntu6) ... Processing triggers for libc6 ... ldconfig deferred processing now taking place Selecting previously deselected package libpcre3. (Reading database ... 10550 files and directories currently installed.) Unpacking libpcre3 (from .../libpcre3_7.6-2ubuntu1_i386.deb) ... Setting up libpcre3 (7.6-2ubuntu1) ... Processing triggers for libc6 ... ldconfig deferred processing now taking place (Reading database ... 10565 files and directories currently installed.) Preparing to replace grep 2.5.3~dfsg-5 (using .../grep_2.5.3~dfsg-5ubuntu1_i386.deb) ... Unpacking replacement grep ... Setting up grep (2.5.3~dfsg-5ubuntu1) ... (Reading database ... 10565 files and directories currently installed.) Preparing to replace login 1:4.0.18.2-1ubuntu2 (using .../login_1%3a4.1.1-1ubuntu1_i386.deb) ... Unpacking replacement login ... Setting up login (1:4.1.1-1ubuntu1) ... Installing new version of config file /etc/securetty ... (Reading database ... 10566 files and directories currently installed.) Preparing to replace mount 2.14~rc3-1ubuntu1 (using .../mount_2.14-1ubuntu1_i386.deb) ... Unpacking replacement mount ... Setting up mount (2.14-1ubuntu1) ... (Reading database ... 10566 files and directories currently installed.) Preparing to replace perl-modules 5.10.0-10 (using .../perl-modules_5.10.0-11_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace libdb4.6 4.6.21-6ubuntu1 (using .../libdb4.6_4.6.21-10_i386.deb) ... Unpacking replacement libdb4.6 ... Setting up libdb4.6 (4.6.21-10) ... (Reading database ... 10566 files and directories currently installed.) Preparing to replace perl 5.10.0-10 (using .../perl_5.10.0-11_i386.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.10.0-10 (using .../perl-base_5.10.0-11_i386.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.10.0-11) ... (Reading database ... 10559 files and directories currently installed.) Preparing to replace libpam-runtime 0.99.7.1-5ubuntu7 (using .../libpam-runtime_0.99.7.1-6ubuntu2_all.deb) ... Unpacking replacement libpam-runtime ... Setting up libpam-runtime (0.99.7.1-6ubuntu2) ... (Reading database ... 10559 files and directories currently installed.) Preparing to replace libpam0g 0.99.7.1-5ubuntu7 (using .../libpam0g_0.99.7.1-6ubuntu2_i386.deb) ... Unpacking replacement libpam0g ... Setting up libpam0g (0.99.7.1-6ubuntu2) ... Processing triggers for libc6 ... ldconfig deferred processing now taking place (Reading database ... 10559 files and directories currently installed.) Preparing to replace lsb-base 3.2-4ubuntu1 (using .../lsb-base_3.2-12ubuntu1_all.deb) ... Unpacking replacement lsb-base ... Setting up lsb-base (3.2-12ubuntu1) ... (Reading database ... 10559 files and directories currently installed.) Preparing to replace util-linux 2.14~rc3-1ubuntu1 (using .../util-linux_2.14-1ubuntu1_i386.deb) ... Unpacking replacement util-linux ... Setting up util-linux (2.14-1ubuntu1) ... (Reading database ... 10559 files and directories currently installed.) Preparing to replace bsdutils 1:2.14~rc3-1ubuntu1 (using .../bsdutils_1%3a2.14-1ubuntu1_i386.deb) ... Unpacking replacement bsdutils ... Setting up bsdutils (1:2.14-1ubuntu1) ... (Reading database ... 10559 files and directories currently installed.) Preparing to replace python-minimal 2.5.2-0ubuntu1 (using .../python-minimal_2.5.2-1ubuntu1_all.deb) ... Unpacking replacement python-minimal ... Setting up python-minimal (2.5.2-1ubuntu1) ... 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Setting up lzma (4.43-14ubuntu1) ... (Reading database ... 10553 files and directories currently installed.) Preparing to replace bzip2 1.0.4-2ubuntu4 (using .../bzip2_1.0.5-0.1ubuntu1_i386.deb) ... Unpacking replacement bzip2 ... Preparing to replace libbz2-1.0 1.0.4-2ubuntu4 (using .../libbz2-1.0_1.0.5-0.1ubuntu1_i386.deb) ... Unpacking replacement libbz2-1.0 ... Preparing to replace belocs-locales-bin 2.4-2.2ubuntu7 (using .../belocs-locales-bin_2.4-2.3ubuntu1_i386.deb) ... Unpacking replacement belocs-locales-bin ... Preparing to replace locales 2.7.9-4 (using .../locales_2.7.9-5_all.deb) ... Unpacking replacement locales ... Preparing to replace startup-tasks 0.3.9-2 (using .../startup-tasks_0.3.9-6_i386.deb) ... Unpacking replacement startup-tasks ... Preparing to replace system-services 0.3.9-2 (using .../system-services_0.3.9-6_i386.deb) ... Unpacking replacement system-services ... 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Setting up initscripts (2.86.ds1-59ubuntu1) ... Installing new version of config file /etc/init.d/mountall.sh ... Installing new version of config file /etc/init.d/sendsigs ... Setting up upstart (0.3.9-6) ... Setting up upstart-compat-sysv (0.3.9-6) ... Setting up libbz2-1.0 (1.0.5-0.1ubuntu1) ... Setting up bzip2 (1.0.5-0.1ubuntu1) ... Setting up belocs-locales-bin (2.4-2.3ubuntu1) ... Setting up locales (2.7.9-5) ... Setting up startup-tasks (0.3.9-6) ... Setting up system-services (0.3.9-6) ... Setting up sysvutils (2.86.ds1-59ubuntu1) ... Setting up bash-completion (20060301-4ubuntu1) ... Installing new version of config file /etc/bash_completion ... Setting up cpp (4:4.3.1-1ubuntu2) ... Setting up dmsetup (2:1.02.25-1ubuntu2) ... Setting up make (3.81-5) ... Setting up fakeroot (1.9.5ubuntu1) ... Setting up gcc (4:4.3.1-1ubuntu2) ... Setting up libpam-foreground (0.5) ... Setting up libstdc++6-4.3-dev (4.3.1-1ubuntu2) ... Setting up g++-4.3 (4.3.1-1ubuntu2) ... Setting up perl-modules (5.10.0-11) ... Setting up g++ (4:4.3.1-1ubuntu2) ... Setting up perl (5.10.0-11) ... Setting up dpkg-dev (1.14.20ubuntu1) ... Setting up perl-doc (5.10.0-11) ... Processing triggers for libc6 ... ldconfig deferred processing now taking place RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '651382-1635875', '--nolog', '--batch', '--archive=ubuntu', '-A', '--purpose=PRIMARY', '--dist=intrepid', '--comp=multiverse', 'weka_3.5.7+tut1-1.dsc'] Initiating build Automatic build of weka_3.5.7+tut1-1 on vernadsky by sbuild/i386 1.170.5 Build started at 20080626-1413 ****************************************************************************** weka_3.5.7+tut1-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: ant, cdbs, debhelper (>= 5), ghostscript, sun-java6-jdk, texlive-latex-base Checking for already installed source dependencies... ant: missing cdbs: missing debhelper: missing ghostscript: missing sun-java6-jdk: missing texlive-latex-base: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install ant cdbs debhelper ghostscript sun-java6-jdk texlive-latex-base Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf automake1.7 autotools-dev bsdmainutils defoma ed fastjar fdupes file fontconfig fontconfig-config gcj-4.3-base gettext gettext-base gij-4.3 groff-base gsfonts html2text ifupdown intltool intltool-debian java-common java-gcj-compat java-gcj-compat-headless libasound2 libatk1.0-0 libbcel-java libcairo2 libcups2 libcupsimage2 libcupsys2 libdatrie0 libexpat1 libfontconfig1 libfreetype6 libgcj-bc libgcj-common libgcj9-0 libgcj9-0-awt libgcj9-jar libgcrypt11 libglib2.0-0 libgnutls13 libgpg-error0 libgs8 libgtk2.0-0 libgtk2.0-common libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libice6 libjaxp1.3-java libjpeg62 libkeyutils1 libkpathsea4 libkrb53 liblog4j1.2-java libltdl3 liblzo2-2 libmagic1 libmx4j-java libnewt0.52 libopencdk10 libpango1.0-0 libpango1.0-common libpaper1 libpixman-1-0 libpng12-0 libpoppler3 libpopt0 libreadline5 libregexp-java libsm6 libtasn1-3 libthai-data libthai0 libtiff4 liburi-perl libwww-perl libx11-6 libx11-data libxau6 libxaw7 libxcb-xlib0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxft2 libxi6 libxml-parser-perl libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxt6 libxtst6 m4 man-db mime-support net-tools netbase odbcinst1debian1 po-debconf readline-common sun-java6-bin sun-java6-jre tex-common texlive-base texlive-base-bin texlive-common texlive-doc-base ttf-dejavu ttf-dejavu-core ttf-dejavu-extra unixodbc whiptail x11-common Suggested packages: ant-doc autobook autoconf-archive autoconf-doc autoconf2.13 gnu-standards libtool vacation wamerican wordlist whois devscripts doc-base dh-make defoma-doc dfontmgr psfontmgr x-ttcidfont-conf cvs gettext-doc ghostscript-x hpijs gcj-4.3 groff iproute dhcp3-client dhcp-client ppp equivs libgcj9-dbg libgcj9-src libasound2-plugins libbcel-java-doc cups-common libfreetype6-dev rng-tools gnutls-bin librsvg2-common krb5-doc krb5-user libgnumail-java jython libservlet2.4-java ttf-kochi-gothic ttf-kochi-mincho ttf-thryomanes ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp libio-socket-ssl-perl libxerces2-java-doc less www-browser binfmt-support sun-java6-demo sun-java6-doc sun-java6-source sun-java6-fonts sun-java6-plugin ia32-sun-java6-plugin ttf-wqy-zenhei xpdf-reader pdf-viewer gv postscript-viewer libct1 libmyodbc odbc-postgresql Recommended packages: ant-gcj ant-optional automake automaken libft-perl curl wget lynx libatk1.0-data libglib2.0-data hicolor-icon-theme libgtk2.0-bin libjaxp1.3-java-gcj liblog4j1.2-java-gcj libfribidi0 libpaper-utils libcompress-zlib-perl libhtml-format-perl libmailtools-perl libxerces2-java-gcj xml-core libmail-sendmail-perl libmail-box-perl libnss-mdns libxp6 gsfonts-x11 dvipdfmx lmodern perl-tk texlive-base-bin-doc texlive-latex-base-doc The following NEW packages will be installed: ant autoconf automake1.7 autotools-dev bsdmainutils cdbs debhelper defoma ed fastjar fdupes file fontconfig fontconfig-config gcj-4.3-base gettext gettext-base ghostscript gij-4.3 groff-base gsfonts html2text ifupdown intltool intltool-debian java-common java-gcj-compat java-gcj-compat-headless libasound2 libatk1.0-0 libbcel-java libcairo2 libcups2 libcupsimage2 libcupsys2 libdatrie0 libexpat1 libfontconfig1 libfreetype6 libgcj-bc libgcj-common libgcj9-0 libgcj9-0-awt libgcj9-jar libgcrypt11 libglib2.0-0 libgnutls13 libgpg-error0 libgs8 libgtk2.0-0 libgtk2.0-common libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libice6 libjaxp1.3-java libjpeg62 libkeyutils1 libkpathsea4 libkrb53 liblog4j1.2-java libltdl3 liblzo2-2 libmagic1 libmx4j-java libnewt0.52 libopencdk10 libpango1.0-0 libpango1.0-common libpaper1 libpixman-1-0 libpng12-0 libpoppler3 libpopt0 libreadline5 libregexp-java libsm6 libtasn1-3 libthai-data libthai0 libtiff4 liburi-perl libwww-perl libx11-6 libx11-data libxau6 libxaw7 libxcb-xlib0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxft2 libxi6 libxml-parser-perl libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxt6 libxtst6 m4 man-db mime-support net-tools netbase odbcinst1debian1 po-debconf readline-common sun-java6-bin sun-java6-jdk sun-java6-jre tex-common texlive-base texlive-base-bin texlive-common texlive-doc-base texlive-latex-base ttf-dejavu ttf-dejavu-core ttf-dejavu-extra unixodbc whiptail x11-common 0 upgraded, 129 newly installed, 0 to remove and 0 not upgraded. Need to get 43.2MB/111MB of archives. After this operation, 325MB of additional disk space will be used. Get:1 http://ftpmaster.internal intrepid/multiverse sun-java6-jre 6-06-0ubuntu1 [6334kB] Get:2 http://ftpmaster.internal intrepid/multiverse sun-java6-bin 6-06-0ubuntu1 [27.3MB] Get:3 http://ftpmaster.internal intrepid/multiverse sun-java6-jdk 6-06-0ubuntu1 [9625kB] debconf: unable to initialize frontend: Readline debconf: (This frontend requires a controlling tty.) debconf: falling back to frontend: Teletype dpkg-preconfigure: unable to re-open stdin: Fetched 43.2MB in 2s (14.5MB/s) Selecting previously deselected package x11-common. (Reading database ... 10557 files and directories currently installed.) Unpacking x11-common (from .../x11-common_1%3a7.3+12ubuntu2_all.deb) ... Selecting previously deselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.3-3_i386.deb) ... Selecting previously deselected package libxdmcp6. 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Setting up liblzo2-2 (2.03-1) ... Setting up libopencdk10 (0.6.6-1ubuntu1) ... Setting up libtasn1-3 (1.4-1) ... Setting up libgnutls13 (2.0.4-1ubuntu2) ... Setting up libkeyutils1 (1.2-7) ... Setting up libkrb53 (1.6.dfsg.4~beta1-3) ... Setting up libnewt0.52 (0.52.2-11.2ubuntu1) ... Setting up libpopt0 (1.14-4) ... Setting up mime-support (3.44-1) ... Setting up whiptail (0.52.2-11.2ubuntu1) ... Setting up bsdmainutils (6.1.10ubuntu2) ... Setting up ed (0.7-1ubuntu1) ... Setting up libmagic1 (4.24-2ubuntu1) ... Setting up file (4.24-2ubuntu1) ... Setting up groff-base (1.18.1.1-20) ... Setting up libexpat1 (2.0.1-4) ... Setting up libhtml-tagset-perl (3.20-2) ... Setting up liburi-perl (1.35.dfsg.1-1) ... Setting up libhtml-parser-perl (3.56-1ubuntu2) ... Setting up libhtml-tree-perl (3.23-1) ... Setting up man-db (2.5.2-1) ... Building database of manual pages ... Setting up fastjar (2:0.95-1) ... Setting up gcj-4.3-base (4.3.1-1ubuntu2) ... Setting up libgcj-common (1:4.3.1-1ubuntu2) ... Setting up libasound2 (1.0.16-2ubuntu1) ... Setting up libgcj9-0 (4.3.1-1ubuntu2) ... Setting up gij-4.3 (4.3.1-1ubuntu2) ... Setting up libgcj-bc (4.3.1-1ubuntu2) ... Setting up libgcj9-jar (4.3.1-1ubuntu2) ... Setting up libglib2.0-0 (2.17.2-1) ... Setting up libatk1.0-0 (1.22.0-1ubuntu1) ... Setting up libfreetype6 (2.3.6-1ubuntu1) ... Setting up defoma (0.11.10-0.2) ... Setting up ttf-dejavu-core (2.25-1) ... Setting up ttf-dejavu-extra (2.25-1) ... Setting up ttf-dejavu (2.25-1) ... Setting up fontconfig-config (2.6.0-1ubuntu1) ... Setting up libfontconfig1 (2.6.0-1ubuntu1) ... Setting up libpixman-1-0 (0.10.0-2) ... Setting up libpng12-0 (1.2.27-1) ... Setting up libxrender1 (1:0.9.4-2) ... Setting up libcairo2 (1.6.4-1ubuntu1) ... Setting up libgtk2.0-common (2.13.3-0ubuntu2) ... Setting up libcups2 (1.3.7-8~svn472) ... Setting up libjpeg62 (6b-14) ... Setting up fontconfig (2.6.0-1ubuntu1) ... Updating font configuration of fontconfig... Cleaning up category cid.. Cleaning up category truetype.. Cleaning up category type1.. Updating category type1.. Updating category truetype.. Updating category cid.. Updating fontconfig cache for /usr/share/fonts/truetype/ttf-dejavu Cleaning up old fontconfig caches... done. Regenerating fonts cache... done. Setting up libpango1.0-common (1.21.3-0ubuntu1) ... I: Purging /etc/pango/pango.modules Cleaning up font configuration of pango... Updating font configuration of pango... Cleaning up category xfont.. Updating category xfont.. *** You don't have any defomized font packages. *** So we are trying to force to generate pangox.aliases... Setting up libdatrie0 (0.1.3-2) ... Setting up libthai-data (0.1.9-4) ... Setting up libthai0 (0.1.9-4) ... Setting up libxft2 (2.1.12-3ubuntu1) ... Setting up libpango1.0-0 (1.21.3-0ubuntu1) ... Setting up libtiff4 (3.8.2-10) ... Setting up libxext6 (2:1.0.4-1) ... Setting up libxcomposite1 (1:0.4.0-3) ... 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Setting up gsfonts (1:8.11+urwcyr1.0.7~pre43-2) ... (Re-)registering PostScript fonts... Updating fontconfig cache for /usr/share/fonts/type1/gsfonts done. Setting up ghostscript (8.62.dfsg.1-2.1ubuntu1) ... Updating font configuration of gs... Cleaning up category psprint.. Cleaning up category cmap.. Cleaning up category cid.. Cleaning up category truetype.. Cleaning up category gsfontderivative.. Cleaning up category type3.. Cleaning up category type1.. Updating category type1.. Updating category type3.. Updating category gsfontderivative.. Updating category truetype.. Updating category cid.. Updating category cmap.. Updating category psprint.. Setting up libkpathsea4 (2007.dfsg.2-1) ... Setting up libxml2 (2.6.32.dfsg-2ubuntu1) ... Setting up libpoppler3 (0.8.3-1) ... Setting up libxmu6 (2:1.0.4-1) ... Setting up libxpm4 (1:3.5.7-1) ... Setting up libxaw7 (2:1.0.4-2) ... Setting up tex-common (1.11) ... Creating config file /etc/texmf/texmf.d/05TeXMF.cnf with new version Creating config file /etc/texmf/texmf.d/15Plain.cnf with new version Creating config file /etc/texmf/texmf.d/45TeXinputs.cnf with new version Creating config file /etc/texmf/texmf.d/55Fonts.cnf with new version Creating config file /etc/texmf/texmf.d/65BibTeX.cnf with new version Creating config file /etc/texmf/texmf.d/75DviPS.cnf with new version Creating config file /etc/texmf/texmf.d/85Misc.cnf with new version Creating config file /etc/texmf/texmf.d/90TeXDoc.cnf with new version Creating config file /etc/texmf/texmf.d/95NonPath.cnf with new version Creating config file /etc/texmf/updmap.d/00updmap.cfg with new version Creating config file /etc/texmf/texmf.cnf with new version Setting up texlive-common (2007.dfsg.1-1) ... Setting up texlive-doc-base (2007-4) ... Running mktexlsr. This may take some time... done. Setting up texlive-base-bin (2007.dfsg.2-1) ... Running mktexlsr. This may take some time... done. Building format(s) --all. This may take some time... done. Setting up texlive-base (2007.dfsg.1-1) ... Running mktexlsr. This may take some time... done. Building format(s) --all. This may take some time... done. Running updmap-sys. This may take some time... done. Setting up texlive-latex-base (2007.dfsg.1-1) ... Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf. This may take some time... done. Setting up java-gcj-compat (1.0.78-1) ... Setting up libregexp-java (1.4-4) ... Setting up libjaxp1.3-java (1.3.04-3) ... Setting up libxerces2-java (2.9.1-2) ... Setting up ant (1.7.0-6) ... Setting up sun-java6-jre (6-06-0ubuntu1) ... Setting up netbase (4.32ubuntu1) ... Setting up libwww-perl (5.812-1) ... Setting up libxml-parser-perl (2.36-1.1build2) ... Setting up libbcel-java (5.2-3ubuntu1) ... Setting up liblog4j1.2-java (1.2.15-3) ... Setting up libmx4j-java (3.0.2-3) ... Setting up java-gcj-compat-headless (1.0.78-1) ... Setting up intltool (0.40.0-1) ... Setting up cdbs (0.4.52ubuntu1) ... Setting up sun-java6-bin (6-06-0ubuntu1) ... Setting up sun-java6-jdk (6-06-0ubuntu1) ... Setting up ifupdown (0.6.8ubuntu9) ... ifupdown.postinst: Warning: No 'iface lo' definition found in /etc/network/interfaces ifupdown.postinst: Warning: No 'auto lo' statement found in /etc/network/interfaces Processing triggers for libc6 ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.8~20080505-0ubuntu6 make_3.81-5 dpkg-dev_1.14.20ubuntu1 gcc-4.3_4.3.1-1ubuntu2 g++-4.3_4.3.1-1ubuntu2 binutils_2.18.50.20080610-0ubuntu1 libstdc++6_4.3.1-1ubuntu2 libstdc++6-4.3-dev_4.3.1-1ubuntu2 ------------------------------------------------------------------------------ sh: gcc: not found dpkg-source: warning: Couldn't determine gcc system type, falling back to default (native compilation) gpg: Signature made Mon Feb 25 11:07:03 2008 GMT using DSA key ID C4CF8EC3 gpg: Can't check signature: public key not found dpkg-source: extracting weka in weka-3.5.7+tut1 dpkg-source: unpacking weka_3.5.7+tut1.orig.tar.gz dpkg-source: applying /home/buildd/build-651382-1635875/weka_3.5.7+tut1-1.diff.gz dpkg-buildpackage: set CFLAGS to default value: -g -O2 dpkg-buildpackage: set CPPFLAGS to default value: dpkg-buildpackage: set LDFLAGS to default value: -Wl,-Bsymbolic-functions dpkg-buildpackage: set FFLAGS to default value: -g -O2 dpkg-buildpackage: set CXXFLAGS to default value: -g -O2 dpkg-buildpackage: source package weka dpkg-buildpackage: source version 3.5.7+tut1-1 dpkg-buildpackage: host architecture i386 /usr/bin/fakeroot debian/rules clean test -x debian/rules dh_testroot dh_clean cd . && /usr/lib/jvm/java-6-sun/bin/java -classpath /usr/share/ant/lib/ant.jar:/usr/share/ant/lib/ant-launcher.jar:/usr/lib/jvm/java-6-sun/lib/tools.jar -Dant.home=/usr/share/ant org.apache.tools.ant.Main -Dcompile.debug=true -Dcompile.optimize=true -buildfile weka/build.xml clean Buildfile: weka/build.xml init_all: [available] DEPRECATED - used to override an existing property. [available] Build file should not reuse the same property name for different values. clean: BUILD SUCCESSFUL Total time: 0 seconds rm -f debian/stamp-ant-build debian/rules build test -x debian/rules mkdir -p "." cd . && /usr/lib/jvm/java-6-sun/bin/java -classpath /usr/share/ant/lib/ant.jar:/usr/share/ant/lib/ant-launcher.jar:/usr/lib/jvm/java-6-sun/lib/tools.jar -Dant.home=/usr/share/ant org.apache.tools.ant.Main -Dcompile.debug=true -Dcompile.optimize=true -buildfile weka/build.xml docs exejar Buildfile: weka/build.xml init_all: [available] DEPRECATED - used to override an existing property. [available] Build file should not reuse the same property name for different values. docs: [javadoc] Generating Javadoc [javadoc] Javadoc execution [javadoc] Loading source files for package weka.associations... [javadoc] Loading source files for package weka.associations.gsp... [javadoc] Loading source files for package weka.associations.tertius... [javadoc] Loading source files for package weka.attributeSelection... [javadoc] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/LFSMethods.java:19: warning: unmappable character for encoding ASCII [javadoc] * Copyright (C) 2007 Martin G??tlein [javadoc] ^ [javadoc] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/LFSMethods.java:19: warning: unmappable character for encoding ASCII [javadoc] * Copyright (C) 2007 Martin G??tlein [javadoc] ^ [javadoc] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/LinearForwardSelection.java:19: warning: unmappable character for encoding ASCII [javadoc] * Copyright (C) 2007 Martin G??tlein [javadoc] ^ [javadoc] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/LinearForwardSelection.java:19: warning: unmappable character for encoding ASCII [javadoc] * Copyright (C) 2007 Martin G??tlein [javadoc] ^ [javadoc] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/SubsetSizeForwardSelection.java:19: warning: unmappable character for encoding ASCII [javadoc] * Copyright (C) 2007 Martin G??tlein [javadoc] ^ [javadoc] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/SubsetSizeForwardSelection.java:19: warning: unmappable character for encoding ASCII [javadoc] * Copyright (C) 2007 Martin G??tlein [javadoc] ^ [javadoc] Loading source files for package weka.classifiers... [javadoc] Loading source files for package weka.classifiers.bayes... [javadoc] Loading source files for package weka.classifiers.bayes.net... [javadoc] Loading source files for package weka.classifiers.bayes.net.estimate... [javadoc] Loading source files for package weka.classifiers.bayes.net.search... [javadoc] Loading source files for package weka.classifiers.bayes.net.search.ci... [javadoc] Loading source files for package weka.classifiers.bayes.net.search.fixed... [javadoc] Loading source files for package weka.classifiers.bayes.net.search.global... [javadoc] Loading source files for package weka.classifiers.bayes.net.search.local... [javadoc] Loading source files for package weka.classifiers.evaluation... [javadoc] Loading source files for package weka.classifiers.functions... [javadoc] Loading source files for package weka.classifiers.functions.neural... [javadoc] Loading source files for package weka.classifiers.functions.pace... 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[javadoc] Loading source files for package weka.classifiers.trees.adtree... [javadoc] Loading source files for package weka.classifiers.trees.j48... [javadoc] Loading source files for package weka.classifiers.trees.lmt... [javadoc] Loading source files for package weka.classifiers.trees.m5... [javadoc] Loading source files for package weka.classifiers.xml... [javadoc] Loading source files for package weka.clusterers... [javadoc] Loading source files for package weka.clusterers.forOPTICSAndDBScan.DataObjects... [javadoc] Loading source files for package weka.clusterers.forOPTICSAndDBScan.Databases... [javadoc] Loading source files for package weka.clusterers.forOPTICSAndDBScan.OPTICS_GUI... [javadoc] Loading source files for package weka.clusterers.forOPTICSAndDBScan.Utils... [javadoc] Loading source files for package weka.core... [javadoc] Loading source files for package weka.core.converters... [javadoc] Loading source files for package weka.core.matrix... [javadoc] Loading source files for package weka.core.neighboursearch... [javadoc] Loading source files for package weka.core.neighboursearch.balltrees... [javadoc] Loading source files for package weka.core.neighboursearch.covertrees... [javadoc] Loading source files for package weka.core.neighboursearch.kdtrees... [javadoc] Loading source files for package weka.core.stemmers... [javadoc] Loading source files for package weka.core.tokenizers... [javadoc] Loading source files for package weka.core.xml... [javadoc] Loading source files for package weka.datagenerators... [javadoc] Loading source files for package weka.datagenerators.classifiers.classification... [javadoc] Loading source files for package weka.datagenerators.classifiers.regression... [javadoc] Loading source files for package weka.datagenerators.clusterers... [javadoc] Loading source files for package weka.estimators... [javadoc] Loading source files for package weka.experiment... [javadoc] Loading source files for package weka.experiment.xml... [javadoc] Loading source files for package weka.filters... [javadoc] Loading source files for package weka.filters.supervised.attribute... [javadoc] Loading source files for package weka.filters.supervised.instance... [javadoc] Loading source files for package weka.filters.unsupervised.attribute... [javadoc] Loading source files for package weka.filters.unsupervised.instance... [javadoc] Loading source files for package weka.gui... [javadoc] Loading source files for package weka.gui.arffviewer... [javadoc] Loading source files for package weka.gui.beans... [javadoc] Loading source files for package weka.gui.beans.xml... [javadoc] Loading source files for package weka.gui.boundaryvisualizer... [javadoc] Loading source files for package weka.gui.ensembleLibraryEditor... [javadoc] Loading source files for package weka.gui.ensembleLibraryEditor.tree... [javadoc] Loading source files for package weka.gui.experiment... [javadoc] Loading source files for package weka.gui.explorer... [javadoc] Loading source files for package weka.gui.graphvisualizer... [javadoc] Loading source files for package weka.gui.sql... [javadoc] Loading source files for package weka.gui.sql.event... [javadoc] Loading source files for package weka.gui.streams... [javadoc] Loading source files for package weka.gui.treevisualizer... [javadoc] Loading source files for package weka.gui.visualize... [javadoc] Loading source files for package weka.gui.visualize.plugins... [javadoc] Constructing Javadoc information... [javadoc] /build/buildd/weka-3.5.7+tut1/weka/gui/boundaryvisualizer/BoundaryPanel.java:54: warning: com.sun.image.codec.jpeg.JPEGCodec is Sun proprietary API and may be removed in a future release [javadoc] import com.sun.image.codec.jpeg.JPEGCodec; [javadoc] ^ [javadoc] /build/buildd/weka-3.5.7+tut1/weka/gui/boundaryvisualizer/BoundaryPanel.java:55: warning: com.sun.image.codec.jpeg.JPEGEncodeParam is Sun proprietary API and may be removed in a future release [javadoc] import com.sun.image.codec.jpeg.JPEGEncodeParam; [javadoc] ^ [javadoc] /build/buildd/weka-3.5.7+tut1/weka/gui/boundaryvisualizer/BoundaryPanel.java:56: warning: com.sun.image.codec.jpeg.JPEGImageEncoder is Sun proprietary API and may be removed in a future release [javadoc] import com.sun.image.codec.jpeg.JPEGImageEncoder; [javadoc] ^ [javadoc] /build/buildd/weka-3.5.7+tut1/weka/gui/visualize/JPEGWriter.java:35: warning: com.sun.image.codec.jpeg.JPEGCodec is Sun proprietary API and may be removed in a future release [javadoc] import com.sun.image.codec.jpeg.JPEGCodec; [javadoc] ^ [javadoc] /build/buildd/weka-3.5.7+tut1/weka/gui/visualize/JPEGWriter.java:36: warning: com.sun.image.codec.jpeg.JPEGEncodeParam is Sun proprietary API and may be removed in a future release [javadoc] import com.sun.image.codec.jpeg.JPEGEncodeParam; [javadoc] ^ [javadoc] /build/buildd/weka-3.5.7+tut1/weka/gui/visualize/JPEGWriter.java:37: warning: com.sun.image.codec.jpeg.JPEGImageEncoder is Sun proprietary API and may be removed in a future release [javadoc] import com.sun.image.codec.jpeg.JPEGImageEncoder; [javadoc] ^ [javadoc] Standard Doclet version 1.6.0_06 [javadoc] Building tree for all the packages and classes... [javadoc] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/LFSMethods.java:642: warning - @param argument "gr" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/LinearForwardSelection.java:579: warning - @param argument "d" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/LinearForwardSelection.java:727: warning - @param argument "ASEvaluator" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/SubsetSizeForwardSelection.java:573: warning - @param argument "d" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/SubsetSizeForwardSelection.java:681: warning - @param argument "ASEvaluator" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/bayes/net/EditableBayesNet.java:1142: warning - @param argument "iNode" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/bayes/net/EditableBayesNet.java:1443: warning - @param argument "iNode" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/bayes/net/MarginCalculator.java:41: warning - @return tag cannot be used in method with void return type. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/bayes/net/MarginCalculator.java:755: warning - @param argument "bayesNet:" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/bayes/net/MarginCalculator.java:795: warning - @param argument "order:" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/bayes/net/MarginCalculator.java:795: warning - @param argument "bAdjacencyMatrix:" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/bayes/net/MarginCalculator.java:239: warning - @param argument "node:" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/bayes/net/search/global/GlobalScoreSearchAlgorithm.java:377: warning - @return tag has no arguments. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/bayes/net/search/SearchAlgorithm.java:365: warning - @return tag has no arguments. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/bayes/net/search/local/LocalScoreSearchAlgorithm.java:559: warning - @return tag has no arguments. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/functions/supportVector/RegOptimizer.java:432: warning - @return tag has no arguments. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/trees/j48/C45PruneableClassifierTreeG.java:161: warning - @param argument "datathe" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/classifiers/trees/j48/C45PruneableClassifierTreeG.java:1161: warning - @param argument "double" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/clusterers/forOPTICSAndDBScan/Utils/PriorityQueueElement.java:76: warning - @return tag has no arguments. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/clusterers/forOPTICSAndDBScan/Utils/UpdateQueueElement.java:82: warning - @return tag has no arguments. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/core/Jython.java:91: warning - @param argument "o" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/core/Jython.java:142: warning - @param argument "filename" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/core/Jython.java:156: warning - @param argument "filename" is not a parameter name. [javadoc] /build/buildd/weka-3.5.7+tut1/weka/core/converters/ConverterUtils.java:452: warning - Tag @see: can't find DataSource(InputStream) in weka.core.converters.ConverterUtils.DataSource [javadoc] /build/buildd/weka-3.5.7+tut1/weka/core/converters/ConverterUtils.java:470: warning - Tag @see: can't find DataSource(Loader) in weka.core.converters.ConverterUtils.DataSource [javadoc] /build/buildd/weka-3.5.7+tut1/weka/core/converters/ConverterUtils.java:434: warning - Tag @see: can't find DataSource(String) in weka.core.converters.ConverterUtils.DataSource [javadoc] Building index for all the packages and classes... [javadoc] Building index for all classes... [javadoc] Generating /build/buildd/weka-3.5.7+tut1/doc/stylesheet.css... [javadoc] 38 warnings init_all: init_compile: [mkdir] Created dir: /build/buildd/weka-3.5.7+tut1/build/classes compile: [javac] Compiling 994 source files to /build/buildd/weka-3.5.7+tut1/build/classes [javac] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/LFSMethods.java:19: warning: unmappable character for encoding ASCII [javac] * Copyright (C) 2007 Martin G??tlein [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/LFSMethods.java:19: warning: unmappable character for encoding ASCII [javac] * Copyright (C) 2007 Martin G??tlein [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/LinearForwardSelection.java:19: warning: unmappable character for encoding ASCII [javac] * Copyright (C) 2007 Martin G??tlein [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/LinearForwardSelection.java:19: warning: unmappable character for encoding ASCII [javac] * Copyright (C) 2007 Martin G??tlein [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/SubsetSizeForwardSelection.java:19: warning: unmappable character for encoding ASCII [javac] * Copyright (C) 2007 Martin G??tlein [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/attributeSelection/SubsetSizeForwardSelection.java:19: warning: unmappable character for encoding ASCII [javac] * Copyright (C) 2007 Martin G??tlein [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/boundaryvisualizer/BoundaryPanel.java:54: warning: com.sun.image.codec.jpeg.JPEGCodec is Sun proprietary API and may be removed in a future release [javac] import com.sun.image.codec.jpeg.JPEGCodec; [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/boundaryvisualizer/BoundaryPanel.java:55: warning: com.sun.image.codec.jpeg.JPEGEncodeParam is Sun proprietary API and may be removed in a future release [javac] import com.sun.image.codec.jpeg.JPEGEncodeParam; [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/boundaryvisualizer/BoundaryPanel.java:56: warning: com.sun.image.codec.jpeg.JPEGImageEncoder is Sun proprietary API and may be removed in a future release [javac] import com.sun.image.codec.jpeg.JPEGImageEncoder; [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/visualize/JPEGWriter.java:35: warning: com.sun.image.codec.jpeg.JPEGCodec is Sun proprietary API and may be removed in a future release [javac] import com.sun.image.codec.jpeg.JPEGCodec; [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/visualize/JPEGWriter.java:36: warning: com.sun.image.codec.jpeg.JPEGEncodeParam is Sun proprietary API and may be removed in a future release [javac] import com.sun.image.codec.jpeg.JPEGEncodeParam; [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/visualize/JPEGWriter.java:37: warning: com.sun.image.codec.jpeg.JPEGImageEncoder is Sun proprietary API and may be removed in a future release [javac] import com.sun.image.codec.jpeg.JPEGImageEncoder; [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/boundaryvisualizer/BoundaryPanel.java:994: warning: com.sun.image.codec.jpeg.JPEGImageEncoder is Sun proprietary API and may be removed in a future release [javac] JPEGImageEncoder encoder = JPEGCodec.createJPEGEncoder(out); [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/boundaryvisualizer/BoundaryPanel.java:994: warning: com.sun.image.codec.jpeg.JPEGCodec is Sun proprietary API and may be removed in a future release [javac] JPEGImageEncoder encoder = JPEGCodec.createJPEGEncoder(out); [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/boundaryvisualizer/BoundaryPanel.java:1001: warning: com.sun.image.codec.jpeg.JPEGEncodeParam is Sun proprietary API and may be removed in a future release [javac] JPEGEncodeParam param = encoder.getDefaultJPEGEncodeParam(bi); [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/visualize/JPEGWriter.java:159: warning: com.sun.image.codec.jpeg.JPEGImageEncoder is Sun proprietary API and may be removed in a future release [javac] JPEGImageEncoder encoder; [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/visualize/JPEGWriter.java:160: warning: com.sun.image.codec.jpeg.JPEGEncodeParam is Sun proprietary API and may be removed in a future release [javac] JPEGEncodeParam param; [javac] ^ [javac] /build/buildd/weka-3.5.7+tut1/weka/gui/visualize/JPEGWriter.java:173: warning: com.sun.image.codec.jpeg.JPEGCodec is Sun proprietary API and may be removed in a future release [javac] encoder = JPEGCodec.createJPEGEncoder(ostream); [javac] ^ [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 18 warnings [copy] Copying 412 files to /build/buildd/weka-3.5.7+tut1/build/classes [rmic] RMI Compiling 1 class to /build/buildd/weka-3.5.7+tut1/build/classes init_dist: [mkdir] Created dir: /build/buildd/weka-3.5.7+tut1/dist exejar: [jar] Building jar: /build/buildd/weka-3.5.7+tut1/dist/weka.jar BUILD SUCCESSFUL Total time: 2 minutes 35 seconds touch debian/stamp-ant-build DEB_ANT_CHECK_TARGET unset, not running checks # bayes ( cd wekadocs/bayesnet && \ latex bayesnet.tex ; latex bayesnet.tex ;\ dvipdf bayesnet.dvi ) This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./bayesnet.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/graphics/epsfig.sty (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty) (/etc/texmf/tex/latex/config/graphics.cfg) (/usr/share/texmf-texlive/tex/latex/graphics/dvips.def)))) No file bayesnet.aux. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1] LaTeX Warning: Citation `weka' on page 1 undefined on input line 28. Overfull \hbox (4.61742pt too wide) in paragraph at lines 28--30 []\OT1/cmr/m/n/9 Various Bayesian net-work clas-si-fier learn-ing al-go-rithms are im-ple-mented [1] No file bayesnet.toc. [2] [3] LaTeX Warning: Reference `eq.infer' on page 4 undefined on input line 124. [4] [5] LaTeX Warning: Reference `sec.estimate' on page 6 undefined on input line 208. LaTeX Warning: Citation `Moore' on page 6 undefined on input line 211. Overfull \hbox (1.83237pt too wide) in paragraph at lines 210--215 \OT1/cmr/m/n/10 ent from the ADTree clas-si-fier al-go-rithm from \OT1/cmtt/m/n /10 weka.classifiers.tree.ADTree\OT1/cmr/m/n/10 . [6] [7] LaTeX Warning: Citation `bouck1995' on page 8 undefined on input line 282. LaTeX Warning: Citation `CooperHerskovits1992' on page 8 undefined on input lin e 311. LaTeX Warning: Citation `heckerman95' on page 8 undefined on input line 317. LaTeX Warning: Citation `CooperHerskovits1992' on page 8 undefined on input lin e 324. LaTeX Warning: Citation `Buntine1996' on page 8 undefined on input line 332. [8] LaTeX Warning: Citation `ChengGreiner1999' on page 9 undefined on input line 34 3. LaTeX Warning: Citation `friedman97' on page 9 undefined on input line 343. LaTeX Warning: Citation `chow1968' on page 9 undefined on input line 345. LaTeX Warning: Citation `bouck1995' on page 9 undefined on input line 347. Underfull \hbox (badness 10000) in paragraph at lines 361--366 LaTeX Warning: Citation `bouck1995' on page 9 undefined on input line 367. [9] Underfull \hbox (badness 10000) in paragraph at lines 382--386 Underfull \hbox (badness 10000) in paragraph at lines 391--406 [10] Overfull \hbox (2.84462pt too wide) in paragraph at lines 408--408 []\OT1/cmr/bx/n/14.4 Conditional in-de-pen-dence test based struc-ture LaTeX Warning: Citation `verma' on page 11 undefined on input line 422. [11] LaTeX Warning: Citation `verma' on page 12 undefined on input line 439. Overfull \hbox (106.49606pt too wide) in paragraph at lines 456--456 [] \OT1/cmtt/m/n/10 Rule 5: if no edges are directed then take a rand om one (first we can find)[] Underfull \hbox (badness 10000) in paragraph at lines 464--472 [12] LaTeX Warning: Reference `sec.score' on page 13 undefined on input line 481. [13] LaTeX Warning: Reference `sec.score' on page 14 undefined on input line 511. [14] LaTeX Warning: Citation `bouck1995' on page 15 undefined on input line 546. [15] Overfull \hbox (28.27066pt too wide) in paragraph at lines 627--627 [] \OT1/cmtt/m/n/9 Sets test file. If missing, a cross-validation will b e performed on the[] [16] Overfull \hbox (14.09583pt too wide) in paragraph at lines 627--627 [] \OT1/cmtt/m/n/9 Retrieves the options from the XML-data instead of th e command line.[] [17] Overfull \hbox (57.99673pt too wide) in paragraph at lines 674--674 [] \OT1/cmtt/m/n/10 Use tournament selection (true) or maximum subpopul atin (false).[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 674--674 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 674--674 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 674--674 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 691--691 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 691--691 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 691--691 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 708--708 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 708--708 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 708--708 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [18] Overfull \hbox (42.24687pt too wide) in paragraph at lines 729--729 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 729--729 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 729--729 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 750--750 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 750--750 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 750--750 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [19] Overfull \hbox (42.24687pt too wide) in paragraph at lines 768--768 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 768--768 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 768--768 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 794--794 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 794--794 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 794--794 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 804--804 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 804--804 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 804--804 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [20] Overfull \hbox (42.24687pt too wide) in paragraph at lines 814--814 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 814--814 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 814--814 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 When determining whether an edge exists a search is performed[] Overfull \hbox (52.74678pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 for a set Z that separates the nodes. MaxCardinalit y determines[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 the maximum size of the set Z. This greatly influen ces the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (57.99673pt too wide) in paragraph at lines 859--859 [] \OT1/cmtt/m/n/10 Use tournament selection (true) or maximum subpopul atin (false).[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 859--859 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] [21] Overfull \hbox (31.74696pt too wide) in paragraph at lines 859--859 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 859--859 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 879--879 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 879--879 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 879--879 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 899--899 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 899--899 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 899--899 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [22] Overfull \hbox (42.24687pt too wide) in paragraph at lines 923--923 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 923--923 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 923--923 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 944--944 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 944--944 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 944--944 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [23] Overfull \hbox (42.24687pt too wide) in paragraph at lines 973--973 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 973--973 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 973--973 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 986--986 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 986--986 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 986--986 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (10.74715pt too wide) in paragraph at lines 991--991 [] \OT1/cmtt/m/n/10 Name of file containing network structure in BIF fo rmat[] [24] [25] Overfull \hbox (641.9914pt too wide) in paragraph at lines 1073--1073 []\OT1/cmtt/m/n/10 Scheme: weka.classifiers.bayes.BayesNet -D -B iris.xml -Q weka.classifiers.bayes.net.search.local.K2 -- -P 2 -S BAYES -E weka.classif iers.bayes.net.estimate.SimpleEstimator -- -A 0.5[] Overfull \hbox (106.49606pt too wide) in paragraph at lines 1091--1091 []\OT1/cmtt/m/n/10 Relation: iris-weka.filters.unsupervised.attribute.Discr etize-B2-M-1.0-Rfirst-last[] LaTeX Warning: Citation `Moore' on page 26 undefined on input line 1092. [26] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1153--1153 []\OT1/cmtt/m/n/10 Correctly Classified Instances 116 77. 3333 %[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1153--1153 []\OT1/cmtt/m/n/10 Incorrectly Classified Instances 34 22. 6667 %[] [27] [28] [29] Overfull \hbox (76.10909pt too wide) in paragraph at lines 1238--1244 []\OT1/cmr/m/n/10 Create a class that de-rives from \OT1/cmtt/m/n/10 weka.class ifiers.bayes.net.search.SearchAlgorithm\OT1/cmr/m/n/10 . Overfull \hbox (6.74959pt too wide) in paragraph at lines 1238--1244 \OT1/cmr/m/n/10 validation based, you prob-a-bly want to de-rive from \OT1/cmtt /m/n/10 ScoreSearchAlgorithm\OT1/cmr/m/n/10 , Overfull \hbox (56.55356pt too wide) in paragraph at lines 1238--1244 \OT1/cmtt/m/n/10 CISearchAlgorithm \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 CVSearch Algorithm \OT1/cmr/m/n/10 in-stead of de-riv-ing from \OT1/cmtt/m/n/10 SearchAl gorithm Overfull \hbox (29.2748pt too wide) in paragraph at lines 1245--1250 \OT1/cmtt/m/n/10 public void buildStructure(BayesNet bayesNet, Instances instan ces)\OT1/cmr/m/n/10 . Overfull \hbox (6.05424pt too wide) in paragraph at lines 1245--1250 \OT1/cmr/m/n/10 You can ac-cess the par-entsets us-ing \OT1/cmtt/m/n/10 bayesNe t.getParentSet(iAttribute) Overfull \hbox (10.74715pt too wide) in paragraph at lines 1251--1255 \OT1/cmtt/m/n/10 bayesNet.getParentSet(iAttribute).AddParent(iParent, instances ) Overfull \hbox (36.44255pt too wide) in paragraph at lines 1256--1264 []\OT1/cmr/m/n/10 Alternatively, im-ple-ment \OT1/cmtt/m/n/10 public void searc h(BayesNet bayesNet, Instances [30] Overfull \hbox (2.57175pt too wide) in paragraph at lines 1285--1289 \OT1/cmtt/m/n/10 weka.classifiers.bayes.net.estimate.BayesNetEstimator\OT1/cmr/ m/n/10 . Let's say Overfull \hbox (29.2748pt too wide) in paragraph at lines 1290--1295 \OT1/cmtt/m/n/10 public void updateClassifier(BayesNet bayesNet, Instance insta nce)\OT1/cmr/m/n/10 , Overfull \hbox (31.74696pt too wide) in paragraph at lines 1290--1295 \OT1/cmtt/m/n/10 public double[] distributionForInstance(BayesNet bayesNet, Ins tance Overfull \hbox (7.02576pt too wide) in paragraph at lines 1312--1316 \OT1/cmr/m/n/10 Use the class \OT1/cmtt/m/n/10 weka.filters.unsupervised.attrib ute.Discretize \OT1/cmr/m/n/10 to dis-cretize Overfull \hbox (27.74675pt too wide) in paragraph at lines 1312--1316 \OT1/cmtt/m/n/10 java weka.filters.unsupervised.attribute.Discretize -B 3 -i in file.arff [31] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1323--1327 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -B -N 10 -A 9 -C Overfull \hbox (1.49698pt too wide) in paragraph at lines 1329--1333 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -N 15 -A 20 -C 3 Overfull \hbox (22.4968pt too wide) in paragraph at lines 1335--1339 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -F alarm.xml -M 1000 [32] Overfull \hbox (5.66734pt too wide) in paragraph at lines 1399--1403 []\OT1/cmr/m/n/10 Only leave-one-out, k-fold and cu-mu-la-tive cross-validation are im-ple-mented. Overfull \hbox (8.08392pt too wide) in paragraph at lines 1399--1403 \OT1/cmr/m/n/10 These im-ple-men-ta-tions can be made more ef-fi-cient and othe r cross-validation [33] [34] (./bayesnet.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on bayesnet.dvi (35 pages, 75388 bytes). Transcript written on bayesnet.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./bayesnet.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/graphics/epsfig.sty (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty) (/etc/texmf/tex/latex/config/graphics.cfg) (/usr/share/texmf-texlive/tex/latex/graphics/dvips.def)))) (./bayesnet.aux) (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1] Overfull \hbox (4.61742pt too wide) in paragraph at lines 28--30 []\OT1/cmr/m/n/9 Various Bayesian net-work clas-si-fier learn-ing al-go-rithms are im-ple-mented [1] (./bayesnet.toc) [2] [3] [4] [5] Overfull \hbox (1.83237pt too wide) in paragraph at lines 210--215 \OT1/cmr/m/n/10 ent from the ADTree clas-si-fier al-go-rithm from \OT1/cmtt/m/n /10 weka.classifiers.tree.ADTree\OT1/cmr/m/n/10 . [6] [7] [8] Underfull \hbox (badness 10000) in paragraph at lines 361--366 [9] Underfull \hbox (badness 10000) in paragraph at lines 382--386 Underfull \hbox (badness 10000) in paragraph at lines 391--406 [10] Overfull \hbox (2.84462pt too wide) in paragraph at lines 408--408 []\OT1/cmr/bx/n/14.4 Conditional in-de-pen-dence test based struc-ture [11] Overfull \hbox (106.49606pt too wide) in paragraph at lines 456--456 [] \OT1/cmtt/m/n/10 Rule 5: if no edges are directed then take a rand om one (first we can find)[] Underfull \hbox (badness 10000) in paragraph at lines 464--472 [12] [13] [14] [15] Overfull \hbox (28.27066pt too wide) in paragraph at lines 627--627 [] \OT1/cmtt/m/n/9 Sets test file. If missing, a cross-validation will b e performed on the[] [16] Overfull \hbox (14.09583pt too wide) in paragraph at lines 627--627 [] \OT1/cmtt/m/n/9 Retrieves the options from the XML-data instead of th e command line.[] [17] Overfull \hbox (57.99673pt too wide) in paragraph at lines 674--674 [] \OT1/cmtt/m/n/10 Use tournament selection (true) or maximum subpopul atin (false).[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 674--674 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 674--674 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 674--674 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 691--691 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 691--691 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 691--691 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 708--708 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 708--708 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 708--708 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [18] Overfull \hbox (42.24687pt too wide) in paragraph at lines 729--729 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 729--729 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 729--729 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 750--750 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 750--750 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 750--750 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [19] Overfull \hbox (42.24687pt too wide) in paragraph at lines 768--768 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 768--768 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 768--768 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 794--794 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 794--794 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 794--794 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 804--804 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 804--804 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 804--804 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [20] Overfull \hbox (42.24687pt too wide) in paragraph at lines 814--814 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 814--814 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 814--814 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 When determining whether an edge exists a search is performed[] Overfull \hbox (52.74678pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 for a set Z that separates the nodes. MaxCardinalit y determines[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 the maximum size of the set Z. This greatly influen ces the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (57.99673pt too wide) in paragraph at lines 859--859 [] \OT1/cmtt/m/n/10 Use tournament selection (true) or maximum subpopul atin (false).[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 859--859 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] [21] Overfull \hbox (31.74696pt too wide) in paragraph at lines 859--859 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 859--859 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 879--879 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 879--879 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 879--879 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 899--899 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 899--899 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 899--899 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [22] Overfull \hbox (42.24687pt too wide) in paragraph at lines 923--923 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 923--923 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 923--923 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 944--944 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 944--944 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 944--944 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [23] Overfull \hbox (42.24687pt too wide) in paragraph at lines 973--973 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 973--973 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 973--973 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 986--986 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 986--986 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 986--986 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (10.74715pt too wide) in paragraph at lines 991--991 [] \OT1/cmtt/m/n/10 Name of file containing network structure in BIF fo rmat[] [24] [25] Overfull \hbox (641.9914pt too wide) in paragraph at lines 1073--1073 []\OT1/cmtt/m/n/10 Scheme: weka.classifiers.bayes.BayesNet -D -B iris.xml -Q weka.classifiers.bayes.net.search.local.K2 -- -P 2 -S BAYES -E weka.classif iers.bayes.net.estimate.SimpleEstimator -- -A 0.5[] Overfull \hbox (106.49606pt too wide) in paragraph at lines 1091--1091 []\OT1/cmtt/m/n/10 Relation: iris-weka.filters.unsupervised.attribute.Discr etize-B2-M-1.0-Rfirst-last[] [26] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1153--1153 []\OT1/cmtt/m/n/10 Correctly Classified Instances 116 77. 3333 %[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1153--1153 []\OT1/cmtt/m/n/10 Incorrectly Classified Instances 34 22. 6667 %[] [27] [28] [29] Overfull \hbox (76.10909pt too wide) in paragraph at lines 1238--1244 []\OT1/cmr/m/n/10 Create a class that de-rives from \OT1/cmtt/m/n/10 weka.class ifiers.bayes.net.search.SearchAlgorithm\OT1/cmr/m/n/10 . Overfull \hbox (6.74959pt too wide) in paragraph at lines 1238--1244 \OT1/cmr/m/n/10 validation based, you prob-a-bly want to de-rive from \OT1/cmtt /m/n/10 ScoreSearchAlgorithm\OT1/cmr/m/n/10 , Overfull \hbox (56.55356pt too wide) in paragraph at lines 1238--1244 \OT1/cmtt/m/n/10 CISearchAlgorithm \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 CVSearch Algorithm \OT1/cmr/m/n/10 in-stead of de-riv-ing from \OT1/cmtt/m/n/10 SearchAl gorithm Overfull \hbox (29.2748pt too wide) in paragraph at lines 1245--1250 \OT1/cmtt/m/n/10 public void buildStructure(BayesNet bayesNet, Instances instan ces)\OT1/cmr/m/n/10 . Overfull \hbox (6.05424pt too wide) in paragraph at lines 1245--1250 \OT1/cmr/m/n/10 You can ac-cess the par-entsets us-ing \OT1/cmtt/m/n/10 bayesNe t.getParentSet(iAttribute) Overfull \hbox (10.74715pt too wide) in paragraph at lines 1251--1255 \OT1/cmtt/m/n/10 bayesNet.getParentSet(iAttribute).AddParent(iParent, instances ) Overfull \hbox (36.44255pt too wide) in paragraph at lines 1256--1264 []\OT1/cmr/m/n/10 Alternatively, im-ple-ment \OT1/cmtt/m/n/10 public void searc h(BayesNet bayesNet, Instances [30] Overfull \hbox (2.57175pt too wide) in paragraph at lines 1285--1289 \OT1/cmtt/m/n/10 weka.classifiers.bayes.net.estimate.BayesNetEstimator\OT1/cmr/ m/n/10 . Let's say Overfull \hbox (29.2748pt too wide) in paragraph at lines 1290--1295 \OT1/cmtt/m/n/10 public void updateClassifier(BayesNet bayesNet, Instance insta nce)\OT1/cmr/m/n/10 , Overfull \hbox (31.74696pt too wide) in paragraph at lines 1290--1295 \OT1/cmtt/m/n/10 public double[] distributionForInstance(BayesNet bayesNet, Ins tance Overfull \hbox (7.02576pt too wide) in paragraph at lines 1312--1316 \OT1/cmr/m/n/10 Use the class \OT1/cmtt/m/n/10 weka.filters.unsupervised.attrib ute.Discretize \OT1/cmr/m/n/10 to dis-cretize Overfull \hbox (27.74675pt too wide) in paragraph at lines 1312--1316 \OT1/cmtt/m/n/10 java weka.filters.unsupervised.attribute.Discretize -B 3 -i in file.arff [31] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1323--1327 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -B -N 10 -A 9 -C Overfull \hbox (1.49698pt too wide) in paragraph at lines 1329--1333 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -N 15 -A 20 -C 3 Overfull \hbox (22.4968pt too wide) in paragraph at lines 1335--1339 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -F alarm.xml -M 1000 [32] Overfull \hbox (5.66734pt too wide) in paragraph at lines 1399--1403 []\OT1/cmr/m/n/10 Only leave-one-out, k-fold and cu-mu-la-tive cross-validation are im-ple-mented. Overfull \hbox (8.08392pt too wide) in paragraph at lines 1399--1403 \OT1/cmr/m/n/10 These im-ple-men-ta-tions can be made more ef-fi-cient and othe r cross-validation [33] [34] (./bayesnet.aux) ) (see the transcript file for additional information) Output written on bayesnet.dvi (35 pages, 76032 bytes). Transcript written on bayesnet.log. # experimenter ( cd wekadocs/experimentertutorial && \ latex tutorial.tex ; latex tutorial.tex ;\ dvipdf tutorial.dvi ) This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./tutorial.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/graphics/epsfig.sty (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty) (/etc/texmf/tex/latex/config/graphics.cfg) (/usr/share/texmf-texlive/tex/latex/graphics/dvips.def)))) No file tutorial.aux. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1] No file tutorial.toc. [1] LaTeX Warning: Citation `wekadoc' on page 2 undefined on input line 69. [2] [3] [4] [5] LaTeX Warning: Citation `quinlan' on page 6 undefined on input line 172. LaTeX Warning: Citation `bengio' on page 6 undefined on input line 174. [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] Overfull \hbox (74.99634pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 @attribute Key_Scheme {weka.classifiers.rules.ZeroR,weka.cl assifiers.trees.J48}[] Overfull \hbox (38.24666pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 @attribute Key_Scheme_version_ID {48055541465867954,-217733 168393644444}[] [16] Overfull \hbox (1.49698pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 @attribute Summary {'Number of leaves: 3\nSize of the tree: 5\n',[] Overfull \hbox (48.74657pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 iris,1,weka.classifiers.rules.ZeroR,,48055541465867954,2005 1221.033,99,51,[] Overfull \hbox (69.74638pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 17,34,0,33.333333,66.666667,0,0,0.444444,0.471405,100,100,8 0.833088,80.833088,[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 0,1.584963,1.584963,0,0,0,0,1,17,1,34,0,0,0,0,0.333333,1,0. 5,0.5,0,0,?,?,?,?[] [17] [18] [19] [20] [21] [22] Overfull \hbox (38.24666pt too wide) in paragraph at lines 556--556 []\OT1/cmtt/m/n/10 ClassifierSplitEvaluator: weka.classifiers.trees.J48 -C 0.25 -M 2(version[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 556--556 []\OT1/cmtt/m/n/10 Correctly Classified Instances 47 92. 1569 %[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 556--556 []\OT1/cmtt/m/n/10 Incorrectly Classified Instances 4 7. 8431 %[] [23] [24] [25] Overfull \hbox (0.2135pt too wide) in paragraph at lines 604--605 []\OT1/cmr/m/n/10 As with the other Re-sult-Pro-duc-ers, ad-di-tional schemes c an be de-fined. When [26] [27] [28] LaTeX Warning: Citation `hsql' on page 29 undefined on input line 626. LaTeX Warning: Citation `mysql' on page 29 undefined on input line 626. Overfull \hbox (17.30408pt too wide) in paragraph at lines 645--646 []\OT1/cmr/m/n/10 Additional jar archives, i.e., JDBC drivers, are stored in \O T1/cmtt/m/n/10 /home/johndoe/jars\OT1/cmr/m/n/10 . LaTeX Warning: Citation `cvs' on page 29 undefined on input line 649. [29] LaTeX Warning: Citation `cvs' on page 30 undefined on input line 692. Overfull \hbox (12.8892pt too wide) in paragraph at lines 696--697 []\OT1/cmr/m/n/10 Create a script, called \OT1/cmtt/m/n/10 /home/johndoe/remote []engine/startRemoteEngine\OT1/cmr/m/n/10 , Overfull \hbox (22.24724pt too wide) in paragraph at lines 704--704 [] \OT1/cmtt/m/n/10 -classpath /home/johndoe/jars/hsqldb.jar:remoteEngine.jar \[] Overfull \hbox (16.99728pt too wide) in paragraph at lines 712--712 [] \OT1/cmtt/m/n/10 -classpath /home/johndoe/jars/mysql.jar:remoteEngine.jar \[] [30] Overfull \hbox (75.70413pt too wide) in paragraph at lines 737--738 []\OT1/cmr/m/n/10 Edit this file and change the "\OT1/cmtt/m/n/9 jdbcURL=jdbc:h sqldb:hsql://server[]name/database[]name\OT1/cmr/m/n/9 " Overfull \hbox (11.41405pt too wide) in paragraph at lines 737--738 \OT1/cmr/m/n/9 server (e.g., \OT1/cmtt/m/n/9 jdbcURL=jdbc:hsqldb:hsql://dodo.co mpany.com/experiment\OT1/cmr/m/n/9 ). Overfull \hbox (89.44553pt too wide) in paragraph at lines 744--744 [] \OT1/cmtt/m/n/9 -cp /home/johndoe/jars/hsqldb.jar:remoteEngine.jar:/home/j ohndoe/weka/weka.jar \[] Overfull \hbox (70.97919pt too wide) in paragraph at lines 750--751 []\OT1/cmr/m/n/10 Edit this file and change the "\OT1/cmtt/m/n/9 jdbcURL=jdbc:m ysql://server[]name:3306/database[]name\OT1/cmr/m/n/9 " Overfull \hbox (84.72058pt too wide) in paragraph at lines 757--757 [] \OT1/cmtt/m/n/9 -cp /home/johndoe/jars/mysql.jar:remoteEngine.jar:/home/jo hndoe/weka/weka.jar \[] [31] Overfull \hbox (10.74715pt too wide) in paragraph at lines 787--788 []\OT1/cmtt/m/n/10 01:13:19: RemoteExperiment (//blabla.company.com/RemoteEngin e) Overfull \hbox (9.27715pt too wide) in paragraph at lines 787--788 \OT1/cmtt/m/n/10 java.sql.SQLException: Table already exists: EXPERIMENT[]INDEX Overfull \hbox (2.55719pt too wide) in paragraph at lines 787--788 \OT1/cmtt/m/n/10 LONGVARCHAR, Experiment[]setup LONGVARCHAR, Result[]table INT )] Overfull \hbox (5.4972pt too wide) in paragraph at lines 789--790 \OT1/cmtt/m/n/10 (//blabla.company.com/RemoteEngine) (sub)experiment (datataset Overfull \hbox (5.4972pt too wide) in paragraph at lines 789--790 \OT1/cmtt/m/n/10 vineyard.arff) failed : java.sql.SQLException: Table already Overfull \hbox (11.5871pt too wide) in paragraph at lines 789--790 \OT1/cmtt/m/n/10 Experiment[]index ( Experiment[]type LONGVARCHAR, Experiment[] setup LaTeX Warning: Citation `cvs' on page 32 undefined on input line 795. [32] [33] [34] [35] [36] LaTeX Warning: Citation `bengio' on page 37 undefined on input line 889. LaTeX Warning: Citation `witten' on page 37 undefined on input line 889. [37] [38] [39] (./tutorial.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on tutorial.dvi (40 pages, 58832 bytes). Transcript written on tutorial.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./tutorial.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/graphics/epsfig.sty (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty) (/etc/texmf/tex/latex/config/graphics.cfg) (/usr/share/texmf-texlive/tex/latex/graphics/dvips.def)))) (./tutorial.aux) (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1] (./tutorial.toc) [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] Overfull \hbox (74.99634pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 @attribute Key_Scheme {weka.classifiers.rules.ZeroR,weka.cl assifiers.trees.J48}[] Overfull \hbox (38.24666pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 @attribute Key_Scheme_version_ID {48055541465867954,-217733 168393644444}[] [16] Overfull \hbox (1.49698pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 @attribute Summary {'Number of leaves: 3\nSize of the tree: 5\n',[] Overfull \hbox (48.74657pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 iris,1,weka.classifiers.rules.ZeroR,,48055541465867954,2005 1221.033,99,51,[] Overfull \hbox (69.74638pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 17,34,0,33.333333,66.666667,0,0,0.444444,0.471405,100,100,8 0.833088,80.833088,[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 429--429 [] \OT1/cmtt/m/n/10 0,1.584963,1.584963,0,0,0,0,1,17,1,34,0,0,0,0,0.333333,1,0. 5,0.5,0,0,?,?,?,?[] [17] [18] [19] [20] [21] [22] Overfull \hbox (38.24666pt too wide) in paragraph at lines 556--556 []\OT1/cmtt/m/n/10 ClassifierSplitEvaluator: weka.classifiers.trees.J48 -C 0.25 -M 2(version[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 556--556 []\OT1/cmtt/m/n/10 Correctly Classified Instances 47 92. 1569 %[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 556--556 []\OT1/cmtt/m/n/10 Incorrectly Classified Instances 4 7. 8431 %[] [23] [24] [25] Overfull \hbox (0.2135pt too wide) in paragraph at lines 604--605 []\OT1/cmr/m/n/10 As with the other Re-sult-Pro-duc-ers, ad-di-tional schemes c an be de-fined. When [26] [27] [28] Overfull \hbox (17.30408pt too wide) in paragraph at lines 645--646 []\OT1/cmr/m/n/10 Additional jar archives, i.e., JDBC drivers, are stored in \O T1/cmtt/m/n/10 /home/johndoe/jars\OT1/cmr/m/n/10 . [29] Overfull \hbox (12.8892pt too wide) in paragraph at lines 696--697 []\OT1/cmr/m/n/10 Create a script, called \OT1/cmtt/m/n/10 /home/johndoe/remote []engine/startRemoteEngine\OT1/cmr/m/n/10 , Overfull \hbox (22.24724pt too wide) in paragraph at lines 704--704 [] \OT1/cmtt/m/n/10 -classpath /home/johndoe/jars/hsqldb.jar:remoteEngine.jar \[] Overfull \hbox (16.99728pt too wide) in paragraph at lines 712--712 [] \OT1/cmtt/m/n/10 -classpath /home/johndoe/jars/mysql.jar:remoteEngine.jar \[] [30] Overfull \hbox (75.70413pt too wide) in paragraph at lines 737--738 []\OT1/cmr/m/n/10 Edit this file and change the "\OT1/cmtt/m/n/9 jdbcURL=jdbc:h sqldb:hsql://server[]name/database[]name\OT1/cmr/m/n/9 " Overfull \hbox (11.41405pt too wide) in paragraph at lines 737--738 \OT1/cmr/m/n/9 server (e.g., \OT1/cmtt/m/n/9 jdbcURL=jdbc:hsqldb:hsql://dodo.co mpany.com/experiment\OT1/cmr/m/n/9 ). Overfull \hbox (89.44553pt too wide) in paragraph at lines 744--744 [] \OT1/cmtt/m/n/9 -cp /home/johndoe/jars/hsqldb.jar:remoteEngine.jar:/home/j ohndoe/weka/weka.jar \[] Overfull \hbox (70.97919pt too wide) in paragraph at lines 750--751 []\OT1/cmr/m/n/10 Edit this file and change the "\OT1/cmtt/m/n/9 jdbcURL=jdbc:m ysql://server[]name:3306/database[]name\OT1/cmr/m/n/9 " Overfull \hbox (84.72058pt too wide) in paragraph at lines 757--757 [] \OT1/cmtt/m/n/9 -cp /home/johndoe/jars/mysql.jar:remoteEngine.jar:/home/jo hndoe/weka/weka.jar \[] [31] Overfull \hbox (10.74715pt too wide) in paragraph at lines 787--788 []\OT1/cmtt/m/n/10 01:13:19: RemoteExperiment (//blabla.company.com/RemoteEngin e) Overfull \hbox (9.27715pt too wide) in paragraph at lines 787--788 \OT1/cmtt/m/n/10 java.sql.SQLException: Table already exists: EXPERIMENT[]INDEX Overfull \hbox (2.55719pt too wide) in paragraph at lines 787--788 \OT1/cmtt/m/n/10 LONGVARCHAR, Experiment[]setup LONGVARCHAR, Result[]table INT )] Overfull \hbox (5.4972pt too wide) in paragraph at lines 789--790 \OT1/cmtt/m/n/10 (//blabla.company.com/RemoteEngine) (sub)experiment (datataset Overfull \hbox (5.4972pt too wide) in paragraph at lines 789--790 \OT1/cmtt/m/n/10 vineyard.arff) failed : java.sql.SQLException: Table already Overfull \hbox (11.5871pt too wide) in paragraph at lines 789--790 \OT1/cmtt/m/n/10 Experiment[]index ( Experiment[]type LONGVARCHAR, Experiment[] setup [32] [33] [34] [35] [36] [37] [38] [39] (./tutorial.aux) ) (see the transcript file for additional information) Output written on tutorial.dvi (40 pages, 66320 bytes). Transcript written on tutorial.log. # explorer ( cd wekadocs/explorerguide && \ latex guide.tex; latex guide.tex ;\ dvipdf guide.dvi ) This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./guide.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/graphics/epsfig.sty (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty) (/etc/texmf/tex/latex/config/graphics.cfg) (/usr/share/texmf-texlive/tex/latex/graphics/dvips.def)))) ! LaTeX Error: File `wrapfig.sty' not found. Type X to quit or to proceed, or enter new name. (Default extension: sty) Enter file name: ! Emergency stop. l.7 ^^M No pages of output. Transcript written on guide.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./guide.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/graphics/epsfig.sty (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty) (/etc/texmf/tex/latex/config/graphics.cfg) (/usr/share/texmf-texlive/tex/latex/graphics/dvips.def)))) ! LaTeX Error: File `wrapfig.sty' not found. Type X to quit or to proceed, or enter new name. (Default extension: sty) Enter file name: ! Emergency stop. l.7 ^^M No pages of output. Transcript written on guide.log. dvips: ! DVI file can't be opened. # knowledgeflow ( cd wekadocs/knowledgeflowtutorial && \ latex tutorial.tex ; latex tutorial.tex ;\ dvipdf tutorial.dvi ) This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./tutorial.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/graphics/epsfig.sty (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty) (/etc/texmf/tex/latex/config/graphics.cfg) (/usr/share/texmf-texlive/tex/latex/graphics/dvips.def)))) No file tutorial.aux. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1] No file tutorial.toc. [1] LaTeX Warning: Citation `wekadoc' on page 2 undefined on input line 87. [2] [3] [4] LaTeX Warning: Reference `exampleroc' on page 5 undefined on input line 154. Overfull \hbox (36.43697pt too wide) in paragraph at lines 155--157 []\OT1/cmr/m/it/10 ClassifierPerformanceEvaluator \OT1/cmr/m/n/10 - eval-u-ate the per-for-mance of batch trained/tested Overfull \hbox (35.54247pt too wide) in paragraph at lines 159--161 []\OT1/cmr/m/it/10 ClustererPerformanceEvaluator \OT1/cmr/m/n/10 - eval-u-ate t he per-for-mance of batch trained/tested [5] [6] [7] [8] LaTeX Warning: Citation `multipleroc' on page 9 undefined on input line 287. Overfull \hbox (11.53027pt too wide) in paragraph at lines 290--291 [] [9] [10] Overfull \hbox (12.05772pt too wide) in paragraph at lines 375--377 \OT1/cmtt/m/n/9 http://weka.sourceforge.net/wiki/index.php/Plotting[]multiple[] ROC[]curves [11] (./tutorial.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on tutorial.dvi (12 pages, 19844 bytes). Transcript written on tutorial.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./tutorial.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. 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Transcript written on tutorial.log. touch debian/stamp-build-weka-doc /usr/bin/fakeroot debian/rules binary test -x debian/rules dh_testroot dh_clean -k dh_installdirs -A mkdir -p "." DEB_ANT_CHECK_TARGET unset, not running checks DEB_ANT_INSTALL_TARGET unset, skipping default ant.mk common-install target dh_installdirs -pweka install -m644 -D dist/weka.jar debian/weka/usr/share/java/weka-3.5.7+tut1.jar dh_link -pweka /usr/share/java/weka-3.5.7+tut1.jar /usr/share/java/weka.jar dh_installdirs -pweka-doc #main overview page install -m755 -d debian/weka-doc/usr/share/doc/weka-doc install -m644 documentation.css documentation.html weka.gif -t debian/weka-doc/usr/share/doc/weka-doc/ #javadoc cp -r doc debian/weka-doc/usr/share/doc/weka-doc/ #pdf's install -m644 wekadocs/bayesnet/bayesnet.pdf debian/weka-doc/usr/share/doc/weka-doc/BayesianNetClassifiers.pdf install -m644 wekadocs/explorerguide/guide.pdf debian/weka-doc/usr/share/doc/weka-doc/ExplorerGuide.pdf install -m644 wekadocs/experimentertutorial/tutorial.pdf debian/weka-doc/usr/share/doc/weka-doc/ExperimenterTutorial.pdf install -m644 wekadocs/knowledgeflowtutorial/tutorial.pdf debian/weka-doc/usr/share/doc/weka-doc/KnowledgeFlowTutorial.pdf touch debian/stamp-install-weka-doc dh_installdocs -pweka ./README dh_installexamples -pweka dh_installman -pweka dh_installinfo -pweka dh_installmenu -pweka dh_installcron -pweka dh_installinit -pweka dh_installdebconf -pweka dh_installemacsen -pweka dh_installcatalogs -pweka dh_installpam -pweka dh_installlogrotate -pweka dh_installlogcheck -pweka dh_installchangelogs -pweka dh_installudev -pweka dh_lintian -pweka dh_install -pweka dh_link -pweka dh_installmime -pweka dh_installdocs -pweka-doc ./README dh_installexamples -pweka-doc dh_installman -pweka-doc dh_installinfo -pweka-doc dh_installmenu -pweka-doc dh_installcron -pweka-doc dh_installinit -pweka-doc dh_installdebconf -pweka-doc dh_installemacsen -pweka-doc dh_installcatalogs -pweka-doc dh_installpam -pweka-doc dh_installlogrotate -pweka-doc dh_installlogcheck -pweka-doc dh_installchangelogs -pweka-doc dh_installudev -pweka-doc dh_lintian -pweka-doc dh_install -pweka-doc dh_link -pweka-doc dh_installmime -pweka-doc dh_strip -pweka dh_strip debug symbol extraction: all non-arch-all packages for this build platform i386: dh_strip debug symbol extraction: packages to act on: dh_strip debug symbol extraction: ignored packages: dh_compress -pweka -X .pdf dh_fixperms -pweka dh_makeshlibs -pweka dh_strip -pweka-doc dh_strip debug symbol extraction: all non-arch-all packages for this build platform i386: dh_strip debug symbol extraction: packages to act on: dh_strip debug symbol extraction: ignored packages: dh_compress -pweka-doc -X .pdf dh_fixperms -pweka-doc dh_makeshlibs -pweka-doc dh_installdeb -pweka dh_perl -pweka dh_shlibdeps -pweka dh_installdeb -pweka-doc dh_perl -pweka-doc dh_shlibdeps -pweka-doc dh_gencontrol -pweka dpkg-gencontrol: warning: unknown substitution variable ${shlibs:Depends} dpkg-gencontrol: warning: unknown substitution variable ${misc:Depends} # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/weka/usr/share/doc ] || \ [ ! -d debian/weka/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/weka/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/weka/usr/share/doc/weka; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/weka/usr/share/doc/weka/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in weka to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/weka/usr/share/gnome/help ]; then \ cd debian/weka && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p weka dh_md5sums -pweka dh_builddeb -pweka pkgstriptranslations: processing control file: ./debian/weka/DEBIAN/control, package weka, directory ./debian/weka pkgstriptranslations: weka does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `debian/weka/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `weka' in `../weka_3.5.7+tut1-1_all.deb'. dh_gencontrol -pweka-doc # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/weka-doc/usr/share/doc ] || \ [ ! -d debian/weka-doc/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/weka-doc/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/weka-doc/usr/share/doc/weka-doc; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/weka-doc/usr/share/doc/weka-doc/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in weka-doc to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/weka-doc/usr/share/gnome/help ]; then \ cd debian/weka-doc && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p weka-doc dh_md5sums -pweka-doc dh_builddeb -pweka-doc pkgstriptranslations: processing control file: ./debian/weka/DEBIAN/control, package weka, directory ./debian/weka pkgstriptranslations: weka does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/weka-doc/DEBIAN/control, package weka-doc, directory ./debian/weka-doc pkgstriptranslations: weka-doc does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `debian/weka-doc/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `weka-doc' in `../weka-doc_3.5.7+tut1-1_all.deb'. dpkg-genchanges -b -mUbuntu/i386 Build Daemon >../weka_3.5.7+tut1-1_i386.changes dpkg-genchanges: binary-only upload - not including any source code dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20080626-1419 chroot-autobuild/build/buildd/weka_3.5.7+tut1-1_all.deb: new debian package, version 2.0. size 3944898 bytes: control archive= 1354 bytes. 1052 bytes, 24 lines control 1248 bytes, 17 lines md5sums Package: weka Version: 3.5.7+tut1-1 Architecture: all Maintainer: Ubuntu MOTU Developers Original-Maintainer: Soeren Sonnenburg Installed-Size: 4740 Depends: sun-java6-jre Section: contrib/science Priority: optional Homepage: http://www.cs.waikato.ac.nz/~ml/weka/ Description: Machine learning algorithms for data mining tasks Weka is a collection of machine learning algorithms in Java that can either be used from the command-line, or called from your own Java code. Weka is also ideally suited for developing new machine learning schemes. . Implemented schemes cover decision tree inducers, rule learners, model tree generators, support vector machines, locally weighted regression, instance-based learning, bagging, boosting, and stacking. Also included are clustering methods, and an association rule learner. Apart from actual learning schemes, Weka also contains a large variety of tools that can be used for pre-processing datasets. . This package contains the binaries and examples. chroot-autobuild/build/buildd/weka-doc_3.5.7+tut1-1_all.deb: new debian package, version 2.0. size 4786402 bytes: control archive= 38567 bytes. 1052 bytes, 25 lines control 136554 bytes, 1308 lines md5sums 204 bytes, 7 lines * postinst #!/bin/sh 208 bytes, 8 lines * prerm #!/bin/sh Package: weka-doc Source: weka Version: 3.5.7+tut1-1 Architecture: all Maintainer: Ubuntu MOTU Developers Original-Maintainer: Soeren Sonnenburg Installed-Size: 40104 Recommends: weka Section: contrib/doc Priority: optional Homepage: http://www.cs.waikato.ac.nz/~ml/weka/ Description: Machine learning algorithms for data mining tasks Weka is a collection of machine learning algorithms in Java that can either be used from the command-line, or called from your own Java code. Weka is also ideally suited for developing new machine learning schemes. . Implemented schemes cover decision tree inducers, rule learners, model tree generators, support vector machines, locally weighted regression, instance-based learning, bagging, boosting, and stacking. Also included are clustering methods, and an association rule learner. Apart from actual learning schemes, Weka also contains a large variety of tools that can be used for pre-processing datasets. . 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data mining tasks Changes: weka (3.5.7+tut1-1) unstable; urgency=low . * Updated weka script to support calling other main classes, add jvm memory option and allow specific gui. * Update manpage for weka script, documenting the new options. * Fetch tutorial sources from public svn, generate them dynamically on build and include generated .pdfs in doc-base. 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Processing triggers for libc6 ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20080626-1420 Build needed 00:03:39, 162004k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '651382-1635875'] Scanning for processes to kill in build 651382-1635875... Scanning for processes to kill in build /home/buildd/build-651382-1635875/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '651382-1635875'] Unmounting chroot for build 651382-1635875... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '651382-1635875'] Removing build 651382-1635875