Copyright for r-base source package in Bionic

This is the Debian GNU/Linux r-base package of the GNU R system for
statistical computing and graphics.

R has a home page at `http://www.r-project.org/'.  It is free software
distributed under a GNU-style copyleft, and an official part of the GNU
project ("GNU S").

This package was initially debianized by Douglas Bates bates@stat.wisc.edu on
Wed, 10 Dec 1997 14:17:31 -0600. 

Dirk Eddelbuettel  currently maintaines the package.  

Sources were downloaded from http://cran.r-project.org/src/ and changes,
typically only to files in the debian/ directory are fully documented in the
file /usr/share/doc/r-base/changelog.Debian.gz.

R was initially written by Robert Gentleman and Ross Ihaka of the
Statistics Department of the University of Auckland.
Since mid-1997 there has been a core group with write access to the R
source, currently consisting of
Douglas Bates		
John Chambers		
Peter Dalgaard		
Seth Falcon		
Robert Gentleman	
Kurt Hornik		
Stefano Iacus		
Ross Ihaka		
Friedrich Leisch	
Thomas Lumley		
Martin Maechler		
Duncan Murdoch		
Paul Murrell		
Martyn Plummer		
Brian Ripley		
Deepayan Sarkar		
Duncan Temple Lang	
Luke Tierney		
Simon Urbanek		
plus Heiner Schwarte  up to October 1999
and Guido Masarotto  up to June 2003.

Copyright (C) 1995, 1996  Robert Gentleman and Ross Ihaka 
Copyright (C) 1995 - 2008 The R Development Core Team
Copyright (C) 1995 - 2008 The R Core Development Team
Copyright (C) 2002 - 2008 The R Foundation

As a rought breakdown between R Core members (and not excluding
double-counting), we have for R 2.7.0 and the src/ directory 

   1276 files with Copyright (C) The R Development Core Team
    338 files with Copyright (C) The R Core Development Team
    287 files with Copyright (C) Ross Ihaka
    215 files with Copyright (C) The R Foundation
    201 files with Copyright (C) Robert Gentleman
     33 files with Copyright (C) Brian D. Ripley
     29 files with Copyright (C) Guido Masarotto
     13 files with Copyright (C) Paul Murrell
      5 files with Copyright (C) Martin Maechler
      4 files with Copyright (C) Douglas M. Bates
      1 file  with Copyright (C) Friedrich Leisch
      1 file  with Copyright (C) Martyn Plummer
      1 file  with Copyright (C) Deepayan Sarkar
      1 file  with Copyright (C) Luke Tierney
      
As for non-R Core members

      4 files with Copyright (C) Adrian Trapletti
      3 files with Copyright (C) Jose C. Pinheiro
      2 files with Copyright (C) Berwin A. Turlach

License: GPL-2
Portions License: LGPL
Portions License: Artistic

R ships with the following file doc/COPYRIGHTS and refers to doc/COPYING, a 
copy of the GPL-2.

========= begin doc/COPYRIGHTS ==============================================

COPYRIGHT STATUS

The bulk of this code is copyright by members of or all of the R
Development Core Team.

See the file COPYING for the exact conditions under which you may
redistribute it.

The status of files used only in the Windows port is in file
src/gnuwin32/COPYRIGHTS.win, which is appended to this file in binary
Windows distributions.

	---------------------------------------------------

The some of the public header files are distributed under the more
permissive terms of the file COPYING.LIB.  This applies only to the
files

src/include/R.h
src/include/Rdefines.h
src/include/Rgraphics.h
src/include/Rinternals.h
src/include/Rmath.h
src/include/S.h
src/include/R_ext/*.h

From the announcement of the change (2001-Feb-05)

    It came to our attention that some projects are interpreting GPL to
    mean that compiling against the header files or linking against a
    Windows import library brings the compiled code under the scope of
    GPL.  This would mean it would be impossible to distribute binary
    versions of non-GPL packages with compiled code which called entry
    points in the R executable or DLL, of which there are many on CRAN.

    We encourage packages to be distributed under Open Source conditions,
    but accept that this is not possible for some contributions.  Our
    intention is that export files and import libraries be `accessors'
    under clause 5 of the LGPL, so that in most cases no (additional)
    restrictions are imposed by compiling a package using the LGPL-ed
    components of R.

    To avoid any anomalies, the versions of the same files in R versions
    1.0.0 to 1.2.1 may also be used under LGPL or GPL.

As from R 2.3.0 import libraries are no longer used under Windows, and
as from R 2.4.0 fewer export files are used under AIX.


Some contributed files are also covered by the Library General Public License.
These include (see also below)

src/library/stats/R/embed.R
src/library/stats/src/PPsum.c

	---------------------------------------------------




Some of the code contains different copyright statements.  It is used
here in accordance with the copyright conditions in that code.

src/library/grDevices/inst/afm/*___.afm

	Copyright (c) 1984 to 1992 Adobe Systems Incorporated.

src/library/grDevices/inst/afm/MustRead.html
src/library/grDevices/inst/afm/Courier*.afm
src/library/grDevices/inst/afm/Helvetica*.afm
src/library/grDevices/inst/afm/Times*.afm
src/library/grDevices/inst/afm/Symbol.afm
src/library/grDevices/inst/afm/ZapfDingbats.afm

	Copyright (c) 1985, 1987, 1989, 1990, 1993, 1997 Adobe Systems
	Incorporated.  All Rights Reserved.

src/library/grDevices/inst/afm/*l.afm

	Copyright 1999 by (URW)++ Design & Development

src/library/grDevices/inst/afm/CM_*.afm
src/library/grDevices/inst/afm/cm*.afm

	are derived from afms which are copyright by the American
	Mathematical Society, but `the AMS does require that the
	AMS copyright notice be removed from any derivative versions
	of the fonts which have been altered in any way'.

doc/html/search/*.java

	Copyright (C), 1998 Thomas Baier
or	Copyright (C), 1998-2000, Thomas Baier, R Core Development Team

doc/manual/R-intro.texi

	Copyright (C) 1990 W. N. Venables
	Copyright (C) 1992 W. N. Venables & D. M. Smith
	Copyright (C) 1997 R. Gentleman & R. Ihaka
	Copyright (C) 1997, 1998 M. Maechler

share/texmf/upquote.sty

	Copyright 2000 Michael A. Covington.
	Copyright 2003 Michael A. Covington, Frank Mittelbach.

src/library/graphics/R/mosaicplot.R

	Copyright (C) 1998 John W. Emerson

src/library/graphics/R/pairs.R

	In part, Copyright 1999 Dr. Jens Oehlschlaegel-Akiyoshi

src/library/graphics/R/polygon.R

	Copyright (C) 2001 by Kevin Buhr 

src/library/stats/R/bandwidths.R
src/library/stats/src//bandwidths.c
src/appl/maxcol.c

	Copyright (C) various dates W. N. Venables and B. D. Ripley


src/appl/interv.c : moved to API from code originally in
		    src/library/stats/src/bvalue.f, see
		    src/library/stats/COPYRIGHTS.modreg

src/library/stats:

	See the files src/library/stats/COPYRIGHTS.modreg and
	src/library/stats/COPYRIGHTS.portsrc for further details


src/library/stats/R/diffinv.R
src/library/stats/R/embed.R
src/library/stats/R/kernel.R
src/library/stats/src/PPsum.c

	Copyright (C) 1997-1999	 Adrian Trapletti


src/library/stats/src/carray.c, mburg.c, myw.c, qr.c

	Copyright (C) 1999 Martyn Plummer


src/library/stats/R/nls.R

	In part, Copyright 1999-1999 Saikat DebRoy


src/library/stats/R/nlsFunc.R
src/library/stats/R/selfStart.R
src/library/stats/R/zzModels.R

	Copyright 1997,1999 Jose C. Pinheiro

src/library/stats/src/Trunmed.c

	In part Copyright (C) 1995 Berwin A. Turlach

src/library/tcltk/exec/*.tcl

	Copyright (c) various dates Jeffrey Hobbs


src/modules/X11/rotated.[ch]

	Copyright (c) 1993 Alan Richardson


src/appl/loglin.c
src/library/stats/src/chisqsim.c
src/library/stats/src/nscor.c
src/library/stats/src/prho.c
src/library/stats/src/swilk.c
src/library/stats/src/kmns.f
src/library/ts/src/starma.c
src/nmath/pgamma.c
src/nmath/pnbeta.c
src/nmath/pnchisq.c
src/nmath/pnt.c
src/nmath/qbeta.c
src/nmath/qgamma.c
src/nmath/qnorm.c
src/nmath/qtukey.c
src/nmath/sunif.c
  are based in whole or in part on Applied Statistics algorithms
  (C) Royal Statistical Society

src/nmath/stirlerr.c
src/nmath/dbinom.c
src/nmath/dpois.c
  are partly based on Clive Loader's (1999) work,
  (C) 1999-2000 Lucent Technologies, Bell Laboratories.


src/main/RNG.c

  The Mersenne-Twister part is
  Copyright (C) 1997, 1999 Makoto Matsumoto and Takuji Nishimura.


src/main/xspline.c

 * Copyright (c) 1985-1988 by Supoj Sutanthavibul
 * Parts Copyright (c) 1989-2002 by Brian V. Smith
 * Parts Copyright (c) 1991 by Paul King
 * Parts Copyright (c) 1992 by James Tough
 * Parts Copyright (c) 1998 by Georg Stemmer
 * Parts Copyright (c) 1995 by C. Blanc and C. Schlick
  
 * Any party obtaining a copy of these files is granted, free of charge, a
 * full and unrestricted irrevocable, world-wide, paid up, royalty-free,
 * nonexclusive right and license to deal in this software and
 * documentation files (the "Software"), including without limitation the
 * rights to use, copy, modify, merge, publish and/or distribute copies of
 * the Software, and to permit persons who receive copies from any such 
 * party to do so, with the only requirement being that this copyright 
 * notice remain intact.


src/modules/lapack/dlapack[0123].f, cmplx.f, dlamc.f

  Extracted from
  *  -- LAPACK routine (version 3.1) --
  *     Univ. of Tennessee, Univ. of California Berkeley, NAG Ltd.,
  *     Courant Institute, Argonne National Lab, and Rice University

  The README says

    It is freely-available software, and is copyrighted.

  although no actual copyright statement appears in the code.


src/main/vsnprintf.c

  Taken from the wget 1.8.1 distribution: only used on platforms
  without vsnprintf.
  /*
   * Copyright Patrick Powell 1995
   * This code is based on code written by Patrick Powell (papowell@astart.com)
   * It may be used for any purpose as long as this notice remains intact
   * on all source code distributions
   */


src/main/regex.c
   Copyright (C) 2002, 2003, 2004, 2005 Free Software Foundation, Inc.
src/main/Rregex.h
   Copyright (C) 1985,1989-93,1995-98,2000,2001,2002,2003
   Free Software Foundation, Inc.


src/extra/xdr/*

	Copyright (undated) Sun Microsystems, Inc.

	See the file src/extra/xdr/copyrght.txt


src/extra/zlib/README, *.c, *.h

  Taken from zlib-1.2.3 (C) 1995-2005 Jean-loup Gailly and Mark Adler
  See src/extra/zlib/README for the licence.


src/main/dounzip.c, unzip.h

  Contains code Copyright (C) 1998 Gilles Vollant from contrib/minizip
  in the zlib 1.1.3 distribution.


src/main/acosh.c, asinh.c, atanh.c

used as substitution code only.  Based on

  Cephes Math Library Release 2.8:  June, 2000
  Copyright 1984, 1995, 2000 by Stephen L. Moshier

According to http://www.netlib.org/cephes/readme

  What you see here may be used freely but it comes with no support or
  guarantee.


src/main/apse.c
src/main/apse.h

  Copyright (C) Jarkko Hietaniemi, 1998,1999,2000,2001.

  This program is free software; you can redistribute it and/or modify
  it under the terms of either:

  a) the GNU Library General Public License as published by the Free
     Software Foundation; either version 2, or (at your option) any
     later version, or

  b) the "Artistic License" which comes with Perl source code.



src/extra/pcre/LICENCE
src/extra/pcre/*.[ch]

   Copyright (c) 1997-2008 University of Cambridge
   All rights reserved.

See file src/extra/pcre/LICENCE.  For binary builds of R that requires
us to include

  Redistribution and use in source and binary forms, with or without
  modification, are permitted provided that the following conditions are met:

      * Redistributions of source code must retain the above copyright notice,
	this list of conditions and the following disclaimer.

      * Redistributions in binary form must reproduce the above copyright
	notice, this list of conditions and the following disclaimer in the
	documentation and/or other materials provided with the distribution.

      * Neither the name of the University of Cambridge nor the name of Google
	Inc. nor the names of their contributors may be used to endorse or
	promote products derived from this software without specific prior
	written permission.

  THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
  AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
  IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
  ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE
  LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
  CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
  SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
  INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
  CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
  ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
  POSSIBILITY OF SUCH DAMAGE.


src/extra/bzip2/LICENSE
src/extra/bzip2/blocksort.c
src/extra/bzip2/bzlib.c
src/extra/bzip2/bzlib.h
src/extra/bzip2/bzlib_private.h
src/extra/bzip2/compress.c
src/extra/bzip2/crctable.c
src/extra/bzip2/decompress.c
src/extra/bzip2/huffman.c
src/extra/bzip2/randtable.c

   copyright (C) 1996-2007 Julian R Seward.


src/library/tools/src/md5.[ch]

    Copyright (C) 1995, 1996, 2001 Free Software Foundation, Inc.


src/extra/intl/*

Based on gettextize from gettext 0.17
   Copyright (C) various dates Free Software Foundation, Inc.
   Distributed under the GNU Library General Public License
   version 2 or later.

src/include/memcheck.h
src/include/valgrind.h

From valgrind,

   Copyright (C) 2000-2005 Julian Seward.  All rights reserved.


src/main/mkdtemp.c

From glibc via
http://lists.gnu.org/archive/html/bug-gnulib/2003-02/msg00019.html

   Copyright (C) 1999, 2001-2003 Free Software Foundation, Inc.
   Distributed under the GNU Library General Public License
   version 2 or later.

src/main/Rstrptime.c

   Copyright (C) 1996, 1997, 1998, 1999, 2000 Free Software Foundation, Inc.
   Distributed under the GNU Library General Public License
   version 2 or later.

share/perl/File/Copy/Recursive.pm

   Copyright 2004 by Daniel Muey

   This library is free software; you can redistribute it and/or modify
   it under the same terms as Perl itself.


share/perl/Text/Delimiter.pm

   Copyright (C) Small Planet Software and Norman Walsh.
   All rights reserved.  This program is free software; you can
   redistribute it and/or modify it under the same terms as Perl itself.

po/*.po
src/library/*/po/*.po

   Some of the translations are (C) the translator as marked in the files.

COPYING
doc/COPYING
doc/COPYING.LIB
m4/codeset.m4
m4/gettext.m4
m4/gettext-lib.m4
share/licenses/GPL-2
share/licenses/GPL-3
share/licenses/LGPL-2
share/licenses/LGPL-2.1
share/licenses/LGPL-3
src/main/strdup.c
tools/config.quess
tools/config.rpath
tools/config.sub
tools/help2man.pl
tools/ltmain.sh
tools/mdate-sh
tools/missing

   Copyright various dates Free Software Foundation


tools/install-sh:

   Copyright (C) 1994 X Consortium


========= end doc/COPYRIGHTS ================================================


The windows32 port includes the following file src/gnuwin32/COPYRIGHTS.win
========= begin src/gnuwin32/COPYRIGHTS.win =================================

Windows version
===============

src/gnuwin32/e_pow.S

is distributed under the Lesser GNU Public Licence (file COPYING.LIB),
being based closely on code in the GNU C Library.


src/gnuwin32/getline/*

/*
 * Copyright (C) 1991, 1992, 1993 by Chris Thewalt (thewalt@ce.berkeley.edu)
 *
 * Permission to use, copy, modify, and distribute this software 
 * for any purpose and without fee is hereby granted, provided
 * that the above copyright notices appear in all copies and that both the
 * copyright notice and this permission notice appear in supporting
 * documentation.  This software is provided "as is" without express or
 * implied warranty.
 *
 * Thanks to the following people who have provided enhancements and fixes:
 *   Ron Ueberschaer, Christoph Keller, Scott Schwartz, Steven List,
 *   DaviD W. Sanderson, Goran Bostrom, Michael Gleason, Glenn Kasten,
 *   Edin Hodzic, Eric J Bivona, Kai Uwe Rommel, Danny Quah, Ulrich Betzler
 */



src/extra/graphapp/*
src/gnuwin32/front-ends/graphappmain.c

The files {arith, array, bitmap, buttons, context, controls, cursors,
drawing, drawtext, events, fonts, image, init, menus, objects,
strings, windows}.c, {graphapp, internal}.h are in part

	Copyright (C) 1993-1998 Lachlan Patrick
	Distributed under the GNU Library General Public License


src/gnuwin32/psignal.[ch]

Based on files which are
	Freely redistributable and modifiable.  Use at your own risk.
	Copyright 1994-1999 The Downhill Project
	http://www.ede.com/free/u2nt


src/gnuwin32/front-ends/SC_*.h, bdx*.[ch], com_util.[ch], rproxy*.[ch]

	Copyright (C) 1999-2005 Thomas Baier
	Distributed under the GNU Library General Public License
	version 2 or later.



R_HOME/Tcl:

Files compiled and installed from Tcl 8.4.15 and Tk 8.4.15.
see R_HOME/Tcl/license.terms for the license.

    This software is copyrighted by the Regents of the University of
    California, Sun Microsystems, Inc., and other parties. [...]


src/extra/trio/* (except compat.c)

From trio-1.12 (http://daniel.haxx.se/projects/trio/)

 Copyright (C) 1998-2001 by Bjorn Reese and Daniel Stenberg.

 Permission to use, copy, modify, and distribute this software for any
 purpose with or without fee is hereby granted, provided that the above
 copyright notice and this permission notice appear in all copies.

 THIS SOFTWARE IS PROVIDED ``AS IS'' AND WITHOUT ANY EXPRESS OR IMPLIED
 WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES OF
 MERCHANTIBILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE AUTHORS AND
 CONTRIBUTORS ACCEPT NO RESPONSIBILITY IN ANY CONCEIVABLE MANNER.


src/gnuwin32/dos_glob.[ch]

Modified from perl's ext/File/Glob/bsd_glob.[ch].

/*
 * Copyright (c) 1989, 1993
 *	The Regents of the University of California.  All rights reserved.
 *
 * This code is derived from software contributed to Berkeley by
 * Guido van Rossum.
 *
 * Redistribution and use in source and binary forms, with or without
 * modification, are permitted provided that the following conditions
 * are met:
 * 1. Redistributions of source code must retain the above copyright
 *    notice, this list of conditions and the following disclaimer.
 * 2. Redistributions in binary form must reproduce the above copyright
 *    notice, this list of conditions and the following disclaimer in the
 *    documentation and/or other materials provided with the distribution.
 * 3. Neither the name of the University nor the names of its contributors
 *    may be used to endorse or promote products derived from this software
 *    without specific prior written permission.
 *
 * THIS SOFTWARE IS PROVIDED BY THE REGENTS AND CONTRIBUTORS ``AS IS'' AND
 * ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
 * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
 * ARE DISCLAIMED.  IN NO EVENT SHALL THE REGENTS OR CONTRIBUTORS BE LIABLE
 * FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
 * DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS
 * OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
 * HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
 * LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
 * OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
 * SUCH DAMAGE.
 */

src/fixed/h/iconv.h

From GNU libiconv-1.11, distributed under LGPL>=2,
Copyright (C) 1999-2003, 2005-2006 Free Software Foundation, Inc.
========= end src/gnuwin32/COPYRIGHTS.win ===================================



On a Debian GNU/Linux system, the GPL licenses (version 2 and 3) are
included in the files 
	/usr/share/common-licenses/GPL-2 and
	/usr/share/common-licenses/GPL-3. 
The LGPL licenses are included in the files 
	/usr/share/common-licenses/LGPL-2,
	/usr/share/common-licenses/LGPL-2.1 and
	/usr/share/common-licenses/LGPL-3
The Artistic license is in 
	/usr/share/common-licenses/Artistic.