ivar binary package in Ubuntu Groovy amd64

 iVar is a computational package that contains functions broadly useful
 for viral amplicon-based sequencing. Additional tools for metagenomic
 sequencing are actively being incorporated into iVar. While each of
 these functions can be accomplished using existing tools, iVar contains
 an intersection of functionality from multiple tools that are required
 to call iSNVs and consensus sequences from viral sequencing data across
 multiple replicates. iVar provided the following functions:
 .
  1. trimming of primers and low-quality bases,
  2. consensus calling,
  3. variant calling - both iSNVs and insertions/deletions, and
  4. identifying mismatches to primer sequences and excluding the
     corresponding reads from alignment files.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2020-06-17 02:23:14 UTC Published Ubuntu Groovy amd64 release universe science Optional 1.2.2+dfsg-3
  • Published on 2020-06-17
  • Copied from ubuntu groovy-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Groovy amd64 proposed universe science Optional 1.2.2+dfsg-3
  • Removal requested on 2020-06-17.
  • Deleted on 2020-06-17 by Ubuntu Archive Robot

    moved to Release

  • Published on 2020-06-16
  2020-06-17 02:23:22 UTC Superseded Ubuntu Groovy amd64 release universe science Optional 1.2.2+dfsg-2
  • Removed from disk on 2020-06-18.
  • Removal requested on 2020-06-18.
  • Superseded on 2020-06-17 by amd64 build of ivar 1.2.2+dfsg-3 in ubuntu groovy PROPOSED
  • Published on 2020-05-27
  • Copied from ubuntu groovy-proposed amd64 in Primary Archive for Ubuntu
  2020-06-18 06:10:10 UTC Deleted Ubuntu Groovy amd64 proposed universe science Optional 1.2.2+dfsg-2
  • Removed from disk on 2020-06-18.
  • Removal requested on 2020-05-27.
  • Deleted on 2020-05-27 by Ubuntu Archive Robot

    moved to Release

  • Published on 2020-05-27

Source package