ncbi-blast+ 2.2.25-3ubuntu1 source package in Ubuntu
Changelog
ncbi-blast+ (2.2.25-3ubuntu1) oneiric; urgency=low * debian/rules: disable --as-needed build (LP: #803185) almost all private libs are underlinked, fixing them is not worth the effort -- Julian Taylor <email address hidden> Mon, 18 Jul 2011 16:02:34 +0200
Upload details
- Uploaded by:
- Julian Taylor
- Sponsored by:
- Kees Cook
- Uploaded to:
- Oneiric
- Original maintainer:
- Ubuntu Developers
- Architectures:
- any
- Section:
- science
- Urgency:
- Low Urgency
See full publishing history Publishing
Series | Published | Component | Section |
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Downloads
File | Size | SHA-256 Checksum |
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ncbi-blast+_2.2.25.orig.tar.gz | 11.4 MiB | b0c57e5ab1a69d74131a090182ea730cdbe23adeca241e466264789226b145a3 |
ncbi-blast+_2.2.25-3ubuntu1.debian.tar.gz | 9.8 KiB | 5b467011060737ce385ec62b8df56197566cab635f756e09de78849a3600c681 |
ncbi-blast+_2.2.25-3ubuntu1.dsc | 2.2 KiB | b38b781be0a57ad1702e94d63fe04225c7c6beb6040c9207380294cb10fa8c20 |
Available diffs
- diff from 2.2.25-3 to 2.2.25-3ubuntu1 (964 bytes)
Binary packages built by this source
- ncbi-blast+: next generation suite of BLAST sequence search tools
The Basic Local Alignment Search Tool (BLAST) is the most widely
used sequence similarity tool. There are versions of BLAST that
compare protein queries to protein databases, nucleotide queries
to nucleotide databases, as well as versions that translate nucleotide
queries or databases in all six frames and compare to protein databases
or queries.
PSI-BLAST produces a position-specific- scoring- matrix (PSSM) starting
with a protein query, and then uses that PSSM to perform further searches.
It is also possible to compare a protein or nucleotide query to a
database of PSSM’s.
The NCBI supports a BLAST web page at blast.ncbi.nlm.nih. gov as well as
a network service.
- ncbi-blast+-legacy: NCBI Blast legacy call script
This package adds some fake scripts to call NCBI+ programs
with the NCBI blast command line. It makes use of the
legacy_blast script in ncbi-blast+ package.
.
To use those scripts, /usr/share/ncbi-blast+ /bin must be added
to the PATH.