RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux seaborgium 2.6.24-32-xen #1 SMP Mon Dec 3 16:12:25 UTC 2012 x86_64 Buildd toolchain package versions: launchpad-buildd_123~0.IS.8.04 python-lpbuildd_123~0.IS.8.04 bzr-builder_0.7.2+bzr156-0ubuntu1~1.IS.8.04 bzr_2.4.0-0ubuntu2~11.IS.8.04 dpkg-dev_1.14.16.6ubuntu4.2. Syncing the system clock with the buildd NTP service... 22 Jul 21:11:22 ntpdate[3427]: step time server 10.211.37.1 offset -1239076.558573 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-6164876', '/home/buildd/filecache-default/575690328fa1961d2fcee6c342de2e8e84a88778'] Unpacking chroot for build PACKAGEBUILD-6164876 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-6164876'] Mounting chroot for build PACKAGEBUILD-6164876 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-6164876', 'deb http://ppa.launchpad.net/gt1/libmaus/ubuntu precise main', 'deb http://ppa.launchpad.net/gt1/staden-io-lib-current/ubuntu precise main', 'deb http://ftpmaster.internal/ubuntu precise main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu precise-security main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu precise-updates main restricted universe multiverse'] Overriding sources.list in build-PACKAGEBUILD-6164876 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-6164876', 'amd64'] Updating debian chroot for build PACKAGEBUILD-6164876 Ign http://ppa.launchpad.net precise InRelease Ign http://ppa.launchpad.net precise InRelease Ign http://ftpmaster.internal precise InRelease Ign http://ftpmaster.internal precise-security InRelease Ign http://ftpmaster.internal precise-updates InRelease Get:1 http://ftpmaster.internal precise Release.gpg [198 B] Get:2 http://ftpmaster.internal precise-security Release.gpg [198 B] Get:3 http://ftpmaster.internal precise-updates Release.gpg [198 B] Get:4 http://ppa.launchpad.net precise Release.gpg [316 B] Get:5 http://ftpmaster.internal precise Release [49.6 kB] Get:6 http://ppa.launchpad.net precise Release.gpg [316 B] Get:7 http://ppa.launchpad.net precise Release [11.9 kB] Get:8 http://ftpmaster.internal precise-security Release [49.6 kB] Ign http://ppa.launchpad.net precise Release Get:9 http://ftpmaster.internal precise-updates Release [49.6 kB] Get:10 http://ftpmaster.internal precise/main amd64 Packages [1273 kB] Get:11 http://ppa.launchpad.net precise Release [11.9 kB] Ign http://ppa.launchpad.net precise Release Get:12 http://ppa.launchpad.net precise/main amd64 Packages [911 B] Ign http://ppa.launchpad.net precise/main TranslationIndex Get:13 http://ftpmaster.internal precise/restricted amd64 Packages [8452 B] Get:14 http://ftpmaster.internal precise/universe amd64 Packages [4786 kB] Get:15 http://ppa.launchpad.net precise/main amd64 Packages [827 B] Ign http://ppa.launchpad.net precise/main TranslationIndex Ign http://ppa.launchpad.net precise/main Translation-en Ign http://ppa.launchpad.net precise/main Translation-en Get:16 http://ftpmaster.internal precise/multiverse amd64 Packages [119 kB] Get:17 http://ftpmaster.internal precise/main TranslationIndex [3706 B] Get:18 http://ftpmaster.internal precise/multiverse TranslationIndex [2676 B] Get:19 http://ftpmaster.internal precise/restricted TranslationIndex [2596 B] Get:20 http://ftpmaster.internal precise/universe TranslationIndex [2922 B] Get:21 http://ftpmaster.internal precise-security/main amd64 Packages [406 kB] Get:22 http://ftpmaster.internal precise-security/restricted amd64 Packages [4627 B] Get:23 http://ftpmaster.internal precise-security/universe amd64 Packages [93.8 kB] Get:24 http://ftpmaster.internal precise-security/multiverse amd64 Packages [2434 B] Get:25 http://ftpmaster.internal precise-security/main TranslationIndex [74 B] Get:26 http://ftpmaster.internal precise-security/multiverse TranslationIndex [72 B] Get:27 http://ftpmaster.internal precise-security/restricted TranslationIndex [72 B] Get:28 http://ftpmaster.internal precise-security/universe TranslationIndex [73 B] Get:29 http://ftpmaster.internal precise-updates/main amd64 Packages [814 kB] Get:30 http://ftpmaster.internal precise-updates/restricted amd64 Packages [13.7 kB] Get:31 http://ftpmaster.internal precise-updates/universe amd64 Packages [244 kB] Get:32 http://ftpmaster.internal precise-updates/multiverse amd64 Packages [15.3 kB] Get:33 http://ftpmaster.internal precise-updates/main TranslationIndex [3564 B] Get:34 http://ftpmaster.internal precise-updates/multiverse TranslationIndex [2605 B] Get:35 http://ftpmaster.internal precise-updates/restricted TranslationIndex [2461 B] Get:36 http://ftpmaster.internal precise-updates/universe TranslationIndex [2850 B] Get:37 http://ftpmaster.internal precise/main Translation-en [726 kB] Get:38 http://ftpmaster.internal precise/multiverse Translation-en [93.4 kB] Get:39 http://ftpmaster.internal precise/restricted Translation-en [2395 B] Get:40 http://ftpmaster.internal precise/universe Translation-en [3341 kB] Get:41 http://ftpmaster.internal precise-security/main Translation-en [186 kB] Get:42 http://ftpmaster.internal precise-security/multiverse Translation-en [1299 B] Get:43 http://ftpmaster.internal precise-security/restricted Translation-en [1253 B] Get:44 http://ftpmaster.internal precise-security/universe Translation-en [57.5 kB] Get:45 http://ftpmaster.internal precise-updates/main Translation-en [358 kB] Get:46 http://ftpmaster.internal precise-updates/multiverse Translation-en [9010 B] Get:47 http://ftpmaster.internal precise-updates/restricted Translation-en [3027 B] Get:48 http://ftpmaster.internal precise-updates/universe Translation-en [142 kB] Fetched 12.9 MB in 8s (1609 kB/s) Reading package lists... W: GPG error: http://ppa.launchpad.net precise Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 8B5BFAEB65778D86 W: GPG error: http://ppa.launchpad.net precise Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 8B5BFAEB65778D86 Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: apt apt-transport-https base-files bash binutils bsdutils build-essential busybox-initramfs ca-certificates coreutils dpkg dpkg-dev gnupg gpgv ifupdown initramfs-tools initramfs-tools-bin initscripts iproute libapt-pkg4.12 libasn1-8-heimdal libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcurl3-gnutls libdbus-1-3 libdpkg-perl libdrm-intel1 libdrm-nouveau1a libdrm-radeon1 libdrm2 libgcrypt11 libglib2.0-0 libgnutls26 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libk5crypto3 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 liblockfile-bin liblockfile1 libmount1 libnih-dbus1 libnih1 libpciaccess0 libplymouth2 libroken18-heimdal libsasl2-2 libsqlite3-0 libssl1.0.0 libtasn1-3 libudev0 libuuid1 libwind0-heimdal linux-libc-dev login lsb-base make mount mountall multiarch-support openssl passwd perl perl-base perl-modules plymouth procps python-minimal python2.7-minimal sysv-rc sysvinit-utils tzdata ubuntu-keyring udev upstart util-linux 85 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 43.3 MB of archives. After this operation, 147 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! base-files bash dpkg coreutils login mount perl perl-base perl-modules sysv-rc plymouth libplymouth2 initramfs-tools-bin initramfs-tools mountall initscripts upstart libc-dev-bin libc6-dev libc-bin libc6 sysvinit-utils libdbus-1-3 libdrm2 libpciaccess0 libdrm-intel1 libdrm-nouveau1a libdrm-radeon1 libglib2.0-0 libudev0 busybox-initramfs lsb-base tzdata util-linux procps udev libnih-dbus1 libnih1 passwd iproute ifupdown linux-libc-dev bsdutils libssl1.0.0 python2.7-minimal python-minimal libapt-pkg4.12 ubuntu-keyring gpgv gnupg apt libuuid1 libblkid1 libmount1 liblockfile-bin liblockfile1 libsqlite3-0 libroken18-heimdal libasn1-8-heimdal libgcrypt11 libtasn1-3 libgnutls26 libk5crypto3 libgssapi-krb5-2 libkrb5-3 libkrb5support0 libhcrypto4-heimdal libheimbase1-heimdal libwind0-heimdal libhx509-5-heimdal libkrb5-26-heimdal libheimntlm0-heimdal libgssapi3-heimdal libsasl2-2 libldap-2.4-2 openssl ca-certificates libcurl3-gnutls multiarch-support apt-transport-https binutils make dpkg-dev libdpkg-perl build-essential Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise-updates/main base-files amd64 6.5ubuntu6.7 [61.0 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise-updates/main bash amd64 4.2-2ubuntu2.1 [641 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise-security/main dpkg amd64 1.16.1.2ubuntu7.5 [1829 kB] Get:4 http://ftpmaster.internal/ubuntu/ precise-updates/main coreutils amd64 8.13-3ubuntu3.2 [2222 kB] Get:5 http://ftpmaster.internal/ubuntu/ precise-updates/main login amd64 1:4.1.4.2+svn3283-3ubuntu5.1 [291 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise-updates/main mount amd64 2.20.1-1ubuntu3.1 [166 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise-security/main perl amd64 5.14.2-6ubuntu2.4 [4411 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise-security/main perl-base amd64 5.14.2-6ubuntu2.4 [1513 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise-security/main perl-modules all 5.14.2-6ubuntu2.4 [3389 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise-updates/main sysv-rc all 2.88dsf-13.10ubuntu11.1 [44.6 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise-updates/main plymouth amd64 0.8.2-2ubuntu31.1 [123 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise-updates/main libplymouth2 amd64 0.8.2-2ubuntu31.1 [92.0 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise-security/main initramfs-tools-bin amd64 0.99ubuntu13.5 [9782 B] Get:14 http://ftpmaster.internal/ubuntu/ precise-security/main initramfs-tools all 0.99ubuntu13.5 [49.0 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise-updates/main mountall amd64 2.36.4 [67.8 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise-updates/main initscripts amd64 2.88dsf-13.10ubuntu11.1 [28.1 kB] Get:17 http://ftpmaster.internal/ubuntu/ precise-updates/main upstart amd64 1.5-0ubuntu7.2 [312 kB] Get:18 http://ftpmaster.internal/ubuntu/ precise-security/main libc-dev-bin amd64 2.15-0ubuntu10.5 [83.9 kB] Get:19 http://ftpmaster.internal/ubuntu/ precise-security/main libc6-dev amd64 2.15-0ubuntu10.5 [2941 kB] Get:20 http://ftpmaster.internal/ubuntu/ precise-security/main libc-bin amd64 2.15-0ubuntu10.5 [1182 kB] Get:21 http://ftpmaster.internal/ubuntu/ precise-security/main libc6 amd64 2.15-0ubuntu10.5 [4654 kB] Get:22 http://ftpmaster.internal/ubuntu/ precise-updates/main sysvinit-utils amd64 2.88dsf-13.10ubuntu11.1 [60.2 kB] Get:23 http://ftpmaster.internal/ubuntu/ precise-security/main libdbus-1-3 amd64 1.4.18-1ubuntu1.4 [145 kB] Get:24 http://ftpmaster.internal/ubuntu/ precise-updates/main libdrm2 amd64 2.4.52-1~precise1 [26.1 kB] Get:25 http://ftpmaster.internal/ubuntu/ precise-updates/main libpciaccess0 amd64 0.12.902-1ubuntu0.2 [20.8 kB] Get:26 http://ftpmaster.internal/ubuntu/ precise-updates/main libdrm-intel1 amd64 2.4.52-1~precise1 [65.8 kB] Get:27 http://ftpmaster.internal/ubuntu/ precise-updates/main libdrm-nouveau1a amd64 2.4.52-1~precise1 [14.0 kB] Get:28 http://ftpmaster.internal/ubuntu/ precise-updates/main libdrm-radeon1 amd64 2.4.52-1~precise1 [27.9 kB] Get:29 http://ftpmaster.internal/ubuntu/ precise-updates/main libglib2.0-0 amd64 2.32.4-0ubuntu1 [1200 kB] Get:30 http://ftpmaster.internal/ubuntu/ precise-updates/main libudev0 amd64 175-0ubuntu9.5 [28.4 kB] Get:31 http://ftpmaster.internal/ubuntu/ precise-updates/main busybox-initramfs amd64 1:1.18.5-1ubuntu4.1 [183 kB] Get:32 http://ftpmaster.internal/ubuntu/ precise-updates/main lsb-base all 4.0-0ubuntu20.3 [10.5 kB] Get:33 http://ftpmaster.internal/ubuntu/ precise-security/main tzdata all 2014e-0ubuntu0.12.04 [458 kB] Get:34 http://ftpmaster.internal/ubuntu/ precise-updates/main util-linux amd64 2.20.1-1ubuntu3.1 [596 kB] Get:35 http://ftpmaster.internal/ubuntu/ precise-updates/main procps amd64 1:3.2.8-11ubuntu6.3 [235 kB] Get:36 http://ftpmaster.internal/ubuntu/ precise-updates/main udev amd64 175-0ubuntu9.5 [314 kB] Get:37 http://ftpmaster.internal/ubuntu/ precise-updates/main libnih-dbus1 amd64 1.0.3-4ubuntu9.1 [16.0 kB] Get:38 http://ftpmaster.internal/ubuntu/ precise-updates/main libnih1 amd64 1.0.3-4ubuntu9.1 [54.8 kB] Get:39 http://ftpmaster.internal/ubuntu/ precise-updates/main passwd amd64 1:4.1.4.2+svn3283-3ubuntu5.1 [959 kB] Get:40 http://ftpmaster.internal/ubuntu/ precise-updates/main iproute amd64 20111117-1ubuntu2.3 [444 kB] Get:41 http://ftpmaster.internal/ubuntu/ precise-updates/main ifupdown amd64 0.7~beta2ubuntu11.1 [48.3 kB] Get:42 http://ftpmaster.internal/ubuntu/ precise-security/main linux-libc-dev amd64 3.2.0-65.99 [859 kB] Get:43 http://ftpmaster.internal/ubuntu/ precise-updates/main bsdutils amd64 1:2.20.1-1ubuntu3.1 [39.7 kB] Get:44 http://ftpmaster.internal/ubuntu/ precise-security/main libssl1.0.0 amd64 1.0.1-4ubuntu5.16 [1051 kB] Get:45 http://ftpmaster.internal/ubuntu/ precise-security/main python2.7-minimal amd64 2.7.3-0ubuntu3.5 [1743 kB] Get:46 http://ftpmaster.internal/ubuntu/ precise-updates/main python-minimal amd64 2.7.3-0ubuntu2.2 [29.7 kB] Get:47 http://ftpmaster.internal/ubuntu/ precise-security/main libapt-pkg4.12 amd64 0.8.16~exp12ubuntu10.17 [940 kB] Get:48 http://ftpmaster.internal/ubuntu/ precise-updates/main ubuntu-keyring all 2011.11.21.1 [16.7 kB] Get:49 http://ftpmaster.internal/ubuntu/ precise-security/main gpgv amd64 1.4.11-3ubuntu2.6 [185 kB] Get:50 http://ftpmaster.internal/ubuntu/ precise-security/main gnupg amd64 1.4.11-3ubuntu2.6 [808 kB] Get:51 http://ftpmaster.internal/ubuntu/ precise-security/main apt amd64 0.8.16~exp12ubuntu10.17 [1102 kB] Get:52 http://ftpmaster.internal/ubuntu/ precise-updates/main libuuid1 amd64 2.20.1-1ubuntu3.1 [12.8 kB] Get:53 http://ftpmaster.internal/ubuntu/ precise-updates/main libblkid1 amd64 2.20.1-1ubuntu3.1 [73.7 kB] Get:54 http://ftpmaster.internal/ubuntu/ precise-updates/main libmount1 amd64 2.20.1-1ubuntu3.1 [71.5 kB] Get:55 http://ftpmaster.internal/ubuntu/ precise-updates/main liblockfile-bin amd64 1.09-3ubuntu0.1 [12.3 kB] Get:56 http://ftpmaster.internal/ubuntu/ precise-updates/main liblockfile1 amd64 1.09-3ubuntu0.1 [9232 B] Get:57 http://ftpmaster.internal/ubuntu/ precise-updates/main libsqlite3-0 amd64 3.7.9-2ubuntu1.1 [349 kB] Get:58 http://ftpmaster.internal/ubuntu/ precise-updates/main libroken18-heimdal amd64 1.6~git20120311.dfsg.1-2ubuntu0.1 [46.0 kB] Get:59 http://ftpmaster.internal/ubuntu/ precise-updates/main libasn1-8-heimdal amd64 1.6~git20120311.dfsg.1-2ubuntu0.1 [220 kB] Get:60 http://ftpmaster.internal/ubuntu/ precise-security/main libgcrypt11 amd64 1.5.0-3ubuntu0.2 [280 kB] Get:61 http://ftpmaster.internal/ubuntu/ precise-security/main libtasn1-3 amd64 2.10-1ubuntu1.1 [43.3 kB] Get:62 http://ftpmaster.internal/ubuntu/ precise-security/main libgnutls26 amd64 2.12.14-5ubuntu3.8 [459 kB] Get:63 http://ftpmaster.internal/ubuntu/ precise-security/main libk5crypto3 amd64 1.10+dfsg~beta1-2ubuntu0.3 [80.1 kB] Get:64 http://ftpmaster.internal/ubuntu/ precise-security/main libgssapi-krb5-2 amd64 1.10+dfsg~beta1-2ubuntu0.3 [118 kB] Get:65 http://ftpmaster.internal/ubuntu/ precise-security/main libkrb5-3 amd64 1.10+dfsg~beta1-2ubuntu0.3 [355 kB] Get:66 http://ftpmaster.internal/ubuntu/ precise-security/main libkrb5support0 amd64 1.10+dfsg~beta1-2ubuntu0.3 [23.8 kB] Get:67 http://ftpmaster.internal/ubuntu/ precise-updates/main libhcrypto4-heimdal amd64 1.6~git20120311.dfsg.1-2ubuntu0.1 [103 kB] Get:68 http://ftpmaster.internal/ubuntu/ precise-updates/main libheimbase1-heimdal amd64 1.6~git20120311.dfsg.1-2ubuntu0.1 [33.1 kB] Get:69 http://ftpmaster.internal/ubuntu/ precise-updates/main libwind0-heimdal amd64 1.6~git20120311.dfsg.1-2ubuntu0.1 [77.8 kB] Get:70 http://ftpmaster.internal/ubuntu/ precise-updates/main libhx509-5-heimdal amd64 1.6~git20120311.dfsg.1-2ubuntu0.1 [125 kB] Get:71 http://ftpmaster.internal/ubuntu/ precise-updates/main libkrb5-26-heimdal amd64 1.6~git20120311.dfsg.1-2ubuntu0.1 [234 kB] Get:72 http://ftpmaster.internal/ubuntu/ precise-updates/main libheimntlm0-heimdal amd64 1.6~git20120311.dfsg.1-2ubuntu0.1 [16.0 kB] Get:73 http://ftpmaster.internal/ubuntu/ precise-updates/main libgssapi3-heimdal amd64 1.6~git20120311.dfsg.1-2ubuntu0.1 [108 kB] Get:74 http://ftpmaster.internal/ubuntu/ precise-updates/main libsasl2-2 amd64 2.1.25.dfsg1-3ubuntu0.1 [69.1 kB] Get:75 http://ftpmaster.internal/ubuntu/ precise-updates/main libldap-2.4-2 amd64 2.4.28-1.1ubuntu4.4 [185 kB] Get:76 http://ftpmaster.internal/ubuntu/ precise-security/main openssl amd64 1.0.1-4ubuntu5.16 [523 kB] Get:77 http://ftpmaster.internal/ubuntu/ precise-security/main ca-certificates all 20130906ubuntu0.12.04.1 [192 kB] Get:78 http://ftpmaster.internal/ubuntu/ precise-security/main libcurl3-gnutls amd64 7.22.0-3ubuntu4.8 [227 kB] Get:79 http://ftpmaster.internal/ubuntu/ precise-security/main multiarch-support amd64 2.15-0ubuntu10.5 [4480 B] Get:80 http://ftpmaster.internal/ubuntu/ precise-security/main apt-transport-https amd64 0.8.16~exp12ubuntu10.17 [16.3 kB] Get:81 http://ftpmaster.internal/ubuntu/ precise-security/main binutils amd64 2.22-6ubuntu1.1 [2638 kB] Get:82 http://ftpmaster.internal/ubuntu/ precise-updates/main make amd64 3.81-8.1ubuntu1.1 [119 kB] Get:83 http://ftpmaster.internal/ubuntu/ precise-security/main dpkg-dev all 1.16.1.2ubuntu7.5 [468 kB] Get:84 http://ftpmaster.internal/ubuntu/ precise-security/main libdpkg-perl all 1.16.1.2ubuntu7.5 [182 kB] Get:85 http://ftpmaster.internal/ubuntu/ precise-updates/main build-essential amd64 11.5ubuntu2.1 [5816 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 43.3 MB in 2s (16.6 MB/s) (Reading database ... 12243 files and directories currently installed.) Preparing to replace base-files 6.5ubuntu6 (using .../base-files_6.5ubuntu6.7_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (6.5ubuntu6.7) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12244 files and directories currently installed.) Preparing to replace bash 4.2-2ubuntu2 (using .../bash_4.2-2ubuntu2.1_amd64.deb) ... Unpacking replacement bash ... Setting up bash (4.2-2ubuntu2.1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode. (Reading database ... 12244 files and directories currently installed.) Preparing to replace dpkg 1.16.1.2ubuntu7 (using .../dpkg_1.16.1.2ubuntu7.5_amd64.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.16.1.2ubuntu7.5) ... (Reading database ... 12245 files and directories currently installed.) Preparing to replace coreutils 8.13-3ubuntu3 (using .../coreutils_8.13-3ubuntu3.2_amd64.deb) ... Unpacking replacement coreutils ... Setting up coreutils (8.13-3ubuntu3.2) ... (Reading database ... 12245 files and directories currently installed.) Preparing to replace login 1:4.1.4.2+svn3283-3ubuntu5 (using .../login_1%3a4.1.4.2+svn3283-3ubuntu5.1_amd64.deb) ... Unpacking replacement login ... Setting up login (1:4.1.4.2+svn3283-3ubuntu5.1) ... (Reading database ... 12245 files and directories currently installed.) Preparing to replace mount 2.20.1-1ubuntu3 (using .../mount_2.20.1-1ubuntu3.1_amd64.deb) ... Unpacking replacement mount ... Setting up mount (2.20.1-1ubuntu3.1) ... (Reading database ... 12245 files and directories currently installed.) Preparing to replace perl 5.14.2-6ubuntu2 (using .../perl_5.14.2-6ubuntu2.4_amd64.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.14.2-6ubuntu2 (using .../perl-base_5.14.2-6ubuntu2.4_amd64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.14.2-6ubuntu2.4) ... (Reading database ... 12245 files and directories currently installed.) Preparing to replace perl-modules 5.14.2-6ubuntu2 (using .../perl-modules_5.14.2-6ubuntu2.4_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace sysv-rc 2.88dsf-13.10ubuntu11 (using .../sysv-rc_2.88dsf-13.10ubuntu11.1_all.deb) ... Unpacking replacement sysv-rc ... Preparing to replace plymouth 0.8.2-2ubuntu30 (using .../plymouth_0.8.2-2ubuntu31.1_amd64.deb) ... Unpacking replacement plymouth ... Preparing to replace libplymouth2 0.8.2-2ubuntu30 (using .../libplymouth2_0.8.2-2ubuntu31.1_amd64.deb) ... Unpacking replacement libplymouth2 ... Preparing to replace initramfs-tools-bin 0.99ubuntu13 (using .../initramfs-tools-bin_0.99ubuntu13.5_amd64.deb) ... Unpacking replacement initramfs-tools-bin ... Preparing to replace initramfs-tools 0.99ubuntu13 (using .../initramfs-tools_0.99ubuntu13.5_all.deb) ... Unpacking replacement initramfs-tools ... Preparing to replace mountall 2.36 (using .../mountall_2.36.4_amd64.deb) ... Unpacking replacement mountall ... Preparing to replace initscripts 2.88dsf-13.10ubuntu11 (using .../initscripts_2.88dsf-13.10ubuntu11.1_amd64.deb) ... Unpacking replacement initscripts ... Preparing to replace upstart 1.5-0ubuntu5 (using .../upstart_1.5-0ubuntu7.2_amd64.deb) ... Unpacking replacement upstart ... Preparing to replace libc-dev-bin 2.15-0ubuntu10 (using .../libc-dev-bin_2.15-0ubuntu10.5_amd64.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace libc6-dev 2.15-0ubuntu10 (using .../libc6-dev_2.15-0ubuntu10.5_amd64.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-bin 2.15-0ubuntu10 (using .../libc-bin_2.15-0ubuntu10.5_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.15-0ubuntu10.5) ... (Reading database ... 12246 files and directories currently installed.) Preparing to replace libc6 2.15-0ubuntu10 (using .../libc6_2.15-0ubuntu10.5_amd64.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.15-0ubuntu10.5) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12246 files and directories currently installed.) Preparing to replace sysvinit-utils 2.88dsf-13.10ubuntu11 (using .../sysvinit-utils_2.88dsf-13.10ubuntu11.1_amd64.deb) ... Unpacking replacement sysvinit-utils ... Preparing to replace libdbus-1-3 1.4.18-1ubuntu1 (using .../libdbus-1-3_1.4.18-1ubuntu1.4_amd64.deb) ... Unpacking replacement libdbus-1-3 ... Preparing to replace libdrm2 2.4.32-1ubuntu1 (using .../libdrm2_2.4.52-1~precise1_amd64.deb) ... Unpacking replacement libdrm2 ... Preparing to replace libpciaccess0 0.12.902-1 (using .../libpciaccess0_0.12.902-1ubuntu0.2_amd64.deb) ... Unpacking replacement libpciaccess0 ... Preparing to replace libdrm-intel1 2.4.32-1ubuntu1 (using .../libdrm-intel1_2.4.52-1~precise1_amd64.deb) ... Unpacking replacement libdrm-intel1 ... Preparing to replace libdrm-nouveau1a 2.4.32-1ubuntu1 (using .../libdrm-nouveau1a_2.4.52-1~precise1_amd64.deb) ... Unpacking replacement libdrm-nouveau1a ... Preparing to replace libdrm-radeon1 2.4.32-1ubuntu1 (using .../libdrm-radeon1_2.4.52-1~precise1_amd64.deb) ... Unpacking replacement libdrm-radeon1 ... Preparing to replace libglib2.0-0 2.32.1-0ubuntu2 (using .../libglib2.0-0_2.32.4-0ubuntu1_amd64.deb) ... Unpacking replacement libglib2.0-0 ... Preparing to replace libudev0 175-0ubuntu9 (using .../libudev0_175-0ubuntu9.5_amd64.deb) ... Unpacking replacement libudev0 ... Preparing to replace busybox-initramfs 1:1.18.5-1ubuntu4 (using .../busybox-initramfs_1%3a1.18.5-1ubuntu4.1_amd64.deb) ... Unpacking replacement busybox-initramfs ... Preparing to replace lsb-base 4.0-0ubuntu20 (using .../lsb-base_4.0-0ubuntu20.3_all.deb) ... Unpacking replacement lsb-base ... Setting up lsb-base (4.0-0ubuntu20.3) ... (Reading database ... 12246 files and directories currently installed.) Preparing to replace tzdata 2012b-1 (using .../tzdata_2014e-0ubuntu0.12.04_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2014e-0ubuntu0.12.04) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Jul 8 13:02:15 UTC 2014. Universal Time is now: Tue Jul 8 13:02:15 UTC 2014. Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 12237 files and directories currently installed.) Preparing to replace util-linux 2.20.1-1ubuntu3 (using .../util-linux_2.20.1-1ubuntu3.1_amd64.deb) ... Unpacking replacement util-linux ... Setting up libdbus-1-3 (1.4.18-1ubuntu1.4) ... Setting up libudev0 (175-0ubuntu9.5) ... Setting up sysvinit-utils (2.88dsf-13.10ubuntu11.1) ... Setting up sysv-rc (2.88dsf-13.10ubuntu11.1) ... Setting up libdrm2 (2.4.52-1~precise1) ... Setting up libpciaccess0 (0.12.902-1ubuntu0.2) ... Setting up libdrm-intel1 (2.4.52-1~precise1) ... Setting up libdrm-nouveau1a (2.4.52-1~precise1) ... Setting up libdrm-radeon1 (2.4.52-1~precise1) ... Setting up libplymouth2 (0.8.2-2ubuntu31.1) ... Setting up initramfs-tools-bin (0.99ubuntu13.5) ... Setting up busybox-initramfs (1:1.18.5-1ubuntu4.1) ... Setting up upstart (1.5-0ubuntu7.2) ... Installing new version of config file /etc/logrotate.d/upstart ... Setting up util-linux (2.20.1-1ubuntu3.1) ... Setting up initramfs-tools (0.99ubuntu13.5) ... update-initramfs: deferring update (trigger activated) Setting up mountall (2.36.4) ... Setting up initscripts (2.88dsf-13.10ubuntu11.1) ... Setting up plymouth (0.8.2-2ubuntu31.1) ... update-initramfs: deferring update (trigger activated) Processing triggers for libc-bin ... ldconfig deferred processing now taking place Processing triggers for initramfs-tools ... (Reading database ... 12237 files and directories currently installed.) Preparing to replace procps 1:3.2.8-11ubuntu6 (using .../procps_1%3a3.2.8-11ubuntu6.3_amd64.deb) ... invoke-rc.d: policy-rc.d denied execution of stop. Unpacking replacement procps ... Preparing to replace udev 175-0ubuntu9 (using .../udev_175-0ubuntu9.5_amd64.deb) ... Adding 'diversion of /sbin/udevadm to /sbin/udevadm.upgrade by fake-udev' Unpacking replacement udev ... Preparing to replace libnih-dbus1 1.0.3-4ubuntu9 (using .../libnih-dbus1_1.0.3-4ubuntu9.1_amd64.deb) ... Unpacking replacement libnih-dbus1 ... Preparing to replace libnih1 1.0.3-4ubuntu9 (using .../libnih1_1.0.3-4ubuntu9.1_amd64.deb) ... Unpacking replacement libnih1 ... Preparing to replace passwd 1:4.1.4.2+svn3283-3ubuntu5 (using .../passwd_1%3a4.1.4.2+svn3283-3ubuntu5.1_amd64.deb) ... Unpacking replacement passwd ... Setting up passwd (1:4.1.4.2+svn3283-3ubuntu5.1) ... (Reading database ... 12247 files and directories currently installed.) Preparing to replace iproute 20111117-1ubuntu2 (using .../iproute_20111117-1ubuntu2.3_amd64.deb) ... Unpacking replacement iproute ... Preparing to replace ifupdown 0.7~beta2ubuntu8 (using .../ifupdown_0.7~beta2ubuntu11.1_amd64.deb) ... Unpacking replacement ifupdown ... Preparing to replace linux-libc-dev 3.2.0-23.36 (using .../linux-libc-dev_3.2.0-65.99_amd64.deb) ... Unpacking replacement linux-libc-dev ... Preparing to replace bsdutils 1:2.20.1-1ubuntu3 (using .../bsdutils_1%3a2.20.1-1ubuntu3.1_amd64.deb) ... Unpacking replacement bsdutils ... Setting up bsdutils (1:2.20.1-1ubuntu3.1) ... (Reading database ... 12251 files and directories currently installed.) Preparing to replace libssl1.0.0 1.0.1-4ubuntu3 (using .../libssl1.0.0_1.0.1-4ubuntu5.16_amd64.deb) ... Unpacking replacement libssl1.0.0 ... Setting up libssl1.0.0 (1.0.1-4ubuntu5.16) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12251 files and directories currently installed.) Preparing to replace python2.7-minimal 2.7.3-0ubuntu3 (using .../python2.7-minimal_2.7.3-0ubuntu3.5_amd64.deb) ... Unpacking replacement python2.7-minimal ... Setting up python2.7-minimal (2.7.3-0ubuntu3.5) ... (Reading database ... 12251 files and directories currently installed.) Preparing to replace python-minimal 2.7.3-0ubuntu2 (using .../python-minimal_2.7.3-0ubuntu2.2_amd64.deb) ... Unpacking replacement python-minimal ... Setting up python-minimal (2.7.3-0ubuntu2.2) ... (Reading database ... 12251 files and directories currently installed.) Preparing to replace libapt-pkg4.12 0.8.16~exp12ubuntu10 (using .../libapt-pkg4.12_0.8.16~exp12ubuntu10.17_amd64.deb) ... Unpacking replacement libapt-pkg4.12 ... Setting up libapt-pkg4.12 (0.8.16~exp12ubuntu10.17) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12251 files and directories currently installed.) Preparing to replace ubuntu-keyring 2011.11.21 (using .../ubuntu-keyring_2011.11.21.1_all.deb) ... Unpacking replacement ubuntu-keyring ... Setting up ubuntu-keyring (2011.11.21.1) ... gpg: key 437D05B5: "Ubuntu Archive Automatic Signing Key " not changed gpg: key FBB75451: "Ubuntu CD Image Automatic Signing Key " not changed gpg: key C0B21F32: public key "Ubuntu Archive Automatic Signing Key (2012) " imported gpg: key EFE21092: public key "Ubuntu CD Image Automatic Signing Key (2012) " imported gpg: Total number processed: 4 gpg: imported: 2 (RSA: 2) gpg: unchanged: 2 gpg: no ultimately trusted keys found (Reading database ... 12251 files and directories currently installed.) Preparing to replace gpgv 1.4.11-3ubuntu2 (using .../gpgv_1.4.11-3ubuntu2.6_amd64.deb) ... Unpacking replacement gpgv ... Setting up gpgv (1.4.11-3ubuntu2.6) ... (Reading database ... 12251 files and directories currently installed.) Preparing to replace gnupg 1.4.11-3ubuntu2 (using .../gnupg_1.4.11-3ubuntu2.6_amd64.deb) ... Unpacking replacement gnupg ... Setting up gnupg (1.4.11-3ubuntu2.6) ... (Reading database ... 12251 files and directories currently installed.) Preparing to replace apt 0.8.16~exp12ubuntu10 (using .../apt_0.8.16~exp12ubuntu10.17_amd64.deb) ... Unpacking replacement apt ... Setting up apt (0.8.16~exp12ubuntu10.17) ... Installing new version of config file /etc/apt/apt.conf.d/01autoremove ... gpg: key 437D05B5: "Ubuntu Archive Automatic Signing Key " not changed gpg: key FBB75451: "Ubuntu CD Image Automatic Signing Key " not changed gpg: key C0B21F32: "Ubuntu Archive Automatic Signing Key (2012) " not changed gpg: key EFE21092: "Ubuntu CD Image Automatic Signing Key (2012) " not changed gpg: Total number processed: 4 gpg: unchanged: 4 No packages found matching linux-image-[0-9]*. (Reading database ... 12252 files and directories currently installed.) Preparing to replace libuuid1 2.20.1-1ubuntu3 (using .../libuuid1_2.20.1-1ubuntu3.1_amd64.deb) ... Unpacking replacement libuuid1 ... Setting up libuuid1 (2.20.1-1ubuntu3.1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12252 files and directories currently installed.) Preparing to replace libblkid1 2.20.1-1ubuntu3 (using .../libblkid1_2.20.1-1ubuntu3.1_amd64.deb) ... Unpacking replacement libblkid1 ... Setting up libblkid1 (2.20.1-1ubuntu3.1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12252 files and directories currently installed.) Preparing to replace libmount1 2.20.1-1ubuntu3 (using .../libmount1_2.20.1-1ubuntu3.1_amd64.deb) ... Unpacking replacement libmount1 ... Setting up libmount1 (2.20.1-1ubuntu3.1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12252 files and directories currently installed.) Preparing to replace liblockfile-bin 1.09-3 (using .../liblockfile-bin_1.09-3ubuntu0.1_amd64.deb) ... Unpacking replacement liblockfile-bin ... Preparing to replace liblockfile1 1.09-3 (using .../liblockfile1_1.09-3ubuntu0.1_amd64.deb) ... Unpacking replacement liblockfile1 ... Preparing to replace libsqlite3-0 3.7.9-2ubuntu1 (using .../libsqlite3-0_3.7.9-2ubuntu1.1_amd64.deb) ... Unpacking replacement libsqlite3-0 ... Preparing to replace libroken18-heimdal 1.6~git20120311.dfsg.1-2 (using .../libroken18-heimdal_1.6~git20120311.dfsg.1-2ubuntu0.1_amd64.deb) ... Unpacking replacement libroken18-heimdal ... Preparing to replace libasn1-8-heimdal 1.6~git20120311.dfsg.1-2 (using .../libasn1-8-heimdal_1.6~git20120311.dfsg.1-2ubuntu0.1_amd64.deb) ... Unpacking replacement libasn1-8-heimdal ... Preparing to replace libgcrypt11 1.5.0-3 (using .../libgcrypt11_1.5.0-3ubuntu0.2_amd64.deb) ... Unpacking replacement libgcrypt11 ... Preparing to replace libtasn1-3 2.10-1ubuntu1 (using .../libtasn1-3_2.10-1ubuntu1.1_amd64.deb) ... Unpacking replacement libtasn1-3 ... Preparing to replace libgnutls26 2.12.14-5ubuntu3 (using .../libgnutls26_2.12.14-5ubuntu3.8_amd64.deb) ... Unpacking replacement libgnutls26 ... Preparing to replace libk5crypto3 1.10+dfsg~beta1-2 (using .../libk5crypto3_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Unpacking replacement libk5crypto3 ... Preparing to replace libgssapi-krb5-2 1.10+dfsg~beta1-2 (using .../libgssapi-krb5-2_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Unpacking replacement libgssapi-krb5-2 ... Preparing to replace libkrb5-3 1.10+dfsg~beta1-2 (using .../libkrb5-3_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Unpacking replacement libkrb5-3 ... Preparing to replace libkrb5support0 1.10+dfsg~beta1-2 (using .../libkrb5support0_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Unpacking replacement libkrb5support0 ... Preparing to replace libhcrypto4-heimdal 1.6~git20120311.dfsg.1-2 (using .../libhcrypto4-heimdal_1.6~git20120311.dfsg.1-2ubuntu0.1_amd64.deb) ... Unpacking replacement libhcrypto4-heimdal ... Preparing to replace libheimbase1-heimdal 1.6~git20120311.dfsg.1-2 (using .../libheimbase1-heimdal_1.6~git20120311.dfsg.1-2ubuntu0.1_amd64.deb) ... Unpacking replacement libheimbase1-heimdal ... Preparing to replace libwind0-heimdal 1.6~git20120311.dfsg.1-2 (using .../libwind0-heimdal_1.6~git20120311.dfsg.1-2ubuntu0.1_amd64.deb) ... Unpacking replacement libwind0-heimdal ... Preparing to replace libhx509-5-heimdal 1.6~git20120311.dfsg.1-2 (using .../libhx509-5-heimdal_1.6~git20120311.dfsg.1-2ubuntu0.1_amd64.deb) ... Unpacking replacement libhx509-5-heimdal ... Preparing to replace libkrb5-26-heimdal 1.6~git20120311.dfsg.1-2 (using .../libkrb5-26-heimdal_1.6~git20120311.dfsg.1-2ubuntu0.1_amd64.deb) ... Unpacking replacement libkrb5-26-heimdal ... Preparing to replace libheimntlm0-heimdal 1.6~git20120311.dfsg.1-2 (using .../libheimntlm0-heimdal_1.6~git20120311.dfsg.1-2ubuntu0.1_amd64.deb) ... Unpacking replacement libheimntlm0-heimdal ... Preparing to replace libgssapi3-heimdal 1.6~git20120311.dfsg.1-2 (using .../libgssapi3-heimdal_1.6~git20120311.dfsg.1-2ubuntu0.1_amd64.deb) ... Unpacking replacement libgssapi3-heimdal ... Preparing to replace libsasl2-2 2.1.25.dfsg1-3 (using .../libsasl2-2_2.1.25.dfsg1-3ubuntu0.1_amd64.deb) ... Unpacking replacement libsasl2-2 ... Preparing to replace libldap-2.4-2 2.4.28-1.1ubuntu4 (using .../libldap-2.4-2_2.4.28-1.1ubuntu4.4_amd64.deb) ... Unpacking replacement libldap-2.4-2 ... Preparing to replace openssl 1.0.1-4ubuntu3 (using .../openssl_1.0.1-4ubuntu5.16_amd64.deb) ... Unpacking replacement openssl ... Preparing to replace ca-certificates 20111211 (using .../ca-certificates_20130906ubuntu0.12.04.1_all.deb) ... Unpacking replacement ca-certificates ... Preparing to replace libcurl3-gnutls 7.22.0-3ubuntu4 (using .../libcurl3-gnutls_7.22.0-3ubuntu4.8_amd64.deb) ... Unpacking replacement libcurl3-gnutls ... Preparing to replace multiarch-support 2.15-0ubuntu10 (using .../multiarch-support_2.15-0ubuntu10.5_amd64.deb) ... Unpacking replacement multiarch-support ... Setting up multiarch-support (2.15-0ubuntu10.5) ... (Reading database ... 12262 files and directories currently installed.) Preparing to replace apt-transport-https 0.8.16~exp12ubuntu10 (using .../apt-transport-https_0.8.16~exp12ubuntu10.17_amd64.deb) ... Unpacking replacement apt-transport-https ... Preparing to replace binutils 2.22-6ubuntu1 (using .../binutils_2.22-6ubuntu1.1_amd64.deb) ... Unpacking replacement binutils ... Preparing to replace make 3.81-8.1ubuntu1 (using .../make_3.81-8.1ubuntu1.1_amd64.deb) ... Unpacking replacement make ... Preparing to replace dpkg-dev 1.16.1.2ubuntu7 (using .../dpkg-dev_1.16.1.2ubuntu7.5_all.deb) ... Unpacking replacement dpkg-dev ... Preparing to replace libdpkg-perl 1.16.1.2ubuntu7 (using .../libdpkg-perl_1.16.1.2ubuntu7.5_all.deb) ... Unpacking replacement libdpkg-perl ... Preparing to replace build-essential 11.5ubuntu2 (using .../build-essential_11.5ubuntu2.1_amd64.deb) ... Unpacking replacement build-essential ... Setting up libc-dev-bin (2.15-0ubuntu10.5) ... Setting up linux-libc-dev (3.2.0-65.99) ... Setting up libc6-dev (2.15-0ubuntu10.5) ... Setting up libglib2.0-0 (2.32.4-0ubuntu1) ... No schema files found: doing nothing. Setting up procps (1:3.2.8-11ubuntu6.3) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up udev (175-0ubuntu9.5) ... invoke-rc.d: policy-rc.d denied execution of restart. Removing 'diversion of /sbin/udevadm to /sbin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up libnih1 (1.0.3-4ubuntu9.1) ... Setting up libnih-dbus1 (1.0.3-4ubuntu9.1) ... Setting up iproute (20111117-1ubuntu2.3) ... Setting up ifupdown (0.7~beta2ubuntu11.1) ... Installing new version of config file /etc/init/network-interface.conf ... Setting up liblockfile-bin (1.09-3ubuntu0.1) ... Setting up liblockfile1 (1.09-3ubuntu0.1) ... Setting up libsqlite3-0 (3.7.9-2ubuntu1.1) ... Setting up libroken18-heimdal (1.6~git20120311.dfsg.1-2ubuntu0.1) ... Setting up libasn1-8-heimdal (1.6~git20120311.dfsg.1-2ubuntu0.1) ... Setting up libgcrypt11 (1.5.0-3ubuntu0.2) ... Setting up libtasn1-3 (2.10-1ubuntu1.1) ... Setting up libgnutls26 (2.12.14-5ubuntu3.8) ... Setting up libkrb5support0 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libk5crypto3 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libkrb5-3 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libgssapi-krb5-2 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libhcrypto4-heimdal (1.6~git20120311.dfsg.1-2ubuntu0.1) ... Setting up libheimbase1-heimdal (1.6~git20120311.dfsg.1-2ubuntu0.1) ... Setting up libwind0-heimdal (1.6~git20120311.dfsg.1-2ubuntu0.1) ... Setting up libhx509-5-heimdal (1.6~git20120311.dfsg.1-2ubuntu0.1) ... Setting up libkrb5-26-heimdal (1.6~git20120311.dfsg.1-2ubuntu0.1) ... Setting up libheimntlm0-heimdal (1.6~git20120311.dfsg.1-2ubuntu0.1) ... Setting up libgssapi3-heimdal (1.6~git20120311.dfsg.1-2ubuntu0.1) ... Setting up libsasl2-2 (2.1.25.dfsg1-3ubuntu0.1) ... Setting up libldap-2.4-2 (2.4.28-1.1ubuntu4.4) ... Setting up openssl (1.0.1-4ubuntu5.16) ... Setting up ca-certificates (20130906ubuntu0.12.04.1) ... Updating certificates in /etc/ssl/certs... 21 added, 9 removed; done. Running hooks in /etc/ca-certificates/update.d....done. Setting up libcurl3-gnutls (7.22.0-3ubuntu4.8) ... Setting up apt-transport-https (0.8.16~exp12ubuntu10.17) ... Setting up binutils (2.22-6ubuntu1.1) ... Setting up make (3.81-8.1ubuntu1.1) ... Setting up perl-modules (5.14.2-6ubuntu2.4) ... Setting up perl (5.14.2-6ubuntu2.4) ... Setting up libdpkg-perl (1.16.1.2ubuntu7.5) ... Setting up dpkg-dev (1.16.1.2ubuntu7.5) ... Setting up build-essential (11.5ubuntu2.1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-6164876', 'amd64', 'precise', '--nolog', '--batch', '--archive=ubuntu', '--dist=precise', '--purpose=PPA', '--architecture=amd64', '--comp=main', 'libmaus_0.0.140+1124~ubuntu12.04.1.dsc'] Initiating build PACKAGEBUILD-6164876 with 2 jobs across 2 processor cores. Kernel reported to sbuild: 2.6.24-32-xen #1 SMP Mon Dec 3 16:12:25 UTC 2012 x86_64 Automatic build of libmaus_0.0.140+1124~ubuntu12.04.1 on seaborgium by sbuild/amd64 1.170.5 Build started at 20140708-1304 ****************************************************************************** libmaus_0.0.140+1124~ubuntu12.04.1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 9), dh-autoreconf, dh-exec, autoconf (>= 2.61), automake (>= 1.10), libtool (>= 2.2.6), pkg-config (>= 0.22), zlib1g-dev (>= 1.2.3), libsnappy-dev (>= 1.0.3), seqan-dev (>= 1.2), staden-io-lib-current-dev (>= 1.13.0) Checking for already installed source dependencies... debhelper: missing dh-autoreconf: missing dh-exec: missing autoconf: missing automake: missing libtool: missing pkg-config: missing zlib1g-dev: missing libsnappy-dev: missing seqan-dev: missing staden-io-lib-current-dev: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper dh-autoreconf dh-exec autoconf automake libtool pkg-config zlib1g-dev libsnappy-dev seqan-dev staden-io-lib-current-dev Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autotools-dev bsdmainutils comerr-dev dh-apparmor file gettext gettext-base groff-base html2text intltool-debian krb5-multidev libcroco3 libcurl3 libcurl4-openssl-dev libgcrypt11-dev libgettextpo0 libgnutls-dev libgnutls-openssl27 libgnutlsxx27 libgpg-error-dev libgssrpc4 libidn11-dev libkadm5clnt-mit8 libkadm5srv-mit8 libkdb5-6 libkrb5-dev libldap2-dev libmagic1 libp11-kit-dev libpipeline1 libpopt0 librtmp-dev libsnappy1 libssl-dev libtasn1-3-dev libunistring0 libxml2 m4 man-db po-debconf staden-io-lib-current Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc wamerican wordlist whois vacation doc-base dh-make gettext-doc groff krb5-doc libcurl3-dbg libgcrypt11-doc gnutls-doc gnutls-bin krb5-user libtool-doc automaken gfortran fortran95-compiler gcj less www-browser libmail-box-perl Recommended packages: autopoint curl wget lynx-cur libssl-doc libltdl-dev xml-core libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autotools-dev bsdmainutils comerr-dev debhelper dh-apparmor dh-autoreconf dh-exec file gettext gettext-base groff-base html2text intltool-debian krb5-multidev libcroco3 libcurl3 libcurl4-openssl-dev libgcrypt11-dev libgettextpo0 libgnutls-dev libgnutls-openssl27 libgnutlsxx27 libgpg-error-dev libgssrpc4 libidn11-dev libkadm5clnt-mit8 libkadm5srv-mit8 libkdb5-6 libkrb5-dev libldap2-dev libmagic1 libp11-kit-dev libpipeline1 libpopt0 librtmp-dev libsnappy-dev libsnappy1 libssl-dev libtasn1-3-dev libtool libunistring0 libxml2 m4 man-db pkg-config po-debconf seqan-dev staden-io-lib-current staden-io-lib-current-dev zlib1g-dev 0 upgraded, 52 newly installed, 0 to remove and 0 not upgraded. Need to get 16.6 MB of archives. After this operation, 64.0 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libpopt0 libgssrpc4 libkadm5clnt-mit8 libkdb5-6 libkadm5srv-mit8 libpipeline1 libxml2 libcroco3 libcurl3 libunistring0 libgettextpo0 libgnutls-openssl27 libgnutlsxx27 seqan-dev libmagic1 file bsdmainutils gettext-base groff-base man-db m4 autoconf autotools-dev automake html2text gettext intltool-debian po-debconf dh-apparmor debhelper libtool dh-autoreconf comerr-dev krb5-multidev pkg-config libidn11-dev libkrb5-dev libldap2-dev libgpg-error-dev libgcrypt11-dev zlib1g-dev libtasn1-3-dev libp11-kit-dev libgnutls-dev librtmp-dev libssl-dev libcurl4-openssl-dev staden-io-lib-current staden-io-lib-current-dev dh-exec libsnappy1 libsnappy-dev Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise/main libpopt0 amd64 1.16-3ubuntu1 [28.7 kB] Get:2 http://ppa.launchpad.net/gt1/staden-io-lib-current/ubuntu/ precise/main staden-io-lib-current amd64 1.13.4+358~ubuntu12.04.1 [215 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise-security/main libgssrpc4 amd64 1.10+dfsg~beta1-2ubuntu0.3 [57.5 kB] Get:4 http://ftpmaster.internal/ubuntu/ precise-security/main libkadm5clnt-mit8 amd64 1.10+dfsg~beta1-2ubuntu0.3 [38.7 kB] Get:5 http://ppa.launchpad.net/gt1/staden-io-lib-current/ubuntu/ precise/main staden-io-lib-current-dev amd64 1.13.4+358~ubuntu12.04.1 [327 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise-security/main libkdb5-6 amd64 1.10+dfsg~beta1-2ubuntu0.3 [37.5 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise-security/main libkadm5srv-mit8 amd64 1.10+dfsg~beta1-2ubuntu0.3 [54.4 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise/main libpipeline1 amd64 1.2.1-1 [26.5 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise-security/main libxml2 amd64 2.7.8.dfsg-5.1ubuntu4.9 [673 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise-updates/main libcroco3 amd64 0.6.5-1ubuntu0.1 [99.8 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise-security/main libcurl3 amd64 7.22.0-3ubuntu4.8 [237 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise/main libunistring0 amd64 0.9.3-5 [427 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise/main libgettextpo0 amd64 0.18.1.1-5ubuntu3 [120 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise-security/main libgnutls-openssl27 amd64 2.12.14-5ubuntu3.8 [21.6 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise-security/main libgnutlsxx27 amd64 2.12.14-5ubuntu3.8 [22.6 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise/universe seqan-dev all 1.3-1ubuntu2 [2399 kB] Get:17 http://ftpmaster.internal/ubuntu/ precise-security/main libmagic1 amd64 5.09-2ubuntu0.3 [217 kB] Get:18 http://ftpmaster.internal/ubuntu/ precise-security/main file amd64 5.09-2ubuntu0.3 [19.7 kB] Get:19 http://ftpmaster.internal/ubuntu/ precise/main bsdmainutils amd64 8.2.3ubuntu1 [200 kB] Get:20 http://ftpmaster.internal/ubuntu/ precise/main gettext-base amd64 0.18.1.1-5ubuntu3 [80.0 kB] Get:21 http://ftpmaster.internal/ubuntu/ precise/main groff-base amd64 1.21-7 [1046 kB] Get:22 http://ftpmaster.internal/ubuntu/ precise-updates/main man-db amd64 2.6.1-2ubuntu1 [755 kB] Get:23 http://ftpmaster.internal/ubuntu/ precise/main m4 amd64 1.4.16-2ubuntu1 [200 kB] Get:24 http://ftpmaster.internal/ubuntu/ precise/main autoconf all 2.68-1ubuntu2 [560 kB] Get:25 http://ftpmaster.internal/ubuntu/ precise/main autotools-dev all 20120210.1ubuntu1 [42.4 kB] Get:26 http://ftpmaster.internal/ubuntu/ precise/main automake all 1:1.11.3-1ubuntu2 [571 kB] Get:27 http://ftpmaster.internal/ubuntu/ precise/main html2text amd64 1.3.2a-15 [104 kB] Get:28 http://ftpmaster.internal/ubuntu/ precise/main gettext amd64 0.18.1.1-5ubuntu3 [1188 kB] Get:29 http://ftpmaster.internal/ubuntu/ precise/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:30 http://ftpmaster.internal/ubuntu/ precise/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:31 http://ftpmaster.internal/ubuntu/ precise-updates/main dh-apparmor all 2.7.102-0ubuntu3.9 [8950 B] Get:32 http://ftpmaster.internal/ubuntu/ precise/main debhelper all 9.20120115ubuntu3 [616 kB] Get:33 http://ftpmaster.internal/ubuntu/ precise/main libtool amd64 2.4.2-1ubuntu1 [302 kB] Get:34 http://ftpmaster.internal/ubuntu/ precise/main dh-autoreconf all 5ubuntu1 [14.7 kB] Get:35 http://ftpmaster.internal/ubuntu/ precise/main comerr-dev amd64 2.1-1.42-1ubuntu2 [42.7 kB] Get:36 http://ftpmaster.internal/ubuntu/ precise-security/main krb5-multidev amd64 1.10+dfsg~beta1-2ubuntu0.3 [125 kB] Get:37 http://ftpmaster.internal/ubuntu/ precise/main pkg-config amd64 0.26-1ubuntu1 [40.9 kB] Get:38 http://ftpmaster.internal/ubuntu/ precise/main libidn11-dev amd64 1.23-2 [636 kB] Get:39 http://ftpmaster.internal/ubuntu/ precise-security/main libkrb5-dev amd64 1.10+dfsg~beta1-2ubuntu0.3 [11.0 kB] Get:40 http://ftpmaster.internal/ubuntu/ precise-updates/main libldap2-dev amd64 2.4.28-1.1ubuntu4.4 [492 kB] Get:41 http://ftpmaster.internal/ubuntu/ precise/main libgpg-error-dev amd64 1.10-2ubuntu1 [23.3 kB] Get:42 http://ftpmaster.internal/ubuntu/ precise-security/main libgcrypt11-dev amd64 1.5.0-3ubuntu0.2 [363 kB] Get:43 http://ftpmaster.internal/ubuntu/ precise/main zlib1g-dev amd64 1:1.2.3.4.dfsg-3ubuntu4 [165 kB] Get:44 http://ftpmaster.internal/ubuntu/ precise-security/main libtasn1-3-dev amd64 2.10-1ubuntu1.1 [357 kB] Get:45 http://ftpmaster.internal/ubuntu/ precise/main libp11-kit-dev amd64 0.12-2ubuntu1 [45.6 kB] Get:46 http://ftpmaster.internal/ubuntu/ precise-security/main libgnutls-dev amd64 2.12.14-5ubuntu3.8 [546 kB] Get:47 http://ftpmaster.internal/ubuntu/ precise/main librtmp-dev amd64 2.4~20110711.gitc28f1bab-1 [67.3 kB] Get:48 http://ftpmaster.internal/ubuntu/ precise-security/main libssl-dev amd64 1.0.1-4ubuntu5.16 [1575 kB] Get:49 http://ftpmaster.internal/ubuntu/ precise-security/main libcurl4-openssl-dev amd64 7.22.0-3ubuntu4.8 [1077 kB] Get:50 http://ftpmaster.internal/ubuntu/ precise/universe dh-exec amd64 0.2 [18.3 kB] Get:51 http://ftpmaster.internal/ubuntu/ precise/universe libsnappy1 amd64 1.0.4-1build1 [12.8 kB] Get:52 http://ftpmaster.internal/ubuntu/ precise/universe libsnappy-dev amd64 1.0.4-1build1 [20.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 16.6 MB in 1s (14.8 MB/s) Selecting previously unselected package libpopt0. (Reading database ... 12261 files and directories currently installed.) Unpacking libpopt0 (from .../libpopt0_1.16-3ubuntu1_amd64.deb) ... Selecting previously unselected package libgssrpc4. Unpacking libgssrpc4 (from .../libgssrpc4_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Selecting previously unselected package libkadm5clnt-mit8. Unpacking libkadm5clnt-mit8 (from .../libkadm5clnt-mit8_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Selecting previously unselected package libkdb5-6. Unpacking libkdb5-6 (from .../libkdb5-6_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Selecting previously unselected package libkadm5srv-mit8. Unpacking libkadm5srv-mit8 (from .../libkadm5srv-mit8_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Selecting previously unselected package libpipeline1. Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_amd64.deb) ... Selecting previously unselected package libxml2. Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-5.1ubuntu4.9_amd64.deb) ... 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Selecting previously unselected package libssl-dev. Unpacking libssl-dev (from .../libssl-dev_1.0.1-4ubuntu5.16_amd64.deb) ... Selecting previously unselected package libcurl4-openssl-dev. Unpacking libcurl4-openssl-dev (from .../libcurl4-openssl-dev_7.22.0-3ubuntu4.8_amd64.deb) ... Selecting previously unselected package staden-io-lib-current. Unpacking staden-io-lib-current (from .../staden-io-lib-current_1.13.4+358~ubuntu12.04.1_amd64.deb) ... Selecting previously unselected package staden-io-lib-current-dev. Unpacking staden-io-lib-current-dev (from .../staden-io-lib-current-dev_1.13.4+358~ubuntu12.04.1_amd64.deb) ... Selecting previously unselected package dh-exec. Unpacking dh-exec (from .../archives/dh-exec_0.2_amd64.deb) ... Selecting previously unselected package libsnappy1. Unpacking libsnappy1 (from .../libsnappy1_1.0.4-1build1_amd64.deb) ... Selecting previously unselected package libsnappy-dev. Unpacking libsnappy-dev (from .../libsnappy-dev_1.0.4-1build1_amd64.deb) ... Setting up libpopt0 (1.16-3ubuntu1) ... Setting up libgssrpc4 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libkadm5clnt-mit8 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libkdb5-6 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libkadm5srv-mit8 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libpipeline1 (1.2.1-1) ... Setting up libxml2 (2.7.8.dfsg-5.1ubuntu4.9) ... Setting up libcroco3 (0.6.5-1ubuntu0.1) ... Setting up libcurl3 (7.22.0-3ubuntu4.8) ... Setting up libunistring0 (0.9.3-5) ... Setting up libgettextpo0 (0.18.1.1-5ubuntu3) ... Setting up libgnutls-openssl27 (2.12.14-5ubuntu3.8) ... Setting up libgnutlsxx27 (2.12.14-5ubuntu3.8) ... Setting up seqan-dev (1.3-1ubuntu2) ... Setting up libmagic1 (5.09-2ubuntu0.3) ... Setting up file (5.09-2ubuntu0.3) ... Setting up bsdmainutils (8.2.3ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up gettext-base (0.18.1.1-5ubuntu3) ... Setting up groff-base (1.21-7) ... Setting up man-db (2.6.1-2ubuntu1) ... Building database of manual pages ... Setting up m4 (1.4.16-2ubuntu1) ... Setting up autoconf (2.68-1ubuntu2) ... Setting up autotools-dev (20120210.1ubuntu1) ... Setting up automake (1:1.11.3-1ubuntu2) ... update-alternatives: using /usr/bin/automake-1.11 to provide /usr/bin/automake (automake) in auto mode. Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-5ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up dh-apparmor (2.7.102-0ubuntu3.9) ... Setting up debhelper (9.20120115ubuntu3) ... Setting up libtool (2.4.2-1ubuntu1) ... Setting up dh-autoreconf (5ubuntu1) ... Setting up comerr-dev (2.1-1.42-1ubuntu2) ... Setting up krb5-multidev (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up pkg-config (0.26-1ubuntu1) ... Setting up libidn11-dev (1.23-2) ... Setting up libkrb5-dev (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libldap2-dev (2.4.28-1.1ubuntu4.4) ... Setting up libgpg-error-dev (1.10-2ubuntu1) ... Setting up libgcrypt11-dev (1.5.0-3ubuntu0.2) ... Setting up zlib1g-dev (1:1.2.3.4.dfsg-3ubuntu4) ... Setting up libtasn1-3-dev (2.10-1ubuntu1.1) ... Setting up libp11-kit-dev (0.12-2ubuntu1) ... Setting up libgnutls-dev (2.12.14-5ubuntu3.8) ... Setting up librtmp-dev (2.4~20110711.gitc28f1bab-1) ... Setting up libssl-dev (1.0.1-4ubuntu5.16) ... Setting up libcurl4-openssl-dev (7.22.0-3ubuntu4.8) ... Setting up staden-io-lib-current (1.13.4+358~ubuntu12.04.1) ... Setting up staden-io-lib-current-dev (1.13.4+358~ubuntu12.04.1) ... Setting up dh-exec (0.2) ... Setting up libsnappy1 (1.0.4-1build1) ... Setting up libsnappy-dev (1.0.4-1build1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.15-0ubuntu10.5 make_3.81-8.1ubuntu1.1 dpkg-dev_1.16.1.2ubuntu7.5 gcc-4.6_4.6.3-1ubuntu5 g++-4.6_4.6.3-1ubuntu5 binutils_2.22-6ubuntu1.1 libstdc++6-4.6-dev_4.6.3-1ubuntu5 libstdc++6_4.6.3-1ubuntu5 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::native dpkg-source: warning: extracting unsigned source package (libmaus_0.0.140+1124~ubuntu12.04.1.dsc) dpkg-source: info: extracting libmaus in libmaus-0.0.140+1124~ubuntu12.04.1 dpkg-source: info: unpacking libmaus_0.0.140+1124~ubuntu12.04.1.tar.gz dpkg-buildpackage: source package libmaus dpkg-buildpackage: source version 0.0.140+1124~ubuntu12.04.1 dpkg-source --before-build libmaus-0.0.140+1124~ubuntu12.04.1 dpkg-buildpackage: host architecture amd64 dpkg-source: info: using options from libmaus-0.0.140+1124~ubuntu12.04.1/debian/source/options: --single-debian-patch dpkg-source: warning: --single-debian-patch is not a valid option for Dpkg::Source::Package::V3::native /usr/bin/fakeroot debian/rules clean dh clean --with autoreconf --parallel dh_testdir -O--parallel dh_auto_clean -O--parallel dh_autoreconf_clean -O--parallel dh_clean -O--parallel rm -f debian/libmaus0.substvars rm -f debian/libmaus0.*.debhelper rm -rf debian/libmaus0/ rm -f debian/libmaus-dev.substvars rm -f debian/libmaus-dev.*.debhelper rm -rf debian/libmaus-dev/ rm -f debian/*.debhelper.log rm -f debian/files find . \( \( -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} \; \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \) rm -f *-stamp debian/rules build dh build --with autoreconf --parallel dh_testdir -O--parallel dh_autoreconf -O--parallel find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} \; > debian/autoreconf.before autoreconf -f -i libtoolize: putting auxiliary files in `.'. libtoolize: copying file `./config.guess' libtoolize: copying file `./config.sub' libtoolize: copying file `./install-sh' libtoolize: copying file `./ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIR, `m4'. libtoolize: copying file `m4/libtool.m4' libtoolize: copying file `m4/ltoptions.m4' libtoolize: copying file `m4/ltsugar.m4' libtoolize: copying file `m4/ltversion.m4' libtoolize: copying file `m4/lt~obsolete.m4' configure.ac:14: installing `./compile' configure.ac:7: installing `./missing' src/Makefile.am: installing `./depcomp' Makefile.am: installing `./INSTALL' find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} \; > debian/autoreconf.after debian/rules override_dh_auto_configure make[1]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' dh_auto_configure -- --with-snappy --with-seqan --with-io_lib --disable-kmlocal --disable-ssse3 --disable-sse4 ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --with-snappy --with-seqan --with-io_lib --disable-kmlocal --disable-ssse3 --disable-sse4 configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-kmlocal configure: Configuring for source in directory . checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 3458764513820540925 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking dependency style of gcc... none checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc and cc understand -c and -o together... yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking dependency style of g++... none checking size of unsigned long... 8 checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for zlib... yes checking for zlib... yes checking whether we can compile a zlib program... yes checking boost/regex.hpp usability... no checking boost/regex.hpp presence... no checking for boost/regex.hpp... no checking whether we can compile a program using the boost regex library... no checking snappy.h usability... yes checking snappy.h presence... yes checking for snappy.h... yes checking whether we can compile a program using snappy... yes checking for ANSI C header files... (cached) yes checking aio.h usability... yes checking aio.h presence... yes checking for aio.h... yes checking execinfo.h usability... yes checking execinfo.h presence... yes checking for execinfo.h... yes checking windows.h usability... no checking windows.h presence... no checking for windows.h... no checking for unistd.h... (cached) yes checking features.h usability... yes checking features.h presence... yes checking for features.h... yes checking for stdint.h... (cached) yes checking for dlfcn.h... (cached) yes checking for dlopen... no checking for dlerror... no checking for dlsym... no checking for dlclose... no checking for dlopen in -ldl... yes checking for dlerror in -ldl... yes checking for dlsym in -ldl... yes checking for dlclose in -ldl... yes checking whether we found the dlopen function anywhere... yes checking whether we found the dlerror function anywhere... yes checking whether we found the dlsym function anywhere... yes checking whether we found the dlclose function anywhere... yes checking whether we found all the functions required for dynamic modules somewhere... yes checking whether we need the dl library for any of the dl functions... yes checking for aio_suspend in -lrt... yes checking for backtrace... yes checking for setrlimit... yes checking whether the C++ compiler supports the -std=gnu++0x flag... yes checking cstdint usability... yes checking cstdint presence... no configure: WARNING: cstdint: accepted by the compiler, rejected by the preprocessor! configure: WARNING: cstdint: proceeding with the compiler's result checking for cstdint... yes checking whether the C++ compiler supports the -msse4 flag... yes checking whether the C++ compiler supports the -W flag... yes checking whether the C++ compiler supports the -Wall flag... yes checking whether the C++ compiler supports the -Wabi flag... yes checking whether the C++ compiler supports the -Wnon-virtual-dtor flag... yes checking for OpenMP flag of C++ compiler... -fopenmp checking whether std::unique_ptr exists... yes checking whether std::shared_ptr exists... yes checking boost/interprocess/smart_ptr/unique_ptr.hpp usability... no checking boost/interprocess/smart_ptr/unique_ptr.hpp presence... no checking for boost/interprocess/smart_ptr/unique_ptr.hpp... no checking boost/shared_ptr.hpp usability... no checking boost/shared_ptr.hpp presence... no checking for boost/shared_ptr.hpp... no checking whether std::unordered_map exists... yes checking whether std::unordered_set exists... yes checking boost/unordered_map.hpp usability... no checking boost/unordered_map.hpp presence... no checking for boost/unordered_map.hpp... no checking boost/unordered_set.hpp usability... no checking boost/unordered_set.hpp presence... no checking for boost/unordered_set.hpp... no checking whether std::move exists... yes checking whether boost::move exists... no checking for sys/types.h... (cached) yes checking sys/vfs.h usability... yes checking sys/vfs.h presence... yes checking for sys/vfs.h... yes checking for windows.h... (cached) no checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking regex.h usability... yes checking regex.h presence... yes checking for regex.h... yes checking seqan/align.h usability... yes checking seqan/align.h presence... yes checking for seqan/align.h... yes checking seqan/graph_msa.h usability... yes checking seqan/graph_msa.h presence... yes checking for seqan/graph_msa.h... yes checking seqan/score.h usability... yes checking seqan/score.h presence... yes checking for seqan/score.h... yes checking whether we can compile a SeqAN program... yes checking whether byte ordering is bigendian... no checking whether we can compile a program using posix regex... yes checking whether we can compile a program using statfs... yes checking whether the C++ compiler supports the -pthread flag... yes checking for pthread spin lock support... yes checking for sem_post... yes checking for sem_wait... yes checking for sem_init... yes checking for sem_destroy... yes checking for sem_timedwait... yes checking for pthread_setname_np... yes checking for pthread_set_name_np... no checking for pthread_getname_np... yes checking for pthread_get_name_np... no checking for pthread_setaffinity_np... yes checking for prctl... yes checking whether /usr/local/cuda/bin/nvcc exists... no checking whether the C++ compiler supports synchronous add operations... yes checking whether the C++ compiler supports synchronous lock operations... yes checking whether posix_memalign is present... yes checking whether getpagesize is present... yes checking io_lib/scram.h usability... yes checking io_lib/scram.h presence... yes checking for io_lib/scram.h... yes checking for scram_open... yes checking for scram_close... yes checking for scram_get_header... yes checking for scram_get_seq... yes checking for scram_set_option... yes checking whether we can compile a program using io_lib... yes checking whether MSG_CMSG_CLOEXEC is defined... yes checking lzma.h usability... no checking lzma.h presence... no checking for lzma.h... no checking libkern/OSAtomic.h usability... no checking libkern/OSAtomic.h presence... no checking for libkern/OSAtomic.h... no checking for unsigned __int128... yes configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating libmaus.pc config.status: creating libmauslsf.pc config.status: creating ubuntu.sh config.status: creating src/libmaus/LibMausConfig.hpp config.status: creating config.h config.status: executing libtool commands config.status: executing depfiles commands configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-kmlocal make[1]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' dh_auto_build -O--parallel make -j2 make[1]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' make all-recursive make[2]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' Making all in src make[3]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/src' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c -o libmaus/util/libmaus_la-md5.lo `test -f 'libmaus/util/md5.cpp' || echo './'`libmaus/util/md5.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c -o libmaus/util/libmaus_la-I386CacheLineSize.lo `test -f 'libmaus/util/I386CacheLineSize.cpp' || echo './'`libmaus/util/I386CacheLineSize.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c libmaus/util/md5.cpp -fPIC -DPIC -o libmaus/util/.libs/libmaus_la-md5.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c libmaus/util/I386CacheLineSize.cpp -fPIC -DPIC -o libmaus/util/.libs/libmaus_la-I386CacheLineSize.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c libmaus/util/md5.cpp -o libmaus/util/libmaus_la-md5.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c libmaus/util/I386CacheLineSize.cpp -o libmaus/util/libmaus_la-I386CacheLineSize.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c -o libmaus/util/libmaus_la-OutputFileNameTools.lo `test -f 'libmaus/util/OutputFileNameTools.cpp' || echo './'`libmaus/util/OutputFileNameTools.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c libmaus/util/OutputFileNameTools.cpp -fPIC -DPIC -o libmaus/util/.libs/libmaus_la-OutputFileNameTools.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c libmaus/util/OutputFileNameTools.cpp -o libmaus/util/libmaus_la-OutputFileNameTools.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c -o libmaus/fastx/libmaus_la-Phred.lo `test -f 'libmaus/fastx/Phred.cpp' || echo './'`libmaus/fastx/Phred.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c libmaus/fastx/Phred.cpp -fPIC -DPIC -o libmaus/fastx/.libs/libmaus_la-Phred.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -D_FORTIFY_SOURCE=2 -W -Wall -Wabi -Wnon-virtual-dtor -D_FORTIFY_SOURCE=2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -c libmaus/fastx/Phred.cpp -o libmaus/fastx/libmaus_la-Phred.o >/dev/null 2>&1 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-std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testsimplethreadpoolbamdecode test/testsimplethreadpoolbamdecode-testsimplethreadpoolbamdecode.o ./.libs/libmaus.so -lsnappy -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testgaparraybyte test/testgaparraybyte.o libmaus.la -lrt -lz libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testgaparraybyte test/testgaparraybyte.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testzlibconcat test/testzlibconcat-testzlibconcat.o libmaus.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testsimplecompressblock test/testsimplecompressblock-testsimplecompressblock.o libmaus.la -lsnappy -ldl -lrt -lz libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testzlibconcat test/testzlibconcat-testzlibconcat.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testsimplecompressblock test/testsimplecompressblock-testsimplecompressblock.o ./.libs/libmaus.so -lsnappy -ldl -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testrazdec test/testrazdec-testrazdec.o libmaus.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testfaindex test/testfaindex.o libmaus.la -lrt -lz libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testrazdec test/testrazdec-testrazdec.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testfaindex test/testfaindex.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testcurl test/testcurl-testcurl.o libmaus.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testfastablockrecode test/testfastablockrecode.o libmaus.la -lrt -lz libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testcurl test/testcurl-testcurl.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testfastablockrecode test/testfastablockrecode.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testhttp test/testhttp-testhttp.o libmaus.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testftp test/testftp-testftp.o libmaus.la -lrt -lz libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testhttp test/testhttp-testhttp.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testftp test/testftp-testftp.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testrlhist test/testrlhist.o libmaus.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testnumcpus test/testnumcpus.o libmaus.la -lrt -lz libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testrlhist test/testrlhist.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testnumcpus test/testnumcpus.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testdiag test/testdiag-testdiag.o libmaus.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testlinuxstreamingwrite test/testlinuxstreamingwrite-testlinuxstreamingwrite.o libmaus.la -lrt -lz libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testdiag test/testdiag-testdiag.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testlinuxstreamingwrite test/testlinuxstreamingwrite-testlinuxstreamingwrite.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testlowmembamheaderparser test/testlowmembamheaderparser-testlowmembamheaderparser.o libmaus.la -lrt -lz /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testgeneflatfile test/testgeneflatfile-testgeneflatfile.o libmaus.la -lrt -lz libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testlowmembamheaderparser test/testlowmembamheaderparser-testlowmembamheaderparser.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testgeneflatfile test/testgeneflatfile-testgeneflatfile.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -o testurlinputstream test/testurlinputstream-testurlinputstream.o libmaus.la -lrt -lz libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/testurlinputstream test/testurlinputstream-testurlinputstream.o ./.libs/libmaus.so -lrt -lz -fopenmp -pthread make[3]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/src' make[3]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' make[2]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' make[1]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' dh_auto_test -O--parallel make -j2 check make[1]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' Making check in src make[2]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/src' make[2]: Nothing to be done for `check'. make[2]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/src' make[2]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' make[2]: Nothing to be done for `check-am'. make[2]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' make[1]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' /usr/bin/fakeroot debian/rules binary-arch dh binary-arch --with autoreconf --parallel dh_testroot -a -O--parallel dh_prep -a -O--parallel rm -f debian/libmaus0.substvars rm -f debian/libmaus0.*.debhelper rm -rf debian/libmaus0/ rm -f debian/libmaus-dev.substvars rm -f debian/libmaus-dev.*.debhelper rm -rf debian/libmaus-dev/ dh_installdirs -a -O--parallel install -d debian/libmaus0 install -d debian/libmaus-dev dh_auto_install -a -O--parallel make -j2 install DESTDIR=/build/buildd/libmaus-0.0.140\+1124\~ubuntu12.04.1/debian/tmp make[1]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' Making install in src make[2]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/src' make[3]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/src' test -z "/usr/lib/x86_64-linux-gnu" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu" test -z "/usr/include/libmaus/" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/" /bin/bash ../libtool --mode=install /usr/bin/install -c libmaus.la libmauslsf.la libmaus_kmlocal_mod.la libmaus_consensus_mod.la libmaus_scram_mod.la '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu' /usr/bin/install -c -m 644 libmaus/LibMausConfig.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/' test -z "/usr/include/libmaus/aio" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/aio" libtool: install: /usr/bin/install -c .libs/libmaus.so.0.0.140 /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 /usr/bin/install -c -m 644 libmaus/aio/AsynchronousBufferReader.hpp libmaus/aio/AsynchronousWriter.hpp libmaus/aio/AsynchronousReader.hpp libmaus/aio/OutputBuffer8.hpp libmaus/aio/OutputBuffer84Bit.hpp libmaus/aio/TerminatedOutputBuffer84Bit.hpp libmaus/aio/OutputBuffer.hpp libmaus/aio/OutputFile8Array.hpp libmaus/aio/GenericInput.hpp libmaus/aio/MetaOutputFile8Array.hpp libmaus/aio/SynchronousOutputFile8Array.hpp libmaus/aio/MetaOutputBuffer8.hpp libmaus/aio/SynchronousOutputBuffer8.hpp libmaus/aio/BlockSynchronousOutputBuffer8.hpp libmaus/aio/GenericOutput.hpp libmaus/aio/MemInBuffer.hpp libmaus/aio/MemOutBuffer.hpp libmaus/aio/BufferedOutput.hpp libmaus/aio/FileFragment.hpp libmaus/aio/AsynchronousFastReaderBase.hpp libmaus/aio/SynchronousFastReaderBase.hpp libmaus/aio/LimitedGenericInput.hpp libmaus/aio/SynchronousGenericInput.hpp libmaus/aio/LimitedSynchronousGenericInput.hpp libmaus/aio/ReorderConcatGenericInput.hpp libmaus/aio/GetLength.hpp libmaus/aio/CompactDecoder4.hpp libmaus/aio/CompactEncoder4.hpp libmaus/aio/WriteCompactArray.hpp libmaus/aio/SynchronousGenericOutput.hpp libmaus/aio/SynchronousOutputBuffer8Posix.hpp libmaus/aio/SynchronousGenericOutputPosix.hpp libmaus/aio/PutOutputIterator.hpp libmaus/aio/CheckedInputStream.hpp libmaus/aio/CheckedOutputStream.hpp libmaus/aio/CircularBuffer.hpp libmaus/aio/CircularWrapper.hpp libmaus/aio/IStreamWrapper.hpp libmaus/aio/CheckedInputStreamAtOffset.hpp libmaus/aio/Buffer.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/aio' /usr/bin/install -c -m 644 libmaus/aio/SingleFileFragmentMerge.hpp libmaus/aio/CheckedInputOutputStream.hpp libmaus/aio/PosixFdInput.hpp libmaus/aio/PosixFdInputWrapper.hpp libmaus/aio/PosixFdInputStream.hpp libmaus/aio/PosixFdOutputStreamBuffer.hpp libmaus/aio/PosixFdOutputStream.hpp libmaus/aio/PosixFdInputStreamBuffer.hpp libmaus/aio/LinuxStreamingPosixFdOutputStreamBuffer.hpp libmaus/aio/LinuxStreamingPosixFdOutputStream.hpp libmaus/aio/IsKnownLocalFileSystem.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/aio' test -z "/usr/include/libmaus/arithmetic/" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/arithmetic/" /usr/bin/install -c -m 644 libmaus/arithmetic/ArithCoder.hpp libmaus/arithmetic/ArithEncoder.hpp libmaus/arithmetic/ArithDecoder.hpp libmaus/arithmetic/RangeCoder.hpp libmaus/arithmetic/RangeEncoder.hpp libmaus/arithmetic/RangeDecoder.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/arithmetic/' libtool: install: (cd /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libmaus.so.0.0.140 libmaus.so.0 || { rm -f libmaus.so.0 && ln -s libmaus.so.0.0.140 libmaus.so.0; }; }) libtool: install: (cd /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libmaus.so.0.0.140 libmaus.so || { rm -f libmaus.so && ln -s libmaus.so.0.0.140 libmaus.so; }; }) libtool: install: /usr/bin/install -c .libs/libmaus.lai /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmaus.la test -z "/usr/include/libmaus/autoarray/" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/autoarray/" libtool: install: warning: relinking `libmauslsf.la' libtool: install: (cd /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/src; /bin/bash /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/libtool --tag CXX --mode=relink g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -O3 -rdynamic -std=gnu++0x -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -version-info 0:140:0 -Wl,-Bsymbolic-functions -Wl,-z,relro -o libmauslsf.la -rpath /usr/lib/x86_64-linux-gnu libmaus/lsf/libmauslsf_la-LSFProcess.lo libmaus.la -lrt -lz -inst-prefix-dir /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp) /usr/bin/install -c -m 644 libmaus/autoarray/AutoArray.hpp libmaus/autoarray/AutoArray2d.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/autoarray/' test -z "/usr/include/libmaus/bambam/" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/bambam/" /usr/bin/install -c -m 644 libmaus/bambam/DecoderBase.hpp libmaus/bambam/Chromosome.hpp libmaus/bambam/BamAlignmentDecoderBase.hpp libmaus/bambam/BamFormatAuxiliary.hpp libmaus/bambam/EncoderBase.hpp libmaus/bambam/BamHeader.hpp libmaus/bambam/BamAlignment.hpp libmaus/bambam/BamDecoder.hpp libmaus/bambam/BamAlignmentComparator.hpp libmaus/bambam/MergeQueueElement.hpp libmaus/bambam/CollatingBamDecoder.hpp libmaus/bambam/CigarOperation.hpp libmaus/bambam/CigarStringParser.hpp libmaus/bambam/BamSeqEncodeTable.hpp libmaus/bambam/BamAlignmentEncoderBase.hpp libmaus/bambam/BamFlagBase.hpp libmaus/bambam/BamWriter.hpp libmaus/bambam/HeaderLine.hpp libmaus/bambam/ProgramHeaderLineSet.hpp libmaus/bambam/ReadEnds.hpp libmaus/bambam/ReadEndsHeapPairComparator.hpp libmaus/bambam/CompactReadEndsBase.hpp libmaus/bambam/CompactReadEndsComparator.hpp libmaus/bambam/SortedFragDecoder.hpp libmaus/bambam/ReadEndsContainer.hpp libmaus/bambam/DuplicationMetrics.hpp libmaus/bambam/OpticalComparator.hpp libmaus/bambam/BamAlignmentHeapComparator.hpp libmaus/bambam/BamAlignmentNameComparator.hpp libmaus/bambam/BamAlignmentPosComparator.hpp libmaus/bambam/BamEntryContainer.hpp libmaus/bambam/Scram.h libmaus/bambam/AlignmentValidity.hpp libmaus/bambam/ScramDecoder.hpp libmaus/bambam/ScramEncoder.hpp libmaus/bambam/SnappyAlignmentMergeInput.hpp libmaus/bambam/BamAlignmentPrinter.hpp libmaus/bambam/BamAlignmentSortingCircularHashEntryOverflow.hpp libmaus/bambam/CircularHashCollatingBamDecoder.hpp libmaus/bambam/BamToFastqOutputFileSet.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/bambam/' /usr/bin/install -c -m 644 libmaus/bambam/BamAlignmentDecoder.hpp libmaus/bambam/CollatingBamDecoderAlignmentInputCallback.hpp libmaus/bambam/ReadGroup.hpp libmaus/bambam/BamAuxFilterVector.hpp libmaus/bambam/BamDefaultAdapters.hpp libmaus/bambam/AdapterOffsetStrand.hpp libmaus/bambam/AdapterFilter.hpp libmaus/bambam/BamIndexBin.hpp libmaus/bambam/BamIndexLinear.hpp libmaus/bambam/BamIndexRef.hpp libmaus/bambam/BamIndex.hpp libmaus/bambam/BamRange.hpp libmaus/bambam/BamRangeParser.hpp libmaus/bambam/BamRangeDecoder.hpp libmaus/bambam/BamParallelRewrite.hpp libmaus/bambam/BamAlignmentExpungeCallback.hpp libmaus/bambam/StrCmpNum.hpp libmaus/bambam/BamCatHeader.hpp libmaus/bambam/BamCat.hpp libmaus/bambam/BamMergeCoordinate.hpp libmaus/bambam/BamMergeTemplate.hpp libmaus/bambam/BamMergeQueryName.hpp libmaus/bambam/BamIndexBinChunk.hpp libmaus/bambam/BamIndexLinearChunk.hpp libmaus/bambam/BamIndexGenerator.hpp libmaus/bambam/BgzfDeflateOutputCallbackBamIndex.hpp libmaus/bambam/BamAlignmentInputCallbackBam.hpp libmaus/bambam/BamAlignmentInputCallbackSnappy.hpp libmaus/bambam/BamHeaderUpdate.hpp libmaus/bambam/DupSetCallback.hpp libmaus/bambam/DupSetCallbackSet.hpp libmaus/bambam/DupSetCallbackStream.hpp libmaus/bambam/DupSetCallbackVector.hpp libmaus/bambam/BamAlignmentListNode.hpp libmaus/bambam/BamAlignmentPairListNode.hpp libmaus/bambam/ReadEndsListNode.hpp libmaus/bambam/BamAlignmentFreeList.hpp libmaus/bambam/BamAlignmentPairFreeList.hpp libmaus/bambam/ReadEndsFreeList.hpp libmaus/bambam/DupMarkBase.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/bambam/' /usr/bin/install -c -m 644 libmaus/bambam/BamAlignmentSnappyInput.hpp libmaus/bambam/BamAlignmentInputPositionUpdateCallback.hpp libmaus/bambam/BamAlignmentInputPositionCallbackNull.hpp libmaus/bambam/BamBlockWriterBase.hpp libmaus/bambam/BamBlockWriterBaseFactory.hpp libmaus/bambam/BamAlignmentDecoderInfo.hpp libmaus/bambam/BamAlignmentDecoderFactory.hpp libmaus/bambam/BamMultiAlignmentDecoderFactory.hpp libmaus/bambam/BamIndexMetaInfo.hpp libmaus/bambam/MdStringComputationContext.hpp libmaus/bambam/BamAlignmentFilter.hpp libmaus/bambam/BamAlignmentReadGroupFilter.hpp libmaus/bambam/MdNmRecalculation.hpp libmaus/bambam/CramRange.hpp libmaus/bambam/ChromosomeVectorMerge.hpp libmaus/bambam/BamHeaderLowMem.hpp libmaus/bambam/GeneFlatFile.hpp libmaus/bambam/GeneFlatFileEntry.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/bambam/' test -z "/usr/include/libmaus/bitbtree" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/bitbtree" /usr/bin/install -c -m 644 libmaus/bitbtree/bitbtree.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/bitbtree' test -z "/usr/include/libmaus/bitio" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/bitio" /usr/bin/install -c -m 644 libmaus/bitio/BitIO.hpp libmaus/bitio/BitIOOutput.hpp libmaus/bitio/CompactArray.hpp libmaus/bitio/CompactArrayBase.hpp libmaus/bitio/OutputBuffer.hpp libmaus/bitio/BitIOInput.hpp libmaus/bitio/getBits.hpp libmaus/bitio/ReverseTable.hpp libmaus/bitio/CompactQueue.hpp libmaus/bitio/putBits.hpp libmaus/bitio/SwapWordBitBlock.hpp libmaus/bitio/swapBitBlocksByReversal.hpp libmaus/bitio/putBit.hpp libmaus/bitio/getBit.hpp libmaus/bitio/readElias.hpp libmaus/bitio/BitWriter.hpp libmaus/bitio/CheckedBitWriter.hpp libmaus/bitio/FastWriteBitWriter.hpp libmaus/bitio/BitVector.hpp libmaus/bitio/SignedCompactArray.hpp libmaus/bitio/BufferIterator.hpp libmaus/bitio/BitVectorConcat.hpp libmaus/bitio/CompactSparseArray.hpp libmaus/bitio/CompactOffsetArray.hpp libmaus/bitio/CompactOffsetOneArray.hpp libmaus/bitio/ArrayDecode.hpp libmaus/bitio/BitStreamFileDecoder.hpp libmaus/bitio/Clz.hpp libmaus/bitio/CompactDecoderBuffer.hpp libmaus/bitio/Ctz.hpp libmaus/bitio/CompactArrayWriter.hpp libmaus/bitio/CompactArrayWriterFile.hpp libmaus/bitio/PacDecoderBuffer.hpp libmaus/bitio/MarkerFastWriteBitWriter.hpp libmaus/bitio/BitVectorInput.hpp libmaus/bitio/BitVectorOutput.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/bitio' test -z "/usr/include/libmaus/bp" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/bp" /usr/bin/install -c -m 644 libmaus/bp/BalancedParenthesesBase.hpp libmaus/bp/BalancedParentheses.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/bp' test -z "/usr/include/libmaus/btree" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/btree" /usr/bin/install -c -m 644 libmaus/btree/btree.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/btree' test -z "/usr/include/libmaus/clustering" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/clustering" libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/4.6/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.6/crtbeginS.o libmaus/lsf/.libs/libmauslsf_la-LSFProcess.o -L/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lmaus -lrt -lz -L/usr/lib/gcc/x86_64-linux-gnu/4.6 -L/usr/lib/gcc/x86_64-linux-gnu/4.6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.6/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.6/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/4.6/../../../x86_64-linux-gnu/crtn.o -O2 -O3 -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmauslsf.so.0 -o .libs/libmauslsf.so.0.0.140 /usr/bin/install -c -m 644 libmaus/clustering/HashCreation.hpp libmaus/clustering/HashCreationBase.hpp libmaus/clustering/ProduceEdgeRequest.hpp libmaus/clustering/KmerBase.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/clustering' test -z "/usr/include/libmaus/consensus/" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/consensus/" /usr/bin/install -c -m 644 libmaus/consensus/Consensus.hpp libmaus/consensus/ScoringMatrix.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/consensus/' test -z "/usr/include/libmaus/cumfreq" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/cumfreq" /usr/bin/install -c -m 644 libmaus/cumfreq/DynamicCumulativeFrequencies.hpp libmaus/cumfreq/SlowCumFreq.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/cumfreq' test -z "/usr/include/libmaus/deleter" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/deleter" /usr/bin/install -c -m 644 libmaus/deleter/Deleter.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/deleter' test -z "/usr/include/libmaus/eta" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/eta" /usr/bin/install -c -m 644 libmaus/eta/LinearETA.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/eta' test -z "/usr/include/libmaus/exception" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/exception" /usr/bin/install -c -m 644 libmaus/exception/LibMausException.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/exception' libtool: install: /usr/bin/install -c .libs/libmauslsf.so.0.0.140T /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmauslsf.so.0.0.140 libtool: install: (cd /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libmauslsf.so.0.0.140 libmauslsf.so.0 || { rm -f libmauslsf.so.0 && ln -s libmauslsf.so.0.0.140 libmauslsf.so.0; }; }) test -z "/usr/include/libmaus/fastx" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/fastx" libtool: install: (cd /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libmauslsf.so.0.0.140 libmauslsf.so || { rm -f libmauslsf.so && ln -s libmauslsf.so.0.0.140 libmauslsf.so; }; }) libtool: install: /usr/bin/install -c .libs/libmauslsf.lai /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmauslsf.la libtool: install: /usr/bin/install -c .libs/libmaus_kmlocal_mod.so /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmaus_kmlocal_mod.so /usr/bin/install -c -m 644 libmaus/fastx/CharTermTable.hpp libmaus/fastx/SpaceTable.hpp libmaus/fastx/CharBuffer.hpp libmaus/fastx/Pattern.hpp libmaus/fastx/acgtnMap.hpp libmaus/fastx/FastAReader.hpp libmaus/fastx/PatternBlock.hpp libmaus/fastx/FastIDBlock.hpp libmaus/fastx/FastQReader.hpp libmaus/fastx/FASTQEntry.hpp libmaus/fastx/isFastQ.hpp libmaus/fastx/MultiWordDNABitBuffer.hpp libmaus/fastx/SingleWordDNABitBuffer.hpp libmaus/fastx/FastInterval.hpp libmaus/fastx/FastAReaderSplit.hpp libmaus/fastx/FastQReaderSplit.hpp libmaus/fastx/ConcatWriter.hpp libmaus/fastx/FastFirstToLastReverseAdapter.hpp libmaus/fastx/FastServer.hpp libmaus/fastx/FastClient.hpp libmaus/fastx/CompactFastDecoderBase.hpp libmaus/fastx/CompactFastDecoder.hpp libmaus/fastx/CompactFastEncoder.hpp libmaus/fastx/CompactReadContainer.hpp libmaus/fastx/SocketFastAReader.hpp libmaus/fastx/SocketFastQReader.hpp libmaus/fastx/SubSamplingFastReader.hpp libmaus/fastx/SlashStrip.hpp libmaus/fastx/FirstWhiteSpaceSlashStrip.hpp libmaus/fastx/Phred.hpp libmaus/fastx/FastQElement.hpp libmaus/fastx/ComputeFastXIntervals.hpp libmaus/fastx/FqWeightQuantiser.hpp libmaus/fastx/CompactFastQHeader.hpp libmaus/fastx/CompactFastQContext.hpp libmaus/fastx/CompactFastQDecoderBase.hpp libmaus/fastx/CompactFastQContainerDictionary.hpp libmaus/fastx/CompactFastQContainer.hpp libmaus/fastx/CompactFastQContainerDictionaryCreator.hpp libmaus/fastx/CompactFastQBlockGenerator.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/fastx' libtool: install: /usr/bin/install -c .libs/libmaus_kmlocal_mod.lai /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmaus_kmlocal_mod.la libtool: install: /usr/bin/install -c .libs/libmaus_consensus_mod.so /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmaus_consensus_mod.so /usr/bin/install -c -m 644 libmaus/fastx/CompactFastQSingleBlockReader.hpp libmaus/fastx/CompactFastQMultiBlockReader.hpp libmaus/fastx/CompactFastTerminator.hpp libmaus/fastx/CompactFastReplace.hpp libmaus/fastx/QReorder.hpp libmaus/fastx/StreamFastReaderBase.hpp libmaus/fastx/StreamFastQReader.hpp libmaus/fastx/GzipStreamFastQReader.hpp libmaus/fastx/GzipFileFastQReader.hpp libmaus/fastx/FastQBgzfWriter.hpp libmaus/fastx/StreamFastAReader.hpp libmaus/fastx/FastALineParserLineInfo.hpp libmaus/fastx/FastADefinedBasesTable.hpp libmaus/fastx/FastAMapTable.hpp libmaus/fastx/FastAMatchTable.hpp libmaus/fastx/FastALineParser.hpp libmaus/fastx/FastAStreamWrapper.hpp libmaus/fastx/FastAStream.hpp libmaus/fastx/FastAStreamSet.hpp libmaus/fastx/BgzfFastAIndexEntry.hpp libmaus/fastx/BgzfFastAIndexEntryNameComparator.hpp libmaus/fastx/BgzfFastAIndexEntryIdComparator.hpp libmaus/fastx/FastABgzfIndexEntry.hpp libmaus/fastx/FastABgzfIndex.hpp libmaus/fastx/FastABgzfDecoder.hpp libmaus/fastx/FastABgzfDecoderBuffer.hpp libmaus/fastx/FastAIndexEntry.hpp libmaus/fastx/FastAIndex.hpp libmaus/fastx/FastAInfo.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/fastx' libtool: install: /usr/bin/install -c .libs/libmaus_consensus_mod.lai /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmaus_consensus_mod.la libtool: install: /usr/bin/install -c .libs/libmaus_scram_mod.so /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmaus_scram_mod.so libtool: install: /usr/bin/install -c .libs/libmaus_scram_mod.lai /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmaus_scram_mod.la libtool: install: /usr/bin/install -c .libs/libmaus.a /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmaus.a test -z "/usr/include/libmaus/fm" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/fm" /usr/bin/install -c -m 644 libmaus/fm/FM.hpp libmaus/fm/SampledSA.hpp libmaus/fm/SampledISA.hpp libmaus/fm/MausFmToBwaConversion.hpp libmaus/fm/BidirectionalIndexInterval.hpp libmaus/fm/BidirectionalIndexIntervalSymbol.hpp libmaus/fm/DictionaryInfo.hpp libmaus/fm/DictionaryInfoImpCompactHuffmanWaveletTree.hpp libmaus/fm/BidirectionalDnaIndexTemplate.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/fm' test -z "/usr/include/libmaus/gamma/" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/gamma/" /usr/bin/install -c -m 644 libmaus/gamma/GammaEncoder.hpp libmaus/gamma/GammaDecoder.hpp libmaus/gamma/GammaGapEncoder.hpp libmaus/gamma/GammaGapDecoder.hpp libmaus/gamma/GammaRLDecoder.hpp libmaus/gamma/GammaRLEncoder.hpp libmaus/gamma/SparseGammaGapEncoder.hpp libmaus/gamma/SparseGammaGapDecoder.hpp libmaus/gamma/SparseGammaGapMerge.hpp libmaus/gamma/SparseGammaGapFile.hpp libmaus/gamma/SparseGammaGapMultiFile.hpp libmaus/gamma/SparseGammaGapFileSet.hpp libmaus/gamma/SparseGammaGapFileLevelSet.hpp libmaus/gamma/SparseGammaGapFileIndexDecoderEntry.hpp libmaus/gamma/SparseGammaGapFileIndexDecoder.hpp libmaus/gamma/SparseGammaGapFileIndexMultiDecoder.hpp libmaus/gamma/SparseGammaGapConcatDecoder.hpp libmaus/gamma/SparseGammaGapMultiFileSet.hpp libmaus/gamma/SparseGammaGapMultiFileLevelSet.hpp libmaus/gamma/SparseGammaGapBlockEncoder.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/gamma/' libtool: install: chmod 644 /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmaus.a test -z "/usr/include/libmaus/graph" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/graph" libtool: install: ranlib /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmaus.a /usr/bin/install -c -m 644 libmaus/graph/TripleEdge.hpp libmaus/graph/TripleEdgeInput.hpp libmaus/graph/TripleEdgeOutput.hpp libmaus/graph/TripleEdgeOutputMerge.hpp libmaus/graph/TripleEdgeOperations.hpp libmaus/graph/TripleEdgeBuffer.hpp libmaus/graph/TripleEdgeBufferSet.hpp libmaus/graph/TripleEdgeOutputSet.hpp libmaus/graph/U64Buffer.hpp libmaus/graph/TripleIOTest.hpp libmaus/graph/EdgeList.hpp libmaus/graph/EdgeBuffer.hpp libmaus/graph/EdgeListLocalFlush.hpp libmaus/graph/EdgeListLocalLockedFlush.hpp libmaus/graph/EdgeListLocked.hpp libmaus/graph/EdgeBufferLocal.hpp libmaus/graph/EdgeBufferLocalLocked.hpp libmaus/graph/EdgeListLockedSet.hpp libmaus/graph/LocalEdgeSet.hpp libmaus/graph/TripleEdgeCompact.hpp libmaus/graph/FilteredGraphTypes.hpp libmaus/graph/GraphEdge.hpp libmaus/graph/GraphEdgeBuffer.hpp libmaus/graph/GraphEdgeBlockBuffer.hpp libmaus/graph/GraphEdgeHeapComparator.hpp libmaus/graph/GraphEdgeMerge.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/graph' test -z "/usr/include/libmaus/hashing" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/hashing" /usr/bin/install -c -m 644 libmaus/hashing/hash.hpp libmaus/hashing/CircularHash.hpp libmaus/hashing/ConstantStringHash.hpp libmaus/hashing/Crc32.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/hashing' test -z "/usr/include/libmaus/huffman" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/huffman" /usr/bin/install -c -m 644 libmaus/huffman/CompressTable.hpp libmaus/huffman/DecodeTable.hpp libmaus/huffman/EncodeTable.hpp libmaus/huffman/hufEncodeString.hpp libmaus/huffman/HuffmanBase.hpp libmaus/huffman/huffman.hpp libmaus/huffman/HuffmanSorting.hpp libmaus/huffman/HuffmanTreeInnerNode.hpp libmaus/huffman/HuffmanTreeLeafComparator.hpp libmaus/huffman/HuffmanTreeLeaf.hpp libmaus/huffman/HuffmanTreeNode.hpp libmaus/huffman/CanonicalEncoder.hpp libmaus/huffman/RLDecoder.hpp libmaus/huffman/RLEncoder.hpp libmaus/huffman/HuffmanEncoderFile.hpp libmaus/huffman/IndexLoader.hpp libmaus/huffman/GapDecoder.hpp libmaus/huffman/GapEncoder.hpp libmaus/huffman/FileStreamBaseType.hpp libmaus/huffman/BitInputBuffer.hpp libmaus/huffman/PairAddSecond.hpp libmaus/huffman/IndexEntry.hpp libmaus/huffman/IndexLoaderBase.hpp libmaus/huffman/RLDecoderIndexBase.hpp libmaus/huffman/GapDecoderIndexBase.hpp libmaus/huffman/IndexDecoderDataArray.hpp libmaus/huffman/HuffmanInputFile.hpp libmaus/huffman/KvInitResult.hpp libmaus/huffman/HuffmanTree.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/huffman' test -z "/usr/include/libmaus/lcp" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lcp" /usr/bin/install -c -m 644 libmaus/lcp/LCP.hpp libmaus/lcp/OracleLCP.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lcp' test -z "/usr/include/libmaus/lcs" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lcs" /usr/bin/install -c -m 644 libmaus/lcs/SuffixArrayLCS.hpp libmaus/lcs/LCSRef.hpp libmaus/lcs/LCSDynamic.hpp libmaus/lcs/SuffixPrefix.hpp libmaus/lcs/OverlapComputation.hpp libmaus/lcs/LCS.hpp libmaus/lcs/GenericEditDistance.hpp libmaus/lcs/EditDistanceResult.hpp libmaus/lcs/BaseConstants.hpp libmaus/lcs/PenaltyConstants.hpp libmaus/lcs/TraceContainer.hpp libmaus/lcs/GenericAlignmentPrint.hpp libmaus/lcs/SuffixPrefixResult.hpp libmaus/lcs/SuffixPrefixAlignmentPrint.hpp libmaus/lcs/OffsetElement.hpp libmaus/lcs/HashContainer.hpp libmaus/lcs/HashContainer2.hpp libmaus/lcs/DistNodeType.hpp libmaus/lcs/OverlapComputationBlockRequest.hpp libmaus/lcs/OverlapOrientation.hpp libmaus/lcs/OrientationWeightEncoding.hpp libmaus/lcs/CheckOverlapResult.hpp libmaus/lcs/CheckOverlapResultIdComparator.hpp libmaus/lcs/CheckOverlapResultIdHeapComparator.hpp libmaus/lcs/CheckOverlapResultInput.hpp libmaus/lcs/CheckOverlapResultInputPushBack.hpp libmaus/lcs/CheckOverlapResultMergeInput.hpp libmaus/lcs/CheckOverlapScoreComparatorGreater.hpp libmaus/lcs/CheckOverlapResultOperations.hpp libmaus/lcs/HammingOverlapDetection.hpp libmaus/lcs/AlignmentPrint.hpp libmaus/lcs/AlignmentTraceContainer.hpp libmaus/lcs/EditDistance.hpp libmaus/lcs/BandedEditDistance.hpp libmaus/lcs/MetaEditDistance.hpp libmaus/lcs/EditDistanceTraceContainer.hpp libmaus/lcs/EditDistancePriorityType.hpp libmaus/lcs/LocalBaseConstants.hpp libmaus/lcs/LocalPenaltyConstants.hpp libmaus/lcs/LocalAlignmentTraceContainer.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lcs' /usr/bin/install -c -m 644 libmaus/lcs/LocalEditDistanceTraceContainer.hpp libmaus/lcs/LocalAlignmentPrint.hpp libmaus/lcs/LocalEditDistance.hpp libmaus/lcs/LocalEditDistanceResult.hpp libmaus/lcs/MetaLocalEditDistance.hpp libmaus/lcs/BandedLocalEditDistance.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lcs' test -z "/usr/include/libmaus/lf" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lf" /usr/bin/install -c -m 644 libmaus/lf/LF.hpp libmaus/lf/HuffmanLF.hpp libmaus/lf/LFZero.hpp libmaus/lf/DArray.hpp libmaus/lf/ImpCompactHuffmanWaveletLF.hpp libmaus/lf/LFBase.hpp libmaus/lf/QuickLF.hpp libmaus/lf/MultiRankLF.hpp libmaus/lf/MultiRankCacheLF.hpp libmaus/lf/ImpCacheLineRankLF.hpp libmaus/lf/ImpCacheLineRankLFNonZero.hpp libmaus/lf/ImpHuffmanWaveletLF.hpp libmaus/lf/ImpWTLF.hpp libmaus/lf/RLIndexLF.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lf' test -z "/usr/include/libmaus/lru" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lru" /usr/bin/install -c -m 644 libmaus/lru/LRU.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lru' test -z "/usr/include/libmaus/lsf" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lsf" /usr/bin/install -c -m 644 libmaus/lsf/LSFProcess.hpp libmaus/lsf/ProcessSet.hpp libmaus/lsf/Process.hpp libmaus/lsf/LSFDispatcherBase.hpp libmaus/lsf/LSFStateBase.hpp libmaus/lsf/DispatchedLsfProcess.hpp libmaus/lsf/SimpleDispatchedLsfProcessSet.hpp libmaus/lsf/LSFTaskQueue.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lsf' test -z "/usr/include/libmaus/lz/" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lz/" /usr/bin/install -c -m 644 libmaus/lz/Inflate.hpp libmaus/lz/Deflate.hpp libmaus/lz/GzipHeader.hpp libmaus/lz/StreamWrapper.hpp libmaus/lz/GzipSingleStream.hpp libmaus/lz/GzipStream.hpp libmaus/lz/GzipStreamWrapper.hpp libmaus/lz/BufferedGzipStream.hpp libmaus/lz/StdOstreamSink.hpp libmaus/lz/IstreamSource.hpp libmaus/lz/SnappyCompress.hpp libmaus/lz/BgzfInflate.hpp libmaus/lz/BgzfInflateWrapper.hpp libmaus/lz/BgzfInflateStream.hpp libmaus/lz/BgzfDeflate.hpp libmaus/lz/BgzfInflateBase.hpp libmaus/lz/BgzfInflateBlock.hpp libmaus/lz/BgzfInflateParallel.hpp libmaus/lz/BgzfInflateParallelWrapper.hpp libmaus/lz/BgzfInflateParallelStream.hpp libmaus/lz/BgzfDeflateBase.hpp libmaus/lz/BgzfInflateBlockIdComparator.hpp libmaus/lz/BgzfInflateBlockIdInfo.hpp libmaus/lz/BgzfInflateParallelContext.hpp libmaus/lz/BgzfInflateParallelThread.hpp libmaus/lz/BgzfDeflateBlockIdInfo.hpp libmaus/lz/BgzfDeflateBlockIdComparator.hpp libmaus/lz/BgzfDeflateParallelContext.hpp libmaus/lz/BgzfDeflateParallelThread.hpp libmaus/lz/BgzfConstants.hpp libmaus/lz/BgzfDeflateHeaderFunctions.hpp libmaus/lz/BgzfDeflateInputBufferBase.hpp libmaus/lz/BgzfDeflateOutputBufferBase.hpp libmaus/lz/BgzfDeflateZStreamBase.hpp libmaus/lz/BgzfInflateHeaderBase.hpp libmaus/lz/BgzfInflateZStreamBase.hpp libmaus/lz/BgzfRecode.hpp libmaus/lz/BgzfThreadOpBase.hpp libmaus/lz/BgzfInflateDeflateParallel.hpp libmaus/lz/BgzfInflateDeflateParallelThread.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lz/' /usr/bin/install -c -m 644 libmaus/lz/BgzfDeflateParallel.hpp libmaus/lz/BgzfVirtualOffset.hpp libmaus/lz/BgzfInflateDeflateParallelWrapper.hpp libmaus/lz/BgzfInflateDeflateParallelInputStream.hpp libmaus/lz/BgzfDeflateOutputCallback.hpp libmaus/lz/BgzfDeflateOutputCallbackMD5.hpp libmaus/lz/BgzfParallelRecodeDeflateBase.hpp libmaus/lz/BgzfRecodeParallel.hpp libmaus/lz/BgzfDeflateZStreamBaseFlushInfo.hpp libmaus/lz/Lz4Base.hpp libmaus/lz/Lz4CompressStreamBuffer.hpp libmaus/lz/Lz4CompressWrapper.hpp libmaus/lz/Lz4Decoder.hpp libmaus/lz/Lz4Index.hpp libmaus/lz/Lz4Compress.hpp libmaus/lz/Lz4CompressStream.hpp libmaus/lz/Lz4DecoderBuffer.hpp libmaus/lz/GzipOutputStreamBuffer.hpp libmaus/lz/GzipOutputStream.hpp libmaus/lz/BgzfInflateInfo.hpp libmaus/lz/BgzfStreamWrapper.hpp libmaus/lz/CompressorObject.hpp libmaus/lz/CompressorObjectFactory.hpp libmaus/lz/SimpleCompressedOutputStream.hpp libmaus/lz/SnappyCompressorObject.hpp libmaus/lz/SnappyCompressorObjectFactory.hpp libmaus/lz/DecompressorObject.hpp libmaus/lz/DecompressorObjectFactory.hpp libmaus/lz/SnappyDecompressorObject.hpp libmaus/lz/SnappyDecompressorObjectFactory.hpp libmaus/lz/SimpleCompressedInputStream.hpp libmaus/lz/SimpleCompressedConcatInputStreamFragment.hpp libmaus/lz/SimpleCompressedConcatInputStream.hpp libmaus/lz/SnappyInputStreamArrayFile.hpp libmaus/lz/SnappyInputStreamArray.hpp libmaus/lz/SnappyStringInputStream.hpp libmaus/lz/SnappyOffsetFileInputStream.hpp libmaus/lz/SnappyFileInputStream.hpp libmaus/lz/SnappyInputStream.hpp libmaus/lz/SnappyFileOutputStream.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lz/' /usr/bin/install -c -m 644 libmaus/lz/SnappyOutputStream.hpp libmaus/lz/SimpleCompressedStreamInterval.hpp libmaus/lz/ZlibCompressorObjectFactory.hpp libmaus/lz/ZlibDecompressorObjectFactory.hpp libmaus/lz/ZlibCompressorObject.hpp libmaus/lz/ZlibDecompressorObject.hpp libmaus/lz/SimpleCompressedStreamNamedInterval.hpp libmaus/lz/SimpleCompressedInputBlock.hpp libmaus/lz/SimpleCompressedInputBlockConcat.hpp libmaus/lz/SimpleCompressedInputBlockConcatBlock.hpp libmaus/lz/RAZFConstants.hpp libmaus/lz/RAZFDecoderBuffer.hpp libmaus/lz/RAZFDecoder.hpp libmaus/lz/RAZFIndex.hpp libmaus/lz/IGzipDeflate.hpp libmaus/lz/IsGzip.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/lz/' test -z "/usr/include/libmaus/math" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/math" /usr/bin/install -c -m 644 libmaus/math/isqrt.hpp libmaus/math/bitsPerNum.hpp libmaus/math/MetaLog.hpp libmaus/math/lowbits.hpp libmaus/math/numbits.hpp libmaus/math/gcd.hpp libmaus/math/binom.hpp libmaus/math/primes16.hpp libmaus/math/ilog.hpp libmaus/math/DoubleCode.hpp libmaus/math/iabs.hpp libmaus/math/IPower.hpp libmaus/math/Log.hpp libmaus/math/ipow.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/math' test -z "/usr/include/libmaus/network" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/network" /usr/bin/install -c -m 644 libmaus/network/Socket.hpp libmaus/network/GetHostName.hpp libmaus/network/LogSocket.hpp libmaus/network/SocketFastReaderBase.hpp libmaus/network/Interface.hpp libmaus/network/GetDottedAddress.hpp libmaus/network/UDPSocket.hpp libmaus/network/GenericServer.hpp libmaus/network/SocketOutputBuffer8.hpp libmaus/network/SocketOutputBuffer8Set.hpp libmaus/network/sendReceiveFd.h libmaus/network/SocketPair.hpp libmaus/network/FileDescriptorPasser.hpp libmaus/network/LogReceiverTestProcess.hpp libmaus/network/LogReceiver.hpp libmaus/network/LogReceiverDispatcherBase.hpp libmaus/network/CurlInit.hpp libmaus/network/OpenSSLInit.hpp libmaus/network/SocketInputStreamBuffer.hpp libmaus/network/SocketInputStream.hpp libmaus/network/HttpAbsoluteUrl.hpp libmaus/network/SocketInputOutputInterface.hpp libmaus/network/OpenSSLSocket.hpp libmaus/network/FtpUrl.hpp libmaus/network/HttpBody.hpp libmaus/network/HttpHeader.hpp libmaus/network/FtpSocket.hpp libmaus/network/UrlBase.hpp libmaus/network/HttpHeaderWrapper.hpp libmaus/network/HttpBodyWrapper.hpp libmaus/network/FtpSocketWrapper.hpp libmaus/network/HttpSocketInputStreamBuffer.hpp libmaus/network/HttpSocketInputStream.hpp libmaus/network/FtpSocketInputStreamBuffer.hpp libmaus/network/FtpSocketInputStream.hpp libmaus/network/FileUrl.hpp libmaus/network/UrlInputStreamBufferWrapper.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/network' test -z "/usr/include/libmaus/parallel" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/parallel" /usr/bin/install -c -m 644 libmaus/parallel/OMPLock.hpp libmaus/parallel/PosixMutex.hpp libmaus/parallel/PosixSpinLock.hpp libmaus/parallel/PosixSemaphore.hpp libmaus/parallel/SynchronousQueue.hpp libmaus/parallel/TerminatableSynchronousQueue.hpp libmaus/parallel/PosixMutexArray.hpp libmaus/parallel/PosixThread.hpp libmaus/parallel/Pipe.hpp libmaus/parallel/SynchronousHeap.hpp libmaus/parallel/TerminatableSynchronousHeap.hpp libmaus/parallel/SynchronousReorderSet.hpp libmaus/parallel/TerminatableSynchronousReorderSet.hpp libmaus/parallel/SynchronousCounter.hpp libmaus/parallel/PosixProcess.hpp libmaus/parallel/OMPNumThreadsScope.hpp libmaus/parallel/LockedBool.hpp libmaus/parallel/ThreadWorkPackage.hpp libmaus/parallel/ThreadWorkPackageComparator.hpp libmaus/parallel/ThreadPoolInterfaceEnqueTermInterface.hpp libmaus/parallel/ThreadWorkPackageDispatcher.hpp libmaus/parallel/ThreadPoolInterface.hpp libmaus/parallel/ThreadPoolThread.hpp libmaus/parallel/ThreadPool.hpp libmaus/parallel/SimpleThreadPool.hpp libmaus/parallel/SimpleThreadPoolInterfaceEnqueTermInterface.hpp libmaus/parallel/SimpleThreadPoolInterface.hpp libmaus/parallel/SimpleThreadPoolThread.hpp libmaus/parallel/SimpleThreadPoolWorkPackageFreeList.hpp libmaus/parallel/SimpleThreadWorkPackageComparator.hpp libmaus/parallel/SimpleThreadWorkPackageDispatcher.hpp libmaus/parallel/SimpleThreadWorkPackage.hpp libmaus/parallel/LockedQueue.hpp libmaus/parallel/NumCpus.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/parallel' test -z "/usr/include/libmaus/quantisation/" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/quantisation/" /usr/bin/install -c -m 644 libmaus/quantisation/Quantiser.hpp libmaus/quantisation/ClusterComputation.hpp libmaus/quantisation/KmeansDataType.hpp libmaus/quantisation/KMLocalInterface.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/quantisation/' test -z "/usr/include/libmaus/random" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/random" /usr/bin/install -c -m 644 libmaus/random/Random.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/random' test -z "/usr/include/libmaus/rank" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/rank" /usr/bin/install -c -m 644 libmaus/rank/ChooseCache.hpp libmaus/rank/CodeBase.hpp libmaus/rank/DecodeCache.hpp libmaus/rank/ERank222BAppend.hpp libmaus/rank/ERank222B.hpp libmaus/rank/ERank222BP.hpp libmaus/rank/ERank222.hpp libmaus/rank/ERank22B.hpp libmaus/rank/ERank22.hpp libmaus/rank/ERank2.hpp libmaus/rank/ERank3C.hpp libmaus/rank/ERank3.hpp libmaus/rank/ERankBase.hpp libmaus/rank/ERank.hpp libmaus/rank/log2table.hpp libmaus/rank/popcnt.hpp libmaus/rank/RankTable.hpp libmaus/rank/Proc01.hpp libmaus/rank/EncodeCache.hpp libmaus/rank/CacheLineRank.hpp libmaus/rank/ImpCacheLineRank.hpp libmaus/rank/ERank222BBase.hpp libmaus/rank/ERank222BAppendDynamic.hpp libmaus/rank/RunLengthBitVectorBase.hpp libmaus/rank/RunLengthBitVector.hpp libmaus/rank/RunLengthBitVectorGenerator.hpp libmaus/rank/RunLengthBitVectorStream.hpp libmaus/rank/RunLengthBitVectorGeneratorBase.hpp libmaus/rank/RunLengthBitVectorGeneratorGammaBase.hpp libmaus/rank/FastRank.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/rank' test -z "/usr/include/libmaus/regex/" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/regex/" /usr/bin/install -c -m 644 libmaus/regex/PosixRegex.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/regex/' test -z "/usr/include/libmaus/rl" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/rl" /usr/bin/install -c -m 644 libmaus/rl/RLIndex.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/rl' test -z "/usr/include/libmaus/rmq" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/rmq" /usr/bin/install -c -m 644 libmaus/rmq/FischerSystematicSuccinctRMQ.hpp libmaus/rmq/QuickDynamicRMQ.hpp libmaus/rmq/CartesianTree.hpp libmaus/rmq/RMMTree.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/rmq' test -z "/usr/include/libmaus/select" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/select" /usr/bin/install -c -m 644 libmaus/select/ESelect222B.hpp libmaus/select/ESelectBase.hpp libmaus/select/ESelectSimple.hpp libmaus/select/ImpCacheLineSelectSupport.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/select' test -z "/usr/include/libmaus/serialize/" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/serialize/" /usr/bin/install -c -m 644 libmaus/serialize/Serialize.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/serialize/' libtool: install: /usr/bin/install -c .libs/libmauslsf.a /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmauslsf.a libtool: install: chmod 644 /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmauslsf.a libtool: install: ranlib /build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/libmauslsf.a libtool: install: warning: remember to run `libtool --finish /usr/lib/x86_64-linux-gnu' test -z "/usr/include/libmaus/sorting" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/sorting" test -z "/usr/include/libmaus/suffixsort" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/suffixsort" /usr/bin/install -c -m 644 libmaus/sorting/sorting.hpp libmaus/sorting/ParallelRadixSort.hpp libmaus/sorting/SerialRadixSort64.hpp libmaus/sorting/PairFileSorting.hpp libmaus/sorting/InPlaceParallelSort.hpp libmaus/sorting/MergingReadBack.hpp libmaus/sorting/SortingBufferedOutputFile.hpp libmaus/sorting/MergeStepBinSearchResult.hpp libmaus/sorting/ParallelStableSort.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/sorting' /usr/bin/install -c -m 644 libmaus/suffixsort/SkewSuffixSort.hpp libmaus/suffixsort/divsufsort.hpp libmaus/suffixsort/SAIS_Mori.hpp libmaus/suffixsort/SuccinctFactorList.hpp libmaus/suffixsort/SAISUtils.hpp libmaus/suffixsort/OSInduce.hpp libmaus/suffixsort/CircularBwt.hpp libmaus/suffixsort/CircularSuffixComparator.hpp libmaus/suffixsort/BwtMergeTempFileNameSet.hpp libmaus/suffixsort/BwtMergeZBlock.hpp libmaus/suffixsort/BwtMergeTempFileNameSetVector.hpp libmaus/suffixsort/BwtMergeBlockSortResult.hpp libmaus/suffixsort/BwtMergeZBlockRequest.hpp libmaus/suffixsort/BwtMergeZBlockRequestVector.hpp libmaus/suffixsort/GapMergePacket.hpp libmaus/suffixsort/BwtMergeEnumBase.hpp libmaus/suffixsort/ByteInputTypes.hpp libmaus/suffixsort/CompactInputTypes.hpp libmaus/suffixsort/PacInputTypes.hpp libmaus/suffixsort/PacTermInputTypes.hpp libmaus/suffixsort/Utf8InputTypes.hpp libmaus/suffixsort/Lz4InputTypes.hpp libmaus/suffixsort/GapArrayByteDecoderBuffer.hpp libmaus/suffixsort/GapArrayByte.hpp libmaus/suffixsort/GapArrayByteDecoder.hpp libmaus/suffixsort/GapArrayByteOverflowKeyAccessor.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/suffixsort' test -z "/usr/include/libmaus/suffixtree" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/suffixtree" test -z "/usr/include/libmaus/sv" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/sv" /usr/bin/install -c -m 644 libmaus/suffixtree/CompressedSuffixTree.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/suffixtree' test -z "/usr/include/libmaus/timing" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/timing" /usr/bin/install -c -m 644 libmaus/sv/sv.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/sv' test -z "/usr/include/libmaus/trie" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/trie" /usr/bin/install -c -m 644 libmaus/timing/RealTimeClock.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/timing' test -z "/usr/include/libmaus/types/" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/types/" /usr/bin/install -c -m 644 libmaus/trie/TrieState.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/trie' /usr/bin/install -c -m 644 libmaus/types/types.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/types/' test -z "/usr/include/libmaus/uint" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/uint" test -z "/usr/include/libmaus/util" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/util" /usr/bin/install -c -m 644 libmaus/uint/uint.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/uint' test -z "/usr/include/libmaus/wavelet" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/wavelet" /usr/bin/install -c -m 644 libmaus/wavelet/toWaveletTreeBits.hpp libmaus/wavelet/WaveletTree.hpp libmaus/wavelet/HuffmanWaveletTree.hpp libmaus/wavelet/DynamicHuffmanWaveletTree.hpp libmaus/wavelet/DynamicWaveletTree.hpp libmaus/wavelet/ExternalWaveletGenerator.hpp libmaus/wavelet/ImpWaveletTree.hpp libmaus/wavelet/ImpExternalWaveletGenerator.hpp libmaus/wavelet/ImpExternalWaveletGeneratorHuffmanParallel.hpp libmaus/wavelet/ImpExternalWaveletGeneratorHuffman.hpp libmaus/wavelet/ImpHuffmanWaveletTree.hpp libmaus/wavelet/Utf8ToImpHuffmanWaveletTree.hpp libmaus/wavelet/Utf8ToImpCompactHuffmanWaveletTree.hpp libmaus/wavelet/ImpCompactHuffmanWaveletTree.hpp libmaus/wavelet/ImpExternalWaveletGeneratorCompactHuffman.hpp libmaus/wavelet/ImpExternalWaveletGeneratorCompactHuffmanParallel.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/wavelet' /usr/bin/install -c -m 644 libmaus/util/stringFunctions.hpp libmaus/util/BitList.hpp libmaus/util/VarBitList.hpp libmaus/util/VarList.hpp libmaus/util/IntervalTree.hpp libmaus/util/LookupIntervalTree.hpp libmaus/util/StringSerialisation.hpp libmaus/util/NumberSerialisation.hpp libmaus/util/GetFileSize.hpp libmaus/util/unique_ptr.hpp libmaus/util/shared_ptr.hpp libmaus/util/TempFileNameGenerator.hpp libmaus/util/TempFileNameGeneratorState.hpp libmaus/util/Demangle.hpp libmaus/util/BitsPerNum.hpp libmaus/util/ArgInfo.hpp libmaus/util/Concat.hpp libmaus/util/ConcatRequest.hpp libmaus/util/PosixExecute.hpp libmaus/util/StackTrace.hpp libmaus/util/CompactNumberArray.hpp libmaus/util/ArrayIterator.hpp libmaus/util/OffsetArray.hpp libmaus/util/Array832.hpp libmaus/util/Array864.hpp libmaus/util/NegativeDifferenceArray32.hpp libmaus/util/NegativeDifferenceArray64.hpp libmaus/util/PositiveDifferenceArray32.hpp libmaus/util/PositiveDifferenceArray64.hpp libmaus/util/UniqueIndex.hpp libmaus/util/Terminal.hpp libmaus/util/nstat.hpp libmaus/util/WriteableString.hpp libmaus/util/ForkProcess.hpp libmaus/util/LogPipe.hpp libmaus/util/MoveStack.hpp libmaus/util/LongestIncreasingSubsequence.hpp libmaus/util/utf8.hpp libmaus/util/md5.hpp libmaus/util/md5.h '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/util' /usr/bin/install -c -m 644 libmaus/util/MemLimit.hpp libmaus/util/Histogram.hpp libmaus/util/IncreasingList.hpp libmaus/util/GenericSerialisation.hpp libmaus/util/ConsoleColor.hpp libmaus/util/LogPipeMultiplex.hpp libmaus/util/LogPipeMultiplexGeneric.hpp libmaus/util/iterator.hpp libmaus/util/SaturatingCounter.hpp libmaus/util/I386CacheLineSize.hpp libmaus/util/IncreasingStack.hpp libmaus/util/NearestNeighbourDictionary.hpp libmaus/util/MemUsage.hpp libmaus/util/unordered_set.hpp libmaus/util/unordered_map.hpp libmaus/util/ReverseByteOrder.hpp libmaus/util/SimpleBloomFilter.hpp libmaus/util/SimpleCountingHash.hpp libmaus/util/SimpleHashMap.hpp libmaus/util/SimpleHashSet.hpp libmaus/util/OutputFileNameTools.hpp libmaus/util/LELoad.hpp libmaus/util/GetObject.hpp libmaus/util/PutObject.hpp libmaus/util/PutObjectReverse.hpp libmaus/util/CountPutObject.hpp libmaus/util/CountPutIterator.hpp libmaus/util/PosixFileDescriptor.hpp libmaus/util/DigitTable.hpp libmaus/util/TempFileRemovalContainer.hpp libmaus/util/DynamicLoading.hpp libmaus/util/Object.hpp libmaus/util/KMP.hpp libmaus/util/NumberMapSerialisation.hpp libmaus/util/Utf8BlockIndex.hpp libmaus/util/Utf8DecoderBuffer.hpp libmaus/util/Utf8String.hpp libmaus/util/UnsignedCharVariant.hpp libmaus/util/LSFSim.hpp libmaus/util/ForkProcessLSFSim.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/util' /usr/bin/install -c -m 644 libmaus/util/CountGetObject.hpp libmaus/util/HistogramSet.hpp libmaus/util/GenericIntervalTree.hpp libmaus/util/PosixInputFile.hpp libmaus/util/OctetString.hpp libmaus/util/Utf8StringPairAdapter.hpp libmaus/util/Utf8BlockIndexDecoder.hpp libmaus/util/Utf8DecoderWrapper.hpp libmaus/util/TempFileContainer.hpp libmaus/util/FileTempFileContainer.hpp libmaus/util/MemTempFileContainer.hpp libmaus/util/ImpCompactNumberArray.hpp libmaus/util/ContainerGetObject.hpp libmaus/util/PushBuffer.hpp libmaus/util/SuccinctBorderArray.hpp libmaus/util/LineAccessor.hpp libmaus/util/StringMapCompare.hpp libmaus/util/FreeList.hpp libmaus/util/ToUpperTable.hpp libmaus/util/BorderArray.hpp '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/include/libmaus/util' make[3]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/src' make[2]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/src' make[2]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' make[3]: Entering directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' make[3]: Nothing to be done for `install-exec-am'. test -z "/usr/lib/x86_64-linux-gnu/pkgconfig" || /bin/mkdir -p "/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig" /usr/bin/install -c -m 644 libmaus.pc libmauslsf.pc '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' make[3]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' make[2]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' make[1]: Leaving directory `/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' dh_install -a -O--parallel install -d debian/libmaus0/usr/lib/x86_64-linux-gnu/ cp -a debian/tmp/usr/lib/x86_64-linux-gnu/libmaus.so.0 debian/libmaus0/usr/lib/x86_64-linux-gnu// cp -a debian/tmp/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 debian/libmaus0/usr/lib/x86_64-linux-gnu// cp -a debian/tmp/usr/lib/x86_64-linux-gnu/libmauslsf.so.0 debian/libmaus0/usr/lib/x86_64-linux-gnu// cp -a debian/tmp/usr/lib/x86_64-linux-gnu/libmauslsf.so.0.0.140 debian/libmaus0/usr/lib/x86_64-linux-gnu// cp -a debian/tmp/usr/lib/x86_64-linux-gnu/libmaus_consensus_mod.so debian/libmaus0/usr/lib/x86_64-linux-gnu// cp -a debian/tmp/usr/lib/x86_64-linux-gnu/libmaus_kmlocal_mod.so debian/libmaus0/usr/lib/x86_64-linux-gnu// cp -a debian/tmp/usr/lib/x86_64-linux-gnu/libmaus_scram_mod.so debian/libmaus0/usr/lib/x86_64-linux-gnu// install -d debian/libmaus-dev/usr/include/ cp -a debian/tmp/usr/include/libmaus debian/libmaus-dev/usr/include// install -d debian/libmaus-dev/usr/lib/x86_64-linux-gnu/ cp -a debian/tmp/usr/lib/x86_64-linux-gnu/libmaus.so debian/libmaus-dev/usr/lib/x86_64-linux-gnu// cp -a debian/tmp/usr/lib/x86_64-linux-gnu/libmauslsf.so debian/libmaus-dev/usr/lib/x86_64-linux-gnu// cp -a debian/tmp/usr/lib/x86_64-linux-gnu/libmaus.a debian/libmaus-dev/usr/lib/x86_64-linux-gnu// cp -a debian/tmp/usr/lib/x86_64-linux-gnu/libmauslsf.a debian/libmaus-dev/usr/lib/x86_64-linux-gnu// install -d debian/libmaus-dev/usr/lib/x86_64-linux-gnu/pkgconfig cp -a debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig/libmaus.pc debian/libmaus-dev/usr/lib/x86_64-linux-gnu/pkgconfig/ cp -a debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig/libmauslsf.pc debian/libmaus-dev/usr/lib/x86_64-linux-gnu/pkgconfig/ dh_installdocs -a -O--parallel install -g 0 -o 0 -d debian/libmaus0/usr/share/doc/libmaus0 install -g 0 -o 0 -m 644 -p debian/copyright debian/libmaus0/usr/share/doc/libmaus0/copyright install -g 0 -o 0 -d debian/libmaus-dev/usr/share/doc/libmaus-dev install -g 0 -o 0 -m 644 -p debian/copyright debian/libmaus-dev/usr/share/doc/libmaus-dev/copyright dh_installchangelogs -a -O--parallel install -o 0 -g 0 -p -m644 debian/changelog debian/libmaus0/usr/share/doc/libmaus0/changelog install -o 0 -g 0 -p -m644 debian/changelog debian/libmaus-dev/usr/share/doc/libmaus-dev/changelog dh_installexamples -a -O--parallel dh_installman -a -O--parallel dh_installcatalogs -a -O--parallel dh_installcron -a -O--parallel dh_installdebconf -a -O--parallel install -o 0 -g 0 -d debian/libmaus0/DEBIAN install -o 0 -g 0 -d debian/libmaus-dev/DEBIAN dh_installemacsen -a -O--parallel dh_installifupdown -a -O--parallel dh_installinfo -a -O--parallel dh_installinit -a -O--parallel dh_installmenu -a -O--parallel dh_installmime -a -O--parallel dh_installmodules -a -O--parallel dh_installlogcheck -a -O--parallel dh_installlogrotate -a -O--parallel dh_installpam -a -O--parallel dh_installppp -a -O--parallel dh_installudev -a -O--parallel dh_installwm -a -O--parallel dh_installxfonts -a -O--parallel dh_installgsettings -a -O--parallel dh_bugfiles -a -O--parallel dh_ucf -a -O--parallel dh_lintian -a -O--parallel dh_gconf -a -O--parallel dh_icons -a -O--parallel dh_perl -a -O--parallel dh_usrlocal -a -O--parallel dh_link -a -O--parallel rm -f debian/libmaus0/usr/lib/x86_64-linux-gnu/libmauslsf.so.0 ln -sf libmauslsf.so.0.0.140 debian/libmaus0/usr/lib/x86_64-linux-gnu/libmauslsf.so.0 rm -f debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0 ln -sf libmaus.so.0.0.140 debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0 rm -f debian/libmaus-dev/usr/lib/x86_64-linux-gnu/libmauslsf.so ln -sf libmauslsf.so.0.0.140 debian/libmaus-dev/usr/lib/x86_64-linux-gnu/libmauslsf.so rm -f debian/libmaus-dev/usr/lib/x86_64-linux-gnu/libmaus.so ln -sf libmaus.so.0.0.140 debian/libmaus-dev/usr/lib/x86_64-linux-gnu/libmaus.so dh_compress -a -O--parallel cd debian/libmaus0 chmod a-x usr/share/doc/libmaus0/changelog gzip -9nf usr/share/doc/libmaus0/changelog cd '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' cd debian/libmaus-dev chmod a-x usr/share/doc/libmaus-dev/changelog gzip -9nf usr/share/doc/libmaus-dev/changelog cd '/build/buildd/libmaus-0.0.140+1124~ubuntu12.04.1' dh_fixperms -a -O--parallel find debian/libmaus0 -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libmaus0 ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libmaus0/usr/share/doc -type f ! -regex 'debian/libmaus0/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus0/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 755 find debian/libmaus0/usr/share/man debian/libmaus0/usr/man/ debian/libmaus0/usr/X11*/man/ -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus0 -perm -5 -type f \( -name '*.so.*' -or -name '*.so' -or -name '*.la' -or -name '*.a' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus0/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus0/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus0 -perm -5 -type f \( -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus0/usr/lib/perl5 debian/libmaus0/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X find debian/libmaus0/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libmaus-dev -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libmaus-dev ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libmaus-dev/usr/share/doc -type f ! -regex 'debian/libmaus-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus-dev/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 755 find debian/libmaus-dev/usr/share/man debian/libmaus-dev/usr/man/ debian/libmaus-dev/usr/X11*/man/ -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus-dev -perm -5 -type f \( -name '*.so.*' -or -name '*.so' -or -name '*.la' -or -name '*.a' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus-dev/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus-dev/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus-dev -perm -5 -type f \( -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/libmaus-dev/usr/lib/perl5 debian/libmaus-dev/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X find debian/libmaus-dev/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w dh_strip -a -O--parallel dh_strip debug symbol extraction: disabling for PPA build dh_strip debug symbol extraction: not doing anything since NO_PKG_MANGLE is given strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libmaus0/usr/lib/x86_64-linux-gnu/libmauslsf.so.0.0.140 strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_kmlocal_mod.so strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_consensus_mod.so strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_scram_mod.so strip --strip-debug debian/libmaus-dev/usr/lib/x86_64-linux-gnu/libmauslsf.a strip --strip-debug debian/libmaus-dev/usr/lib/x86_64-linux-gnu/libmaus.a dh_makeshlibs -a -O--parallel rm -f debian/libmaus0/DEBIAN/shlibs echo 'libmauslsf 0 libmaus0' >>debian/libmaus0/DEBIAN/shlibs echo 'libmaus 0 libmaus0' >>debian/libmaus0/DEBIAN/shlibs echo "# Automatically added by dh_makeshlibs">> debian/libmaus0.postinst.debhelper sed "" /usr/share/debhelper/autoscripts/postinst-makeshlibs >> debian/libmaus0.postinst.debhelper echo '# End automatically added section' >> debian/libmaus0.postinst.debhelper echo "# Automatically added by dh_makeshlibs">> debian/libmaus0.postrm.debhelper sed "" /usr/share/debhelper/autoscripts/postrm-makeshlibs >> debian/libmaus0.postrm.debhelper echo '# End automatically added section' >> debian/libmaus0.postrm.debhelper chmod 644 debian/libmaus0/DEBIAN/shlibs chown 0:0 debian/libmaus0/DEBIAN/shlibs (grep -s -v misc:Pre-Depends debian/libmaus0.substvars; echo misc:Pre-Depends=multiarch-support) > debian/libmaus0.substvars.new mv debian/libmaus0.substvars.new debian/libmaus0.substvars rm -f debian/libmaus-dev/DEBIAN/shlibs dh_shlibdeps -a -O--parallel dpkg-shlibdeps -Tdebian/libmaus0.substvars debian/libmaus0/usr/lib/x86_64-linux-gnu/libmauslsf.so.0.0.140 debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_kmlocal_mod.so debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_consensus_mod.so debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_scram_mod.so dpkg-shlibdeps: warning: symbol _ZN7libmaus4util10StackTraceD2Ev used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_consensus_mod.so found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZTVN7libmaus4util10StackTraceE used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_consensus_mod.so found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZTIN7libmaus4util10StackTraceE used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_consensus_mod.so found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZN7libmaus4util10StackTraceC2Ev used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_consensus_mod.so found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZNK7libmaus4util10StackTrace8toStringEb used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_consensus_mod.so found in none of the libraries. dpkg-shlibdeps: warning: symbol pthread_join used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 found in none of the libraries. dpkg-shlibdeps: warning: symbol pthread_spin_lock used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 found in none of the libraries. dpkg-shlibdeps: warning: symbol sem_wait used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 found in none of the libraries. dpkg-shlibdeps: warning: symbol sem_open used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 found in none of the libraries. dpkg-shlibdeps: warning: symbol pthread_spin_destroy used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 found in none of the libraries. dpkg-shlibdeps: warning: symbol sem_post used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 found in none of the libraries. dpkg-shlibdeps: warning: symbol pthread_attr_setstacksize used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 found in none of the libraries. dpkg-shlibdeps: warning: symbol pthread_create used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 found in none of the libraries. dpkg-shlibdeps: warning: symbol sem_getvalue used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 found in none of the libraries. dpkg-shlibdeps: warning: symbol pthread_spin_init used by debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 found in none of the libraries. dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all). dpkg-shlibdeps: warning: dependency on libpthread.so.0 could be avoided if "debian/libmaus0/usr/lib/x86_64-linux-gnu/libmaus_scram_mod.so" were not uselessly linked against it (they use none of its symbols). dh_installdeb -a -O--parallel printf '#!/bin/sh set -e ' > debian/libmaus0/DEBIAN/postinst cat debian/libmaus0.postinst.debhelper >> debian/libmaus0/DEBIAN/postinst chown 0:0 debian/libmaus0/DEBIAN/postinst chmod 755 debian/libmaus0/DEBIAN/postinst printf '#!/bin/sh set -e ' > debian/libmaus0/DEBIAN/postrm cat debian/libmaus0.postrm.debhelper >> debian/libmaus0/DEBIAN/postrm chown 0:0 debian/libmaus0/DEBIAN/postrm chmod 755 debian/libmaus0/DEBIAN/postrm dh_gencontrol -a -O--parallel echo misc:Depends= >> debian/libmaus0.substvars dpkg-gencontrol -plibmaus0 -ldebian/changelog -Tdebian/libmaus0.substvars -Pdebian/libmaus0 dpkg-gencontrol: warning: package libmaus0: unused substitution variable ${misc:Pre-Depends} chmod 644 debian/libmaus0/DEBIAN/control chown 0:0 debian/libmaus0/DEBIAN/control echo misc:Depends= >> debian/libmaus-dev.substvars dpkg-gencontrol -plibmaus-dev -ldebian/changelog -Tdebian/libmaus-dev.substvars -Pdebian/libmaus-dev dpkg-gencontrol: warning: Depends field of package libmaus-dev: unknown substitution variable ${shlibs:Depends} chmod 644 debian/libmaus-dev/DEBIAN/control chown 0:0 debian/libmaus-dev/DEBIAN/control dh_md5sums -a -O--parallel (cd debian/libmaus0 >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null chmod 644 debian/libmaus0/DEBIAN/md5sums chown 0:0 debian/libmaus0/DEBIAN/md5sums (cd debian/libmaus-dev >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null chmod 644 debian/libmaus-dev/DEBIAN/md5sums chown 0:0 debian/libmaus-dev/DEBIAN/md5sums dh_builddeb -a -O--parallel dpkg-deb --build debian/libmaus0 .. INFO: pkgstriptranslations version 116 INFO: Disabling pkgstriptranslations for PPA build INFO: Disabling pkgmaintainermangler for PPA build INFO: Disabling pkgstripfiles for PPA build dpkg-deb: building package `libmaus0' in `../libmaus0_0.0.140+1124~ubuntu12.04.1_amd64.deb'. dpkg-deb --build debian/libmaus-dev .. INFO: pkgstriptranslations version 116 INFO: Disabling pkgstriptranslations for PPA build INFO: Disabling pkgmaintainermangler for PPA build INFO: Disabling pkgstripfiles for PPA build dpkg-deb: building package `libmaus-dev' in `../libmaus-dev_0.0.140+1124~ubuntu12.04.1_amd64.deb'. dpkg-genchanges -B -mUbuntu Build Daemon >../libmaus_0.0.140+1124~ubuntu12.04.1_amd64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build libmaus-0.0.140+1124~ubuntu12.04.1 dpkg-source: info: using options from libmaus-0.0.140+1124~ubuntu12.04.1/debian/source/options: --single-debian-patch dpkg-source: warning: --single-debian-patch is not a valid option for Dpkg::Source::Package::V3::native dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20140708-1321 chroot-autobuild/build/buildd/libmaus0_0.0.140+1124~ubuntu12.04.1_amd64.deb: new debian package, version 2.0. size 778346 bytes: control archive= 876 bytes. 412 bytes, 12 lines control 542 bytes, 7 lines md5sums 135 bytes, 7 lines * postinst #!/bin/sh 132 bytes, 7 lines * postrm #!/bin/sh 41 bytes, 2 lines shlibs Package: libmaus0 Source: libmaus Version: 0.0.140+1124~ubuntu12.04.1 Architecture: amd64 Maintainer: German Tischler Installed-Size: 2053 Depends: libc6 (>= 2.15), libgcc1 (>= 1:4.1.1), libgomp1 (>= 4.4), libsnappy1, libstdc++6 (>= 4.6), staden-io-lib-current Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/gt1/libmaus Description: Runtime library for libmaus chroot-autobuild/build/buildd/libmaus-dev_0.0.140+1124~ubuntu12.04.1_amd64.deb: new debian package, version 2.0. size 1918322 bytes: control archive= 23974 bytes. 481 bytes, 12 lines control 67594 bytes, 827 lines md5sums Package: libmaus-dev Source: libmaus Version: 0.0.140+1124~ubuntu12.04.1 Architecture: amd64 Maintainer: German Tischler Installed-Size: 9978 Depends: libmaus0 (= 0.0.140+1124~ubuntu12.04.1), pkg-config (>= 0.22), zlib1g-dev (>= 1.2.3), libsnappy-dev (>= 1.0.3), seqan-dev (>= 1.2) Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/gt1/libmaus Description: Development files for libmaus (headers, libraries and pkg-config files) chroot-autobuild/build/buildd/libmaus0_0.0.140+1124~ubuntu12.04.1_amd64.deb: drwxr-xr-x root/root 0 2014-07-08 13:21 ./ drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/ drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/lib/ drwxr-xr-x root/root 0 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/ -rw-r--r-- root/root 5944 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/libmauslsf.so.0.0.140 -rw-r--r-- root/root 1650632 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/libmaus.so.0.0.140 -rw-r--r-- root/root 5928 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/libmaus_kmlocal_mod.so -rw-r--r-- root/root 375448 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/libmaus_consensus_mod.so -rw-r--r-- root/root 10096 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/libmaus_scram_mod.so drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/share/ drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2014-07-08 13:21 ./usr/share/doc/libmaus0/ -rw-r--r-- root/root 15384 2014-07-08 12:57 ./usr/share/doc/libmaus0/copyright -rw-r--r-- root/root 4918 2014-07-08 12:57 ./usr/share/doc/libmaus0/changelog.gz lrwxrwxrwx root/root 0 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/libmaus.so.0 -> libmaus.so.0.0.140 lrwxrwxrwx root/root 0 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/libmauslsf.so.0 -> libmauslsf.so.0.0.140 chroot-autobuild/build/buildd/libmaus-dev_0.0.140+1124~ubuntu12.04.1_amd64.deb: drwxr-xr-x root/root 0 2014-07-08 13:21 ./ drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/ drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/lib/ drwxr-xr-x root/root 0 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/ -rw-r--r-- root/root 2180 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/libmauslsf.a -rw-r--r-- root/root 4671240 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/libmaus.a drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/lib/x86_64-linux-gnu/pkgconfig/ -rw-r--r-- root/root 320 2014-07-08 13:20 ./usr/lib/x86_64-linux-gnu/pkgconfig/libmaus.pc -rw-r--r-- root/root 257 2014-07-08 13:20 ./usr/lib/x86_64-linux-gnu/pkgconfig/libmauslsf.pc drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/include/ drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/include/libmaus/ drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/include/libmaus/sorting/ -rw-r--r-- root/root 6743 2014-07-08 13:20 ./usr/include/libmaus/sorting/SerialRadixSort64.hpp -rw-r--r-- root/root 13304 2014-07-08 13:20 ./usr/include/libmaus/sorting/ParallelRadixSort.hpp -rw-r--r-- root/root 4651 2014-07-08 13:20 ./usr/include/libmaus/sorting/MergingReadBack.hpp -rw-r--r-- root/root 6818 2014-07-08 13:20 ./usr/include/libmaus/sorting/MergeStepBinSearchResult.hpp -rw-r--r-- root/root 11217 2014-07-08 13:20 ./usr/include/libmaus/sorting/ParallelStableSort.hpp -rw-r--r-- root/root 17362 2014-07-08 13:20 ./usr/include/libmaus/sorting/InPlaceParallelSort.hpp -rw-r--r-- root/root 11017 2014-07-08 13:20 ./usr/include/libmaus/sorting/PairFileSorting.hpp -rw-r--r-- root/root 2272 2014-07-08 13:20 ./usr/include/libmaus/sorting/SortingBufferedOutputFile.hpp -rw-r--r-- root/root 5714 2014-07-08 13:20 ./usr/include/libmaus/sorting/sorting.hpp drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/include/libmaus/bp/ -rw-r--r-- root/root 18033 2014-07-08 13:20 ./usr/include/libmaus/bp/BalancedParenthesesBase.hpp -rw-r--r-- root/root 11197 2014-07-08 13:20 ./usr/include/libmaus/bp/BalancedParentheses.hpp -rw-r--r-- root/root 1404 2014-07-08 13:20 ./usr/include/libmaus/LibMausConfig.hpp drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/include/libmaus/arithmetic/ -rw-r--r-- root/root 4169 2014-07-08 13:20 ./usr/include/libmaus/arithmetic/ArithEncoder.hpp -rw-r--r-- root/root 4476 2014-07-08 13:20 ./usr/include/libmaus/arithmetic/ArithCoder.hpp -rw-r--r-- root/root 4559 2014-07-08 13:20 ./usr/include/libmaus/arithmetic/ArithDecoder.hpp -rw-r--r-- root/root 3033 2014-07-08 13:20 ./usr/include/libmaus/arithmetic/RangeDecoder.hpp -rw-r--r-- root/root 2043 2014-07-08 13:20 ./usr/include/libmaus/arithmetic/RangeCoder.hpp -rw-r--r-- root/root 3079 2014-07-08 13:20 ./usr/include/libmaus/arithmetic/RangeEncoder.hpp drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/include/libmaus/lcp/ -rw-r--r-- root/root 29114 2014-07-08 13:20 ./usr/include/libmaus/lcp/LCP.hpp -rw-r--r-- root/root 11586 2014-07-08 13:20 ./usr/include/libmaus/lcp/OracleLCP.hpp drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/include/libmaus/math/ -rw-r--r-- root/root 2944 2014-07-08 13:20 ./usr/include/libmaus/math/binom.hpp -rw-r--r-- root/root 1072 2014-07-08 13:20 ./usr/include/libmaus/math/ilog.hpp -rw-r--r-- root/root 900 2014-07-08 13:20 ./usr/include/libmaus/math/primes16.hpp -rw-r--r-- root/root 1339 2014-07-08 13:20 ./usr/include/libmaus/math/Log.hpp -rw-r--r-- root/root 1067 2014-07-08 13:20 ./usr/include/libmaus/math/lowbits.hpp -rw-r--r-- root/root 3162 2014-07-08 13:20 ./usr/include/libmaus/math/DoubleCode.hpp -rw-r--r-- root/root 1146 2014-07-08 13:20 ./usr/include/libmaus/math/ipow.hpp -rw-r--r-- root/root 1022 2014-07-08 13:20 ./usr/include/libmaus/math/iabs.hpp -rw-r--r-- root/root 2041 2014-07-08 13:20 ./usr/include/libmaus/math/MetaLog.hpp -rw-r--r-- root/root 1403 2014-07-08 13:20 ./usr/include/libmaus/math/isqrt.hpp -rw-r--r-- root/root 2833 2014-07-08 13:20 ./usr/include/libmaus/math/numbits.hpp -rw-r--r-- root/root 1348 2014-07-08 13:20 ./usr/include/libmaus/math/bitsPerNum.hpp -rw-r--r-- root/root 1091 2014-07-08 13:20 ./usr/include/libmaus/math/gcd.hpp -rw-r--r-- root/root 1126 2014-07-08 13:20 ./usr/include/libmaus/math/IPower.hpp drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/include/libmaus/lf/ -rw-r--r-- root/root 9843 2014-07-08 13:20 ./usr/include/libmaus/lf/LFZero.hpp -rw-r--r-- root/root 5937 2014-07-08 13:20 ./usr/include/libmaus/lf/RLIndexLF.hpp -rw-r--r-- root/root 2579 2014-07-08 13:20 ./usr/include/libmaus/lf/LF.hpp -rw-r--r-- root/root 3083 2014-07-08 13:20 ./usr/include/libmaus/lf/DArray.hpp -rw-r--r-- root/root 1916 2014-07-08 13:20 ./usr/include/libmaus/lf/QuickLF.hpp -rw-r--r-- root/root 5700 2014-07-08 13:20 ./usr/include/libmaus/lf/ImpWTLF.hpp -rw-r--r-- root/root 3817 2014-07-08 13:20 ./usr/include/libmaus/lf/MultiRankCacheLF.hpp -rw-r--r-- root/root 6974 2014-07-08 13:20 ./usr/include/libmaus/lf/HuffmanLF.hpp -rw-r--r-- root/root 5218 2014-07-08 13:20 ./usr/include/libmaus/lf/LFBase.hpp -rw-r--r-- root/root 6804 2014-07-08 13:20 ./usr/include/libmaus/lf/ImpCompactHuffmanWaveletLF.hpp -rw-r--r-- root/root 9916 2014-07-08 13:20 ./usr/include/libmaus/lf/MultiRankLF.hpp -rw-r--r-- root/root 5959 2014-07-08 13:20 ./usr/include/libmaus/lf/ImpHuffmanWaveletLF.hpp -rw-r--r-- root/root 5717 2014-07-08 13:20 ./usr/include/libmaus/lf/ImpCacheLineRankLF.hpp -rw-r--r-- root/root 3813 2014-07-08 13:20 ./usr/include/libmaus/lf/ImpCacheLineRankLFNonZero.hpp drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/include/libmaus/bambam/ -rw-r--r-- root/root 1824 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamIndexLinearChunk.hpp -rw-r--r-- root/root 1458 2014-07-08 13:20 ./usr/include/libmaus/bambam/CollatingBamDecoderAlignmentInputCallback.hpp -rw-r--r-- root/root 8837 2014-07-08 13:20 ./usr/include/libmaus/bambam/ChromosomeVectorMerge.hpp -rw-r--r-- root/root 2274 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamAlignmentInputCallbackSnappy.hpp -rw-r--r-- root/root 7666 2014-07-08 13:20 ./usr/include/libmaus/bambam/HeaderLine.hpp -rw-r--r-- root/root 1457 2014-07-08 13:20 ./usr/include/libmaus/bambam/EncoderBase.hpp -rw-r--r-- root/root 7336 2014-07-08 13:20 ./usr/include/libmaus/bambam/GeneFlatFileEntry.hpp -rw-r--r-- root/root 38445 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamHeaderLowMem.hpp -rw-r--r-- root/root 2436 2014-07-08 13:20 ./usr/include/libmaus/bambam/MdStringComputationContext.hpp -rw-r--r-- root/root 1373 2014-07-08 13:20 ./usr/include/libmaus/bambam/CigarStringParser.hpp -rw-r--r-- root/root 14335 2014-07-08 13:20 ./usr/include/libmaus/bambam/ReadEndsContainer.hpp -rw-r--r-- root/root 3647 2014-07-08 13:20 ./usr/include/libmaus/bambam/CompactReadEndsBase.hpp -rw-r--r-- root/root 5903 2014-07-08 13:20 ./usr/include/libmaus/bambam/Scram.h -rw-r--r-- root/root 17549 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamWriter.hpp -rw-r--r-- root/root 2485 2014-07-08 13:20 ./usr/include/libmaus/bambam/StrCmpNum.hpp -rw-r--r-- root/root 1201 2014-07-08 13:20 ./usr/include/libmaus/bambam/ReadEndsListNode.hpp -rw-r--r-- root/root 21108 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamAlignmentEncoderBase.hpp -rw-r--r-- root/root 2035 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamMergeCoordinate.hpp -rw-r--r-- root/root 3692 2014-07-08 13:20 ./usr/include/libmaus/bambam/ScramEncoder.hpp -rw-r--r-- root/root 5567 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamParallelRewrite.hpp -rw-r--r-- root/root 1955 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamAlignmentHeapComparator.hpp -rw-r--r-- root/root 3719 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamAuxFilterVector.hpp -rw-r--r-- root/root 3704 2014-07-08 13:20 ./usr/include/libmaus/bambam/CompactReadEndsComparator.hpp -rw-r--r-- root/root 1884 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamAlignmentPrinter.hpp -rw-r--r-- root/root 9485 2014-07-08 13:20 ./usr/include/libmaus/bambam/ScramDecoder.hpp -rw-r--r-- root/root 56475 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamAlignment.hpp -rw-r--r-- root/root 21918 2014-07-08 13:20 ./usr/include/libmaus/bambam/CollatingBamDecoder.hpp -rw-r--r-- root/root 8951 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamAlignmentSortingCircularHashEntryOverflow.hpp -rw-r--r-- root/root 2207 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamAlignmentSnappyInput.hpp -rw-r--r-- root/root 2469 2014-07-08 13:20 ./usr/include/libmaus/bambam/AlignmentValidity.hpp -rw-r--r-- root/root 5417 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamCat.hpp -rw-r--r-- root/root 9195 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamIndex.hpp -rw-r--r-- root/root 4483 2014-07-08 13:20 ./usr/include/libmaus/bambam/SnappyAlignmentMergeInput.hpp -rw-r--r-- root/root 2561 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamHeaderUpdate.hpp -rw-r--r-- root/root 1385 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamIndexBin.hpp -rw-r--r-- root/root 5553 2014-07-08 13:20 ./usr/include/libmaus/bambam/ReadGroup.hpp -rw-r--r-- root/root 1878 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamAlignmentExpungeCallback.hpp -rw-r--r-- root/root 4087 2014-07-08 13:20 ./usr/include/libmaus/bambam/BamFlagBase.hpp 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13:20 ./usr/include/libmaus/btree/ -rw-r--r-- root/root 12035 2014-07-08 13:20 ./usr/include/libmaus/btree/btree.hpp drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/include/libmaus/bitbtree/ -rw-r--r-- root/root 54708 2014-07-08 13:20 ./usr/include/libmaus/bitbtree/bitbtree.hpp drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/include/libmaus/eta/ -rw-r--r-- root/root 2251 2014-07-08 13:20 ./usr/include/libmaus/eta/LinearETA.hpp drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/share/ drwxr-xr-x root/root 0 2014-07-08 13:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2014-07-08 13:21 ./usr/share/doc/libmaus-dev/ -rw-r--r-- root/root 15384 2014-07-08 12:57 ./usr/share/doc/libmaus-dev/copyright -rw-r--r-- root/root 4918 2014-07-08 12:57 ./usr/share/doc/libmaus-dev/changelog.gz lrwxrwxrwx root/root 0 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/libmaus.so -> libmaus.so.0.0.140 lrwxrwxrwx root/root 0 2014-07-08 13:21 ./usr/lib/x86_64-linux-gnu/libmauslsf.so -> libmauslsf.so.0.0.140 libmaus_0.0.140+1124~ubuntu12.04.1_amd64.changes: Format: 1.8 Date: Tue, 08 Jul 2014 12:57:16 +0000 Source: libmaus Binary: libmaus0 libmaus-dev Architecture: amd64 Version: 0.0.140+1124~ubuntu12.04.1 Distribution: precise Urgency: low Maintainer: Ubuntu Build Daemon Changed-By: German Tischler Description: libmaus-dev - Development files for libmaus (headers, libraries and pkg-config libmaus0 - Runtime library for libmaus Changes: libmaus (0.0.140+1124~ubuntu12.04.1) precise; urgency=low . * Auto build. Checksums-Sha1: e7aec78febf13d5601585dc570dfba788379d7d5 778346 libmaus0_0.0.140+1124~ubuntu12.04.1_amd64.deb aa6331714d1d56b3322016e1e7cc110d8b72145b 1918322 libmaus-dev_0.0.140+1124~ubuntu12.04.1_amd64.deb Checksums-Sha256: 93f200fce1f6008e9084437c3aabe00bfbd4d7aaa2cf7f97fda0dc6f81a2863d 778346 libmaus0_0.0.140+1124~ubuntu12.04.1_amd64.deb 6e177b6ed0336cfba820606f219e6f57f9ae51309019d5358dc74cfecca25f46 1918322 libmaus-dev_0.0.140+1124~ubuntu12.04.1_amd64.deb Files: 024e5e75c87c8dbe78914be74511a68e 778346 libs optional libmaus0_0.0.140+1124~ubuntu12.04.1_amd64.deb 70aa90455d9a1e31c94aca702a91aa21 1918322 libdevel optional libmaus-dev_0.0.140+1124~ubuntu12.04.1_amd64.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20140708-1321 Build needed 00:16:13, 761720k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-6164876'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-6164876/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-6164876'] Unmounting chroot for build PACKAGEBUILD-6164876... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-6164876'] Removing build PACKAGEBUILD-6164876