RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: 2.6.24-32-xen #1 SMP Thu Jul 12 14:30:40 UTC 2012 x86_64 Buildd toolchain package versions: launchpad-buildd_113~0.IS.08.04 python-lpbuildd_113~0.IS.08.04 bzr-builder_0.7.2+bzr156-0ubuntu1~1.IS.8.04 bzr_2.4.0-0ubuntu2~11.IS.8.04. Syncing the system clock with the buildd NTP service... 23 Aug 00:33:05 ntpdate[3420]: step time server 10.211.37.1 offset -246923.068564 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '7ac5a377484f57d585149663344d1fb82d0d67e3', '/home/buildd/filecache-default/c021ff3d3373fb2201b3008c0ece6808393ff246'] Uncompressing the tarball... Unpacking chroot for build 7ac5a377484f57d585149663344d1fb82d0d67e3 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '7ac5a377484f57d585149663344d1fb82d0d67e3'] Mounting chroot for build 7ac5a377484f57d585149663344d1fb82d0d67e3 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '7ac5a377484f57d585149663344d1fb82d0d67e3', 'deb http://ppa.launchpad.net/mvo/freeglut-multiarch/ubuntu precise main', 'deb http://ftpmaster.internal/ubuntu precise main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu precise-security main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu precise-updates main restricted universe multiverse'] Overriding sources.list in build-7ac5a377484f57d585149663344d1fb82d0d67e3 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '7ac5a377484f57d585149663344d1fb82d0d67e3', 'amd64'] Updating debian chroot for build 7ac5a377484f57d585149663344d1fb82d0d67e3 Ign http://ppa.launchpad.net precise InRelease Ign http://ftpmaster.internal precise InRelease Ign http://ftpmaster.internal precise-security InRelease Ign http://ftpmaster.internal precise-updates InRelease Get:1 http://ppa.launchpad.net precise Release.gpg [316 B] Get:2 http://ftpmaster.internal precise Release.gpg [198 B] Get:3 http://ftpmaster.internal precise-security Release.gpg [198 B] Get:4 http://ftpmaster.internal precise-updates Release.gpg [198 B] Get:5 http://ftpmaster.internal precise Release [49.6 kB] Get:6 http://ppa.launchpad.net precise Release [11.9 kB] Get:7 http://ftpmaster.internal precise-security Release [49.6 kB] Ign http://ppa.launchpad.net precise Release Get:8 http://ppa.launchpad.net precise/main amd64 Packages [10.3 kB] Ign http://ppa.launchpad.net precise/main TranslationIndex Get:9 http://ftpmaster.internal precise-updates Release [49.6 kB] Ign http://ppa.launchpad.net precise/main Translation-en Get:10 http://ftpmaster.internal precise/main amd64 Packages [1273 kB] Get:11 http://ftpmaster.internal precise/restricted amd64 Packages [8452 B] Get:12 http://ftpmaster.internal precise/universe amd64 Packages [4786 kB] Get:13 http://ftpmaster.internal precise/multiverse amd64 Packages [119 kB] Get:14 http://ftpmaster.internal precise/main TranslationIndex [3706 B] Get:15 http://ftpmaster.internal precise/multiverse TranslationIndex [2676 B] Get:16 http://ftpmaster.internal precise/restricted TranslationIndex [2596 B] Get:17 http://ftpmaster.internal precise/universe TranslationIndex [2922 B] Get:18 http://ftpmaster.internal precise-security/main amd64 Packages [156 kB] Get:19 http://ftpmaster.internal precise-security/restricted amd64 Packages [3969 B] Get:20 http://ftpmaster.internal precise-security/universe amd64 Packages [39.4 kB] Get:21 http://ftpmaster.internal precise-security/multiverse amd64 Packages [2180 B] Get:22 http://ftpmaster.internal precise-security/main TranslationIndex [73 B] Get:23 http://ftpmaster.internal precise-security/multiverse TranslationIndex [71 B] Get:24 http://ftpmaster.internal precise-security/restricted TranslationIndex [71 B] Get:25 http://ftpmaster.internal precise-security/universe TranslationIndex [73 B] Get:26 http://ftpmaster.internal precise-updates/main amd64 Packages [372 kB] Get:27 http://ftpmaster.internal precise-updates/restricted amd64 Packages [6755 B] Get:28 http://ftpmaster.internal precise-updates/universe amd64 Packages [123 kB] Get:29 http://ftpmaster.internal precise-updates/multiverse amd64 Packages [8677 B] Get:30 http://ftpmaster.internal precise-updates/main TranslationIndex [3564 B] Get:31 http://ftpmaster.internal precise-updates/multiverse TranslationIndex [2605 B] Get:32 http://ftpmaster.internal precise-updates/restricted TranslationIndex [2461 B] Get:33 http://ftpmaster.internal precise-updates/universe TranslationIndex [2850 B] Get:34 http://ftpmaster.internal precise/main Translation-en [726 kB] Get:35 http://ftpmaster.internal precise/multiverse Translation-en [93.4 kB] Get:36 http://ftpmaster.internal precise/restricted Translation-en [2395 B] Get:37 http://ftpmaster.internal precise/universe Translation-en [3341 kB] Get:38 http://ftpmaster.internal precise-security/main Translation-en [74.2 kB] Get:39 http://ftpmaster.internal precise-security/multiverse Translation-en [995 B] Get:40 http://ftpmaster.internal precise-security/restricted Translation-en [978 B] Get:41 http://ftpmaster.internal precise-security/universe Translation-en [24.5 kB] Get:42 http://ftpmaster.internal precise-updates/main Translation-en [180 kB] Get:43 http://ftpmaster.internal precise-updates/multiverse Translation-en [5414 B] Get:44 http://ftpmaster.internal precise-updates/restricted Translation-en [1484 B] Get:45 http://ftpmaster.internal precise-updates/universe Translation-en [73.5 kB] Fetched 11.6 MB in 8s (1392 kB/s) Reading package lists... W: GPG error: http://ppa.launchpad.net precise Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 129196470EB12F05 Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: apt apt-transport-https base-files initscripts libapt-pkg4.12 libgcrypt11 libglib2.0-0 libgnutls26 libgssapi-krb5-2 libk5crypto3 libkrb5-3 libkrb5support0 libldap-2.4-2 libsasl2-2 libsqlite3-0 libssl1.0.0 libtasn1-3 libudev0 linux-libc-dev openssl perl perl-base perl-modules python2.7-minimal sysv-rc sysvinit-utils tzdata udev upstart 29 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 20.0 MB of archives. After this operation, 37.9 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! base-files perl perl-base perl-modules libapt-pkg4.12 apt libssl1.0.0 libsqlite3-0 libglib2.0-0 libudev0 libgcrypt11 libtasn1-3 libgnutls26 libk5crypto3 libgssapi-krb5-2 libkrb5-3 libkrb5support0 libsasl2-2 libldap-2.4-2 python2.7-minimal tzdata sysvinit-utils sysv-rc initscripts upstart udev apt-transport-https linux-libc-dev openssl Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise-updates/main base-files amd64 6.5ubuntu6.2 [69.7 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise-updates/main perl amd64 5.14.2-6ubuntu2.1 [4416 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise-updates/main perl-base amd64 5.14.2-6ubuntu2.1 [1498 kB] Get:4 http://ftpmaster.internal/ubuntu/ precise-updates/main perl-modules all 5.14.2-6ubuntu2.1 [3396 kB] Get:5 http://ftpmaster.internal/ubuntu/ precise-security/main libapt-pkg4.12 amd64 0.8.16~exp12ubuntu10.2 [932 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise-security/main apt amd64 0.8.16~exp12ubuntu10.2 [1092 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise-security/main libssl1.0.0 amd64 1.0.1-4ubuntu5.3 [1011 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise-updates/main libsqlite3-0 amd64 3.7.9-2ubuntu1.1 [349 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise-updates/main libglib2.0-0 amd64 2.32.3-0ubuntu1 [1199 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise-updates/main libudev0 amd64 175-0ubuntu9.1 [30.0 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise-updates/main libgcrypt11 amd64 1.5.0-3ubuntu0.1 [280 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise-security/main libtasn1-3 amd64 2.10-1ubuntu1.1 [43.3 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise-updates/main libgnutls26 amd64 2.12.14-5ubuntu3.1 [459 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise-security/main libk5crypto3 amd64 1.10+dfsg~beta1-2ubuntu0.3 [80.1 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise-security/main libgssapi-krb5-2 amd64 1.10+dfsg~beta1-2ubuntu0.3 [118 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise-security/main libkrb5-3 amd64 1.10+dfsg~beta1-2ubuntu0.3 [355 kB] Get:17 http://ftpmaster.internal/ubuntu/ precise-security/main libkrb5support0 amd64 1.10+dfsg~beta1-2ubuntu0.3 [23.8 kB] Get:18 http://ftpmaster.internal/ubuntu/ precise-updates/main libsasl2-2 amd64 2.1.25.dfsg1-3ubuntu0.1 [69.1 kB] Get:19 http://ftpmaster.internal/ubuntu/ precise-updates/main libldap-2.4-2 amd64 2.4.28-1.1ubuntu4.1 [186 kB] Get:20 http://ftpmaster.internal/ubuntu/ precise-updates/main python2.7-minimal amd64 2.7.3-0ubuntu3.1 [1741 kB] Get:21 http://ftpmaster.internal/ubuntu/ precise-updates/main tzdata all 2012e-0ubuntu0.12.04 [438 kB] Get:22 http://ftpmaster.internal/ubuntu/ precise-updates/main sysvinit-utils amd64 2.88dsf-13.10ubuntu11.1 [60.2 kB] Get:23 http://ftpmaster.internal/ubuntu/ precise-updates/main sysv-rc all 2.88dsf-13.10ubuntu11.1 [44.6 kB] Get:24 http://ftpmaster.internal/ubuntu/ precise-updates/main initscripts amd64 2.88dsf-13.10ubuntu11.1 [28.1 kB] Get:25 http://ftpmaster.internal/ubuntu/ precise-updates/main upstart amd64 1.5-0ubuntu7 [311 kB] Get:26 http://ftpmaster.internal/ubuntu/ precise-updates/main udev amd64 175-0ubuntu9.1 [323 kB] Get:27 http://ftpmaster.internal/ubuntu/ precise-security/main apt-transport-https amd64 0.8.16~exp12ubuntu10.2 [16.3 kB] Get:28 http://ftpmaster.internal/ubuntu/ precise-security/main linux-libc-dev amd64 3.2.0-29.46 [871 kB] Get:29 http://ftpmaster.internal/ubuntu/ precise-security/main openssl amd64 1.0.1-4ubuntu5.3 [523 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 20.0 MB in 11s (1671 kB/s) (Reading database ... 12243 files and directories currently installed.) Preparing to replace base-files 6.5ubuntu6 (using .../base-files_6.5ubuntu6.2_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (6.5ubuntu6.2) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12243 files and directories currently installed.) Preparing to replace perl 5.14.2-6ubuntu2 (using .../perl_5.14.2-6ubuntu2.1_amd64.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.14.2-6ubuntu2 (using .../perl-base_5.14.2-6ubuntu2.1_amd64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.14.2-6ubuntu2.1) ... (Reading database ... 12243 files and directories currently installed.) Preparing to replace perl-modules 5.14.2-6ubuntu2 (using .../perl-modules_5.14.2-6ubuntu2.1_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace libapt-pkg4.12 0.8.16~exp12ubuntu10 (using .../libapt-pkg4.12_0.8.16~exp12ubuntu10.2_amd64.deb) ... Unpacking replacement libapt-pkg4.12 ... Setting up libapt-pkg4.12 (0.8.16~exp12ubuntu10.2) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12243 files and directories currently installed.) Preparing to replace apt 0.8.16~exp12ubuntu10 (using .../apt_0.8.16~exp12ubuntu10.2_amd64.deb) ... Unpacking replacement apt ... Setting up apt (0.8.16~exp12ubuntu10.2) ... gpg: key 437D05B5: "Ubuntu Archive Automatic Signing Key " not changed gpg: key FBB75451: "Ubuntu CD Image Automatic Signing Key " not changed gpg: Total number processed: 2 gpg: unchanged: 2 (Reading database ... 12243 files and directories currently installed.) Preparing to replace libssl1.0.0 1.0.1-4ubuntu3 (using .../libssl1.0.0_1.0.1-4ubuntu5.3_amd64.deb) ... Unpacking replacement libssl1.0.0 ... Setting up libssl1.0.0 (1.0.1-4ubuntu5.3) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12243 files and directories currently installed.) Preparing to replace libsqlite3-0 3.7.9-2ubuntu1 (using .../libsqlite3-0_3.7.9-2ubuntu1.1_amd64.deb) ... Unpacking replacement libsqlite3-0 ... Preparing to replace libglib2.0-0 2.32.1-0ubuntu2 (using .../libglib2.0-0_2.32.3-0ubuntu1_amd64.deb) ... Unpacking replacement libglib2.0-0 ... Preparing to replace libudev0 175-0ubuntu9 (using .../libudev0_175-0ubuntu9.1_amd64.deb) ... Unpacking replacement libudev0 ... Preparing to replace libgcrypt11 1.5.0-3 (using .../libgcrypt11_1.5.0-3ubuntu0.1_amd64.deb) ... Unpacking replacement libgcrypt11 ... Preparing to replace libtasn1-3 2.10-1ubuntu1 (using .../libtasn1-3_2.10-1ubuntu1.1_amd64.deb) ... Unpacking replacement libtasn1-3 ... Preparing to replace libgnutls26 2.12.14-5ubuntu3 (using .../libgnutls26_2.12.14-5ubuntu3.1_amd64.deb) ... Unpacking replacement libgnutls26 ... Preparing to replace libk5crypto3 1.10+dfsg~beta1-2 (using .../libk5crypto3_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Unpacking replacement libk5crypto3 ... Preparing to replace libgssapi-krb5-2 1.10+dfsg~beta1-2 (using .../libgssapi-krb5-2_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Unpacking replacement libgssapi-krb5-2 ... Preparing to replace libkrb5-3 1.10+dfsg~beta1-2 (using .../libkrb5-3_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Unpacking replacement libkrb5-3 ... Preparing to replace libkrb5support0 1.10+dfsg~beta1-2 (using .../libkrb5support0_1.10+dfsg~beta1-2ubuntu0.3_amd64.deb) ... Unpacking replacement libkrb5support0 ... Preparing to replace libsasl2-2 2.1.25.dfsg1-3 (using .../libsasl2-2_2.1.25.dfsg1-3ubuntu0.1_amd64.deb) ... Unpacking replacement libsasl2-2 ... Preparing to replace libldap-2.4-2 2.4.28-1.1ubuntu4 (using .../libldap-2.4-2_2.4.28-1.1ubuntu4.1_amd64.deb) ... Unpacking replacement libldap-2.4-2 ... Preparing to replace python2.7-minimal 2.7.3-0ubuntu3 (using .../python2.7-minimal_2.7.3-0ubuntu3.1_amd64.deb) ... Unpacking replacement python2.7-minimal ... Setting up python2.7-minimal (2.7.3-0ubuntu3.1) ... (Reading database ... 12243 files and directories currently installed.) Preparing to replace tzdata 2012b-1 (using .../tzdata_2012e-0ubuntu0.12.04_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2012e-0ubuntu0.12.04) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Aug 20 04:00:14 UTC 2012. Universal Time is now: Mon Aug 20 04:00:14 UTC 2012. Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 12243 files and directories currently installed.) Preparing to replace sysvinit-utils 2.88dsf-13.10ubuntu11 (using .../sysvinit-utils_2.88dsf-13.10ubuntu11.1_amd64.deb) ... Unpacking replacement sysvinit-utils ... Preparing to replace sysv-rc 2.88dsf-13.10ubuntu11 (using .../sysv-rc_2.88dsf-13.10ubuntu11.1_all.deb) ... Unpacking replacement sysv-rc ... Preparing to replace initscripts 2.88dsf-13.10ubuntu11 (using .../initscripts_2.88dsf-13.10ubuntu11.1_amd64.deb) ... Unpacking replacement initscripts ... Preparing to replace upstart 1.5-0ubuntu5 (using .../upstart_1.5-0ubuntu7_amd64.deb) ... Unpacking replacement upstart ... Preparing to replace udev 175-0ubuntu9 (using .../udev_175-0ubuntu9.1_amd64.deb) ... Adding 'diversion of /sbin/udevadm to /sbin/udevadm.upgrade by fake-udev' Unpacking replacement udev ... Preparing to replace apt-transport-https 0.8.16~exp12ubuntu10 (using .../apt-transport-https_0.8.16~exp12ubuntu10.2_amd64.deb) ... Unpacking replacement apt-transport-https ... Preparing to replace linux-libc-dev 3.2.0-23.36 (using .../linux-libc-dev_3.2.0-29.46_amd64.deb) ... Unpacking replacement linux-libc-dev ... Preparing to replace openssl 1.0.1-4ubuntu3 (using .../openssl_1.0.1-4ubuntu5.3_amd64.deb) ... Unpacking replacement openssl ... Setting up libsqlite3-0 (3.7.9-2ubuntu1.1) ... Setting up libglib2.0-0 (2.32.3-0ubuntu1) ... No schema files found: doing nothing. Setting up libudev0 (175-0ubuntu9.1) ... Setting up libgcrypt11 (1.5.0-3ubuntu0.1) ... Setting up libtasn1-3 (2.10-1ubuntu1.1) ... Setting up libgnutls26 (2.12.14-5ubuntu3.1) ... Setting up libkrb5support0 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libk5crypto3 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libkrb5-3 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libgssapi-krb5-2 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libsasl2-2 (2.1.25.dfsg1-3ubuntu0.1) ... Setting up libldap-2.4-2 (2.4.28-1.1ubuntu4.1) ... Setting up sysvinit-utils (2.88dsf-13.10ubuntu11.1) ... Setting up sysv-rc (2.88dsf-13.10ubuntu11.1) ... Setting up apt-transport-https (0.8.16~exp12ubuntu10.2) ... Setting up linux-libc-dev (3.2.0-29.46) ... Setting up openssl (1.0.1-4ubuntu5.3) ... Setting up perl-modules (5.14.2-6ubuntu2.1) ... Setting up upstart (1.5-0ubuntu7) ... Installing new version of config file /etc/logrotate.d/upstart ... Setting up udev (175-0ubuntu9.1) ... invoke-rc.d: policy-rc.d denied execution of restart. Removing 'diversion of /sbin/udevadm to /sbin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up perl (5.14.2-6ubuntu2.1) ... Setting up initscripts (2.88dsf-13.10ubuntu11.1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '7ac5a377484f57d585149663344d1fb82d0d67e3', 'amd64', 'precise', '--nolog', '--batch', '--archive=ubuntu', '--dist=precise', '--purpose=PPA', '--architecture=amd64', '--comp=main', 'maqview_0.2.5-1build1.dsc'] Initiating build 7ac5a377484f57d585149663344d1fb82d0d67e3 with 2 jobs across 2 processor cores. Automatic build of maqview_0.2.5-1build1 on lakoocha by sbuild/amd64 1.170.5 Build started at 20120820-0400 ****************************************************************************** maqview_0.2.5-1build1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 8), autotools-dev, automake, freeglut3-dev, quilt Checking for already installed source dependencies... debhelper: missing autotools-dev: missing automake: missing freeglut3-dev: missing quilt: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper autotools-dev automake freeglut3-dev quilt Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf bsdmainutils dh-apparmor diffstat file freeglut3 gettext gettext-base groff-base html2text intltool-debian libcroco3 libdrm-dev libgettextpo0 libgl1-mesa-dev libgl1-mesa-glx libglapi-mesa libglu1-mesa libglu1-mesa-dev libice-dev libice6 libkms1 libmagic1 libpipeline1 libpthread-stubs0 libpthread-stubs0-dev libsm-dev libsm6 libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-glx0 libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxml2 libxt-dev libxt6 libxxf86vm1 m4 man-db mesa-common-dev po-debconf x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev x11proto-xext-dev xorg-sgml-doctools xtrans-dev Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc libtool wamerican wordlist whois vacation dh-make gettext-doc groff libxcb-doc less www-browser libmail-box-perl procmail graphviz default-mta mail-transport-agent Recommended packages: curl wget lynx-cur libgl1-mesa-dri libx11-doc xml-core libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autotools-dev bsdmainutils debhelper dh-apparmor diffstat file freeglut3 freeglut3-dev gettext gettext-base groff-base html2text intltool-debian libcroco3 libdrm-dev libgettextpo0 libgl1-mesa-dev libgl1-mesa-glx libglapi-mesa libglu1-mesa libglu1-mesa-dev libice-dev libice6 libkms1 libmagic1 libpipeline1 libpthread-stubs0 libpthread-stubs0-dev libsm-dev libsm6 libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-glx0 libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxml2 libxt-dev libxt6 libxxf86vm1 m4 man-db mesa-common-dev po-debconf quilt x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev x11proto-xext-dev xorg-sgml-doctools xtrans-dev 0 upgraded, 64 newly installed, 0 to remove and 0 not upgraded. Need to get 12.9 MB of archives. After this operation, 44.0 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libpipeline1 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libxext6 libxml2 libglapi-mesa libx11-xcb1 libxcb-glx0 libxdamage1 libxfixes3 libxxf86vm1 libgl1-mesa-glx freeglut3 libcroco3 libunistring0 libgettextpo0 x11-common libice6 libkms1 libsm6 libxt6 libglu1-mesa libmagic1 file bsdmainutils gettext-base groff-base man-db m4 autoconf autotools-dev automake html2text gettext intltool-debian po-debconf dh-apparmor debhelper diffstat xorg-sgml-doctools x11proto-core-dev libxau-dev libxdmcp-dev x11proto-input-dev x11proto-kb-dev xtrans-dev libpthread-stubs0 libpthread-stubs0-dev libxcb1-dev libx11-dev libdrm-dev mesa-common-dev x11proto-xext-dev libxext-dev libgl1-mesa-dev libglu1-mesa-dev libice-dev libsm-dev libxt-dev freeglut3-dev quilt Authentication warning overridden. Get:1 http://ppa.launchpad.net/mvo/freeglut-multiarch/ubuntu/ precise/main freeglut3 amd64 2.6.0-1ubuntu3 [140 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise/main libpipeline1 amd64 1.2.1-1 [26.5 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise/main libxau6 amd64 1:1.0.6-4 [8392 B] Get:4 http://ftpmaster.internal/ubuntu/ precise/main libxdmcp6 amd64 1:1.1.0-4 [12.7 kB] Get:5 http://ppa.launchpad.net/mvo/freeglut-multiarch/ubuntu/ precise/main freeglut3-dev amd64 2.6.0-1ubuntu3 [217 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise/main libxcb1 amd64 1.8.1-1 [44.7 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise/main libx11-data all 2:1.4.99.1-0ubuntu2 [168 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise/main libx11-6 amd64 2:1.4.99.1-0ubuntu2 [762 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise/main libxext6 amd64 2:1.3.0-3build1 [33.2 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise-security/main libxml2 amd64 2.7.8.dfsg-5.1ubuntu4.1 [673 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise-updates/main libglapi-mesa amd64 8.0.3+8.0.2-0ubuntu3.2 [21.3 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise/main libx11-xcb1 amd64 2:1.4.99.1-0ubuntu2 [10.3 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise/main libxcb-glx0 amd64 1.8.1-1 [26.4 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise/main libxdamage1 amd64 1:1.1.3-2build1 [7560 B] Get:15 http://ftpmaster.internal/ubuntu/ precise/main libxfixes3 amd64 1:5.0-4ubuntu4 [12.6 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise/main libxxf86vm1 amd64 1:1.1.1-2build1 [11.6 kB] Get:17 http://ftpmaster.internal/ubuntu/ precise-updates/main libgl1-mesa-glx amd64 8.0.3+8.0.2-0ubuntu3.2 [104 kB] Get:18 http://ftpmaster.internal/ubuntu/ precise/main libcroco3 amd64 0.6.5-1 [99.3 kB] Get:19 http://ftpmaster.internal/ubuntu/ precise/main libunistring0 amd64 0.9.3-5 [427 kB] Get:20 http://ftpmaster.internal/ubuntu/ precise/main libgettextpo0 amd64 0.18.1.1-5ubuntu3 [120 kB] Get:21 http://ftpmaster.internal/ubuntu/ precise/main x11-common all 1:7.6+12ubuntu1 [57.7 kB] Get:22 http://ftpmaster.internal/ubuntu/ precise/main libice6 amd64 2:1.0.7-2build1 [46.1 kB] Get:23 http://ftpmaster.internal/ubuntu/ precise/main libkms1 amd64 2.4.32-1ubuntu1 [9098 B] Get:24 http://ftpmaster.internal/ubuntu/ precise/main libsm6 amd64 2:1.2.0-2build1 [18.1 kB] Get:25 http://ftpmaster.internal/ubuntu/ precise/main libxt6 amd64 1:1.1.1-2build1 [186 kB] Get:26 http://ftpmaster.internal/ubuntu/ precise-updates/main libglu1-mesa amd64 8.0.3+8.0.2-0ubuntu3.2 [161 kB] Get:27 http://ftpmaster.internal/ubuntu/ precise/main libmagic1 amd64 5.09-2 [217 kB] Get:28 http://ftpmaster.internal/ubuntu/ precise/main file amd64 5.09-2 [19.7 kB] Get:29 http://ftpmaster.internal/ubuntu/ precise/main bsdmainutils amd64 8.2.3ubuntu1 [200 kB] Get:30 http://ftpmaster.internal/ubuntu/ precise/main gettext-base amd64 0.18.1.1-5ubuntu3 [80.0 kB] Get:31 http://ftpmaster.internal/ubuntu/ precise/main groff-base amd64 1.21-7 [1046 kB] Get:32 http://ftpmaster.internal/ubuntu/ precise/main man-db amd64 2.6.1-2 [756 kB] Get:33 http://ftpmaster.internal/ubuntu/ precise/main m4 amd64 1.4.16-2ubuntu1 [200 kB] Get:34 http://ftpmaster.internal/ubuntu/ precise/main autoconf all 2.68-1ubuntu2 [560 kB] Get:35 http://ftpmaster.internal/ubuntu/ precise/main autotools-dev all 20120210.1ubuntu1 [42.4 kB] Get:36 http://ftpmaster.internal/ubuntu/ precise/main automake all 1:1.11.3-1ubuntu2 [571 kB] Get:37 http://ftpmaster.internal/ubuntu/ precise/main html2text amd64 1.3.2a-15 [104 kB] Get:38 http://ftpmaster.internal/ubuntu/ precise/main gettext amd64 0.18.1.1-5ubuntu3 [1188 kB] Get:39 http://ftpmaster.internal/ubuntu/ precise/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:40 http://ftpmaster.internal/ubuntu/ precise/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:41 http://ftpmaster.internal/ubuntu/ precise-security/main dh-apparmor all 2.7.102-0ubuntu3.1 [9546 B] Get:42 http://ftpmaster.internal/ubuntu/ precise/main debhelper all 9.20120115ubuntu3 [616 kB] Get:43 http://ftpmaster.internal/ubuntu/ precise/main diffstat amd64 1.54-1 [22.7 kB] Get:44 http://ftpmaster.internal/ubuntu/ precise/main xorg-sgml-doctools all 1:1.10-1 [12.0 kB] Get:45 http://ftpmaster.internal/ubuntu/ precise/main x11proto-core-dev all 7.0.22-1 [299 kB] Get:46 http://ftpmaster.internal/ubuntu/ precise/main libxau-dev amd64 1:1.0.6-4 [10.5 kB] Get:47 http://ftpmaster.internal/ubuntu/ precise/main libxdmcp-dev amd64 1:1.1.0-4 [26.9 kB] Get:48 http://ftpmaster.internal/ubuntu/ precise/main x11proto-input-dev all 2.1.99.6-1 [133 kB] Get:49 http://ftpmaster.internal/ubuntu/ precise/main x11proto-kb-dev all 1.0.5-2 [27.6 kB] Get:50 http://ftpmaster.internal/ubuntu/ precise/main xtrans-dev all 1.2.6-2 [82.9 kB] Get:51 http://ftpmaster.internal/ubuntu/ precise/main libpthread-stubs0 amd64 0.3-3 [3258 B] Get:52 http://ftpmaster.internal/ubuntu/ precise/main libpthread-stubs0-dev amd64 0.3-3 [2866 B] Get:53 http://ftpmaster.internal/ubuntu/ precise/main libxcb1-dev amd64 1.8.1-1 [81.6 kB] Get:54 http://ftpmaster.internal/ubuntu/ precise/main libx11-dev amd64 2:1.4.99.1-0ubuntu2 [908 kB] Get:55 http://ftpmaster.internal/ubuntu/ precise/main libdrm-dev amd64 2.4.32-1ubuntu1 [182 kB] Get:56 http://ftpmaster.internal/ubuntu/ precise-updates/main mesa-common-dev amd64 8.0.3+8.0.2-0ubuntu3.2 [244 kB] Get:57 http://ftpmaster.internal/ubuntu/ precise/main x11proto-xext-dev all 7.2.0-3 [253 kB] Get:58 http://ftpmaster.internal/ubuntu/ precise/main libxext-dev amd64 2:1.3.0-3build1 [159 kB] Get:59 http://ftpmaster.internal/ubuntu/ precise-updates/main libgl1-mesa-dev amd64 8.0.3+8.0.2-0ubuntu3.2 [4976 B] Get:60 http://ftpmaster.internal/ubuntu/ precise-updates/main libglu1-mesa-dev amd64 8.0.3+8.0.2-0ubuntu3.2 [197 kB] Get:61 http://ftpmaster.internal/ubuntu/ precise/main libice-dev amd64 2:1.0.7-2build1 [133 kB] Get:62 http://ftpmaster.internal/ubuntu/ precise/main libsm-dev amd64 2:1.2.0-2build1 [89.5 kB] Get:63 http://ftpmaster.internal/ubuntu/ precise/main libxt-dev amd64 1:1.1.1-2build1 [490 kB] Get:64 http://ftpmaster.internal/ubuntu/ precise/main quilt all 0.50-2 [287 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.9 MB in 9s (1402 kB/s) Selecting previously unselected package libpipeline1. (Reading database ... 12245 files and directories currently installed.) Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_amd64.deb) ... Selecting previously unselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_amd64.deb) ... Selecting previously unselected package libxdmcp6. Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_amd64.deb) ... Selecting previously unselected package libxcb1. Unpacking libxcb1 (from .../libxcb1_1.8.1-1_amd64.deb) ... Selecting previously unselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.4.99.1-0ubuntu2_all.deb) ... Selecting previously unselected package libx11-6. Unpacking libx11-6 (from .../libx11-6_2%3a1.4.99.1-0ubuntu2_amd64.deb) ... Selecting previously unselected package libxext6. Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3build1_amd64.deb) ... Selecting previously unselected package libxml2. Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-5.1ubuntu4.1_amd64.deb) ... 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Unpacking libxt-dev (from .../libxt-dev_1%3a1.1.1-2build1_amd64.deb) ... Selecting previously unselected package freeglut3-dev. Unpacking freeglut3-dev (from .../freeglut3-dev_2.6.0-1ubuntu3_amd64.deb) ... Selecting previously unselected package quilt. Unpacking quilt (from .../archives/quilt_0.50-2_all.deb) ... Setting up libpipeline1 (1.2.1-1) ... Setting up libxau6 (1:1.0.6-4) ... Setting up libxdmcp6 (1:1.1.0-4) ... Setting up libxcb1 (1.8.1-1) ... Setting up libx11-data (2:1.4.99.1-0ubuntu2) ... Setting up libx11-6 (2:1.4.99.1-0ubuntu2) ... Setting up libxext6 (2:1.3.0-3build1) ... Setting up libxml2 (2.7.8.dfsg-5.1ubuntu4.1) ... Setting up libglapi-mesa (8.0.3+8.0.2-0ubuntu3.2) ... Setting up libx11-xcb1 (2:1.4.99.1-0ubuntu2) ... Setting up libxcb-glx0 (1.8.1-1) ... Setting up libxdamage1 (1:1.1.3-2build1) ... Setting up libxfixes3 (1:5.0-4ubuntu4) ... Setting up libxxf86vm1 (1:1.1.1-2build1) ... Setting up libgl1-mesa-glx (8.0.3+8.0.2-0ubuntu3.2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/mesa/ld.so.conf to provide /etc/ld.so.conf.d/x86_64-linux-gnu_GL.conf (x86_64-linux-gnu_gl_conf) in auto mode. Setting up freeglut3 (2.6.0-1ubuntu3) ... Setting up libcroco3 (0.6.5-1) ... Setting up libunistring0 (0.9.3-5) ... Setting up libgettextpo0 (0.18.1.1-5ubuntu3) ... Setting up x11-common (1:7.6+12ubuntu1) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6 (2:1.0.7-2build1) ... Setting up libkms1 (2.4.32-1ubuntu1) ... Setting up libsm6 (2:1.2.0-2build1) ... Setting up libxt6 (1:1.1.1-2build1) ... Setting up libglu1-mesa (8.0.3+8.0.2-0ubuntu3.2) ... Setting up libmagic1 (5.09-2) ... Setting up file (5.09-2) ... Setting up bsdmainutils (8.2.3ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up gettext-base (0.18.1.1-5ubuntu3) ... Setting up groff-base (1.21-7) ... Setting up man-db (2.6.1-2) ... Building database of manual pages ... Setting up m4 (1.4.16-2ubuntu1) ... Setting up autoconf (2.68-1ubuntu2) ... Setting up autotools-dev (20120210.1ubuntu1) ... Setting up automake (1:1.11.3-1ubuntu2) ... update-alternatives: using /usr/bin/automake-1.11 to provide /usr/bin/automake (automake) in auto mode. Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-5ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up dh-apparmor (2.7.102-0ubuntu3.1) ... Setting up debhelper (9.20120115ubuntu3) ... Setting up diffstat (1.54-1) ... Setting up xorg-sgml-doctools (1:1.10-1) ... Setting up x11proto-core-dev (7.0.22-1) ... Setting up libxau-dev (1:1.0.6-4) ... Setting up libxdmcp-dev (1:1.1.0-4) ... Setting up x11proto-input-dev (2.1.99.6-1) ... Setting up x11proto-kb-dev (1.0.5-2) ... Setting up xtrans-dev (1.2.6-2) ... Setting up libpthread-stubs0 (0.3-3) ... Setting up libpthread-stubs0-dev (0.3-3) ... Setting up libxcb1-dev (1.8.1-1) ... Setting up libx11-dev (2:1.4.99.1-0ubuntu2) ... Setting up libdrm-dev (2.4.32-1ubuntu1) ... Setting up mesa-common-dev (8.0.3+8.0.2-0ubuntu3.2) ... Setting up x11proto-xext-dev (7.2.0-3) ... Setting up libxext-dev (2:1.3.0-3build1) ... Setting up libgl1-mesa-dev (8.0.3+8.0.2-0ubuntu3.2) ... Setting up libglu1-mesa-dev (8.0.3+8.0.2-0ubuntu3.2) ... Setting up libice-dev (2:1.0.7-2build1) ... Setting up libsm-dev (2:1.2.0-2build1) ... Setting up libxt-dev (1:1.1.1-2build1) ... Setting up freeglut3-dev (2.6.0-1ubuntu3) ... Setting up quilt (0.50-2) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.15-0ubuntu10 make_3.81-8.1ubuntu1 dpkg-dev_1.16.1.2ubuntu7 gcc-4.6_4.6.3-1ubuntu5 g++-4.6_4.6.3-1ubuntu5 binutils_2.22-6ubuntu1 libstdc++6-4.6-dev_4.6.3-1ubuntu5 libstdc++6_4.6.3-1ubuntu5 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Fri Aug 17 15:14:29 2012 UTC using DSA key ID 5662C734 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./maqview_0.2.5-1build1.dsc dpkg-source: info: extracting maqview in maqview-0.2.5 dpkg-source: info: unpacking maqview_0.2.5.orig.tar.gz dpkg-source: info: unpacking maqview_0.2.5-1build1.debian.tar.gz dpkg-source: info: applying fix-gcc-4.5.patch dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): -D_FORTIFY_SOURCE=2 dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): -Wl,-Bsymbolic-functions -Wl,-z,relro dpkg-buildpackage: source package maqview dpkg-buildpackage: source version 0.2.5-1build1 dpkg-source --before-build maqview-0.2.5 dpkg-buildpackage: host architecture amd64 /usr/bin/fakeroot debian/rules clean dh clean dh_testdir debian/rules override_dh_auto_clean make[1]: Entering directory `/build/buildd/maqview-0.2.5' [ ! -f Makefile ] || /usr/bin/make distclean dh_auto_clean rm -f aclocal.m4 config.guess config.h.in config.sub configure depcomp install-sh Makefile.in missing rm -f *.1 make[1]: Leaving directory `/build/buildd/maqview-0.2.5' dh_clean debian/rules build dh build dh_testdir debian/rules override_dh_auto_configure make[1]: Entering directory `/build/buildd/maqview-0.2.5' ./autogen.sh running: aclocal running: autoheader running: automake -a configure.ac:5: installing `./config.guess' configure.ac:5: installing `./config.sub' configure.ac:3: installing `./install-sh' configure.ac:3: installing `./missing' Makefile.am: installing `./depcomp' running: autoconf ./configure checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking GL/glut.h usability... yes checking GL/glut.h presence... yes checking for GL/glut.h... yes checking for glutMouseWheelFunc in -lglut... yes configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands make -f Makefile.generic maqview.1 make[2]: Entering directory `/build/buildd/maqview-0.2.5' pod2man --center "Bioinformatics Tools" --release "maqview-0.2.4" maqview.pod > maqview.1 make[2]: Leaving directory `/build/buildd/maqview-0.2.5' ### The *.class files in the source package can be reproduced by simply running # javac MaqDataClient.java ### however, it is unclear whether this code is used at all make[1]: Leaving directory `/build/buildd/maqview-0.2.5' dh_auto_build make[1]: Entering directory `/build/buildd/maqview-0.2.5' make all-am make[2]: Entering directory `/build/buildd/maqview-0.2.5' gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT zrio_main.o -MD -MP -MF .deps/zrio_main.Tpo -c -o zrio_main.o zrio_main.c mv -f .deps/zrio_main.Tpo .deps/zrio_main.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT btree.o -MD -MP -MF .deps/btree.Tpo -c -o btree.o btree.c btree.c: In function 'btree_load': btree.c:284:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] btree.c:295:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] btree.c:296:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] btree.c:297:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] btree.c:298:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] mv -f .deps/btree.Tpo .deps/btree.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT maqmap_index.o -MD -MP -MF .deps/maqmap_index.Tpo -c -o maqmap_index.o maqmap_index.c maqmap_index.c: In function 'notify': maqmap_index.c:43:69: warning: unused parameter 'pos' [-Wunused-parameter] maqmap_index.c: In function 'read_map_index': maqmap_index.c:387:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] maqmap_index.c: In function 'read_map_next_to': maqmap_index.c:403:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] mv -f .deps/maqmap_index.Tpo .deps/maqmap_index.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT zrio.o -MD -MP -MF .deps/zrio.Tpo -c -o zrio.o zrio.c zrio.c: In function 'get_max_dist': zrio.c:437:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] zrio.c: In function 'build_index': zrio.c:466:24: warning: variable 'state' set but not used [-Wunused-but-set-variable] zrio.c: In function 'load_access': zrio.c:356:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] zrio.c:364:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] zrio.c:365:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] zrio.c:366:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] mv -f .deps/zrio.Tpo .deps/zrio.Po g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -MT stdhashc.o -MD -MP -MF .deps/stdhashc.Tpo -c -o stdhashc.o stdhashc.cc mv -f .deps/stdhashc.Tpo .deps/stdhashc.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT cns_cache.o -MD -MP -MF .deps/cns_cache.Tpo -c -o cns_cache.o cns_cache.c cns_cache.c: In function 'cns_cache_put': cns_cache.c:284:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] cns_cache.c:321:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] cns_cache.c:361:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] cns_cache.c: In function 'open_cns_cache': cns_cache.c:193:8: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] cns_cache.c:203:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] cns_cache.c:204:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] cns_cache.c:205:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] mv -f .deps/cns_cache.Tpo .deps/cns_cache.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT const.o -MD -MP -MF .deps/const.Tpo -c -o const.o const.c mv -f .deps/const.Tpo .deps/const.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT adler32.o -MD -MP -MF .deps/adler32.Tpo -c -o adler32.o adler32.c mv -f .deps/adler32.Tpo .deps/adler32.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT compress.o -MD -MP -MF .deps/compress.Tpo -c -o compress.o compress.c mv -f .deps/compress.Tpo .deps/compress.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT crc32.o -MD -MP -MF .deps/crc32.Tpo -c -o crc32.o crc32.c mv -f .deps/crc32.Tpo .deps/crc32.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT deflate.o -MD -MP -MF .deps/deflate.Tpo -c -o deflate.o deflate.c mv -f .deps/deflate.Tpo .deps/deflate.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT gzio.o -MD -MP -MF .deps/gzio.Tpo -c -o gzio.o gzio.c mv -f .deps/gzio.Tpo .deps/gzio.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT inffast.o -MD -MP -MF .deps/inffast.Tpo -c -o inffast.o inffast.c inffast.c: In function 'inflate_fast_zr': inffast.c:394:4: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:469:9: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:477:10: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:489:9: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:496:7: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:498:7: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:500:7: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:505:7: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:508:8: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:516:7: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:518:7: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:520:7: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:525:7: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] inffast.c:528:8: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] mv -f .deps/inffast.Tpo .deps/inffast.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT inflate.o -MD -MP -MF .deps/inflate.Tpo -c -o inflate.o inflate.c mv -f .deps/inflate.Tpo .deps/inflate.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT infback.o -MD -MP -MF .deps/infback.Tpo -c -o infback.o infback.c mv -f .deps/infback.Tpo .deps/infback.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT inftrees.o -MD -MP -MF .deps/inftrees.Tpo -c -o inftrees.o inftrees.c mv -f .deps/inftrees.Tpo .deps/inftrees.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT trees.o -MD -MP -MF .deps/trees.Tpo -c -o trees.o trees.c mv -f .deps/trees.Tpo .deps/trees.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT uncompr.o -MD -MP -MF .deps/uncompr.Tpo -c -o uncompr.o uncompr.c mv -f .deps/uncompr.Tpo .deps/uncompr.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT zutil.o -MD -MP -MF .deps/zutil.Tpo -c -o zutil.o zutil.c mv -f .deps/zutil.Tpo .deps/zutil.Po g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Wl,-Bsymbolic-functions -Wl,-z,relro -o zrio zrio_main.o btree.o maqmap_index.o zrio.o stdhashc.o cns_cache.o const.o adler32.o compress.o crc32.o deflate.o gzio.o inffast.o inflate.o infback.o inftrees.o trees.o uncompr.o zutil.o gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT maqmap_index_main.o -MD -MP -MF .deps/maqmap_index_main.Tpo -c -o maqmap_index_main.o maqmap_index_main.c maqmap_index_main.c: In function 'dump_map': maqmap_index_main.c:67:27: warning: unused parameter 'obj' [-Wunused-parameter] mv -f .deps/maqmap_index_main.Tpo .deps/maqmap_index_main.Po g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Wl,-Bsymbolic-functions -Wl,-z,relro -o maqindex maqmap_index_main.o btree.o maqmap_index.o zrio.o stdhashc.o cns_cache.o const.o adler32.o compress.o crc32.o deflate.o gzio.o inffast.o inflate.o infback.o inftrees.o trees.o uncompr.o zutil.o gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT read_cache.o -MD -MP -MF .deps/read_cache.Tpo -c -o read_cache.o read_cache.c mv -f .deps/read_cache.Tpo .deps/read_cache.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT view_goto.o -MD -MP -MF .deps/view_goto.Tpo -c -o view_goto.o view_goto.c view_goto.c: In function 'view_resize': view_goto.c:192:41: warning: unused parameter 'h' [-Wunused-parameter] mv -f .deps/view_goto.Tpo .deps/view_goto.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT view_panel.o -MD -MP -MF .deps/view_panel.Tpo -c -o view_panel.o view_panel.c view_panel.c: In function 'default_pick': view_panel.c:1004:13: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] view_panel.c:1005:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] view_panel.c: In function 'handle_mouse_over': view_panel.c:1109:14: warning: variable 'nav' set but not used [-Wunused-but-set-variable] view_panel.c: In function 'default_mouseReleased': view_panel.c:1176:59: warning: unused parameter 'x' [-Wunused-parameter] view_panel.c:1176:66: warning: unused parameter 'y' [-Wunused-parameter] view_panel.c: In function 'default_mouseWheel': view_panel.c:1236:44: warning: unused parameter 'wheel' [-Wunused-parameter] view_panel.c:1236:70: warning: unused parameter 'x' [-Wunused-parameter] view_panel.c:1236:77: warning: unused parameter 'y' [-Wunused-parameter] view_panel.c: In function 'default_keyTyped': view_panel.c:1250:61: warning: unused parameter 'x' [-Wunused-parameter] view_panel.c:1250:68: warning: unused parameter 'y' [-Wunused-parameter] mv -f .deps/view_panel.Tpo .deps/view_panel.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT gl_gui.o -MD -MP -MF .deps/gl_gui.Tpo -c -o gl_gui.o gl_gui.c gl_gui.c: In function 'GList_mouse': gl_gui.c:127:45: warning: unused parameter 'x' [-Wunused-parameter] mv -f .deps/gl_gui.Tpo .deps/gl_gui.Po gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT MainFrame.o -MD -MP -MF .deps/MainFrame.Tpo -c -o MainFrame.o MainFrame.c MainFrame.c: In function 'main': MainFrame.c:184:9: warning: variable 'h' set but not used [-Wunused-but-set-variable] MainFrame.c:184:6: warning: variable 'w' set but not used [-Wunused-but-set-variable] mv -f .deps/MainFrame.Tpo .deps/MainFrame.Po g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Wl,-Bsymbolic-functions -Wl,-z,relro -o maqview read_cache.o view_goto.o view_panel.o gl_gui.o MainFrame.o btree.o maqmap_index.o zrio.o stdhashc.o cns_cache.o const.o adler32.o compress.o crc32.o deflate.o gzio.o inffast.o inflate.o infback.o inftrees.o trees.o uncompr.o zutil.o -lGL -lGLU -lglut -lm -lX11 gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -DHAVE_FREEGLUT -g -O2 -Wall -W -DMAQ_LONGREADS -MT socket_view.o -MD -MP -MF .deps/socket_view.Tpo -c -o socket_view.o socket_view.c socket_view.c: In function 'custom_socket': socket_view.c:4:11: warning: variable 'no' set but not used [-Wunused-but-set-variable] socket_view.c: In function 'read_full': socket_view.c:20:13: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] socket_view.c: In function 'send_maq_data': socket_view.c:108:3: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] socket_view.c:112:3: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] socket_view.c: In function 'recv_maq_data': socket_view.c:133:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] socket_view.c:139:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] socket_view.c: In function 'runViewServer': socket_view.c:291:44: warning: passing argument 3 of 'accept' from incompatible pointer type [enabled by default] /usr/include/x86_64-linux-gnu/sys/socket.h:214:12: note: expected 'socklen_t * __restrict__' but argument is of type 'size_t *' socket_view.c: In function 'closeViewClient': socket_view.c:405:8: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] mv -f .deps/socket_view.Tpo .deps/socket_view.Po g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Wl,-Bsymbolic-functions -Wl,-z,relro -o maqindex_socks read_cache.o view_goto.o socket_view.o btree.o maqmap_index.o zrio.o stdhashc.o cns_cache.o const.o adler32.o compress.o crc32.o deflate.o gzio.o inffast.o inflate.o infback.o inftrees.o trees.o uncompr.o zutil.o -lGL -lGLU -lglut -lm -lX11 make[2]: Leaving directory `/build/buildd/maqview-0.2.5' make[1]: Leaving directory `/build/buildd/maqview-0.2.5' dh_auto_test /usr/bin/fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_installdirs -a dh_auto_install -a make[1]: Entering directory `/build/buildd/maqview-0.2.5' make[2]: Entering directory `/build/buildd/maqview-0.2.5' test -z "/usr/local/bin" || /bin/mkdir -p "/build/buildd/maqview-0.2.5/debian/maqview/usr/local/bin" /usr/bin/install -c zrio maqindex maqview maqindex_socks '/build/buildd/maqview-0.2.5/debian/maqview/usr/local/bin' make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/build/buildd/maqview-0.2.5' make[1]: Leaving directory `/build/buildd/maqview-0.2.5' debian/rules override_dh_install make[1]: Entering directory `/build/buildd/maqview-0.2.5' mv /build/buildd/maqview-0.2.5/debian/`dh_listpackages`/usr/local/bin /build/buildd/maqview-0.2.5/debian/`dh_listpackages`/usr rm -rf /build/buildd/maqview-0.2.5/debian/`dh_listpackages`/usr/local make[1]: Leaving directory `/build/buildd/maqview-0.2.5' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_installcatalogs -a dh_installcron -a dh_installdebconf -a dh_installemacsen -a dh_installifupdown -a dh_installinfo -a dh_installinit -a dh_installmenu -a dh_installmime -a dh_installmodules -a dh_installlogcheck -a dh_installlogrotate -a dh_installpam -a dh_installppp -a dh_installudev -a dh_installwm -a dh_installxfonts -a dh_installgsettings -a dh_bugfiles -a dh_ucf -a dh_lintian -a dh_gconf -a dh_icons -a dh_perl -a dh_usrlocal -a dh_link -a dh_compress -a dh_fixperms -a dh_strip -a dh_strip debug symbol extraction: disabling for PPA build dh_strip debug symbol extraction: not doing anything since NO_PKG_MANGLE is given dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 116 INFO: Disabling pkgstriptranslations for PPA build INFO: Disabling pkgmaintainermangler for PPA build INFO: Disabling pkgstripfiles for PPA build dpkg-deb: building package `maqview' in `../maqview_0.2.5-1build1_amd64.deb'. dpkg-genchanges -B -mUbuntu Build Daemon >../maqview_0.2.5-1build1_amd64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build maqview-0.2.5 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20120820-0401 chroot-autobuild/build/buildd/maqview_0.2.5-1build1_amd64.deb: new debian package, version 2.0. size 295142 bytes: control archive= 1202 bytes. 1191 bytes, 23 lines control 683 bytes, 11 lines md5sums Package: maqview Version: 0.2.5-1build1 Architecture: amd64 Maintainer: Debian-Med Packaging Team Installed-Size: 623 Depends: freeglut3, libc6 (>= 2.15), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libstdc++6 (>= 4.1.1) Section: science Priority: optional Homepage: http://maq.sourceforge.net/maqview.shtml Description: graphical read alignment viewer for short gene sequences Maqview is graphical read alignment viewer. It is specifically designed for the Maq alignment file and allows you to see the mismatches, base qualities and mapping qualities. Maqview is nothing fancy as Consed or GAP, but just a simple viewer for you to see what happens in a particular region. . In comparison to tgap-maq, the text-based read alignment viewer writen by James Bonfield, Maqview is faster and takes up much less memory and disk space in indexing. This is possibly because tgap aims to be a general-purpose viewer but Maqview fully makes use of the fact that a Maq alignment file has already been sorted. Maqview is also efficient in viewing and provides a command-line tool to quickly retrieve any region in an Maq alignment file. chroot-autobuild/build/buildd/maqview_0.2.5-1build1_amd64.deb: drwxr-xr-x root/root 0 2012-08-20 04:01 ./ drwxr-xr-x root/root 0 2012-08-20 04:01 ./usr/ drwxr-xr-x root/root 0 2012-08-20 04:01 ./usr/bin/ -rwxr-xr-x root/root 177512 2012-08-20 04:01 ./usr/bin/maqview -rwxr-xr-x root/root 142568 2012-08-20 04:01 ./usr/bin/maqindex_socks -rwxr-xr-x root/root 130088 2012-08-20 04:01 ./usr/bin/maqindex -rwxr-xr-x root/root 130056 2012-08-20 04:01 ./usr/bin/zrio drwxr-xr-x root/root 0 2012-08-20 04:01 ./usr/share/ drwxr-xr-x root/root 0 2012-08-20 04:01 ./usr/share/lintian/ drwxr-xr-x root/root 0 2012-08-20 04:01 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 386 2010-11-22 08:47 ./usr/share/lintian/overrides/maqview drwxr-xr-x root/root 0 2012-08-20 04:01 ./usr/share/man/ drwxr-xr-x root/root 0 2012-08-20 04:01 ./usr/share/man/man1/ -rw-r--r-- root/root 3652 2012-08-20 04:01 ./usr/share/man/man1/maqview.1.gz drwxr-xr-x root/root 0 2012-08-20 04:01 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-08-20 04:01 ./usr/share/doc/maqview/ -rw-r--r-- root/root 2121 2008-08-24 03:42 ./usr/share/doc/maqview/README.gz -rw-r--r-- root/root 576 2010-11-22 07:55 ./usr/share/doc/maqview/README.Debian -rw-r--r-- root/root 4587 2010-11-22 07:41 ./usr/share/doc/maqview/copyright -rw-r--r-- root/root 230 2012-08-17 15:14 ./usr/share/doc/maqview/changelog.Debian.gz -rw-r--r-- root/root 1096 2008-03-22 03:06 ./usr/share/doc/maqview/NEWS.gz maqview_0.2.5-1build1_amd64.changes: Format: 1.8 Date: Fri, 17 Aug 2012 17:14:27 +0200 Source: maqview Binary: maqview Architecture: amd64 Version: 0.2.5-1build1 Distribution: precise Urgency: low Maintainer: Ubuntu Build Daemon Changed-By: Michael Vogt Description: maqview - graphical read alignment viewer for short gene sequences Changes: maqview (0.2.5-1build1) precise; urgency=low . * test rebuild Checksums-Sha1: bbfcb67d3caece4ca14b30458f0087e612560754 295142 maqview_0.2.5-1build1_amd64.deb Checksums-Sha256: c8934f1f299d4931c1bcc8f6ec66e0b880dff43007f1c21ad9769ee107491f99 295142 maqview_0.2.5-1build1_amd64.deb Files: a7e9ea5c07492222054712d02a7696d9 295142 science optional maqview_0.2.5-1build1_amd64.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20120820-0401 Build needed 00:00:25, 5900k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '7ac5a377484f57d585149663344d1fb82d0d67e3'] Scanning for processes to kill in build /home/buildd/build-7ac5a377484f57d585149663344d1fb82d0d67e3/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '7ac5a377484f57d585149663344d1fb82d0d67e3'] Unmounting chroot for build 7ac5a377484f57d585149663344d1fb82d0d67e3... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '7ac5a377484f57d585149663344d1fb82d0d67e3'] Removing build 7ac5a377484f57d585149663344d1fb82d0d67e3