RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: 2.6.24-31-xen #1 SMP Tue Jun 12 20:10:18 UTC 2012 x86_64 Buildd toolchain package versions: launchpad-buildd_113~0.IS.08.04 python-lpbuildd_113~0.IS.08.04 bzr-builder_0.7.2+bzr156-0ubuntu1~1.IS.8.04 bzr_2.4.0-0ubuntu2~11.IS.8.04. Syncing the system clock with the buildd NTP service... 27 Aug 16:32:07 ntpdate[3366]: step time server 10.211.37.1 offset -266359.251682 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'b96bff964a2b4491f4ae66b555e71e22bab0f236', '/home/buildd/filecache-default/8eacd1245734d394a672d9a8221787a881f94c87'] Uncompressing the tarball... Unpacking chroot for build b96bff964a2b4491f4ae66b555e71e22bab0f236 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'b96bff964a2b4491f4ae66b555e71e22bab0f236'] Mounting chroot for build b96bff964a2b4491f4ae66b555e71e22bab0f236 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'b96bff964a2b4491f4ae66b555e71e22bab0f236', 'deb http://ppa.launchpad.net/nebc/bio-linux/ubuntu precise main', 'deb http://ftpmaster.internal/ubuntu precise main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu precise-security main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu precise-updates main restricted universe multiverse'] Overriding sources.list in build-b96bff964a2b4491f4ae66b555e71e22bab0f236 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'b96bff964a2b4491f4ae66b555e71e22bab0f236', 'i386'] Updating debian chroot for build b96bff964a2b4491f4ae66b555e71e22bab0f236 Ign http://ftpmaster.internal precise InRelease Ign http://ftpmaster.internal precise-security InRelease Ign http://ftpmaster.internal precise-updates InRelease Get:1 http://ftpmaster.internal precise Release.gpg [198 B] Get:2 http://ftpmaster.internal precise-security Release.gpg [198 B] Get:3 http://ftpmaster.internal precise-updates Release.gpg [198 B] Get:4 http://ftpmaster.internal precise Release [49.6 kB] Ign http://ppa.launchpad.net precise InRelease Get:5 http://ftpmaster.internal precise-security Release [49.6 kB] Get:6 http://ftpmaster.internal precise-updates Release [49.6 kB] Get:7 http://ftpmaster.internal precise/main i386 Packages [1274 kB] Get:8 http://ppa.launchpad.net precise Release.gpg [316 B] Get:9 http://ppa.launchpad.net precise Release [11.9 kB] Ign http://ppa.launchpad.net precise Release Get:10 http://ppa.launchpad.net precise/main i386 Packages [13.1 kB] Ign http://ppa.launchpad.net precise/main TranslationIndex Get:11 http://ftpmaster.internal precise/restricted i386 Packages [8431 B] Ign http://ppa.launchpad.net precise/main Translation-en Get:12 http://ftpmaster.internal precise/universe i386 Packages [4796 kB] Get:13 http://ftpmaster.internal precise/multiverse i386 Packages [121 kB] Get:14 http://ftpmaster.internal precise/main TranslationIndex [3706 B] Get:15 http://ftpmaster.internal precise/multiverse TranslationIndex [2676 B] Get:16 http://ftpmaster.internal precise/restricted TranslationIndex [2596 B] Get:17 http://ftpmaster.internal precise/universe TranslationIndex [2922 B] Get:18 http://ftpmaster.internal precise-security/main i386 Packages [161 kB] Get:19 http://ftpmaster.internal precise-security/restricted i386 Packages [3968 B] Get:20 http://ftpmaster.internal precise-security/universe i386 Packages [41.4 kB] Get:21 http://ftpmaster.internal precise-security/multiverse i386 Packages [2369 B] Get:22 http://ftpmaster.internal precise-security/main TranslationIndex [73 B] Get:23 http://ftpmaster.internal precise-security/multiverse TranslationIndex [71 B] Get:24 http://ftpmaster.internal precise-security/restricted TranslationIndex [71 B] Get:25 http://ftpmaster.internal precise-security/universe TranslationIndex [73 B] Get:26 http://ftpmaster.internal precise-updates/main i386 Packages [378 kB] Get:27 http://ftpmaster.internal precise-updates/restricted i386 Packages [6732 B] Get:28 http://ftpmaster.internal precise-updates/universe i386 Packages [127 kB] Get:29 http://ftpmaster.internal precise-updates/multiverse i386 Packages [9672 B] Get:30 http://ftpmaster.internal precise-updates/main TranslationIndex [3564 B] Get:31 http://ftpmaster.internal precise-updates/multiverse TranslationIndex [2605 B] Get:32 http://ftpmaster.internal precise-updates/restricted TranslationIndex [2461 B] Get:33 http://ftpmaster.internal precise-updates/universe TranslationIndex [2850 B] Get:34 http://ftpmaster.internal precise/main Translation-en [726 kB] Get:35 http://ftpmaster.internal precise/multiverse Translation-en [93.4 kB] Get:36 http://ftpmaster.internal precise/restricted Translation-en [2395 B] Get:37 http://ftpmaster.internal precise/universe Translation-en [3341 kB] Get:38 http://ftpmaster.internal precise-security/main Translation-en [74.6 kB] Get:39 http://ftpmaster.internal precise-security/multiverse Translation-en [995 B] Get:40 http://ftpmaster.internal precise-security/restricted Translation-en [978 B] Get:41 http://ftpmaster.internal precise-security/universe Translation-en [25.6 kB] Get:42 http://ftpmaster.internal precise-updates/main Translation-en [181 kB] Get:43 http://ftpmaster.internal precise-updates/multiverse Translation-en [5414 B] Get:44 http://ftpmaster.internal precise-updates/restricted Translation-en [1484 B] Get:45 http://ftpmaster.internal precise-updates/universe Translation-en [75.6 kB] Fetched 11.7 MB in 7s (1506 kB/s) Reading package lists... W: GPG error: http://ppa.launchpad.net precise Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 759A8E0E5BA15160 Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: apt apt-transport-https base-files initscripts libapt-pkg4.12 libgcrypt11 libglib2.0-0 libgnutls26 libgssapi-krb5-2 libk5crypto3 libkrb5-3 libkrb5support0 libldap-2.4-2 libsasl2-2 libsqlite3-0 libssl1.0.0 libtasn1-3 libudev0 linux-libc-dev openssl perl perl-base perl-modules python2.7-minimal sysv-rc sysvinit-utils tzdata udev upstart 29 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 19.2 MB of archives. After this operation, 39.9 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! base-files perl perl-base perl-modules libapt-pkg4.12 apt libssl1.0.0 libsqlite3-0 libglib2.0-0 libudev0 libgcrypt11 libtasn1-3 libgnutls26 libk5crypto3 libgssapi-krb5-2 libkrb5-3 libkrb5support0 libsasl2-2 libldap-2.4-2 python2.7-minimal tzdata sysvinit-utils sysv-rc initscripts upstart udev apt-transport-https linux-libc-dev openssl Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise-updates/main base-files i386 6.5ubuntu6.2 [65.1 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise-updates/main perl i386 5.14.2-6ubuntu2.1 [3685 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise-updates/main perl-base i386 5.14.2-6ubuntu2.1 [1472 kB] Get:4 http://ftpmaster.internal/ubuntu/ precise-updates/main perl-modules all 5.14.2-6ubuntu2.1 [3396 kB] Get:5 http://ftpmaster.internal/ubuntu/ precise-security/main libapt-pkg4.12 i386 0.8.16~exp12ubuntu10.2 [940 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise-security/main apt i386 0.8.16~exp12ubuntu10.2 [1102 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise-security/main libssl1.0.0 i386 1.0.1-4ubuntu5.3 [1006 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise-updates/main libsqlite3-0 i386 3.7.9-2ubuntu1.1 [354 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise-updates/main libglib2.0-0 i386 2.32.3-0ubuntu1 [1187 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise-updates/main libudev0 i386 175-0ubuntu9.1 [33.6 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise-updates/main libgcrypt11 i386 1.5.0-3ubuntu0.1 [281 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise-security/main libtasn1-3 i386 2.10-1ubuntu1.1 [43.8 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise-updates/main libgnutls26 i386 2.12.14-5ubuntu3.1 [448 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise-security/main libk5crypto3 i386 1.10+dfsg~beta1-2ubuntu0.3 [77.4 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise-security/main libgssapi-krb5-2 i386 1.10+dfsg~beta1-2ubuntu0.3 [120 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise-security/main libkrb5-3 i386 1.10+dfsg~beta1-2ubuntu0.3 [366 kB] Get:17 http://ftpmaster.internal/ubuntu/ precise-security/main libkrb5support0 i386 1.10+dfsg~beta1-2ubuntu0.3 [23.9 kB] Get:18 http://ftpmaster.internal/ubuntu/ precise-updates/main libsasl2-2 i386 2.1.25.dfsg1-3ubuntu0.1 [69.0 kB] Get:19 http://ftpmaster.internal/ubuntu/ precise-updates/main libldap-2.4-2 i386 2.4.28-1.1ubuntu4.1 [186 kB] Get:20 http://ftpmaster.internal/ubuntu/ precise-updates/main python2.7-minimal i386 2.7.3-0ubuntu3.1 [1693 kB] Get:21 http://ftpmaster.internal/ubuntu/ precise-updates/main tzdata all 2012e-0ubuntu0.12.04 [438 kB] Get:22 http://ftpmaster.internal/ubuntu/ precise-updates/main sysvinit-utils i386 2.88dsf-13.10ubuntu11.1 [58.4 kB] Get:23 http://ftpmaster.internal/ubuntu/ precise-updates/main sysv-rc all 2.88dsf-13.10ubuntu11.1 [44.6 kB] Get:24 http://ftpmaster.internal/ubuntu/ precise-updates/main initscripts i386 2.88dsf-13.10ubuntu11.1 [28.1 kB] Get:25 http://ftpmaster.internal/ubuntu/ precise-updates/main upstart i386 1.5-0ubuntu7 [313 kB] Get:26 http://ftpmaster.internal/ubuntu/ precise-updates/main udev i386 175-0ubuntu9.1 [349 kB] Get:27 http://ftpmaster.internal/ubuntu/ precise-security/main apt-transport-https i386 0.8.16~exp12ubuntu10.2 [16.3 kB] Get:28 http://ftpmaster.internal/ubuntu/ precise-security/main linux-libc-dev i386 3.2.0-29.46 [871 kB] Get:29 http://ftpmaster.internal/ubuntu/ precise-security/main openssl i386 1.0.1-4ubuntu5.3 [520 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 19.2 MB in 1s (18.1 MB/s) (Reading database ... 12281 files and directories currently installed.) Preparing to replace base-files 6.5ubuntu6 (using .../base-files_6.5ubuntu6.2_i386.deb) ... Unpacking replacement base-files ... Setting up base-files (6.5ubuntu6.2) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12281 files and directories currently installed.) Preparing to replace perl 5.14.2-6ubuntu2 (using .../perl_5.14.2-6ubuntu2.1_i386.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.14.2-6ubuntu2 (using .../perl-base_5.14.2-6ubuntu2.1_i386.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.14.2-6ubuntu2.1) ... (Reading database ... 12281 files and directories currently installed.) Preparing to replace perl-modules 5.14.2-6ubuntu2 (using .../perl-modules_5.14.2-6ubuntu2.1_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace libapt-pkg4.12 0.8.16~exp12ubuntu10 (using .../libapt-pkg4.12_0.8.16~exp12ubuntu10.2_i386.deb) ... Unpacking replacement libapt-pkg4.12 ... Setting up libapt-pkg4.12 (0.8.16~exp12ubuntu10.2) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12281 files and directories currently installed.) Preparing to replace apt 0.8.16~exp12ubuntu10 (using .../apt_0.8.16~exp12ubuntu10.2_i386.deb) ... Unpacking replacement apt ... Setting up apt (0.8.16~exp12ubuntu10.2) ... gpg: key 437D05B5: "Ubuntu Archive Automatic Signing Key " not changed gpg: key FBB75451: "Ubuntu CD Image Automatic Signing Key " not changed gpg: Total number processed: 2 gpg: unchanged: 2 (Reading database ... 12281 files and directories currently installed.) Preparing to replace libssl1.0.0 1.0.1-4ubuntu3 (using .../libssl1.0.0_1.0.1-4ubuntu5.3_i386.deb) ... Unpacking replacement libssl1.0.0 ... Setting up libssl1.0.0 (1.0.1-4ubuntu5.3) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12281 files and directories currently installed.) Preparing to replace libsqlite3-0 3.7.9-2ubuntu1 (using .../libsqlite3-0_3.7.9-2ubuntu1.1_i386.deb) ... Unpacking replacement libsqlite3-0 ... Preparing to replace libglib2.0-0 2.32.1-0ubuntu2 (using .../libglib2.0-0_2.32.3-0ubuntu1_i386.deb) ... Unpacking replacement libglib2.0-0 ... Preparing to replace libudev0 175-0ubuntu9 (using .../libudev0_175-0ubuntu9.1_i386.deb) ... Unpacking replacement libudev0 ... Preparing to replace libgcrypt11 1.5.0-3 (using .../libgcrypt11_1.5.0-3ubuntu0.1_i386.deb) ... Unpacking replacement libgcrypt11 ... Preparing to replace libtasn1-3 2.10-1ubuntu1 (using .../libtasn1-3_2.10-1ubuntu1.1_i386.deb) ... Unpacking replacement libtasn1-3 ... Preparing to replace libgnutls26 2.12.14-5ubuntu3 (using .../libgnutls26_2.12.14-5ubuntu3.1_i386.deb) ... Unpacking replacement libgnutls26 ... Preparing to replace libk5crypto3 1.10+dfsg~beta1-2 (using .../libk5crypto3_1.10+dfsg~beta1-2ubuntu0.3_i386.deb) ... Unpacking replacement libk5crypto3 ... Preparing to replace libgssapi-krb5-2 1.10+dfsg~beta1-2 (using .../libgssapi-krb5-2_1.10+dfsg~beta1-2ubuntu0.3_i386.deb) ... Unpacking replacement libgssapi-krb5-2 ... Preparing to replace libkrb5-3 1.10+dfsg~beta1-2 (using .../libkrb5-3_1.10+dfsg~beta1-2ubuntu0.3_i386.deb) ... Unpacking replacement libkrb5-3 ... Preparing to replace libkrb5support0 1.10+dfsg~beta1-2 (using .../libkrb5support0_1.10+dfsg~beta1-2ubuntu0.3_i386.deb) ... Unpacking replacement libkrb5support0 ... Preparing to replace libsasl2-2 2.1.25.dfsg1-3 (using .../libsasl2-2_2.1.25.dfsg1-3ubuntu0.1_i386.deb) ... Unpacking replacement libsasl2-2 ... Preparing to replace libldap-2.4-2 2.4.28-1.1ubuntu4 (using .../libldap-2.4-2_2.4.28-1.1ubuntu4.1_i386.deb) ... Unpacking replacement libldap-2.4-2 ... Preparing to replace python2.7-minimal 2.7.3-0ubuntu3 (using .../python2.7-minimal_2.7.3-0ubuntu3.1_i386.deb) ... Unpacking replacement python2.7-minimal ... Setting up python2.7-minimal (2.7.3-0ubuntu3.1) ... (Reading database ... 12281 files and directories currently installed.) Preparing to replace tzdata 2012b-1 (using .../tzdata_2012e-0ubuntu0.12.04_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2012e-0ubuntu0.12.04) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Aug 24 14:35:07 UTC 2012. Universal Time is now: Fri Aug 24 14:35:07 UTC 2012. Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 12281 files and directories currently installed.) Preparing to replace sysvinit-utils 2.88dsf-13.10ubuntu11 (using .../sysvinit-utils_2.88dsf-13.10ubuntu11.1_i386.deb) ... Unpacking replacement sysvinit-utils ... Preparing to replace sysv-rc 2.88dsf-13.10ubuntu11 (using .../sysv-rc_2.88dsf-13.10ubuntu11.1_all.deb) ... Unpacking replacement sysv-rc ... Preparing to replace initscripts 2.88dsf-13.10ubuntu11 (using .../initscripts_2.88dsf-13.10ubuntu11.1_i386.deb) ... Unpacking replacement initscripts ... Preparing to replace upstart 1.5-0ubuntu5 (using .../upstart_1.5-0ubuntu7_i386.deb) ... Unpacking replacement upstart ... Preparing to replace udev 175-0ubuntu9 (using .../udev_175-0ubuntu9.1_i386.deb) ... Adding 'diversion of /sbin/udevadm to /sbin/udevadm.upgrade by fake-udev' Unpacking replacement udev ... Preparing to replace apt-transport-https 0.8.16~exp12ubuntu10 (using .../apt-transport-https_0.8.16~exp12ubuntu10.2_i386.deb) ... Unpacking replacement apt-transport-https ... Preparing to replace linux-libc-dev 3.2.0-23.36 (using .../linux-libc-dev_3.2.0-29.46_i386.deb) ... Unpacking replacement linux-libc-dev ... Preparing to replace openssl 1.0.1-4ubuntu3 (using .../openssl_1.0.1-4ubuntu5.3_i386.deb) ... Unpacking replacement openssl ... Setting up libsqlite3-0 (3.7.9-2ubuntu1.1) ... Setting up libglib2.0-0 (2.32.3-0ubuntu1) ... No schema files found: doing nothing. Setting up libudev0 (175-0ubuntu9.1) ... Setting up libgcrypt11 (1.5.0-3ubuntu0.1) ... Setting up libtasn1-3 (2.10-1ubuntu1.1) ... Setting up libgnutls26 (2.12.14-5ubuntu3.1) ... Setting up libkrb5support0 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libk5crypto3 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libkrb5-3 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libgssapi-krb5-2 (1.10+dfsg~beta1-2ubuntu0.3) ... Setting up libsasl2-2 (2.1.25.dfsg1-3ubuntu0.1) ... Setting up libldap-2.4-2 (2.4.28-1.1ubuntu4.1) ... Setting up sysvinit-utils (2.88dsf-13.10ubuntu11.1) ... Setting up sysv-rc (2.88dsf-13.10ubuntu11.1) ... Setting up apt-transport-https (0.8.16~exp12ubuntu10.2) ... Setting up linux-libc-dev (3.2.0-29.46) ... Setting up openssl (1.0.1-4ubuntu5.3) ... Setting up perl-modules (5.14.2-6ubuntu2.1) ... Setting up upstart (1.5-0ubuntu7) ... Installing new version of config file /etc/logrotate.d/upstart ... Setting up udev (175-0ubuntu9.1) ... invoke-rc.d: policy-rc.d denied execution of restart. Removing 'diversion of /sbin/udevadm to /sbin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up perl (5.14.2-6ubuntu2.1) ... Setting up initscripts (2.88dsf-13.10ubuntu11.1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'b96bff964a2b4491f4ae66b555e71e22bab0f236', 'i386', 'precise', '--nolog', '--batch', '--archive=ubuntu', '--dist=precise', '-A', '--purpose=PPA', '--architecture=i386', '--comp=main', 'trnascan-se_1.3.1-2.dsc'] Initiating build b96bff964a2b4491f4ae66b555e71e22bab0f236 with 1 jobs across 1 processor cores. Automatic build of trnascan-se_1.3.1-2 on marid by sbuild/i386 1.170.5 Build started at 20120824-1435 ****************************************************************************** trnascan-se_1.3.1-2.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 8) Checking for already installed source dependencies... debhelper: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils dh-apparmor file gettext gettext-base groff-base html2text intltool-debian libcroco3 libgettextpo0 libmagic1 libpipeline1 libunistring0 libxml2 man-db po-debconf Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser libmail-box-perl Recommended packages: curl wget lynx-cur xml-core libmail-sendmail-perl The following NEW packages will be installed: bsdmainutils debhelper dh-apparmor file gettext gettext-base groff-base html2text intltool-debian libcroco3 libgettextpo0 libmagic1 libpipeline1 libunistring0 libxml2 man-db po-debconf 0 upgraded, 17 newly installed, 0 to remove and 0 not upgraded. Need to get 5687 kB of archives. After this operation, 17.6 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libpipeline1 libxml2 libcroco3 libunistring0 libgettextpo0 libmagic1 file bsdmainutils gettext-base groff-base man-db html2text gettext intltool-debian po-debconf dh-apparmor debhelper Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise/main libpipeline1 i386 1.2.1-1 [26.1 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise-security/main libxml2 i386 2.7.8.dfsg-5.1ubuntu4.1 [662 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise/main libcroco3 i386 0.6.5-1 [99.7 kB] Get:4 http://ftpmaster.internal/ubuntu/ precise/main libunistring0 i386 0.9.3-5 [432 kB] Get:5 http://ftpmaster.internal/ubuntu/ precise/main libgettextpo0 i386 0.18.1.1-5ubuntu3 [118 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise/main libmagic1 i386 5.09-2 [219 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise/main file i386 5.09-2 [19.4 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise/main bsdmainutils i386 8.2.3ubuntu1 [194 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise/main gettext-base i386 0.18.1.1-5ubuntu3 [58.2 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise/main groff-base i386 1.21-7 [1024 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise/main man-db i386 2.6.1-2 [747 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise/main html2text i386 1.3.2a-15 [101 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise/main gettext i386 0.18.1.1-5ubuntu3 [1122 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise-security/main dh-apparmor all 2.7.102-0ubuntu3.1 [9546 B] Get:17 http://ftpmaster.internal/ubuntu/ precise/main debhelper all 9.20120115ubuntu3 [616 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5687 kB in 0s (18.0 MB/s) Selecting previously unselected package libpipeline1. (Reading database ... 12283 files and directories currently installed.) Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_i386.deb) ... Selecting previously unselected package libxml2. Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-5.1ubuntu4.1_i386.deb) ... Selecting previously unselected package libcroco3. Unpacking libcroco3 (from .../libcroco3_0.6.5-1_i386.deb) ... Selecting previously unselected package libunistring0. Unpacking libunistring0 (from .../libunistring0_0.9.3-5_i386.deb) ... Selecting previously unselected package libgettextpo0. Unpacking libgettextpo0 (from .../libgettextpo0_0.18.1.1-5ubuntu3_i386.deb) ... Selecting previously unselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_5.09-2_i386.deb) ... Selecting previously unselected package file. Unpacking file (from .../archives/file_5.09-2_i386.deb) ... Selecting previously unselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_8.2.3ubuntu1_i386.deb) ... Selecting previously unselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.18.1.1-5ubuntu3_i386.deb) ... Selecting previously unselected package groff-base. Unpacking groff-base (from .../groff-base_1.21-7_i386.deb) ... Selecting previously unselected package man-db. Unpacking man-db (from .../man-db_2.6.1-2_i386.deb) ... Selecting previously unselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-15_i386.deb) ... Selecting previously unselected package gettext. Unpacking gettext (from .../gettext_0.18.1.1-5ubuntu3_i386.deb) ... Selecting previously unselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously unselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2ubuntu1_all.deb) ... Selecting previously unselected package dh-apparmor. Unpacking dh-apparmor (from .../dh-apparmor_2.7.102-0ubuntu3.1_all.deb) ... Selecting previously unselected package debhelper. Unpacking debhelper (from .../debhelper_9.20120115ubuntu3_all.deb) ... Setting up libpipeline1 (1.2.1-1) ... Setting up libxml2 (2.7.8.dfsg-5.1ubuntu4.1) ... Setting up libcroco3 (0.6.5-1) ... Setting up libunistring0 (0.9.3-5) ... Setting up libgettextpo0 (0.18.1.1-5ubuntu3) ... Setting up libmagic1 (5.09-2) ... Setting up file (5.09-2) ... Setting up bsdmainutils (8.2.3ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up gettext-base (0.18.1.1-5ubuntu3) ... Setting up groff-base (1.21-7) ... Setting up man-db (2.6.1-2) ... Building database of manual pages ... Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-5ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up dh-apparmor (2.7.102-0ubuntu3.1) ... Setting up debhelper (9.20120115ubuntu3) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.15-0ubuntu10 make_3.81-8.1ubuntu1 dpkg-dev_1.16.1.2ubuntu7 gcc-4.6_4.6.3-1ubuntu5 g++-4.6_4.6.3-1ubuntu5 binutils_2.22-6ubuntu1 libstdc++6-4.6-dev_4.6.3-1ubuntu5 libstdc++6_4.6.3-1ubuntu5 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Thu Aug 23 16:23:15 2012 UTC using DSA key ID 113960C5 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./trnascan-se_1.3.1-2.dsc dpkg-source: info: extracting trnascan-se in trnascan-se-1.3.1 dpkg-source: info: unpacking trnascan-se_1.3.1.orig.tar.gz dpkg-source: info: unpacking trnascan-se_1.3.1-2.debian.tar.gz dpkg-source: info: applying makefile_edits_for_debian dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): -D_FORTIFY_SOURCE=2 dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): -Wl,-Bsymbolic-functions -Wl,-z,relro dpkg-buildpackage: source package trnascan-se dpkg-buildpackage: source version 1.3.1-2 dpkg-source --before-build trnascan-se-1.3.1 dpkg-buildpackage: host architecture i386 /usr/bin/fakeroot debian/rules clean dh clean dh_testdir debian/rules override_dh_auto_clean make[1]: Entering directory `/build/buildd/trnascan-se-1.3.1' dh_auto_clean make[2]: Entering directory `/build/buildd/trnascan-se-1.3.1' rm -f *.o *~ Makefile.bak core testrun.out \ trnascan-1.4 covels-SE coves-SE eufindtRNA reformat revcomp seqstat shuffle covea coveb covee covet covels coves structcheck mpcovels tRNAscan-SE instman make[2]: Leaving directory `/build/buildd/trnascan-se-1.3.1' rm -f setup.tRNAscan-SE sstofa make[1]: Leaving directory `/build/buildd/trnascan-se-1.3.1' dh_clean debian/rules build dh build dh_testdir dh_auto_configure dh_auto_build make[1]: Entering directory `/build/buildd/trnascan-se-1.3.1' gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c trnascan.c trnascan.c: In function 'fgetseq': trnascan.c:1252:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -DTSCANDIR=\"/usr/share/trnascan-se/lib\" -o trnascan-1.4 trnascan.c trnascan.c: In function 'fgetseq': trnascan.c:1252:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c align.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c dbviterbi.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c debug.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c emit.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c fast-dbviterbi.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c fastmodelmaker.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c konings.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c lengthdist.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c maxmodelmaker.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c misc.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c model.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c modelmaking.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c prior.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c probify.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c save.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c smallviterbi.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c scorestack.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c structs.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c trace.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c viterbi.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c alignio.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c sqerror.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c sqio.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c iupac.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c msf.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c revcomp.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c selex.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c sre_ctype.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c sre_math.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c sre_string.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c stack.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c types.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c gnuregex.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c interleaved.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c getopt.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c scan_main.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -DRELEASE="2.4.4" -DRELEASEDATE="January 2012" -o covels-SE scan_main.o align.o dbviterbi.o debug.o emit.o fast-dbviterbi.o fastmodelmaker.o konings.o lengthdist.o maxmodelmaker.o misc.o model.o modelmaking.o prior.o probify.o save.o smallviterbi.o scorestack.o structs.o trace.o viterbi.o alignio.o sqerror.o sqio.o iupac.o msf.o revcomp.o selex.o sre_ctype.o sre_math.o sre_string.o stack.o types.o gnuregex.o interleaved.o getopt.o -lm gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c score_main.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -DRELEASE="2.4.4" -DRELEASEDATE="January 2012" -o coves-SE score_main.o align.o dbviterbi.o debug.o emit.o fast-dbviterbi.o fastmodelmaker.o konings.o lengthdist.o maxmodelmaker.o misc.o model.o modelmaking.o prior.o probify.o save.o smallviterbi.o scorestack.o structs.o trace.o viterbi.o alignio.o sqerror.o sqio.o iupac.o msf.o revcomp.o selex.o sre_ctype.o sre_math.o sre_string.o stack.o types.o gnuregex.o interleaved.o getopt.o -lm gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c pavesi.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -c eufind_main.c gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -o eufindtRNA eufind_main.o \ pavesi.o alignio.o sqerror.o sqio.o iupac.o msf.o revcomp.o selex.o sre_ctype.o sre_math.o sre_string.o stack.o types.o gnuregex.o interleaved.o getopt.o -lm /usr/bin/perl checkversion.pl sed 's#/tmp#/tmp#g' tRNAscan-SE.src | \ sed 's#bindir = ""#bindir =\"/usr/bin/"#g' | \ sed 's#/usr/local/lib/tRNAscanSE#/usr/share/trnascan-se/lib#g' | \ sed 's#version = ""#version = "1.3.1"#' | \ sed 's#release_date = ""#release_date = "January 2012"#' | \ sed 's#/usr/bin/perl#/usr/bin/perl#' > tRNAscan-SE sed 's#/usr/bin/perl#/usr/bin/perl#' instman.pl > instman sed 's#/usr/bin/perl#/usr/bin/perl#' sstofa.pl > sstofa tRNAscan-SE built The file "setup.tRNAscan-SE" has been created. If you type "source setup.tRNAscan-SE; rehash", the paths in your environment will be updated for this session. To update your environment upon every login, you should add the line: source /build/buildd/trnascan-se-1.3.1/setup.tRNAscan-SE to your ".cshrc" file. If you prefer to manually update your environment variables, be sure to make the following changes: 1) Add /usr/bin to your PATH variable 2) Add /usr/bin to your PERl5LIB variable 3) Add /usr/share/man to your MANPATH variable make[1]: Leaving directory `/build/buildd/trnascan-se-1.3.1' debian/rules override_dh_auto_test make[1]: Entering directory `/build/buildd/trnascan-se-1.3.1' # This only works after installation: #make testrun true make[1]: Leaving directory `/build/buildd/trnascan-se-1.3.1' /usr/bin/fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_installdirs debian/rules override_dh_auto_install make[1]: Entering directory `/build/buildd/trnascan-se-1.3.1' dh_install TPCsignal Dsignal *.cm gcode.* /usr/share/trnascan-se/lib dh_install trnascan-1.4 covels-SE coves-SE eufindtRNA tRNAscan-SE /usr/bin dh_install tRNAscanSE /usr/share/perl5 make[1]: Leaving directory `/build/buildd/trnascan-se-1.3.1' dh_install dh_installdocs dh_installchangelogs dh_installexamples debian/rules override_dh_installman make[1]: Entering directory `/build/buildd/trnascan-se-1.3.1' dh_installman tRNAscan-SE.man make[1]: Leaving directory `/build/buildd/trnascan-se-1.3.1' dh_installcatalogs dh_installcron dh_installdebconf dh_installemacsen dh_installifupdown dh_installinfo dh_installinit dh_installmenu dh_installmime dh_installmodules dh_installlogcheck dh_installlogrotate dh_installpam dh_installppp dh_installudev dh_installwm dh_installxfonts dh_installgsettings dh_bugfiles dh_ucf dh_lintian dh_gconf dh_icons dh_perl dh_usrlocal dh_link dh_compress dh_fixperms dh_strip dh_strip debug symbol extraction: disabling for PPA build dh_strip debug symbol extraction: not doing anything since NO_PKG_MANGLE is given dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package trnascan-se: unused substitution variable ${perl:Depends} dh_md5sums dh_builddeb INFO: pkgstriptranslations version 116 INFO: Disabling pkgstriptranslations for PPA build INFO: Disabling pkgmaintainermangler for PPA build INFO: Disabling pkgstripfiles for PPA build dpkg-deb: building package `trnascan-se' in `../trnascan-se_1.3.1-2_i386.deb'. dpkg-genchanges -b -mUbuntu Build Daemon >../trnascan-se_1.3.1-2_i386.changes dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build trnascan-se-1.3.1 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20120824-1436 chroot-autobuild/build/buildd/trnascan-se_1.3.1-2_i386.deb: new debian package, version 2.0. size 373658 bytes: control archive= 2066 bytes. 606 bytes, 17 lines control 3743 bytes, 52 lines md5sums Package: trnascan-se Version: 1.3.1-2 Architecture: i386 Maintainer: Tim Booth Installed-Size: 1655 Depends: libc6 (>= 2.7) Section: science Priority: extra Description: search for tRNA genes in genomic sequences The principles underlying the tRNAscan-SE program are described in Lowe, T.M. and Eddy, S.R. (1997) Nucleic Acids Res, 25: 955-964. **** If you use this program and find it helpful, please email a short letter of support to lowe@soe.ucsc.edu, describing briefly how tRNAscan-SE has helped advance your research, and voicing your support for future improvements **** chroot-autobuild/build/buildd/trnascan-se_1.3.1-2_i386.deb: drwxr-xr-x root/root 0 2012-08-24 14:36 ./ drwxr-xr-x root/root 0 2012-08-24 14:36 ./usr/ drwxr-xr-x root/root 0 2012-08-24 14:36 ./usr/share/ drwxr-xr-x root/root 0 2012-08-24 14:36 ./usr/share/perl5/ drwxr-xr-x root/root 0 2011-12-14 05:01 ./usr/share/perl5/tRNAscanSE/ -rw-r--r-- root/root 109745 2011-09-09 21:16 ./usr/share/perl5/tRNAscanSE/CM.pm -rw-r--r-- root/root 11602 2011-03-30 19:10 ./usr/share/perl5/tRNAscanSE/Stats.pm -rw-r--r-- root/root 8756 2011-03-30 19:10 ./usr/share/perl5/tRNAscanSE/Eufind.pm -rw-r--r-- root/root 2003 2011-03-30 19:10 ./usr/share/perl5/tRNAscanSE/Constants.pm -rw-r--r-- root/root 8047 2011-03-30 19:10 ./usr/share/perl5/tRNAscanSE/GeneticCode.pm -rw-r--r-- root/root 1517 2011-03-30 19:10 ./usr/share/perl5/tRNAscanSE/LogFile.pm -rw-r--r-- root/root 17603 2011-03-30 19:10 ./usr/share/perl5/tRNAscanSE/Options.pm -rw-r--r-- root/root 24845 2011-03-30 19:10 ./usr/share/perl5/tRNAscanSE/Sequence.pm -rw-r--r-- root/root 20644 2011-03-30 19:10 ./usr/share/perl5/tRNAscanSE/ScanResult.pm -rw-r--r-- root/root 6184 2011-03-30 19:10 ./usr/share/perl5/tRNAscanSE/SS.pm -rw-r--r-- root/root 12802 2011-03-30 19:10 ./usr/share/perl5/tRNAscanSE/Tscan.pm -rw-r--r-- root/root 4575 2011-03-30 19:10 ./usr/share/perl5/tRNAscanSE/Utils.pm drwxr-xr-x root/root 0 2012-08-24 14:36 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-08-24 14:36 ./usr/share/doc/trnascan-se/ -rw-r--r-- root/root 394 2012-08-23 16:07 ./usr/share/doc/trnascan-se/copyright -rw-r--r-- root/root 36 2012-08-23 15:19 ./usr/share/doc/trnascan-se/README.Debian -rw-r--r-- root/root 172 2012-08-23 16:22 ./usr/share/doc/trnascan-se/changelog.Debian.gz drwxr-xr-x root/root 0 2012-08-24 14:36 ./usr/share/man/ drwxr-xr-x root/root 0 2012-08-24 14:36 ./usr/share/man/man1/ -rw-r--r-- root/root 7889 2012-08-24 14:36 ./usr/share/man/man1/tRNAscan-SE.1.gz drwxr-xr-x root/root 0 2012-08-24 14:36 ./usr/share/trnascan-se/ drwxr-xr-x root/root 0 2012-08-24 14:36 ./usr/share/trnascan-se/lib/ -rw-r--r-- root/root 34522 2009-02-09 05:16 ./usr/share/trnascan-se/lib/ESELCinf-c.cm -rw-r--r-- root/root 12959 2011-03-24 07:53 ./usr/share/trnascan-se/lib/TRNAinf-arch-5h-nc.cm -rw-r--r-- root/root 33400 2009-02-09 05:04 ./usr/share/trnascan-se/lib/TRNAinf-bact-ns-c.cm -rw-r--r-- root/root 36969 2009-02-09 05:33 ./usr/share/trnascan-se/lib/PSELCinf-c.cm -rw-r--r-- root/root 20299 2011-03-24 08:55 ./usr/share/trnascan-se/lib/TRNAinf-arch-3h-nc.cm -rw-r--r-- root/root 139 2008-06-04 10:30 ./usr/share/trnascan-se/lib/gcode.ystmito -rw-r--r-- root/root 45507 2008-06-04 10:30 ./usr/share/trnascan-se/lib/PSELC.cm -rw-r--r-- root/root 144 2008-06-04 10:30 ./usr/share/trnascan-se/lib/gcode.vertmito -rw-r--r-- root/root 45507 2008-06-04 10:30 ./usr/share/trnascan-se/lib/TRNA2-euk.cm -rw-r--r-- root/root 38945 2009-02-09 07:07 ./usr/share/trnascan-se/lib/TRNAinf-c.cm -rw-r--r-- root/root 45507 2008-06-04 10:30 ./usr/share/trnascan-se/lib/TRNA2.cm -rw-r--r-- root/root 37296 2009-02-09 07:13 ./usr/share/trnascan-se/lib/TRNAinf-arch-c.cm -rw-r--r-- root/root 14861 2009-08-06 01:38 ./usr/share/trnascan-se/lib/Archaea-BHB-noncan.cm -rw-r--r-- root/root 36924 2009-02-09 05:14 ./usr/share/trnascan-se/lib/TRNAinf-bact-c.cm -rw-r--r-- root/root 57515 2008-06-04 10:30 ./usr/share/trnascan-se/lib/TRNA2ns.cm -rw-r--r-- root/root 47403 2008-06-04 10:30 ./usr/share/trnascan-se/lib/TRNA2-bact.cm -rw-r--r-- root/root 32761 2009-02-09 05:52 ./usr/share/trnascan-se/lib/TRNAinf-euk-ns-c.cm -rw-r--r-- root/root 33396 2009-02-09 05:51 ./usr/share/trnascan-se/lib/TRNAinf-arch-ns-c.cm -rw-r--r-- root/root 420 2008-06-04 10:30 ./usr/share/trnascan-se/lib/TPCsignal -rw-r--r-- root/root 143 2008-06-04 10:30 ./usr/share/trnascan-se/lib/gcode.cilnuc -rw-r--r-- root/root 59411 2008-06-04 10:30 ./usr/share/trnascan-se/lib/TRNA2-archns.cm -rw-r--r-- root/root 224 2008-06-04 10:30 ./usr/share/trnascan-se/lib/Dsignal -rw-r--r-- root/root 57515 2008-06-04 10:30 ./usr/share/trnascan-se/lib/TRNA2-eukns.cm -rw-r--r-- root/root 41083 2008-06-04 10:30 ./usr/share/trnascan-se/lib/ESELC.cm -rw-r--r-- root/root 35830 2009-02-09 05:59 ./usr/share/trnascan-se/lib/TRNAinf-ns-c.cm -rw-r--r-- root/root 143 2008-06-04 10:30 ./usr/share/trnascan-se/lib/gcode.echdmito -rw-r--r-- root/root 36615 2009-02-09 07:05 ./usr/share/trnascan-se/lib/TRNAinf-euk-c.cm -rw-r--r-- root/root 144 2008-06-04 10:30 ./usr/share/trnascan-se/lib/gcode.othmito -rw-r--r-- root/root 47403 2008-06-04 10:30 ./usr/share/trnascan-se/lib/TRNA2-arch.cm -rw-r--r-- root/root 146 2008-06-04 10:30 ./usr/share/trnascan-se/lib/gcode.invmito -rw-r--r-- root/root 59411 2008-06-04 10:30 ./usr/share/trnascan-se/lib/TRNA2-bactns.cm drwxr-xr-x root/root 0 2012-08-24 14:36 ./usr/bin/ -rwxr-xr-x root/root 22464 2012-08-24 14:36 ./usr/bin/trnascan-1.4 -rwxr-xr-x root/root 166996 2012-08-24 14:36 ./usr/bin/covels-SE -rwxr-xr-x root/root 90196 2012-08-24 14:36 ./usr/bin/eufindtRNA -rwxr-xr-x root/root 44863 2012-08-24 14:36 ./usr/bin/tRNAscan-SE -rwxr-xr-x root/root 166836 2012-08-24 14:36 ./usr/bin/coves-SE trnascan-se_1.3.1-2_i386.changes: Format: 1.8 Date: Thu, 23 Aug 2012 17:21:46 +0100 Source: trnascan-se Binary: trnascan-se Architecture: i386 Version: 1.3.1-2 Distribution: precise Urgency: low Maintainer: Ubuntu Build Daemon Changed-By: Tim Booth Description: trnascan-se - search for tRNA genes in genomic sequences Changes: trnascan-se (1.3.1-2) precise; urgency=low . * Initial release. (Closes: #XXXXXX) * Fix mistake in control file Checksums-Sha1: f8ff711faf1325b4624368b0033916b9b4a4aa7b 373658 trnascan-se_1.3.1-2_i386.deb Checksums-Sha256: 209dd3bc49372496fb714782160f8478a1bb311a48b7f0427c02a63fc3a56dfd 373658 trnascan-se_1.3.1-2_i386.deb Files: ae558316e1da14fffbe2ce4f514828de 373658 science extra trnascan-se_1.3.1-2_i386.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20120824-1436 Build needed 00:00:15, 8144k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', 'b96bff964a2b4491f4ae66b555e71e22bab0f236'] Scanning for processes to kill in build /home/buildd/build-b96bff964a2b4491f4ae66b555e71e22bab0f236/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'b96bff964a2b4491f4ae66b555e71e22bab0f236'] Unmounting chroot for build b96bff964a2b4491f4ae66b555e71e22bab0f236... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'b96bff964a2b4491f4ae66b555e71e22bab0f236'] Removing build b96bff964a2b4491f4ae66b555e71e22bab0f236