RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux wani03 2.6.24-32-xen #1 SMP Mon Dec 3 16:12:25 UTC 2012 x86_64 Buildd toolchain package versions: launchpad-buildd_119~0.IS.08.04 python-lpbuildd_119~0.IS.08.04 bzr-builder_0.7.2+bzr156-0ubuntu1~1.IS.8.04 bzr_2.4.0-0ubuntu2~11.IS.8.04. Syncing the system clock with the buildd NTP service... 27 Nov 14:37:08 ntpdate[3374]: step time server 10.211.37.1 offset -71179.823874 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-5271710', '/home/buildd/filecache-default/8cabf0d27c46c059cfb33227b40152ef510fbe4f'] Unpacking chroot for build PACKAGEBUILD-5271710 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-5271710'] Mounting chroot for build PACKAGEBUILD-5271710 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-5271710', 'deb http://ftpmaster.internal/ubuntu trusty main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu trusty-security main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu trusty-updates main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu trusty-proposed main restricted universe multiverse'] Overriding sources.list in build-PACKAGEBUILD-5271710 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-5271710', 'i386'] Updating debian chroot for build PACKAGEBUILD-5271710 Ign http://archive-team.internal trusty InRelease Ign http://archive-team.internal trusty Release.gpg Ign http://ftpmaster.internal trusty InRelease Get:1 http://archive-team.internal trusty Release [723 B] Ign http://ftpmaster.internal trusty-security InRelease Ign http://ftpmaster.internal trusty-updates InRelease Ign http://ftpmaster.internal trusty-proposed InRelease Get:2 http://ftpmaster.internal trusty Release.gpg [933 B] Get:3 http://ftpmaster.internal trusty-security Release.gpg [933 B] Get:4 http://ftpmaster.internal trusty-updates Release.gpg [933 B] Get:5 http://ftpmaster.internal trusty-proposed Release.gpg [933 B] Get:6 http://archive-team.internal trusty/main i386 Packages Get:7 http://ftpmaster.internal trusty Release [49.6 kB] Get:8 http://ftpmaster.internal trusty-security Release [49.6 kB] Ign http://archive-team.internal trusty/main Translation-en Get:9 http://ftpmaster.internal trusty-updates Release [49.6 kB] Get:10 http://ftpmaster.internal trusty-proposed Release [49.6 kB] Get:11 http://ftpmaster.internal trusty/main i386 Packages [1261 kB] Get:12 http://ftpmaster.internal trusty/restricted i386 Packages [12.0 kB] Get:13 http://ftpmaster.internal trusty/universe i386 Packages [5780 kB] Get:14 http://ftpmaster.internal trusty/multiverse i386 Packages [134 kB] Get:15 http://ftpmaster.internal trusty/main Translation-en [727 kB] Get:16 http://ftpmaster.internal trusty/multiverse Translation-en [102 kB] Get:17 http://ftpmaster.internal trusty/restricted Translation-en [3465 B] Get:18 http://ftpmaster.internal trusty/universe Translation-en [3972 kB] Get:19 http://ftpmaster.internal trusty-security/main i386 Packages [14 B] Get:20 http://ftpmaster.internal trusty-security/restricted i386 Packages [14 B] Get:21 http://ftpmaster.internal trusty-security/universe i386 Packages [14 B] Get:22 http://ftpmaster.internal trusty-security/multiverse i386 Packages [14 B] Get:23 http://ftpmaster.internal trusty-security/main Translation-en [14 B] Get:24 http://ftpmaster.internal trusty-security/multiverse Translation-en [14 B] Get:25 http://ftpmaster.internal trusty-security/restricted Translation-en [14 B] Get:26 http://ftpmaster.internal trusty-security/universe Translation-en [14 B] Get:27 http://ftpmaster.internal trusty-updates/main i386 Packages [14 B] Get:28 http://ftpmaster.internal trusty-updates/restricted i386 Packages [14 B] Get:29 http://ftpmaster.internal trusty-updates/universe i386 Packages [14 B] Get:30 http://ftpmaster.internal trusty-updates/multiverse i386 Packages [14 B] Get:31 http://ftpmaster.internal trusty-updates/main Translation-en [14 B] Get:32 http://ftpmaster.internal trusty-updates/multiverse Translation-en [14 B] Get:33 http://ftpmaster.internal trusty-updates/restricted Translation-en [14 B] Get:34 http://ftpmaster.internal trusty-updates/universe Translation-en [14 B] Get:35 http://ftpmaster.internal trusty-proposed/main i386 Packages [59.6 kB] Get:36 http://ftpmaster.internal trusty-proposed/restricted i386 Packages [14 B] Get:37 http://ftpmaster.internal trusty-proposed/universe i386 Packages [259 kB] Get:38 http://ftpmaster.internal trusty-proposed/multiverse i386 Packages [3301 B] Get:39 http://ftpmaster.internal trusty-proposed/main Translation-en [27.6 kB] Get:40 http://ftpmaster.internal trusty-proposed/multiverse Translation-en [3311 B] Get:41 http://ftpmaster.internal trusty-proposed/restricted Translation-en [14 B] Get:42 http://ftpmaster.internal trusty-proposed/universe Translation-en [141 kB] Fetched 12.7 MB in 7s (1615 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libdb5.3 libffi6 libprocps1 The following packages will be upgraded: adduser advancecomp apt apt-transport-https base-files base-passwd binutils build-essential busybox-initramfs bzip2 coreutils cpp-4.8 debconf diffutils dpkg dpkg-dev findutils g++-4.8 gcc-4.8 gcc-4.8-base gnupg gpgv grep ifupdown initramfs-tools initramfs-tools-bin iproute iproute2 kmod libapt-pkg4.12 libasan0 libasn1-8-heimdal libatomic1 libbz2-1.0 libcloog-isl4 libcurl3-gnutls libdbus-1-3 libdpkg-perl libdrm2 libgcc-4.8-dev libgcc1 libgmp10 libgomp1 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libisl10 libitm1 libjson-c2 libjson0 libk5crypto3 libkeyutils1 libkmod2 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libmpc3 libmpfr4 libnih-dbus1 libnih1 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libplymouth2 libpng12-0 libquadmath0 libroken18-heimdal libsasl2-2 libsasl2-modules libsasl2-modules-db libselinux1 libsemanage-common libsemanage1 libsepol1 libsqlite3-0 libstdc++-4.8-dev libstdc++6 libudev1 libusb-0.1-4 libwind0-heimdal linux-libc-dev module-init-tools patch perl perl-base perl-modules plymouth procps sed tar udev upstart 98 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 49.7 MB of archives. After this operation, 5094 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! base-files coreutils diffutils dpkg findutils grep libdb5.3 perl perl-base perl-modules bzip2 libbz2-1.0 sed tar libitm1 libgomp1 libasan0 gcc-4.8-base libgcc1 libatomic1 libquadmath0 libmpfr4 cpp-4.8 binutils libstdc++-4.8-dev g++-4.8 gcc-4.8 libgcc-4.8-dev libstdc++6 libgmp10 libcloog-isl4 libisl10 libmpc3 libapt-pkg4.12 libusb-0.1-4 gpgv gnupg apt base-passwd debconf libpam0g libselinux1 libpam-modules-bin libpam-modules libsemanage-common libsemanage1 libsepol1 libffi6 libp11-kit0 libsqlite3-0 libdbus-1-3 libdrm2 libjson-c2 libkmod2 libnih-dbus1 libnih1 udev libudev1 libprocps1 procps initramfs-tools initramfs-tools-bin busybox-initramfs kmod module-init-tools plymouth libpng12-0 libplymouth2 libroken18-heimdal libasn1-8-heimdal libkeyutils1 libk5crypto3 libgssapi-krb5-2 libkrb5-3 libkrb5support0 libhcrypto4-heimdal libheimbase1-heimdal libwind0-heimdal libhx509-5-heimdal libkrb5-26-heimdal libheimntlm0-heimdal libgssapi3-heimdal libsasl2-modules-db libsasl2-2 libldap-2.4-2 libcurl3-gnutls libpam-runtime adduser iproute2 ifupdown libjson0 upstart apt-transport-https libsasl2-modules advancecomp dpkg-dev libdpkg-perl patch build-essential iproute linux-libc-dev Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main base-files i386 6.12ubuntu5 [62.1 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main coreutils i386 8.21-1ubuntu3 [2438 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main diffutils i386 1:3.3-1 [202 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main dpkg i386 1.17.1ubuntu1 [1999 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main findutils i386 4.4.2-6ubuntu2 [236 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main grep i386 2.15-1 [157 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main libdb5.3 i386 5.3.28-3 [795 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main perl i386 5.18.1-4build1 [3735 kB] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main perl-base i386 5.18.1-4build1 [1544 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main perl-modules all 5.18.1-4build1 [3921 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main bzip2 i386 1.0.6-5 [37.4 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main libbz2-1.0 i386 1.0.6-5 [33.9 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main sed i386 4.2.2-2ubuntu1 [141 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main tar i386 1.27-3 [231 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libitm1 i386 4.8.2-5ubuntu3 [28.4 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libgomp1 i386 4.8.2-5ubuntu3 [25.0 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libasan0 i386 4.8.2-5ubuntu3 [64.1 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty-proposed/main gcc-4.8-base i386 4.8.2-5ubuntu3 [14.1 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libgcc1 i386 1:4.8.2-5ubuntu3 [46.4 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libatomic1 i386 4.8.2-5ubuntu3 [8222 B] Get:21 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libquadmath0 i386 4.8.2-5ubuntu3 [186 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main libmpfr4 i386 3.1.2-1 [197 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty-proposed/main cpp-4.8 i386 4.8.2-5ubuntu3 [4443 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main binutils i386 2.23.91.20131123-1ubuntu1 [2116 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libstdc++-4.8-dev i386 4.8.2-5ubuntu3 [1057 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty-proposed/main g++-4.8 i386 4.8.2-5ubuntu3 [6982 kB] Get:27 http://ftpmaster.internal/ubuntu/ trusty-proposed/main gcc-4.8 i386 4.8.2-5ubuntu3 [4861 kB] Get:28 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libgcc-4.8-dev i386 4.8.2-5ubuntu3 [1736 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libstdc++6 i386 4.8.2-5ubuntu3 [262 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libgmp10 i386 2:5.1.2+dfsg-3ubuntu2 [227 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/main libcloog-isl4 i386 0.18.1-3 [57.4 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main libisl10 i386 0.12.1-2 [429 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main libmpc3 i386 1.0.1-1ubuntu1 [38.0 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty/main libapt-pkg4.12 i386 0.9.13~exp1ubuntu3 [625 kB] Get:35 http://ftpmaster.internal/ubuntu/ trusty/main libusb-0.1-4 i386 2:0.1.12-23.3 [15.3 kB] Get:36 http://ftpmaster.internal/ubuntu/ trusty/main gpgv i386 1.4.15-1.1ubuntu1 [177 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty/main gnupg i386 1.4.15-1.1ubuntu1 [762 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main apt i386 0.9.13~exp1ubuntu3 [951 kB] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main base-passwd i386 3.5.28 [39.1 kB] Get:40 http://ftpmaster.internal/ubuntu/ trusty/main debconf all 1.5.51ubuntu1 [148 kB] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main libpam0g i386 1.1.3-10ubuntu1 [61.0 kB] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main libselinux1 i386 2.2.1-1ubuntu1 [66.3 kB] Get:43 http://ftpmaster.internal/ubuntu/ trusty/main libpam-modules-bin i386 1.1.3-10ubuntu1 [37.4 kB] Get:44 http://ftpmaster.internal/ubuntu/ trusty/main libpam-modules i386 1.1.3-10ubuntu1 [274 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main libsemanage-common all 2.2-1 [6488 B] Get:46 http://ftpmaster.internal/ubuntu/ trusty/main libsemanage1 i386 2.2-1 [84.2 kB] Get:47 http://ftpmaster.internal/ubuntu/ trusty/main libsepol1 i386 2.2-1 [118 kB] Get:48 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libffi6 i386 3.0.13-8 [14.2 kB] Get:49 http://ftpmaster.internal/ubuntu/ trusty/main libp11-kit0 i386 0.20.1-2ubuntu1 [90.1 kB] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main libsqlite3-0 i386 3.8.1-1ubuntu1 [391 kB] Get:51 http://ftpmaster.internal/ubuntu/ trusty/main libdbus-1-3 i386 1.6.18-0ubuntu2 [131 kB] Get:52 http://ftpmaster.internal/ubuntu/ trusty/main libdrm2 i386 2.4.49-1 [23.5 kB] Get:53 http://ftpmaster.internal/ubuntu/ trusty/main libjson-c2 i386 0.11-3ubuntu1 [24.3 kB] Get:54 http://ftpmaster.internal/ubuntu/ trusty/main libkmod2 i386 15-0ubuntu2 [46.6 kB] Get:55 http://ftpmaster.internal/ubuntu/ trusty/main libnih-dbus1 i386 1.0.3-4ubuntu24 [16.0 kB] Get:56 http://ftpmaster.internal/ubuntu/ trusty/main libnih1 i386 1.0.3-4ubuntu24 [54.1 kB] Get:57 http://ftpmaster.internal/ubuntu/ trusty/main udev i386 204-5ubuntu6 [1045 kB] Get:58 http://ftpmaster.internal/ubuntu/ trusty/main libudev1 i386 204-5ubuntu6 [42.5 kB] Get:59 http://ftpmaster.internal/ubuntu/ trusty/main libprocps1 i386 1:3.3.8-2ubuntu1 [34.2 kB] Get:60 http://ftpmaster.internal/ubuntu/ trusty/main procps i386 1:3.3.8-2ubuntu1 [241 kB] Get:61 http://ftpmaster.internal/ubuntu/ trusty/main initramfs-tools all 0.103ubuntu2 [49.2 kB] Get:62 http://ftpmaster.internal/ubuntu/ trusty/main initramfs-tools-bin i386 0.103ubuntu2 [9796 B] Get:63 http://ftpmaster.internal/ubuntu/ trusty/main busybox-initramfs i386 1:1.21.0-1ubuntu1 [172 kB] Get:64 http://ftpmaster.internal/ubuntu/ trusty/main kmod i386 15-0ubuntu2 [96.1 kB] Get:65 http://ftpmaster.internal/ubuntu/ trusty/main module-init-tools all 15-0ubuntu2 [1874 B] Get:66 http://ftpmaster.internal/ubuntu/ trusty/main plymouth i386 0.8.8-0ubuntu9 [98.0 kB] Get:67 http://ftpmaster.internal/ubuntu/ trusty/main libpng12-0 i386 1.2.49-5ubuntu1 [130 kB] Get:68 http://ftpmaster.internal/ubuntu/ trusty/main libplymouth2 i386 0.8.8-0ubuntu9 [76.4 kB] Get:69 http://ftpmaster.internal/ubuntu/ trusty/main libroken18-heimdal i386 1.6~git20120403+dfsg1-3ubuntu0.2 [46.3 kB] Get:70 http://ftpmaster.internal/ubuntu/ trusty/main libasn1-8-heimdal i386 1.6~git20120403+dfsg1-3ubuntu0.2 [227 kB] Get:71 http://ftpmaster.internal/ubuntu/ trusty/main libkeyutils1 i386 1.5.6-1 [7266 B] Get:72 http://ftpmaster.internal/ubuntu/ trusty/main libk5crypto3 i386 1.11.3+dfsg-3ubuntu2 [99.2 kB] Get:73 http://ftpmaster.internal/ubuntu/ trusty/main libgssapi-krb5-2 i386 1.11.3+dfsg-3ubuntu2 [132 kB] Get:74 http://ftpmaster.internal/ubuntu/ trusty/main libkrb5-3 i386 1.11.3+dfsg-3ubuntu2 [349 kB] Get:75 http://ftpmaster.internal/ubuntu/ trusty/main libkrb5support0 i386 1.11.3+dfsg-3ubuntu2 [33.7 kB] Get:76 http://ftpmaster.internal/ubuntu/ trusty/main libhcrypto4-heimdal i386 1.6~git20120403+dfsg1-3ubuntu0.2 [102 kB] Get:77 http://ftpmaster.internal/ubuntu/ trusty/main libheimbase1-heimdal i386 1.6~git20120403+dfsg1-3ubuntu0.2 [32.2 kB] Get:78 http://ftpmaster.internal/ubuntu/ trusty/main libwind0-heimdal i386 1.6~git20120403+dfsg1-3ubuntu0.2 [77.3 kB] Get:79 http://ftpmaster.internal/ubuntu/ trusty/main libhx509-5-heimdal i386 1.6~git20120403+dfsg1-3ubuntu0.2 [123 kB] Get:80 http://ftpmaster.internal/ubuntu/ trusty/main libkrb5-26-heimdal i386 1.6~git20120403+dfsg1-3ubuntu0.2 [230 kB] Get:81 http://ftpmaster.internal/ubuntu/ trusty/main libheimntlm0-heimdal i386 1.6~git20120403+dfsg1-3ubuntu0.2 [16.2 kB] Get:82 http://ftpmaster.internal/ubuntu/ trusty/main libgssapi3-heimdal i386 1.6~git20120403+dfsg1-3ubuntu0.2 [107 kB] Get:83 http://ftpmaster.internal/ubuntu/ trusty/main libsasl2-modules-db i386 2.1.25.dfsg1-17build1 [14.7 kB] Get:84 http://ftpmaster.internal/ubuntu/ trusty/main libsasl2-2 i386 2.1.25.dfsg1-17build1 [55.0 kB] Get:85 http://ftpmaster.internal/ubuntu/ trusty/main libldap-2.4-2 i386 2.4.31-1+nmu2ubuntu5 [182 kB] Get:86 http://ftpmaster.internal/ubuntu/ trusty/main libcurl3-gnutls i386 7.33.0-1ubuntu1 [192 kB] Get:87 http://ftpmaster.internal/ubuntu/ trusty/main libpam-runtime all 1.1.3-10ubuntu1 [40.9 kB] Get:88 http://ftpmaster.internal/ubuntu/ trusty/main adduser all 3.113+nmu3ubuntu3 [169 kB] Get:89 http://ftpmaster.internal/ubuntu/ trusty/main iproute2 i386 3.12.0-1 [394 kB] Get:90 http://ftpmaster.internal/ubuntu/ trusty/main ifupdown i386 0.7.46.1ubuntu1 [57.2 kB] Get:91 http://ftpmaster.internal/ubuntu/ trusty/main libjson0 i386 0.11-3ubuntu1 [1010 B] Get:92 http://ftpmaster.internal/ubuntu/ trusty/main upstart i386 1.11-0ubuntu1 [579 kB] Get:93 http://ftpmaster.internal/ubuntu/ trusty/main apt-transport-https i386 0.9.13~exp1ubuntu3 [24.9 kB] Get:94 http://ftpmaster.internal/ubuntu/ trusty/main libsasl2-modules i386 2.1.25.dfsg1-17build1 [59.3 kB] Get:95 http://ftpmaster.internal/ubuntu/ trusty/main advancecomp i386 1.18-1 [151 kB] Get:96 http://ftpmaster.internal/ubuntu/ trusty/main dpkg-dev all 1.17.1ubuntu1 [726 kB] Get:97 http://ftpmaster.internal/ubuntu/ trusty/main libdpkg-perl all 1.17.1ubuntu1 [195 kB] Get:98 http://ftpmaster.internal/ubuntu/ trusty/main patch i386 2.7.1-4 [99.2 kB] Get:99 http://ftpmaster.internal/ubuntu/ trusty-proposed/main build-essential i386 11.6ubuntu6 [4824 B] Get:100 http://ftpmaster.internal/ubuntu/ trusty/main iproute all 1:3.12.0-1 [2384 B] Get:101 http://ftpmaster.internal/ubuntu/ trusty/main linux-libc-dev i386 3.12.0-4.10 [729 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 49.7 MB in 5s (9067 kB/s) (Reading database ... 12107 files and directories currently installed.) Preparing to replace base-files 6.12ubuntu4 (using .../base-files_6.12ubuntu5_i386.deb) ... Unpacking replacement base-files ... Setting up base-files (6.12ubuntu5) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Installing new version of config file /etc/os-release ... (Reading database ... 12107 files and directories currently installed.) Preparing to replace coreutils 8.20-3ubuntu5 (using .../coreutils_8.21-1ubuntu3_i386.deb) ... Unpacking replacement coreutils ... Setting up coreutils (8.21-1ubuntu3) ... (Reading database ... 12109 files and directories currently installed.) Preparing to replace diffutils 1:3.2-8 (using .../diffutils_1%3a3.3-1_i386.deb) ... Unpacking replacement diffutils ... Setting up diffutils (1:3.3-1) ... (Reading database ... 12109 files and directories currently installed.) Preparing to replace dpkg 1.16.12ubuntu1 (using .../dpkg_1.17.1ubuntu1_i386.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.17.1ubuntu1) ... (Reading database ... 12092 files and directories currently installed.) Preparing to replace findutils 4.4.2-6ubuntu1 (using .../findutils_4.4.2-6ubuntu2_i386.deb) ... Unpacking replacement findutils ... Setting up findutils (4.4.2-6ubuntu2) ... (Reading database ... 12092 files and directories currently installed.) Preparing to replace grep 2.14-3 (using .../archives/grep_2.15-1_i386.deb) ... Unpacking replacement grep ... Setting up grep (2.15-1) ... Selecting previously unselected package libdb5.3:i386. (Reading database ... 12092 files and directories currently installed.) Unpacking libdb5.3:i386 (from .../libdb5.3_5.3.28-3_i386.deb) ... Setting up libdb5.3:i386 (5.3.28-3) ... Processing triggers for libc-bin ... (Reading database ... 12098 files and directories currently installed.) 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Setting up initramfs-tools (0.103ubuntu2) ... update-initramfs: deferring update (trigger activated) Setting up libpng12-0:i386 (1.2.49-5ubuntu1) ... Setting up libplymouth2:i386 (0.8.8-0ubuntu9) ... Setting up plymouth (0.8.8-0ubuntu9) ... Installing new version of config file /etc/init/plymouth-stop.conf ... update-initramfs: deferring update (trigger activated) Setting up libroken18-heimdal:i386 (1.6~git20120403+dfsg1-3ubuntu0.2) ... Setting up libasn1-8-heimdal:i386 (1.6~git20120403+dfsg1-3ubuntu0.2) ... Setting up libkeyutils1:i386 (1.5.6-1) ... Setting up libkrb5support0:i386 (1.11.3+dfsg-3ubuntu2) ... Setting up libk5crypto3:i386 (1.11.3+dfsg-3ubuntu2) ... Setting up libkrb5-3:i386 (1.11.3+dfsg-3ubuntu2) ... Setting up libgssapi-krb5-2:i386 (1.11.3+dfsg-3ubuntu2) ... Setting up libhcrypto4-heimdal:i386 (1.6~git20120403+dfsg1-3ubuntu0.2) ... Setting up libheimbase1-heimdal:i386 (1.6~git20120403+dfsg1-3ubuntu0.2) ... Setting up libwind0-heimdal:i386 (1.6~git20120403+dfsg1-3ubuntu0.2) ... Setting up libhx509-5-heimdal:i386 (1.6~git20120403+dfsg1-3ubuntu0.2) ... Setting up libkrb5-26-heimdal:i386 (1.6~git20120403+dfsg1-3ubuntu0.2) ... Setting up libheimntlm0-heimdal:i386 (1.6~git20120403+dfsg1-3ubuntu0.2) ... Setting up libgssapi3-heimdal:i386 (1.6~git20120403+dfsg1-3ubuntu0.2) ... Setting up libsasl2-modules-db:i386 (2.1.25.dfsg1-17build1) ... Setting up libsasl2-2:i386 (2.1.25.dfsg1-17build1) ... Setting up libldap-2.4-2:i386 (2.4.31-1+nmu2ubuntu5) ... Setting up libcurl3-gnutls:i386 (7.33.0-1ubuntu1) ... Setting up adduser (3.113+nmu3ubuntu3) ... Setting up iproute2 (3.12.0-1) ... Setting up ifupdown (0.7.46.1ubuntu1) ... Installing new version of config file /etc/init.d/networking ... Setting up libjson0:i386 (0.11-3ubuntu1) ... Setting up upstart (1.11-0ubuntu1) ... Setting up apt-transport-https (0.9.13~exp1ubuntu3) ... Setting up libsasl2-modules:i386 (2.1.25.dfsg1-17build1) ... Setting up advancecomp (1.18-1) ... Setting up patch (2.7.1-4) ... Setting up iproute (1:3.12.0-1) ... Setting up linux-libc-dev:i386 (3.12.0-4.10) ... Setting up perl-modules (5.18.1-4build1) ... Setting up perl (5.18.1-4build1) ... Setting up libdpkg-perl (1.17.1ubuntu1) ... Setting up dpkg-dev (1.17.1ubuntu1) ... Setting up build-essential (11.6ubuntu6) ... Processing triggers for libc-bin ... Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-5271710', 'i386', 'trusty', '--nolog', '--batch', '--archive=ubuntu', '--dist=trusty', '-A', '--purpose=PPA', '--architecture=i386', '--comp=main', 'avogadro_1.1.0-4ubuntu1~ppa1.dsc'] Initiating build PACKAGEBUILD-5271710 with 1 jobs across 1 processor cores. Kernel reported to sbuild: 2.6.24-32-xen #1 SMP Mon Dec 3 16:12:25 UTC 2012 i686 Automatic build of avogadro_1.1.0-4ubuntu1~ppa1 on wani03 by sbuild/i386 1.170.5 Build started at 20131126-1852 ****************************************************************************** avogadro_1.1.0-4ubuntu1~ppa1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: cmake (>> 2.6.0), debhelper (>> 7.0.50~), libboost-python-dev, libeigen2-dev (>> 2.0~beta6), libgl2ps-dev, libglew-dev, libopenbabel-dev (>> 2.2.0), libqt4-dev (>> 4.5.0), libqt4-opengl-dev, pkg-config, python (>> 2.6.6-3~), python-dev, python-numpy (>> 1:1.4.1-4~), python-sip-dev, qt4-dev-tools, zlib1g-dev Checking for already installed source dependencies... cmake: missing debhelper: missing libboost-python-dev: missing libeigen2-dev: missing libgl2ps-dev: missing libglew-dev: missing libopenbabel-dev: missing libqt4-dev: missing libqt4-opengl-dev: missing pkg-config: missing python: missing python-dev: missing python-numpy: missing python-sip-dev: missing qt4-dev-tools: missing zlib1g-dev: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install cmake debhelper libboost-python-dev libeigen2-dev libgl2ps-dev libglew-dev libopenbabel-dev libqt4-dev libqt4-opengl-dev pkg-config python python-dev python-numpy python-sip-dev qt4-dev-tools zlib1g-dev Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libprocps0 Use 'apt-get autoremove' to remove it. The following extra packages will be installed: apparmor-easyprof bsdmainutils cmake-data dh-apparmor dh-python emacsen-common file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base intltool-debian libarchive13 libasprintf0c2 libaudio2 libblas3 libboost-python1.54-dev libboost-python1.54.0 libboost1.54-dev libcairo2 libcroco3 libdrm-dev libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libexpat1 libexpat1-dev libfontconfig1 libfreetype6 libgfortran3 libgl1-mesa-dev libgl1-mesa-glx libgl2ps0 libglapi-mesa libglew1.8 libglib2.0-0 libglu1-mesa libglu1-mesa-dev libice6 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 liblcms1 liblzo2-2 libmagic1 libmng1 libnettle4 libopenbabel4 libpciaccess0 libpipeline1 libpixman-1-0 libpopt0 libpthread-stubs0-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-sql-sqlite libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtgui4 libsm6 libtiff5 libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-glx0 libxcb-glx0-dev libxcb-render0 libxcb-shm0 libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxi6 libxml2 libxrender1 libxt6 libxtst6 libxxf86vm-dev libxxf86vm1 man-db mesa-common-dev mime-support po-debconf python-minimal python-sip python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal qt4-default qt4-linguist-tools qt4-qmake qtchooser sip-dev ttf-dejavu-core ucf x11-common x11proto-core-dev x11proto-damage-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev x11proto-input-dev x11proto-kb-dev x11proto-xext-dev x11proto-xf86vidmode-dev xorg-sgml-doctools xtrans-dev Suggested packages: wamerican wordlist whois vacation codeblocks eclipse dh-make gettext-doc groff lrzip nas libboost1.54-doc libboost-atomic1.54-dev libboost-chrono1.54-dev libboost-context1.54-dev libboost-coroutine.54-dev libboost-date-time1.54-dev libboost-exception1.54-dev libboost-filesystem1.54-dev libboost-graph1.54-dev libboost-graph-parallel1.54-dev libboost-iostreams1.54-dev libboost-locale1.54-dev libboost-log.54-dev libboost-math1.54-dev libboost-mpi1.54-dev libboost-mpi-python1.54-dev libboost-program-options1.54-dev libboost-random1.54-dev libboost-regex1.54-dev libboost-serialization1.54-dev libboost-signals1.54-dev libboost-system1.54-dev libboost-test1.54-dev libboost-thread1.54-dev libboost-timer1.54-dev libboost-wave1.54-dev libbost1.54-tools-dev libeigen2-doc glew-utils liblcms-utils libopenbabel-doc pciutils libqt4-declarative-folderlistmodel libqt4-declarative-gestures libqt4-declarative-particles libqt4-declarative-shaders qt4-qmlviewer libmysqlclient-dev libpq-dev libsqlite3-dev qt4-doc unixodbc-dev libthai0 libicu48 qt4-qtconfig libxcb-doc libxext-doc less www-browser libmail-box-perl python-doc python-tk python-numpy-doc python-numpy-dbg python-nose gfortran python-sip-doc python2.7-doc binfmt-support python3-doc python3-tk python3.3-doc qt4-doc-html qt5-default Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev gccxml libgl1-mesa-dri libglib2.0-data shared-mime-info qdbus libqtwebkit-dev libcups2 libx11-doc xml-core libmail-sendmail-perl qt4-designer The following NEW packages will be installed: apparmor-easyprof bsdmainutils cmake cmake-data debhelper dh-apparmor dh-python emacsen-common file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base intltool-debian libarchive13 libasprintf0c2 libaudio2 libblas3 libboost-python-dev libboost-python1.54-dev libboost-python1.54.0 libboost1.54-dev libcairo2 libcroco3 libdrm-dev libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libeigen2-dev libexpat1 libexpat1-dev libfontconfig1 libfreetype6 libgfortran3 libgl1-mesa-dev libgl1-mesa-glx libgl2ps-dev libgl2ps0 libglapi-mesa libglew-dev libglew1.8 libglib2.0-0 libglu1-mesa libglu1-mesa-dev libice6 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 liblcms1 liblzo2-2 libmagic1 libmng1 libnettle4 libopenbabel-dev libopenbabel4 libpciaccess0 libpipeline1 libpixman-1-0 libpopt0 libpthread-stubs0-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl libqt4-opengl-dev libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-sql-sqlite libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtgui4 libsm6 libtiff5 libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-glx0 libxcb-glx0-dev libxcb-render0 libxcb-shm0 libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxi6 libxml2 libxrender1 libxt6 libxtst6 libxxf86vm-dev libxxf86vm1 man-db mesa-common-dev mime-support pkg-config po-debconf python python-dev python-minimal python-numpy python-sip python-sip-dev python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal qt4-default qt4-dev-tools qt4-linguist-tools qt4-qmake qtchooser sip-dev ttf-dejavu-core ucf x11-common x11proto-core-dev x11proto-damage-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev x11proto-input-dev x11proto-kb-dev x11proto-xext-dev x11proto-xf86vidmode-dev xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 164 newly installed, 0 to remove and 0 not upgraded. Need to get 88.6 MB of archives. After this operation, 357 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1 i386 2.1.0-4 [127 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main libmagic1 i386 5.11-2ubuntu4 [172 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main libpopt0 i386 1.16-8 [29.0 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libpython3.3-minimal i386 3.3.3-2 [394 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main mime-support all 3.54ubuntu1 [31.7 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libpython3.3-stdlib i386 3.3.3-2 [2032 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty-proposed/main python3.3-minimal i386 3.3.3-2 [1311 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main libasprintf0c2 i386 0.18.3.1-1ubuntu1 [7120 B] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main libglib2.0-0 i386 2.38.1-1 [988 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main libpipeline1 i386 1.2.4-1 [26.5 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main libxau6 i386 1:1.0.8-1 [8352 B] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main libxdmcp6 i386 1:1.1.1-1 [13.1 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main libxcb1 i386 1.9.1-3ubuntu1 [48.2 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main libx11-data all 2:1.6.2-1ubuntu1 [180 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main libx11-6 i386 2:1.6.2-1ubuntu1 [763 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main libxext6 i386 2:1.3.2-1 [33.9 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libxml2 i386 2.9.1+dfsg1-3ubuntu2 [672 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main groff-base i386 1.22.2-3 [705 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main bsdmainutils i386 9.0.5ubuntu1 [197 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main man-db i386 2.6.5-2 [704 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main liblzo2-2 i386 2.06-1.2 [59.0 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main libnettle4 i386 2.7.1-1 [125 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2.33+svn2514-3ubuntu1 [2964 B] Get:34 http://ftpmaster.internal/ubuntu/ trusty/main fontconfig-config all 2.11.0-0ubuntu1 [51.7 kB] Get:35 http://ftpmaster.internal/ubuntu/ trusty/main libfontconfig1 i386 2.11.0-0ubuntu1 [143 kB] Get:36 http://ftpmaster.internal/ubuntu/ trusty/main libpixman-1-0 i386 0.30.2-2 [216 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty/main libxcb-render0 i386 1.9.1-3ubuntu1 [14.2 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main libxcb-shm0 i386 1.9.1-3ubuntu1 [5764 B] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main libxrender1 i386 1:0.9.8-1 [20.3 kB] Get:40 http://ftpmaster.internal/ubuntu/ trusty/main libcairo2 i386 1.12.16-0ubuntu2 [649 kB] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main libcroco3 i386 0.6.8-2 [81.2 kB] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main libpciaccess0 i386 0.13.2-1 [21.9 kB] Get:43 http://ftpmaster.internal/ubuntu/ trusty/main libdrm-intel1 i386 2.4.49-1 [53.9 kB] Get:44 http://ftpmaster.internal/ubuntu/ trusty/main libdrm-nouveau2 i386 2.4.49-1 [14.2 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main libdrm-radeon1 i386 2.4.49-1 [24.8 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libgfortran3 i386 4.8.2-5ubuntu3 [225 kB] Get:47 http://ftpmaster.internal/ubuntu/ trusty/main libglapi-mesa i386 9.2.2-1ubuntu1 [20.8 kB] Get:48 http://ftpmaster.internal/ubuntu/ trusty/main libx11-xcb1 i386 2:1.6.2-1ubuntu1 [10.8 kB] Get:49 http://ftpmaster.internal/ubuntu/ trusty/main libxcb-dri2-0 i386 1.9.1-3ubuntu1 [8140 B] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main libxcb-glx0 i386 1.9.1-3ubuntu1 [28.3 kB] Get:51 http://ftpmaster.internal/ubuntu/ trusty/main libxdamage1 i386 1:1.1.4-1ubuntu1 [7406 B] Get:52 http://ftpmaster.internal/ubuntu/ trusty/main libxfixes3 i386 1:5.0.1-1ubuntu1 [11.5 kB] Get:53 http://ftpmaster.internal/ubuntu/ trusty/main libxxf86vm1 i386 1:1.1.3-1 [11.8 kB] Get:54 http://ftpmaster.internal/ubuntu/ trusty/main libgl1-mesa-glx i386 9.2.2-1ubuntu1 [102 kB] Get:55 http://ftpmaster.internal/ubuntu/ trusty/main libglew1.8 i386 1.9.0.is.1.8.0-0ubuntu2 [149 kB] Get:56 http://ftpmaster.internal/ubuntu/ trusty/main libjpeg-turbo8 i386 1.3.0-0ubuntu1 [128 kB] Get:57 http://ftpmaster.internal/ubuntu/ trusty/main liblcms1 i386 1.19.dfsg-1.2ubuntu3 [108 kB] Get:58 http://ftpmaster.internal/ubuntu/ trusty/main libjpeg8 i386 8c-2ubuntu8 [2188 B] Get:59 http://ftpmaster.internal/ubuntu/ trusty/main libmng1 i386 1.0.10-3build1 [218 kB] Get:60 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-minimal i386 2.7.6-2 [307 kB] Get:61 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-stdlib i386 2.7.6-2 [1840 kB] Get:62 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7 i386 2.7.6-2 [978 kB] Get:63 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1-dev i386 2.1.0-4 [204 kB] Get:64 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-dev i386 2.7.6-2 [21.8 MB] Get:65 http://ftpmaster.internal/ubuntu/ trusty/main libqtcore4 i386 4:4.8.4+dfsg-0ubuntu19 [2093 kB] Get:66 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-xml i386 4:4.8.4+dfsg-0ubuntu19 [93.6 kB] Get:67 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-dbus i386 4:4.8.4+dfsg-0ubuntu19 [181 kB] Get:68 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-network i386 4:4.8.4+dfsg-0ubuntu19 [548 kB] Get:69 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-script i386 4:4.8.4+dfsg-0ubuntu19 [794 kB] Get:70 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-sql i386 4:4.8.4+dfsg-0ubuntu19 [98.3 kB] Get:71 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-xmlpatterns i386 4:4.8.4+dfsg-0ubuntu19 [1022 kB] Get:72 http://ftpmaster.internal/ubuntu/ trusty/main fontconfig i386 2.11.0-0ubuntu1 [181 kB] Get:73 http://ftpmaster.internal/ubuntu/ trusty/main libjbig0 i386 2.0-2ubuntu1 [28.0 kB] Get:74 http://ftpmaster.internal/ubuntu/ trusty/main libtiff5 i386 4.0.3-5ubuntu1 [169 kB] Get:75 http://ftpmaster.internal/ubuntu/ trusty/main libxi6 i386 2:1.7.1.901-1ubuntu1 [32.0 kB] Get:76 http://ftpmaster.internal/ubuntu/ trusty/main libqtgui4 i386 4:4.8.4+dfsg-0ubuntu19 [4082 kB] Get:77 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-declarative i386 4:4.8.4+dfsg-0ubuntu19 [1079 kB] Get:78 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-designer i386 4:4.8.4+dfsg-0ubuntu19 [3615 kB] Get:79 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-help i386 4:4.8.4+dfsg-0ubuntu19 [205 kB] Get:80 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-opengl i386 4:4.8.4+dfsg-0ubuntu19 [300 kB] Get:81 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-qt3support i386 4:4.8.4+dfsg-0ubuntu19 [1041 kB] Get:82 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-scripttools i386 4:4.8.4+dfsg-0ubuntu19 [225 kB] Get:83 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-sql-sqlite i386 4:4.8.4+dfsg-0ubuntu19 [23.6 kB] Get:84 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-svg i386 4:4.8.4+dfsg-0ubuntu19 [137 kB] Get:85 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-test i386 4:4.8.4+dfsg-0ubuntu19 [60.4 kB] Get:86 http://ftpmaster.internal/ubuntu/ trusty/main libunistring0 i386 0.9.3-5ubuntu1 [429 kB] Get:87 http://ftpmaster.internal/ubuntu/ trusty/main libxtst6 i386 2:1.2.2-1 [13.8 kB] Get:88 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-minimal i386 2.7.6-2 [1122 kB] Get:89 http://ftpmaster.internal/ubuntu/ trusty/main libglu1-mesa i386 9.0.0-2 [195 kB] Get:90 http://ftpmaster.internal/ubuntu/ trusty-proposed/main python3.3 i386 3.3.3-2 [128 kB] Get:91 http://ftpmaster.internal/ubuntu/ trusty-proposed/main python3-minimal i386 3.3.2-17 [26.1 kB] Get:92 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libpython3-stdlib i386 3.3.2-17 [7862 B] Get:93 http://ftpmaster.internal/ubuntu/ trusty-proposed/main python3 i386 3.3.2-17 [9156 B] Get:94 http://ftpmaster.internal/ubuntu/ trusty-proposed/main dh-python all 1.20131021-1ubuntu2 [60.9 kB] Get:95 http://ftpmaster.internal/ubuntu/ trusty/main file i386 5.11-2ubuntu4 [18.0 kB] Get:96 http://ftpmaster.internal/ubuntu/ trusty/main gettext-base i386 0.18.3.1-1ubuntu1 [55.2 kB] Get:97 http://ftpmaster.internal/ubuntu/ trusty/main emacsen-common all 2.0.5 [17.3 kB] Get:98 http://ftpmaster.internal/ubuntu/ trusty/main cmake-data all 2.8.12.1-0ubuntu1 [674 kB] Get:99 http://ftpmaster.internal/ubuntu/ trusty/main cmake i386 2.8.12.1-0ubuntu1 [2629 kB] Get:100 http://ftpmaster.internal/ubuntu/ trusty/main gettext i386 0.18.3.1-1ubuntu1 [1007 kB] Get:101 http://ftpmaster.internal/ubuntu/ trusty/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:102 http://ftpmaster.internal/ubuntu/ trusty/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:103 http://ftpmaster.internal/ubuntu/ trusty/main apparmor-easyprof all 2.8.0-0ubuntu34 [23.3 kB] Get:104 http://ftpmaster.internal/ubuntu/ trusty/main dh-apparmor all 2.8.0-0ubuntu34 [7772 B] Get:105 http://ftpmaster.internal/ubuntu/ trusty/main debhelper all 9.20130921ubuntu1 [635 kB] Get:106 http://ftpmaster.internal/ubuntu/ trusty/main libblas3 i386 1.2.20110419-7 [183 kB] Get:107 http://ftpmaster.internal/ubuntu/ trusty/main libboost1.54-dev i386 1.54.0-4~ubuntu4 [5684 kB] Get:108 http://ftpmaster.internal/ubuntu/ trusty/main python2.7 i386 2.7.6-2 [190 kB] Get:109 http://ftpmaster.internal/ubuntu/ trusty/main python-minimal i386 2.7.5-5ubuntu1 [31.0 kB] Get:110 http://ftpmaster.internal/ubuntu/ trusty/main libpython-stdlib i386 2.7.5-5ubuntu1 [7770 B] Get:111 http://ftpmaster.internal/ubuntu/ trusty/main python i386 2.7.5-5ubuntu1 [168 kB] Get:112 http://ftpmaster.internal/ubuntu/ trusty/main libpython-dev i386 2.7.5-5ubuntu1 [7870 B] Get:113 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-dev i386 2.7.6-2 [285 kB] Get:114 http://ftpmaster.internal/ubuntu/ trusty/main python-dev i386 2.7.5-5ubuntu1 [1128 B] Get:115 http://ftpmaster.internal/ubuntu/ trusty/main libboost-python1.54-dev i386 1.54.0-4~ubuntu4 [145 kB] Get:116 http://ftpmaster.internal/ubuntu/ trusty/main libboost-python-dev i386 1.54.0.1ubuntu1 [3196 B] Get:117 http://ftpmaster.internal/ubuntu/ trusty/main libdrm-dev i386 2.4.49-1 [165 kB] Get:118 http://ftpmaster.internal/ubuntu/ trusty/universe libgl2ps0 i386 1.3.8-1 [37.7 kB] Get:119 http://ftpmaster.internal/ubuntu/ trusty/universe libgl2ps-dev i386 1.3.8-1 [4680 B] Get:120 http://ftpmaster.internal/ubuntu/ trusty/main xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:121 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-core-dev all 7.0.24-1 [748 kB] Get:122 http://ftpmaster.internal/ubuntu/ trusty/main libxau-dev i386 1:1.0.8-1 [10.2 kB] Get:123 http://ftpmaster.internal/ubuntu/ trusty/main libxdmcp-dev i386 1:1.1.1-1 [26.8 kB] Get:124 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-input-dev all 2.3-1 [139 kB] Get:125 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-kb-dev all 1.0.6-2 [269 kB] Get:126 http://ftpmaster.internal/ubuntu/ trusty/main xtrans-dev all 1.3.2-1 [69.9 kB] Get:127 http://ftpmaster.internal/ubuntu/ trusty/main libpthread-stubs0-dev i386 0.3-4 [4054 B] Get:128 http://ftpmaster.internal/ubuntu/ trusty/main libxcb1-dev i386 1.9.1-3ubuntu1 [98.6 kB] Get:129 http://ftpmaster.internal/ubuntu/ trusty/main libx11-dev i386 2:1.6.2-1ubuntu1 [888 kB] Get:130 http://ftpmaster.internal/ubuntu/ trusty/main mesa-common-dev i386 9.2.2-1ubuntu1 [249 kB] Get:131 http://ftpmaster.internal/ubuntu/ trusty/main libx11-xcb-dev i386 2:1.6.2-1ubuntu1 [11.0 kB] Get:132 http://ftpmaster.internal/ubuntu/ trusty/main libxcb-dri2-0-dev i386 1.9.1-3ubuntu1 [10.4 kB] Get:133 http://ftpmaster.internal/ubuntu/ trusty/main libxcb-glx0-dev i386 1.9.1-3ubuntu1 [43.6 kB] Get:134 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-xext-dev all 7.2.1-1 [265 kB] Get:135 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-fixes-dev all 1:5.0-2ubuntu2 [14.2 kB] Get:136 http://ftpmaster.internal/ubuntu/ trusty/main libxfixes-dev i386 1:5.0.1-1ubuntu1 [12.4 kB] Get:137 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-damage-dev all 1:1.2.1-2 [8286 B] Get:138 http://ftpmaster.internal/ubuntu/ trusty/main libxdamage-dev i386 1:1.1.4-1ubuntu1 [5242 B] Get:139 http://ftpmaster.internal/ubuntu/ trusty/main libxext-dev i386 2:1.3.2-1 [89.9 kB] Get:140 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-xf86vidmode-dev all 2.3.1-2 [6116 B] Get:141 http://ftpmaster.internal/ubuntu/ trusty/main libxxf86vm-dev i386 1:1.1.3-1 [14.3 kB] Get:142 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-dri2-dev all 2.8-2 [12.6 kB] Get:143 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-gl-dev all 1.4.16-2 [22.0 kB] Get:144 http://ftpmaster.internal/ubuntu/ trusty/main libgl1-mesa-dev i386 9.2.2-1ubuntu1 [5188 B] Get:145 http://ftpmaster.internal/ubuntu/ trusty/main libglu1-mesa-dev i386 9.0.0-2 [248 kB] Get:146 http://ftpmaster.internal/ubuntu/ trusty/main libglew-dev i386 1.9.0.is.1.8.0-0ubuntu2 [141 kB] Get:147 http://ftpmaster.internal/ubuntu/ trusty/main liblapack3 i386 3.5.0-2 [1497 kB] Get:148 http://ftpmaster.internal/ubuntu/ trusty/universe libopenbabel4 i386 2.3.2+dfsg-1build1 [3866 kB] Get:149 http://ftpmaster.internal/ubuntu/ trusty/universe libopenbabel-dev i386 2.3.2+dfsg-1build1 [195 kB] Get:150 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-dev-bin i386 4:4.8.4+dfsg-0ubuntu19 [1597 kB] Get:151 http://ftpmaster.internal/ubuntu/ trusty/main qt4-linguist-tools i386 4:4.8.4+dfsg-0ubuntu19 [823 kB] Get:152 http://ftpmaster.internal/ubuntu/ trusty/main qt4-qmake i386 4:4.8.4+dfsg-0ubuntu19 [1211 kB] Get:153 http://ftpmaster.internal/ubuntu/ trusty/main qtchooser i386 26-3ubuntu2 [19.1 kB] Get:154 http://ftpmaster.internal/ubuntu/ trusty/main qt4-default all 4:4.8.4+dfsg-0ubuntu19 [7638 B] Get:155 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-dev i386 4:4.8.4+dfsg-0ubuntu19 [916 kB] Get:156 http://ftpmaster.internal/ubuntu/ trusty/main libqt4-opengl-dev i386 4:4.8.4+dfsg-0ubuntu19 [23.0 kB] Get:157 http://ftpmaster.internal/ubuntu/ trusty/main pkg-config i386 0.26-1ubuntu4 [40.5 kB] Get:158 http://ftpmaster.internal/ubuntu/ trusty/main python-numpy i386 1:1.7.1-1ubuntu1 [2017 kB] Get:159 http://ftpmaster.internal/ubuntu/ trusty/main python-sip i386 4.15.2-1ubuntu1 [78.0 kB] Get:160 http://ftpmaster.internal/ubuntu/ trusty/main sip-dev i386 4.15.2-1ubuntu1 [144 kB] Get:161 http://ftpmaster.internal/ubuntu/ trusty/main python-sip-dev i386 4.15.2-1ubuntu1 [21.8 kB] Get:162 http://ftpmaster.internal/ubuntu/ trusty/main qt4-dev-tools i386 4:4.8.4+dfsg-0ubuntu19 [3846 kB] Get:163 http://ftpmaster.internal/ubuntu/ trusty/main zlib1g-dev i386 1:1.2.8.dfsg-1ubuntu1 [181 kB] Get:164 http://ftpmaster.internal/ubuntu/ trusty/universe libeigen2-dev i386 2.0.17-1 [212 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 88.6 MB in 6s (14.3 MB/s) 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Unpacking libunistring0:i386 (from .../libunistring0_0.9.3-5ubuntu1_i386.deb) ... Selecting previously unselected package libxtst6:i386. Unpacking libxtst6:i386 (from .../libxtst6_2%3a1.2.2-1_i386.deb) ... Selecting previously unselected package python2.7-minimal. Unpacking python2.7-minimal (from .../python2.7-minimal_2.7.6-2_i386.deb) ... Selecting previously unselected package libglu1-mesa:i386. Unpacking libglu1-mesa:i386 (from .../libglu1-mesa_9.0.0-2_i386.deb) ... Selecting previously unselected package python3.3. Unpacking python3.3 (from .../python3.3_3.3.3-2_i386.deb) ... Selecting previously unselected package python3-minimal. Unpacking python3-minimal (from .../python3-minimal_3.3.2-17_i386.deb) ... Selecting previously unselected package libpython3-stdlib:i386. Unpacking libpython3-stdlib:i386 (from .../libpython3-stdlib_3.3.2-17_i386.deb) ... Selecting previously unselected package python3. Unpacking python3 (from .../python3_3.3.2-17_i386.deb) ... Selecting previously unselected package dh-python. Unpacking dh-python (from .../dh-python_1.20131021-1ubuntu2_all.deb) ... Selecting previously unselected package file. Unpacking file (from .../file_5.11-2ubuntu4_i386.deb) ... Selecting previously unselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.18.3.1-1ubuntu1_i386.deb) ... Selecting previously unselected package emacsen-common. Unpacking emacsen-common (from .../emacsen-common_2.0.5_all.deb) ... Selecting previously unselected package cmake-data. Unpacking cmake-data (from .../cmake-data_2.8.12.1-0ubuntu1_all.deb) ... Selecting previously unselected package cmake. Unpacking cmake (from .../cmake_2.8.12.1-0ubuntu1_i386.deb) ... Selecting previously unselected package gettext. Unpacking gettext (from .../gettext_0.18.3.1-1ubuntu1_i386.deb) ... Selecting previously unselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously unselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2ubuntu1_all.deb) ... Selecting previously unselected package apparmor-easyprof. Unpacking apparmor-easyprof (from .../apparmor-easyprof_2.8.0-0ubuntu34_all.deb) ... Selecting previously unselected package dh-apparmor. Unpacking dh-apparmor (from .../dh-apparmor_2.8.0-0ubuntu34_all.deb) ... Selecting previously unselected package debhelper. Unpacking debhelper (from .../debhelper_9.20130921ubuntu1_all.deb) ... Selecting previously unselected package libblas3. Unpacking libblas3 (from .../libblas3_1.2.20110419-7_i386.deb) ... Selecting previously unselected package libboost1.54-dev. Unpacking libboost1.54-dev (from .../libboost1.54-dev_1.54.0-4~ubuntu4_i386.deb) ... Selecting previously unselected package python2.7. Unpacking python2.7 (from .../python2.7_2.7.6-2_i386.deb) ... Selecting previously unselected package python-minimal. 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Unpacking libboost-python-dev (from .../libboost-python-dev_1.54.0.1ubuntu1_i386.deb) ... Selecting previously unselected package libdrm-dev:i386. Unpacking libdrm-dev:i386 (from .../libdrm-dev_2.4.49-1_i386.deb) ... Selecting previously unselected package libgl2ps0. Unpacking libgl2ps0 (from .../libgl2ps0_1.3.8-1_i386.deb) ... Selecting previously unselected package libgl2ps-dev. Unpacking libgl2ps-dev (from .../libgl2ps-dev_1.3.8-1_i386.deb) ... Selecting previously unselected package xorg-sgml-doctools. Unpacking xorg-sgml-doctools (from .../xorg-sgml-doctools_1%3a1.11-1_all.deb) ... Selecting previously unselected package x11proto-core-dev. Unpacking x11proto-core-dev (from .../x11proto-core-dev_7.0.24-1_all.deb) ... Selecting previously unselected package libxau-dev:i386. Unpacking libxau-dev:i386 (from .../libxau-dev_1%3a1.0.8-1_i386.deb) ... Selecting previously unselected package libxdmcp-dev:i386. Unpacking libxdmcp-dev:i386 (from .../libxdmcp-dev_1%3a1.1.1-1_i386.deb) ... Selecting previously unselected package x11proto-input-dev. Unpacking x11proto-input-dev (from .../x11proto-input-dev_2.3-1_all.deb) ... Selecting previously unselected package x11proto-kb-dev. Unpacking x11proto-kb-dev (from .../x11proto-kb-dev_1.0.6-2_all.deb) ... Selecting previously unselected package xtrans-dev. Unpacking xtrans-dev (from .../xtrans-dev_1.3.2-1_all.deb) ... Selecting previously unselected package libpthread-stubs0-dev:i386. Unpacking libpthread-stubs0-dev:i386 (from .../libpthread-stubs0-dev_0.3-4_i386.deb) ... Selecting previously unselected package libxcb1-dev:i386. Unpacking libxcb1-dev:i386 (from .../libxcb1-dev_1.9.1-3ubuntu1_i386.deb) ... Selecting previously unselected package libx11-dev:i386. Unpacking libx11-dev:i386 (from .../libx11-dev_2%3a1.6.2-1ubuntu1_i386.deb) ... Selecting previously unselected package mesa-common-dev. Unpacking mesa-common-dev (from .../mesa-common-dev_9.2.2-1ubuntu1_i386.deb) ... Selecting previously unselected package libx11-xcb-dev:i386. Unpacking libx11-xcb-dev:i386 (from .../libx11-xcb-dev_2%3a1.6.2-1ubuntu1_i386.deb) ... Selecting previously unselected package libxcb-dri2-0-dev:i386. Unpacking libxcb-dri2-0-dev:i386 (from .../libxcb-dri2-0-dev_1.9.1-3ubuntu1_i386.deb) ... Selecting previously unselected package libxcb-glx0-dev:i386. Unpacking libxcb-glx0-dev:i386 (from .../libxcb-glx0-dev_1.9.1-3ubuntu1_i386.deb) ... Selecting previously unselected package x11proto-xext-dev. Unpacking x11proto-xext-dev (from .../x11proto-xext-dev_7.2.1-1_all.deb) ... Selecting previously unselected package x11proto-fixes-dev. Unpacking x11proto-fixes-dev (from .../x11proto-fixes-dev_1%3a5.0-2ubuntu2_all.deb) ... Selecting previously unselected package libxfixes-dev:i386. Unpacking libxfixes-dev:i386 (from .../libxfixes-dev_1%3a5.0.1-1ubuntu1_i386.deb) ... Selecting previously unselected package x11proto-damage-dev. 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Unpacking qt4-linguist-tools (from .../qt4-linguist-tools_4%3a4.8.4+dfsg-0ubuntu19_i386.deb) ... Selecting previously unselected package qt4-qmake. Unpacking qt4-qmake (from .../qt4-qmake_4%3a4.8.4+dfsg-0ubuntu19_i386.deb) ... Selecting previously unselected package qtchooser. Unpacking qtchooser (from .../qtchooser_26-3ubuntu2_i386.deb) ... Selecting previously unselected package qt4-default. Unpacking qt4-default (from .../qt4-default_4%3a4.8.4+dfsg-0ubuntu19_all.deb) ... Selecting previously unselected package libqt4-dev. Unpacking libqt4-dev (from .../libqt4-dev_4%3a4.8.4+dfsg-0ubuntu19_i386.deb) ... Selecting previously unselected package libqt4-opengl-dev. Unpacking libqt4-opengl-dev (from .../libqt4-opengl-dev_4%3a4.8.4+dfsg-0ubuntu19_i386.deb) ... Selecting previously unselected package pkg-config. Unpacking pkg-config (from .../pkg-config_0.26-1ubuntu4_i386.deb) ... Selecting previously unselected package python-numpy. Unpacking python-numpy (from .../python-numpy_1%3a1.7.1-1ubuntu1_i386.deb) ... Selecting previously unselected package python-sip. Unpacking python-sip (from .../python-sip_4.15.2-1ubuntu1_i386.deb) ... Selecting previously unselected package sip-dev. Unpacking sip-dev (from .../sip-dev_4.15.2-1ubuntu1_i386.deb) ... Selecting previously unselected package python-sip-dev. Unpacking python-sip-dev (from .../python-sip-dev_4.15.2-1ubuntu1_i386.deb) ... Selecting previously unselected package qt4-dev-tools. Unpacking qt4-dev-tools (from .../qt4-dev-tools_4%3a4.8.4+dfsg-0ubuntu19_i386.deb) ... Selecting previously unselected package zlib1g-dev:i386. Unpacking zlib1g-dev:i386 (from .../zlib1g-dev_1%3a1.2.8.dfsg-1ubuntu1_i386.deb) ... Selecting previously unselected package libeigen2-dev. Unpacking libeigen2-dev (from .../libeigen2-dev_2.0.17-1_i386.deb) ... Setting up libexpat1:i386 (2.1.0-4) ... Setting up libmagic1:i386 (5.11-2ubuntu4) ... Setting up libpopt0:i386 (1.16-8) ... Setting up libpython3.3-minimal:i386 (3.3.3-2) ... Setting up mime-support (3.54ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode Setting up libpython3.3-stdlib:i386 (3.3.3-2) ... Setting up python3.3-minimal (3.3.3-2) ... Setting up libasprintf0c2:i386 (0.18.3.1-1ubuntu1) ... Setting up libglib2.0-0:i386 (2.38.1-1) ... No schema files found: doing nothing. Setting up libpipeline1:i386 (1.2.4-1) ... Setting up libxau6:i386 (1:1.0.8-1) ... Setting up libxdmcp6:i386 (1:1.1.1-1) ... Setting up libxcb1:i386 (1.9.1-3ubuntu1) ... Setting up libx11-data (2:1.6.2-1ubuntu1) ... Setting up libx11-6:i386 (2:1.6.2-1ubuntu1) ... Setting up libxext6:i386 (2:1.3.2-1) ... Setting up libxml2:i386 (2.9.1+dfsg1-3ubuntu2) ... Setting up groff-base (1.22.2-3) ... Setting up bsdmainutils (9.0.5ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.6.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up liblzo2-2:i386 (2.06-1.2) ... Setting up libnettle4:i386 (2.7.1-1) ... Setting up libarchive13:i386 (3.1.2-5ubuntu1) ... Setting up x11-common (1:7.7+1ubuntu6) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6:i386 (2:1.0.8-2) ... Setting up libsm6:i386 (2:1.2.1-2) ... Setting up libxt6:i386 (1:1.1.4-1) ... Setting up libaudio2:i386 (1.9.4-1) ... Setting up libboost-python1.54.0 (1.54.0-4~ubuntu4) ... Setting up libfreetype6:i386 (2.5.0.1-0ubuntu2) ... Setting up ucf (3.0027+nmu1) ... Setting up fonts-dejavu-core (2.33+svn2514-3ubuntu1) ... Setting up ttf-dejavu-core (2.33+svn2514-3ubuntu1) ... Setting up fontconfig-config (2.11.0-0ubuntu1) ... Setting up libfontconfig1:i386 (2.11.0-0ubuntu1) ... Setting up libpixman-1-0:i386 (0.30.2-2) ... Setting up libxcb-render0:i386 (1.9.1-3ubuntu1) ... Setting up libxcb-shm0:i386 (1.9.1-3ubuntu1) ... Setting up libxrender1:i386 (1:0.9.8-1) ... Setting up libcairo2:i386 (1.12.16-0ubuntu2) ... Setting up libcroco3:i386 (0.6.8-2) ... Setting up libpciaccess0:i386 (0.13.2-1) ... Setting up libdrm-intel1:i386 (2.4.49-1) ... Setting up libdrm-nouveau2:i386 (2.4.49-1) ... Setting up libdrm-radeon1:i386 (2.4.49-1) ... Setting up libgfortran3:i386 (4.8.2-5ubuntu3) ... Setting up libglapi-mesa:i386 (9.2.2-1ubuntu1) ... Setting up libx11-xcb1:i386 (2:1.6.2-1ubuntu1) ... Setting up libxcb-dri2-0:i386 (1.9.1-3ubuntu1) ... Setting up libxcb-glx0:i386 (1.9.1-3ubuntu1) ... Setting up libxdamage1:i386 (1:1.1.4-1ubuntu1) ... Setting up libxfixes3:i386 (1:5.0.1-1ubuntu1) ... Setting up libxxf86vm1:i386 (1:1.1.3-1) ... Setting up libgl1-mesa-glx:i386 (9.2.2-1ubuntu1) ... update-alternatives: using /usr/lib/i386-linux-gnu/mesa/ld.so.conf to provide /etc/ld.so.conf.d/i386-linux-gnu_GL.conf (i386-linux-gnu_gl_conf) in auto mode Setting up libglew1.8:i386 (1.9.0.is.1.8.0-0ubuntu2) ... Setting up libjpeg-turbo8:i386 (1.3.0-0ubuntu1) ... Setting up liblcms1:i386 (1.19.dfsg-1.2ubuntu3) ... Setting up libjpeg8:i386 (8c-2ubuntu8) ... Setting up libmng1:i386 (1.0.10-3build1) ... Setting up libpython2.7-minimal:i386 (2.7.6-2) ... Setting up libpython2.7-stdlib:i386 (2.7.6-2) ... Setting up libpython2.7:i386 (2.7.6-2) ... Setting up libexpat1-dev:i386 (2.1.0-4) ... Setting up libpython2.7-dev:i386 (2.7.6-2) ... Setting up libqtcore4:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-xml:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-dbus:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-network:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-script:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-sql:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-xmlpatterns:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up fontconfig (2.11.0-0ubuntu1) ... Regenerating fonts cache... done. Setting up libjbig0:i386 (2.0-2ubuntu1) ... Setting up libtiff5:i386 (4.0.3-5ubuntu1) ... Setting up libxi6:i386 (2:1.7.1.901-1ubuntu1) ... Setting up libqt4-sql-sqlite:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-test:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libunistring0:i386 (0.9.3-5ubuntu1) ... Setting up libxtst6:i386 (2:1.2.2-1) ... Setting up python2.7-minimal (2.7.6-2) ... Linking and byte-compiling packages for runtime python2.7... Setting up libglu1-mesa:i386 (9.0.0-2) ... Setting up python3.3 (3.3.3-2) ... Setting up python3-minimal (3.3.2-17) ... Setting up libpython3-stdlib:i386 (3.3.2-17) ... Setting up file (5.11-2ubuntu4) ... Setting up gettext-base (0.18.3.1-1ubuntu1) ... Setting up emacsen-common (2.0.5) ... given is experimental at /usr/lib/emacsen-common/emacs-package-install line 43. when is experimental at /usr/lib/emacsen-common/emacs-package-install line 45. when is experimental at /usr/lib/emacsen-common/emacs-package-install line 46. Setting up cmake-data (2.8.12.1-0ubuntu1) ... given is experimental at /usr/lib/emacsen-common/emacs-package-install line 43. when is experimental at /usr/lib/emacsen-common/emacs-package-install line 45. when is experimental at /usr/lib/emacsen-common/emacs-package-install line 46. Install cmake-data for emacs Setting up cmake (2.8.12.1-0ubuntu1) ... Setting up gettext (0.18.3.1-1ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up libblas3 (1.2.20110419-7) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up libboost1.54-dev (1.54.0-4~ubuntu4) ... Setting up python2.7 (2.7.6-2) ... Setting up python-minimal (2.7.5-5ubuntu1) ... Setting up libpython-stdlib:i386 (2.7.5-5ubuntu1) ... Setting up python (2.7.5-5ubuntu1) ... Setting up libpython-dev:i386 (2.7.5-5ubuntu1) ... Setting up python2.7-dev (2.7.6-2) ... Setting up python-dev (2.7.5-5ubuntu1) ... Setting up libboost-python1.54-dev (1.54.0-4~ubuntu4) ... Setting up libboost-python-dev (1.54.0.1ubuntu1) ... Setting up libdrm-dev:i386 (2.4.49-1) ... Setting up libgl2ps0 (1.3.8-1) ... Setting up libgl2ps-dev (1.3.8-1) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up x11proto-core-dev (7.0.24-1) ... Setting up libxau-dev:i386 (1:1.0.8-1) ... Setting up libxdmcp-dev:i386 (1:1.1.1-1) ... Setting up x11proto-input-dev (2.3-1) ... Setting up x11proto-kb-dev (1.0.6-2) ... Setting up xtrans-dev (1.3.2-1) ... Setting up libpthread-stubs0-dev:i386 (0.3-4) ... Setting up libxcb1-dev:i386 (1.9.1-3ubuntu1) ... Setting up libx11-dev:i386 (2:1.6.2-1ubuntu1) ... Setting up mesa-common-dev (9.2.2-1ubuntu1) ... Setting up libx11-xcb-dev:i386 (2:1.6.2-1ubuntu1) ... Setting up libxcb-dri2-0-dev:i386 (1.9.1-3ubuntu1) ... Setting up libxcb-glx0-dev:i386 (1.9.1-3ubuntu1) ... Setting up x11proto-xext-dev (7.2.1-1) ... Setting up x11proto-fixes-dev (1:5.0-2ubuntu2) ... Setting up libxfixes-dev:i386 (1:5.0.1-1ubuntu1) ... Setting up x11proto-damage-dev (1:1.2.1-2) ... Setting up libxdamage-dev:i386 (1:1.1.4-1ubuntu1) ... Setting up libxext-dev:i386 (2:1.3.2-1) ... Setting up x11proto-xf86vidmode-dev (2.3.1-2) ... Setting up libxxf86vm-dev:i386 (1:1.1.3-1) ... Setting up x11proto-dri2-dev (2.8-2) ... Setting up x11proto-gl-dev (1.4.16-2) ... Setting up libgl1-mesa-dev (9.2.2-1ubuntu1) ... Setting up libglu1-mesa-dev (9.0.0-2) ... Setting up libglew-dev:i386 (1.9.0.is.1.8.0-0ubuntu2) ... Setting up liblapack3 (3.5.0-2) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libopenbabel4 (2.3.2+dfsg-1build1) ... Setting up libopenbabel-dev (2.3.2+dfsg-1build1) ... Setting up qt4-linguist-tools (4:4.8.4+dfsg-0ubuntu19) ... Setting up qt4-qmake (4:4.8.4+dfsg-0ubuntu19) ... Setting up qtchooser (26-3ubuntu2) ... Setting up qt4-default (4:4.8.4+dfsg-0ubuntu19) ... Setting up pkg-config (0.26-1ubuntu4) ... Setting up python-numpy (1:1.7.1-1ubuntu1) ... Setting up python-sip (4.15.2-1ubuntu1) ... Setting up sip-dev (4.15.2-1ubuntu1) ... Setting up python-sip-dev (4.15.2-1ubuntu1) ... Setting up zlib1g-dev:i386 (1:1.2.8.dfsg-1ubuntu1) ... Setting up libeigen2-dev (2.0.17-1) ... Setting up python3 (3.3.2-17) ... running python rtupdate hooks for python3.3... running python post-rtupdate hooks for python3.3... Setting up dh-python (1.20131021-1ubuntu2) ... Setting up apparmor-easyprof (2.8.0-0ubuntu34) ... Setting up dh-apparmor (2.8.0-0ubuntu34) ... Setting up debhelper (9.20130921ubuntu1) ... Setting up libqtgui4:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-declarative:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-designer:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-help:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-opengl:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-qt3support:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-scripttools:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-svg:i386 (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-dev-bin (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-dev (4:4.8.4+dfsg-0ubuntu19) ... Setting up libqt4-opengl-dev (4:4.8.4+dfsg-0ubuntu19) ... Setting up qt4-dev-tools (4:4.8.4+dfsg-0ubuntu19) ... Processing triggers for libc-bin ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.17-93ubuntu4 make_3.81-8.2ubuntu3 dpkg-dev_1.17.1ubuntu1 gcc-4.8_4.8.2-5ubuntu3 g++-4.8_4.8.2-5ubuntu3 binutils_2.23.91.20131123-1ubuntu1 libstdc++-4.8-dev_4.8.2-5ubuntu3 libstdc++6_4.8.2-5ubuntu3 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::Quilt gpgv: Signature made Tue Nov 26 18:49:12 2013 UTC using RSA key ID F2672094 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./avogadro_1.1.0-4ubuntu1~ppa1.dsc dpkg-source: info: extracting avogadro in avogadro-1.1.0 dpkg-source: info: unpacking avogadro_1.1.0.orig.tar.bz2 dpkg-source: info: unpacking avogadro_1.1.0-4ubuntu1~ppa1.debian.tar.gz dpkg-source: info: applying link_to_libgl2ps.patch dpkg-source: info: applying boost148.patch dpkg-buildpackage: source package avogadro dpkg-buildpackage: source version 1.1.0-4ubuntu1~ppa1 dpkg-buildpackage: source distribution trusty dpkg-source --before-build avogadro-1.1.0 dpkg-buildpackage: host architecture i386 /usr/bin/fakeroot debian/rules clean dh clean --with python2 --parallel dh_testdir -O--parallel dh_auto_clean -O--parallel debian/rules override_dh_clean make[1]: Entering directory `/build/buildd/avogadro-1.1.0' dh_clean conf.log conf.pri make[1]: Leaving directory `/build/buildd/avogadro-1.1.0' debian/rules build dh build --with python2 --parallel dh_testdir -O--parallel debian/rules override_dh_auto_configure make[1]: Entering directory `/build/buildd/avogadro-1.1.0' dh_auto_configure -- \ -DENABLE_GLSL=ON \ -DENABLE_RPATH=OFF \ -DENABLE_UPDATE_CHECKER=OFF \ -DPYTHON_EXECUTABLE=/usr/bin/python2.7 \ -DPYTHON_LIBRARY=/usr/lib/i386-linux-gnu/libpython2.7.so \ -DPYTHON_INCLUDE_DIR=/usr/include/python2.7/ -- The C compiler identification is GNU 4.8.2 -- The CXX compiler identification is GNU 4.8.2 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- The build type is RelWithDebInfo -- Performing Test HAVE_NO_RTTI -- Performing Test HAVE_NO_RTTI - Success -- Performing Test HAVE_RTTI -- Performing Test HAVE_RTTI - Success -- Performing Test HAVE_GCC_VISIBILITY -- Performing Test HAVE_GCC_VISIBILITY - Success -- Performing Test COMPILES_WITHOUT_FPERMISSIVE -- Performing Test COMPILES_WITHOUT_FPERMISSIVE - Failed -- Looking for Q_WS_X11 -- Looking for Q_WS_X11 - found -- Looking for Q_WS_WIN -- Looking for Q_WS_WIN - not found -- Looking for Q_WS_QWS -- Looking for Q_WS_QWS - not found -- Looking for Q_WS_MAC -- Looking for Q_WS_MAC - not found -- Found Qt4: /usr/bin/qmake (found suitable version "4.8.4", minimum required is "4.6.0") -- Looking for XOpenDisplay in /usr/lib/i386-linux-gnu/libX11.so;/usr/lib/i386-linux-gnu/libXext.so -- Looking for XOpenDisplay in /usr/lib/i386-linux-gnu/libX11.so;/usr/lib/i386-linux-gnu/libXext.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Found X11: /usr/lib/i386-linux-gnu/libX11.so -- Found OpenGL: /usr/lib/i386-linux-gnu/libGL.so -- Found lupdate: /usr/bin/lupdate-qt4 -- Found lrelease: /usr/bin/lrelease-qt4 -- Found lconvert: /usr/bin/lconvert -- Found Eigen2: /usr/include/eigen2 -- Found ZLIB: /usr/lib/i386-linux-gnu/libz.so (found version "1.2.8") -- Found PkgConfig: /usr/bin/pkg-config (found version "0.26") -- checking for module 'openbabel-2.0>=2.3.0' -- found openbabel-2.0, version 2.3.2 -- Found OpenBabel 2.3 or later: openbabel -- Found Git revision is: -- Building released version. -- Searching for python dependencies... -- [1/5] Boost Python -- Boost version: 1.54.0 -- Found the following Boost libraries: -- python -- Boost Python found... -- [2/5] Python Libraries -- Found PythonLibs: /usr/lib/i386-linux-gnu/libpython2.7.so -- [3/5] Python Interpreter -- Found PythonInterp: /usr/bin/python2.7 (found version "2.7.6") -- [4/5] Numpy Module -- Numpy headers found -- [5/5] SIP Module -- SIP version 265986 found -- Found SIP: /usr/include/python2.7 -- All python dependencies found - Python support enabled -- GLEW found and GLSL support enabled -- Threaded OpenGL rendering not enabled -- Setting new boost python libraries -- Enabled python terminal -- Found Qt4: /usr/bin/qmake (found suitable version "4.8.4", minimum required is "4.6") -- Linking in static plugins: bsdyengine;navigatetool;elementcolor -- Python site-packages directory: /usr/lib/python2.7/dist-packages -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- docbook tools not found, doc targets disabled -- Configuring done CMake Warning (dev) in libavogadro/src/CMakeLists.txt: Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link interface. Run "cmake --help-policy CMP0022" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Target "avogadro" has an INTERFACE_LINK_LIBRARIES property which differs from its LINK_INTERFACE_LIBRARIES properties. INTERFACE_LINK_LIBRARIES: openbabel;/usr/lib/i386-linux-gnu/libQtOpenGL.so;/usr/lib/i386-linux-gnu/libQtGui.so;/usr/lib/i386-linux-gnu/libQtCore.so;/usr/lib/i386-linux-gnu/libGLU.so;/usr/lib/i386-linux-gnu/libGL.so;/usr/lib/i386-linux-gnu/libX11.so;/usr/lib/i386-linux-gnu/libXext.so;/usr/lib/i386-linux-gnu/libGLEW.so;/usr/lib/i386-linux-gnu/libpython2.7.so;/usr/lib/i386-linux-gnu/libboost_python.so;bsdyengine;navigatetool;elementcolor LINK_INTERFACE_LIBRARIES: This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) in libavogadro/src/extensions/surfaces/openqube/CMakeLists.txt: Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link interface. Run "cmake --help-policy CMP0022" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Target "OpenQube" has an INTERFACE_LINK_LIBRARIES property which differs from its LINK_INTERFACE_LIBRARIES properties. INTERFACE_LINK_LIBRARIES: $<$>:/usr/lib/i386-linux-gnu/libQtCore.so>;$<$:/usr/lib/i386-linux-gnu/libQtCore.so> LINK_INTERFACE_LIBRARIES: This warning is for project developers. Use -Wno-dev to suppress it. -- Generating done -- Build files have been written to: /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu make[1]: Leaving directory `/build/buildd/avogadro-1.1.0' dh_auto_build -O--parallel make[1]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -H/build/buildd/avogadro-1.1.0 -B/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/elementcolor.dir/build.make libavogadro/src/colors/CMakeFiles/elementcolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 0%] Generating moc_elementcolor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_elementcolor.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/elementcolor.dir/DependInfo.cmake --color= Scanning dependencies of target elementcolor make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/elementcolor.dir/build.make libavogadro/src/colors/CMakeFiles/elementcolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 0%] Building CXX object libavogadro/src/colors/CMakeFiles/elementcolor.dir/elementcolor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -DQT_STATICPLUGIN -fPIC -o CMakeFiles/elementcolor.dir/elementcolor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/colors/elementcolor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/colors/elementcolor.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 52 [ 1%] Building CXX object libavogadro/src/colors/CMakeFiles/elementcolor.dir/moc_elementcolor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -DQT_STATICPLUGIN -fPIC -o CMakeFiles/elementcolor.dir/moc_elementcolor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_elementcolor.cxx Linking CXX static library elementcolor.a cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/cmake -P CMakeFiles/elementcolor.dir/cmake_clean_target.cmake cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/cmake -E cmake_link_script CMakeFiles/elementcolor.dir/link.txt --verbose=1 /usr/bin/ar cr elementcolor.a CMakeFiles/elementcolor.dir/elementcolor.cpp.o CMakeFiles/elementcolor.dir/moc_elementcolor.cxx.o /usr/bin/ranlib elementcolor.a make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 52 [ 1%] Built target elementcolor make -f libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build.make libavogadro/src/engines/CMakeFiles/bsdyengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 1%] Generating ui_bsdysettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_bsdysettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/bsdysettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 42 [ 2%] Generating moc_bsdyengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_bsdyengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/bsdyengine.dir/DependInfo.cmake --color= Scanning dependencies of target bsdyengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build.make libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 2%] Building CXX object libavogadro/src/engines/CMakeFiles/bsdyengine.dir/bsdyengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -DQT_STATICPLUGIN -fPIC -o CMakeFiles/bsdyengine.dir/bsdyengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/bsdyengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/bsdyengine.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/bsdyengine.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 2%] Building CXX object libavogadro/src/engines/CMakeFiles/bsdyengine.dir/moc_bsdyengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -DQT_STATICPLUGIN -fPIC -o CMakeFiles/bsdyengine.dir/moc_bsdyengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_bsdyengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/bsdyengine.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_bsdyengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX static library bsdyengine.a cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -P CMakeFiles/bsdyengine.dir/cmake_clean_target.cmake cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/bsdyengine.dir/link.txt --verbose=1 /usr/bin/ar cr bsdyengine.a CMakeFiles/bsdyengine.dir/bsdyengine.cpp.o CMakeFiles/bsdyengine.dir/moc_bsdyengine.cxx.o /usr/bin/ranlib bsdyengine.a make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 42 [ 2%] Built target bsdyengine make -f libavogadro/src/tools/CMakeFiles/navigatetool.dir/build.make libavogadro/src/tools/CMakeFiles/navigatetool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 2%] Generating qrc_navigatetool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name navigatetool -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_navigatetool.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/tools/navigatetool.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 2%] Generating moc_navigatetool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_navigatetool.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 2%] Generating ui_navigatesettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/ui_navigatesettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/tools/navigatesettingswidget.ui cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/navigatetool.dir/DependInfo.cmake --color= Scanning dependencies of target navigatetool make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/navigatetool.dir/build.make libavogadro/src/tools/CMakeFiles/navigatetool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 69 [ 3%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/navigatetool.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/navigatetool.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/navigatetool.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/navigatetool.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/navigatetool.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 3%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/eyecandy.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/eyecandy.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/eyecandy.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/eyecandy.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/eyecandy.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 3%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/moc_navigatetool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/moc_navigatetool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_navigatetool.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/navigatetool.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_navigatetool.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 3%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/qrc_navigatetool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/qrc_navigatetool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_navigatetool.cxx Linking CXX static library navigatetool.a cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/cmake -P CMakeFiles/navigatetool.dir/cmake_clean_target.cmake cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/navigatetool.dir/link.txt --verbose=1 /usr/bin/ar cr navigatetool.a CMakeFiles/navigatetool.dir/navigatetool.cpp.o CMakeFiles/navigatetool.dir/eyecandy.cpp.o CMakeFiles/navigatetool.dir/moc_navigatetool.cxx.o CMakeFiles/navigatetool.dir/qrc_navigatetool.cxx.o /usr/bin/ranlib navigatetool.a make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 69 [ 3%] Built target navigatetool make -f libavogadro/src/CMakeFiles/avogadro.dir/build.make libavogadro/src/CMakeFiles/avogadro.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 3%] Generating qrc_pythontool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name pythontool -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/qrc_pythontool.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/pythontool.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 3%] Generating moc_animation.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_animation.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 6 [ 4%] Generating moc_atom.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_atom.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 4%] Generating moc_bond.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_bond.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 4%] Generating moc_color.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_color.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 4%] Generating moc_colorbutton.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_colorbutton.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 4%] Generating moc_cube.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_cube.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 4%] Generating moc_dockextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_dockextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 4%] Generating moc_dockwidget.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_dockwidget.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 4%] Generating moc_elementdetail_p.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && 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/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_mesh.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 5%] Generating moc_meshgenerator.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_meshgenerator.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 5%] Generating moc_molecule.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_molecule.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 8 [ 6%] Generating 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cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 6%] Generating moc_primitive.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_primitive.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 6%] Generating moc_protein.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_protein.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 6%] Generating moc_readfilethread_p.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_readfilethread_p.cxx_parameters 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@/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_tool.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 7%] Generating moc_toolgroup.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_toolgroup.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 7%] Generating moc_zmatrix.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_zmatrix.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 7%] Generating moc_pythonengine_p.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_pythonengine_p.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 7%] Generating moc_pythonerror.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_pythonerror.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 7%] Generating moc_pythonextension_p.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_pythonextension_p.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 10 [ 8%] Generating moc_pythontool_p.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && 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/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_id.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_id.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 8%] Generating libavogadro_ko.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/ko.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ko.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ko.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent 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/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_fi.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_fi.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 8%] Generating libavogadro_bs.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/bs.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_bs.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_bs.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_bs.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_bs.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 8%] Generating libavogadro_en_CA.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/en_CA.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_CA.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_CA.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_CA.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_CA.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 8%] Generating libavogadro_he.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/he.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_he.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_he.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_he.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_he.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 8%] Generating libavogadro_it.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/it.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_it.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_it.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_it.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_it.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 11 [ 9%] Generating libavogadro_en_AU.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/en_AU.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_AU.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_AU.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_AU.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_AU.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 9%] Generating libavogadro_vi.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/vi.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_vi.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_vi.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_vi.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_vi.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 9%] Generating libavogadro_de.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/de.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_de.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_de.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_de.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_de.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 9%] Generating libavogadro_es.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/es.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_es.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_es.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_es.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_es.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 9%] Generating libavogadro_hu.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/hu.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_hu.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_hu.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_hu.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_hu.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 9%] Generating libavogadro_eu.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/eu.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_eu.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_eu.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_eu.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_eu.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 9%] Generating libavogadro_oc.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/oc.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_oc.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_oc.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_oc.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_oc.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 9%] Generating libavogadro_el.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/el.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_el.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_el.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_el.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_el.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 12 [ 10%] Generating libavogadro_nb.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/nb.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_nb.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_nb.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_nb.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_nb.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 10%] Generating libavogadro_pt.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/pt.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pt.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pt.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pt.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pt.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 10%] Generating libavogadro_en_GB.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/en_GB.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_GB.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_GB.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_GB.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_en_GB.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 10%] Generating libavogadro_sv.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/sv.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sv.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sv.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sv.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sv.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 10%] Generating libavogadro_ca.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/ca.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ca.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ca.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ca.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ca.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 10%] Generating libavogadro_ca@valencia.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/ca@valencia.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ca@valencia.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ca@valencia.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ca@valencia.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ca@valencia.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 10%] Generating libavogadro_ug.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/ug.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ug.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ug.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ug.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ug.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 10%] Generating libavogadro_nl.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/nl.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_nl.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_nl.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_nl.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_nl.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 13 [ 11%] Generating libavogadro_hi.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/hi.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_hi.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_hi.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_hi.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_hi.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 11%] Generating libavogadro_da.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/da.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_da.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_da.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_da.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_da.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 11%] Generating libavogadro_ar.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/ar.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ar.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ar.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ar.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ar.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 11%] Generating libavogadro_sr.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/sr.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sr.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sr.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sr.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sr.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 11%] Generating libavogadro_gl.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/gl.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_gl.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_gl.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_gl.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_gl.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 11%] Generating libavogadro_ja.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/ja.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ja.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ja.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ja.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ja.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 11%] Generating libavogadro_bg.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/bg.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_bg.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_bg.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_bg.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_bg.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 11%] Generating libavogadro_tr.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/tr.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_tr.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_tr.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_tr.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_tr.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 14 [ 12%] Generating libavogadro_pl.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/pl.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pl.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pl.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pl.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pl.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 12%] Generating libavogadro_ru.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/ru.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ru.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ru.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ru.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_ru.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 12%] Generating libavogadro_zh_CN.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/zh_CN.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_zh_CN.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_zh_CN.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_zh_CN.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_zh_CN.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 12%] Generating libavogadro_sk.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/sk.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sk.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sk.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sk.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_sk.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 12%] Generating libavogadro_cs.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/cs.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_cs.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_cs.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_cs.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_cs.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 12%] Generating libavogadro_fr.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/fr.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_fr.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_fr.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_fr.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_fr.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 12%] Generating libavogadro_zh_TW.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/zh_TW.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_zh_TW.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_zh_TW.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_zh_TW.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_zh_TW.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 12%] Generating libavogadro_kn.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/kn.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_kn.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_kn.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_kn.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_kn.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 15 [ 13%] Generating libavogadro_uk.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/uk.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_uk.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_uk.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_uk.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_uk.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 13%] Generating libavogadro_pt_BR.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/libavogadro/pt_BR.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pt_BR.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/libavogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pt_BR.ts Scanning directory '/build/buildd/avogadro-1.1.0/libavogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pt_BR.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/libavogadro_pt_BR.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/CMakeFiles/avogadro.dir/DependInfo.cmake --color= Scanning dependencies of target avogadro make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/CMakeFiles/avogadro.dir/build.make libavogadro/src/CMakeFiles/avogadro.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 13%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/animation.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/animation.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/animation.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/animation.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/animation.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 13%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/atom.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/atom.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/atom.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/atom.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/atom.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 13%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/bond.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/bond.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/bond.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/bond.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/bond.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 13%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/camera.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/camera.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/camera.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/libavogadro/src/camera.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/camera.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 13%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/color.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/color.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/color.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 16 [ 14%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/colorbutton.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/colorbutton.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/colorbutton.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 14%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/cube.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/cube.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/cube.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/cube.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/cube.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 14%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/cylinder_p.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/cylinder_p.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/cylinder_p.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/cylinder_p.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/cylinder_p.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 14%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/dockextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/dockextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/dockextension.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 14%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/dockwidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/dockwidget.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/dockwidget.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 14%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/elementdetail_p.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/elementdetail_p.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/elementdetail_p.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 14%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/elementitem_p.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/elementitem_p.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/elementitem_p.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 14%] 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CMakeFiles/avogadro.dir/elementtranslator.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/elementtranslator.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 14%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/engine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/engine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engine.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ 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-I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/extension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extension.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 15%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/fragment.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/fragment.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/fragment.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/fragment.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/fragment.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 15%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/glhit.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/glhit.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/glhit.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 15%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/global.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/global.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/global.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 15%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/glpainter_p.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/glpainter_p.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/glpainter_p.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/painter.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/glpainter_p.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/glpainter_p.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 15%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/glwidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/glwidget.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/libavogadro/src/camera.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp:32: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp: In member function 'virtual void Avogadro::GLWidget::render()': /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp:765:48: warning: narrowing conversion of '((Avogadro::GLWidgetPrivate*)((Avogadro::GLWidget*)this)->Avogadro::GLWidget::d)->Avogadro::GLWidgetPrivate::background.QColor::redF()' from 'qreal {aka double}' to 'GLfloat {aka float}' inside { } is ill-formed in C++11 [-Wnarrowing] GLfloat fogColor[4]= {d->background.redF(), d->background.greenF(), ^ /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp:765:72: warning: narrowing conversion of '((Avogadro::GLWidgetPrivate*)((Avogadro::GLWidget*)this)->Avogadro::GLWidget::d)->Avogadro::GLWidgetPrivate::background.QColor::greenF()' from 'qreal {aka double}' to 'GLfloat {aka float}' inside { } is ill-formed in C++11 [-Wnarrowing] GLfloat fogColor[4]= {d->background.redF(), d->background.greenF(), ^ /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp:766:49: warning: narrowing conversion of '((Avogadro::GLWidgetPrivate*)((Avogadro::GLWidget*)this)->Avogadro::GLWidget::d)->Avogadro::GLWidgetPrivate::background.QColor::blueF()' from 'qreal {aka double}' to 'GLfloat {aka float}' inside { } is ill-formed in C++11 [-Wnarrowing] d->background.blueF(), d->background.alphaF()}; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp:766:73: warning: narrowing conversion of '((Avogadro::GLWidgetPrivate*)((Avogadro::GLWidget*)this)->Avogadro::GLWidget::d)->Avogadro::GLWidgetPrivate::background.QColor::alphaF()' from 'qreal {aka double}' to 'GLfloat {aka float}' inside { } is ill-formed in C++11 [-Wnarrowing] d->background.blueF(), d->background.alphaF()}; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp: In member function 'virtual bool Avogadro::GLWidget::renderClippedBox(const Vector3d&, const Vector3d&, const Vector3d&, const Vector3d&, double)': /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp:983:11: warning: array subscript is above array bounds [-Warray-bounds] buff[j] = 0; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp:983:11: warning: array subscript is above array bounds [-Warray-bounds] buff[j] = 0; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp:983:11: warning: array subscript is above array bounds [-Warray-bounds] buff[j] = 0; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp:983:11: warning: array subscript is above array bounds [-Warray-bounds] buff[j] = 0; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 15%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/idlist.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/idlist.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/idlist.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/idlist.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/idlist.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 15%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/mesh.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/mesh.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/mesh.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/mesh.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/mesh.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 18 [ 16%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/meshgenerator.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/meshgenerator.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/meshgenerator.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/meshgenerator.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/meshgenerator.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 16%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/molecule.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/molecule.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/molecule.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/molecule.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/molecule.cpp: In member function 'Avogadro::Molecule& Avogadro::Molecule::operator=(const Avogadro::Molecule&)': /build/buildd/avogadro-1.1.0/libavogadro/src/molecule.cpp:1655:33: warning: ordered comparison of pointer with integer zero [-Wextra] if (other.m_atoms.at(i) > 0) { ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 16%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moleculefile.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moleculefile.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/moleculefile.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/moleculefile.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/moleculefile.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 16%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/navigate.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/navigate.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/navigate.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/navigate.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/navigate.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 16%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/neighborlist.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/neighborlist.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/neighborlist.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/neighborlist.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/neighborlist.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 16%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/painter.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/painter.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/painter.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/painter.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/painter.cpp:28: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 16%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/periodictablescene_p.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/periodictablescene_p.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/periodictablescene_p.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 16%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/periodictableview.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/periodictableview.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/periodictableview.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 19 [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/plotaxis.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/plotaxis.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/plotaxis.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/plotobject.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/plotobject.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/plotobject.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/plotpoint.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/plotpoint.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/plotpoint.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/plotwidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/plotwidget.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/plotwidget.cpp /build/buildd/avogadro-1.1.0/libavogadro/src/plotwidget.cpp: In member function 'virtual void Avogadro::PlotWidget::mouseMoveEvent(QMouseEvent*)': /build/buildd/avogadro-1.1.0/libavogadro/src/plotwidget.cpp:677:18: warning: variable 'old' set but not used [-Wunused-but-set-variable] PlotPoint *old; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/plugin.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/plugin.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/plugin.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pluginmanager.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/pluginmanager.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/pluginmanager.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/pythonengine_p.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/pluginmanager.cpp:32: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/pluginmanager.cpp: In static member function 'static QList Avogadro::PluginManager::scripts(const QString&)': /build/buildd/avogadro-1.1.0/libavogadro/src/pluginmanager.cpp:326:10: warning: variable 'failed' set but not used [-Wunused-but-set-variable] bool failed = false; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/primitive.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/primitive.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/primitive.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/primitive.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/primitivelist.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/primitivelist.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/primitivelist.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/primitivelist.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 20 [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/protein.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/protein.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/protein.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/protein.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/readfilethread_p.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/readfilethread_p.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/readfilethread_p.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/moleculefile.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/readfilethread_p.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/residue.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/residue.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/residue.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/fragment.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/residue.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/residue.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/sphere_p.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/sphere_p.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/sphere_p.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/sphere_p.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/sphere_p.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/textrenderer_p.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/textrenderer_p.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/textrenderer_p.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/textrenderer_p.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/textrenderer_p.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/textmatrixeditor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/textmatrixeditor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/textmatrixeditor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/textmatrixeditor.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/textmatrixeditor.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/tool.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/tool.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tool.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/toolgroup.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/toolgroup.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/toolgroup.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 21 [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/undosequence.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/undosequence.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/undosequence.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/zmatrix.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/zmatrix.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/zmatrix.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/zmatrix.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythoninterpreter.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/pythoninterpreter.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/pythoninterpreter.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/pythoninterpreter.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/pythoninterpreter.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythonscript.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/pythonscript.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/pythonscript.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythonerror.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/pythonerror.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/pythonerror.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythontool_p.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/pythontool_p.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/pythontool_p.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/navigate.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/pythontool_p.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythonengine_p.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/pythonengine_p.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/pythonengine_p.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/pythonengine_p.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/pythonengine_p.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythonextension_p.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/pythonextension_p.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/pythonextension_p.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/pythonextension_p.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/pythonextension_p.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 22 [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_animation.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_animation.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_animation.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/animation.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_animation.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_atom.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_atom.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_atom.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/atom.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_atom.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_bond.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_bond.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_bond.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/bond.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_bond.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_color.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_color.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_color.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_colorbutton.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_colorbutton.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_colorbutton.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_cube.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_cube.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_cube.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/cube.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_cube.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_dockextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_dockextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_dockextension.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_dockwidget.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_dockwidget.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_dockwidget.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 23 [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_elementdetail_p.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_elementdetail_p.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_elementdetail_p.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_elementtranslator.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_elementtranslator.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_elementtranslator.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_engine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_engine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_engine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_engine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_extension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_extension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_extension.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_fragment.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_fragment.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_fragment.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/fragment.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_fragment.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_glwidget.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_glwidget.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_glwidget.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_glwidget.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_mesh.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_mesh.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_mesh.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/mesh.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_mesh.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_meshgenerator.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_meshgenerator.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_meshgenerator.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/meshgenerator.h:30, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_meshgenerator.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 24 [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_molecule.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_molecule.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_molecule.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_molecule.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_moleculefile.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_moleculefile.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_moleculefile.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/moleculefile.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_moleculefile.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_periodictablescene_p.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_periodictablescene_p.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_periodictablescene_p.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_periodictableview.cxx.o cd 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/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_periodictableview.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_plotwidget.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_plotwidget.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_plotwidget.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_plugin.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_plugin.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_plugin.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_pluginmanager.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_pluginmanager.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_pluginmanager.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_primitive.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_primitive.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_primitive.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_primitive.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 25 [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_protein.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_protein.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_protein.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_readfilethread_p.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_readfilethread_p.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_readfilethread_p.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_residue.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_residue.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_residue.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/fragment.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/residue.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_residue.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_textmatrixeditor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_textmatrixeditor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_textmatrixeditor.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/textmatrixeditor.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_textmatrixeditor.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_tool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_tool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_tool.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_toolgroup.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_toolgroup.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_toolgroup.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_zmatrix.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_zmatrix.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_zmatrix.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_pythonengine_p.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_pythonengine_p.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_pythonengine_p.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/pythonengine_p.h:33, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_pythonengine_p.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_pythonerror.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_pythonerror.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_pythonerror.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 26 [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_pythonextension_p.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_pythonextension_p.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_pythonextension_p.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/../../../libavogadro/src/pythonextension_p.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_pythonextension_p.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_pythontool_p.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/moc_pythontool_p.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/moc_pythontool_p.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/qrc_pythontool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Davogadro_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -o CMakeFiles/avogadro.dir/qrc_pythontool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/qrc_pythontool.cxx Linking CXX shared library ../../lib/libavogadro.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/avogadro.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,libavogadro.so.1 -o ../../lib/libavogadro.so.1.1.0 CMakeFiles/avogadro.dir/animation.cpp.o CMakeFiles/avogadro.dir/atom.cpp.o CMakeFiles/avogadro.dir/bond.cpp.o CMakeFiles/avogadro.dir/camera.cpp.o CMakeFiles/avogadro.dir/color.cpp.o CMakeFiles/avogadro.dir/colorbutton.cpp.o CMakeFiles/avogadro.dir/cube.cpp.o CMakeFiles/avogadro.dir/cylinder_p.cpp.o CMakeFiles/avogadro.dir/dockextension.cpp.o CMakeFiles/avogadro.dir/dockwidget.cpp.o CMakeFiles/avogadro.dir/elementdetail_p.cpp.o CMakeFiles/avogadro.dir/elementitem_p.cpp.o CMakeFiles/avogadro.dir/elementtranslator.cpp.o CMakeFiles/avogadro.dir/engine.cpp.o CMakeFiles/avogadro.dir/extension.cpp.o CMakeFiles/avogadro.dir/fragment.cpp.o CMakeFiles/avogadro.dir/glhit.cpp.o CMakeFiles/avogadro.dir/global.cpp.o CMakeFiles/avogadro.dir/glpainter_p.cpp.o CMakeFiles/avogadro.dir/glwidget.cpp.o CMakeFiles/avogadro.dir/idlist.cpp.o CMakeFiles/avogadro.dir/mesh.cpp.o CMakeFiles/avogadro.dir/meshgenerator.cpp.o CMakeFiles/avogadro.dir/molecule.cpp.o CMakeFiles/avogadro.dir/moleculefile.cpp.o CMakeFiles/avogadro.dir/navigate.cpp.o CMakeFiles/avogadro.dir/neighborlist.cpp.o CMakeFiles/avogadro.dir/painter.cpp.o CMakeFiles/avogadro.dir/periodictablescene_p.cpp.o CMakeFiles/avogadro.dir/periodictableview.cpp.o CMakeFiles/avogadro.dir/plotaxis.cpp.o CMakeFiles/avogadro.dir/plotobject.cpp.o CMakeFiles/avogadro.dir/plotpoint.cpp.o CMakeFiles/avogadro.dir/plotwidget.cpp.o CMakeFiles/avogadro.dir/plugin.cpp.o CMakeFiles/avogadro.dir/pluginmanager.cpp.o CMakeFiles/avogadro.dir/primitive.cpp.o CMakeFiles/avogadro.dir/primitivelist.cpp.o CMakeFiles/avogadro.dir/protein.cpp.o CMakeFiles/avogadro.dir/readfilethread_p.cpp.o CMakeFiles/avogadro.dir/residue.cpp.o CMakeFiles/avogadro.dir/sphere_p.cpp.o CMakeFiles/avogadro.dir/textrenderer_p.cpp.o CMakeFiles/avogadro.dir/textmatrixeditor.cpp.o CMakeFiles/avogadro.dir/tool.cpp.o CMakeFiles/avogadro.dir/toolgroup.cpp.o CMakeFiles/avogadro.dir/undosequence.cpp.o CMakeFiles/avogadro.dir/zmatrix.cpp.o CMakeFiles/avogadro.dir/pythoninterpreter.cpp.o CMakeFiles/avogadro.dir/pythonscript.cpp.o CMakeFiles/avogadro.dir/pythonerror.cpp.o CMakeFiles/avogadro.dir/pythontool_p.cpp.o CMakeFiles/avogadro.dir/pythonengine_p.cpp.o CMakeFiles/avogadro.dir/pythonextension_p.cpp.o CMakeFiles/avogadro.dir/moc_animation.cxx.o CMakeFiles/avogadro.dir/moc_atom.cxx.o CMakeFiles/avogadro.dir/moc_bond.cxx.o CMakeFiles/avogadro.dir/moc_color.cxx.o CMakeFiles/avogadro.dir/moc_colorbutton.cxx.o CMakeFiles/avogadro.dir/moc_cube.cxx.o CMakeFiles/avogadro.dir/moc_dockextension.cxx.o CMakeFiles/avogadro.dir/moc_dockwidget.cxx.o CMakeFiles/avogadro.dir/moc_elementdetail_p.cxx.o CMakeFiles/avogadro.dir/moc_elementtranslator.cxx.o CMakeFiles/avogadro.dir/moc_engine.cxx.o CMakeFiles/avogadro.dir/moc_extension.cxx.o CMakeFiles/avogadro.dir/moc_fragment.cxx.o CMakeFiles/avogadro.dir/moc_glwidget.cxx.o CMakeFiles/avogadro.dir/moc_mesh.cxx.o CMakeFiles/avogadro.dir/moc_meshgenerator.cxx.o CMakeFiles/avogadro.dir/moc_molecule.cxx.o CMakeFiles/avogadro.dir/moc_moleculefile.cxx.o CMakeFiles/avogadro.dir/moc_periodictablescene_p.cxx.o CMakeFiles/avogadro.dir/moc_periodictableview.cxx.o CMakeFiles/avogadro.dir/moc_plotwidget.cxx.o CMakeFiles/avogadro.dir/moc_plugin.cxx.o CMakeFiles/avogadro.dir/moc_pluginmanager.cxx.o CMakeFiles/avogadro.dir/moc_primitive.cxx.o CMakeFiles/avogadro.dir/moc_protein.cxx.o CMakeFiles/avogadro.dir/moc_readfilethread_p.cxx.o CMakeFiles/avogadro.dir/moc_residue.cxx.o CMakeFiles/avogadro.dir/moc_textmatrixeditor.cxx.o CMakeFiles/avogadro.dir/moc_tool.cxx.o CMakeFiles/avogadro.dir/moc_toolgroup.cxx.o CMakeFiles/avogadro.dir/moc_zmatrix.cxx.o CMakeFiles/avogadro.dir/moc_pythonengine_p.cxx.o CMakeFiles/avogadro.dir/moc_pythonerror.cxx.o CMakeFiles/avogadro.dir/moc_pythonextension_p.cxx.o CMakeFiles/avogadro.dir/moc_pythontool_p.cxx.o CMakeFiles/avogadro.dir/qrc_pythontool.cxx.o -lopenbabel -lQtOpenGL -lQtGui -lQtCore -lGLU -lGL -lX11 -lXext -lGLEW -lpython2.7 -lboost_python engines/bsdyengine.a tools/navigatetool.a colors/elementcolor.a -lopenbabel -lQtGui -lQtCore -lGLU -lGL -lX11 -lXext cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src && /usr/bin/cmake -E cmake_symlink_library ../../lib/libavogadro.so.1.1.0 ../../lib/libavogadro.so.1 ../../lib/libavogadro.so make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 [ 24%] Built target avogadro make -f libavogadro/src/engines/CMakeFiles/axesengine.dir/build.make libavogadro/src/engines/CMakeFiles/axesengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 24%] Generating ui_axessettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_axessettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/axessettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 24%] Generating moc_axesengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_axesengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/axesengine.dir/DependInfo.cmake --color= Scanning dependencies of target axesengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/axesengine.dir/build.make libavogadro/src/engines/CMakeFiles/axesengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 24%] Building CXX object libavogadro/src/engines/CMakeFiles/axesengine.dir/axesengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Daxesengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/axesengine.dir/axesengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/axesengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/axesengine.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/axesengine.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 41 [ 25%] Building CXX object libavogadro/src/engines/CMakeFiles/axesengine.dir/moc_axesengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Daxesengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/axesengine.dir/moc_axesengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_axesengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/axesengine.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_axesengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/axesengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/axesengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,axesengine.so -o ../../../lib/axesengine.so CMakeFiles/axesengine.dir/axesengine.cpp.o CMakeFiles/axesengine.dir/moc_axesengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 41 [ 25%] Built target axesengine make -f libavogadro/src/engines/CMakeFiles/cartoonengine.dir/build.make libavogadro/src/engines/CMakeFiles/cartoonengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Generating ui_cartoonsettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_cartoonsettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/cartoonsettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Generating moc_cartoonengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_cartoonengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/cartoonengine.dir/DependInfo.cmake --color= Scanning dependencies of target cartoonengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/cartoonengine.dir/build.make libavogadro/src/engines/CMakeFiles/cartoonengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Building CXX object libavogadro/src/engines/CMakeFiles/cartoonengine.dir/cartoonengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcartoonengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/cartoonengine.dir/cartoonengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/cartoonengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/cartoonengine.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/cartoonengine.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Building CXX object libavogadro/src/engines/CMakeFiles/cartoonengine.dir/cartoonmeshgenerator.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcartoonengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/cartoonengine.dir/cartoonmeshgenerator.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/cartoonmeshgenerator.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/cartoonmeshgenerator.h:42, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/cartoonmeshgenerator.cpp:36: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Building CXX object libavogadro/src/engines/CMakeFiles/cartoonengine.dir/moc_cartoonengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcartoonengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/cartoonengine.dir/moc_cartoonengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_cartoonengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/cartoonengine.h:30, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_cartoonengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/cartoonengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/cartoonengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,cartoonengine.so -o ../../../lib/cartoonengine.so CMakeFiles/cartoonengine.dir/cartoonengine.cpp.o CMakeFiles/cartoonengine.dir/cartoonmeshgenerator.cpp.o CMakeFiles/cartoonengine.dir/moc_cartoonengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Built target cartoonengine make -f libavogadro/src/engines/CMakeFiles/dipoleengine.dir/build.make libavogadro/src/engines/CMakeFiles/dipoleengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Generating ui_dipolesettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_dipolesettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/dipolesettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Generating moc_dipoleengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_dipoleengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/dipoleengine.dir/DependInfo.cmake --color= Scanning dependencies of target dipoleengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/dipoleengine.dir/build.make libavogadro/src/engines/CMakeFiles/dipoleengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Building CXX object libavogadro/src/engines/CMakeFiles/dipoleengine.dir/dipoleengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Ddipoleengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/dipoleengine.dir/dipoleengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/dipoleengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/dipoleengine.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/dipoleengine.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Building CXX object libavogadro/src/engines/CMakeFiles/dipoleengine.dir/moc_dipoleengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Ddipoleengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/dipoleengine.dir/moc_dipoleengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_dipoleengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/dipoleengine.h:30, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_dipoleengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/dipoleengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/dipoleengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,dipoleengine.so -o ../../../lib/dipoleengine.so CMakeFiles/dipoleengine.dir/dipoleengine.cpp.o CMakeFiles/dipoleengine.dir/moc_dipoleengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Built target dipoleengine make -f libavogadro/src/engines/CMakeFiles/forceengine.dir/build.make libavogadro/src/engines/CMakeFiles/forceengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Generating moc_forceengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_forceengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/forceengine.dir/DependInfo.cmake --color= Scanning dependencies of target forceengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/forceengine.dir/build.make libavogadro/src/engines/CMakeFiles/forceengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 53 [ 26%] Building CXX object libavogadro/src/engines/CMakeFiles/forceengine.dir/forceengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforceengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/forceengine.dir/forceengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/forceengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/forceengine.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/forceengine.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 26%] Building CXX object libavogadro/src/engines/CMakeFiles/forceengine.dir/moc_forceengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforceengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/forceengine.dir/moc_forceengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_forceengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/forceengine.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_forceengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/forceengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/forceengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,forceengine.so -o ../../../lib/forceengine.so CMakeFiles/forceengine.dir/forceengine.cpp.o CMakeFiles/forceengine.dir/moc_forceengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 53 [ 26%] Built target forceengine make -f libavogadro/src/engines/CMakeFiles/hbondengine.dir/build.make libavogadro/src/engines/CMakeFiles/hbondengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 26%] Generating ui_hbondsettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_hbondsettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/hbondsettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 26%] Generating moc_hbondengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_hbondengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/hbondengine.dir/DependInfo.cmake --color= Scanning dependencies of target hbondengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/hbondengine.dir/build.make libavogadro/src/engines/CMakeFiles/hbondengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 26%] Building CXX object libavogadro/src/engines/CMakeFiles/hbondengine.dir/hbondengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dhbondengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/hbondengine.dir/hbondengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/hbondengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/hbondengine.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/hbondengine.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 26%] Building CXX object libavogadro/src/engines/CMakeFiles/hbondengine.dir/moc_hbondengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dhbondengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/hbondengine.dir/moc_hbondengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_hbondengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/hbondengine.h:30, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_hbondengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/hbondengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/hbondengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,hbondengine.so -o ../../../lib/hbondengine.so CMakeFiles/hbondengine.dir/hbondengine.cpp.o CMakeFiles/hbondengine.dir/moc_hbondengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 26%] Built target hbondengine make -f libavogadro/src/engines/CMakeFiles/labelengine.dir/build.make libavogadro/src/engines/CMakeFiles/labelengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 26%] Generating ui_labelsettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_labelsettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/labelsettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 26%] Generating moc_labelengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_labelengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/labelengine.dir/DependInfo.cmake --color= Scanning dependencies of target labelengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/labelengine.dir/build.make libavogadro/src/engines/CMakeFiles/labelengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 67 [ 27%] Building CXX object libavogadro/src/engines/CMakeFiles/labelengine.dir/labelengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dlabelengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/labelengine.dir/labelengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/labelengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/labelengine.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/labelengine.cpp:28: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 27%] Building CXX object libavogadro/src/engines/CMakeFiles/labelengine.dir/moc_labelengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dlabelengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/labelengine.dir/moc_labelengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_labelengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/labelengine.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_labelengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/labelengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/labelengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,labelengine.so -o ../../../lib/labelengine.so CMakeFiles/labelengine.dir/labelengine.cpp.o CMakeFiles/labelengine.dir/moc_labelengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 67 [ 27%] Built target labelengine make -f libavogadro/src/engines/CMakeFiles/polygonengine.dir/build.make libavogadro/src/engines/CMakeFiles/polygonengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 27%] Generating moc_polygonengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_polygonengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/polygonengine.dir/DependInfo.cmake --color= Scanning dependencies of target polygonengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/polygonengine.dir/build.make libavogadro/src/engines/CMakeFiles/polygonengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 27%] Building CXX object libavogadro/src/engines/CMakeFiles/polygonengine.dir/polygonengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpolygonengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/polygonengine.dir/polygonengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/polygonengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/polygonengine.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/polygonengine.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 73 [ 28%] Building CXX object libavogadro/src/engines/CMakeFiles/polygonengine.dir/moc_polygonengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpolygonengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/polygonengine.dir/moc_polygonengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_polygonengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/polygonengine.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_polygonengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/polygonengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/polygonengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,polygonengine.so -o ../../../lib/polygonengine.so CMakeFiles/polygonengine.dir/polygonengine.cpp.o CMakeFiles/polygonengine.dir/moc_polygonengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 73 [ 28%] Built target polygonengine make -f libavogadro/src/engines/CMakeFiles/qtaimengine.dir/build.make libavogadro/src/engines/CMakeFiles/qtaimengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 28%] Generating ui_qtaimsettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_qtaimsettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/qtaimsettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 28%] Generating moc_qtaimengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_qtaimengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/qtaimengine.dir/DependInfo.cmake --color= Scanning dependencies of target qtaimengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/qtaimengine.dir/build.make libavogadro/src/engines/CMakeFiles/qtaimengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 28%] Building CXX object libavogadro/src/engines/CMakeFiles/qtaimengine.dir/qtaimengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dqtaimengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/qtaimengine.dir/qtaimengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/qtaimengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/qtaimengine.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/qtaimengine.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 28%] Building CXX object libavogadro/src/engines/CMakeFiles/qtaimengine.dir/moc_qtaimengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dqtaimengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/qtaimengine.dir/moc_qtaimengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_qtaimengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/qtaimengine.h:30, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_qtaimengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/qtaimengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/qtaimengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,qtaimengine.so -o ../../../lib/qtaimengine.so CMakeFiles/qtaimengine.dir/qtaimengine.cpp.o CMakeFiles/qtaimengine.dir/moc_qtaimengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 28%] Built target qtaimengine make -f libavogadro/src/engines/CMakeFiles/ribbonengine.dir/build.make libavogadro/src/engines/CMakeFiles/ribbonengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 28%] Generating ui_ribbonsettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_ribbonsettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/ribbonsettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 28%] Generating moc_ribbonengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_ribbonengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/ribbonengine.dir/DependInfo.cmake --color= Scanning dependencies of target ribbonengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/ribbonengine.dir/build.make libavogadro/src/engines/CMakeFiles/ribbonengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 83 [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/ribbonengine.dir/ribbonengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dribbonengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/ribbonengine.dir/ribbonengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/ribbonengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/ribbonengine.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/ribbonengine.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/ribbonengine.dir/moc_ribbonengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dribbonengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/ribbonengine.dir/moc_ribbonengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_ribbonengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/ribbonengine.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_ribbonengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/ribbonengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/ribbonengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,ribbonengine.so -o ../../../lib/ribbonengine.so CMakeFiles/ribbonengine.dir/ribbonengine.cpp.o CMakeFiles/ribbonengine.dir/moc_ribbonengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 83 [ 29%] Built target ribbonengine make -f libavogadro/src/engines/CMakeFiles/ringengine.dir/build.make libavogadro/src/engines/CMakeFiles/ringengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Generating ui_ringsettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_ringsettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/ringsettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Generating moc_ringengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_ringengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/ringengine.dir/DependInfo.cmake --color= Scanning dependencies of target ringengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/ringengine.dir/build.make libavogadro/src/engines/CMakeFiles/ringengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/ringengine.dir/ringengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dringengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/ringengine.dir/ringengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/ringengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/ringengine.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/ringengine.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/ringengine.dir/moc_ringengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dringengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/ringengine.dir/moc_ringengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_ringengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/ringengine.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_ringengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/ringengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/ringengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,ringengine.so -o ../../../lib/ringengine.so CMakeFiles/ringengine.dir/ringengine.cpp.o CMakeFiles/ringengine.dir/moc_ringengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Built target ringengine make -f libavogadro/src/engines/CMakeFiles/simplewireengine.dir/build.make libavogadro/src/engines/CMakeFiles/simplewireengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Generating moc_simplewireengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_simplewireengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/simplewireengine.dir/DependInfo.cmake --color= Scanning dependencies of target simplewireengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/simplewireengine.dir/build.make libavogadro/src/engines/CMakeFiles/simplewireengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/simplewireengine.dir/simplewireengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsimplewireengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/simplewireengine.dir/simplewireengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/simplewireengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/simplewireengine.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/simplewireengine.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/simplewireengine.dir/moc_simplewireengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsimplewireengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/simplewireengine.dir/moc_simplewireengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_simplewireengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/simplewireengine.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_simplewireengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/simplewireengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/simplewireengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,simplewireengine.so -o ../../../lib/simplewireengine.so CMakeFiles/simplewireengine.dir/simplewireengine.cpp.o CMakeFiles/simplewireengine.dir/moc_simplewireengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Built target simplewireengine make -f libavogadro/src/engines/CMakeFiles/sphereengine.dir/build.make libavogadro/src/engines/CMakeFiles/sphereengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 92 [ 30%] Generating ui_spheresettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_spheresettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/spheresettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 30%] Generating moc_sphereengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_sphereengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/sphereengine.dir/DependInfo.cmake --color= Scanning dependencies of target sphereengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/sphereengine.dir/build.make libavogadro/src/engines/CMakeFiles/sphereengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 30%] Building CXX object libavogadro/src/engines/CMakeFiles/sphereengine.dir/sphereengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsphereengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/sphereengine.dir/sphereengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/sphereengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/sphereengine.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/sphereengine.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 30%] Building CXX object libavogadro/src/engines/CMakeFiles/sphereengine.dir/moc_sphereengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsphereengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/sphereengine.dir/moc_sphereengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_sphereengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/sphereengine.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_sphereengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/sphereengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/sphereengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,sphereengine.so -o ../../../lib/sphereengine.so CMakeFiles/sphereengine.dir/sphereengine.cpp.o CMakeFiles/sphereengine.dir/moc_sphereengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 92 [ 30%] Built target sphereengine make -f libavogadro/src/engines/CMakeFiles/stickengine.dir/build.make libavogadro/src/engines/CMakeFiles/stickengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 30%] Generating ui_sticksettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_sticksettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/sticksettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 30%] Generating moc_stickengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_stickengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/stickengine.dir/DependInfo.cmake --color= Scanning dependencies of target stickengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/stickengine.dir/build.make libavogadro/src/engines/CMakeFiles/stickengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 30%] Building CXX object libavogadro/src/engines/CMakeFiles/stickengine.dir/stickengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dstickengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/stickengine.dir/stickengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/stickengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/stickengine.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/stickengine.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 30%] Building CXX object libavogadro/src/engines/CMakeFiles/stickengine.dir/moc_stickengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dstickengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/stickengine.dir/moc_stickengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_stickengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/stickengine.h:30, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_stickengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/stickengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/stickengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,stickengine.so -o ../../../lib/stickengine.so CMakeFiles/stickengine.dir/stickengine.cpp.o CMakeFiles/stickengine.dir/moc_stickengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 30%] Built target stickengine make -f libavogadro/src/engines/CMakeFiles/surfaceengine.dir/build.make libavogadro/src/engines/CMakeFiles/surfaceengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 30%] Generating ui_surfacesettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_surfacesettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/surfacesettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 30%] Generating moc_surfaceengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_surfaceengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/surfaceengine.dir/DependInfo.cmake --color= Scanning dependencies of target surfaceengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/surfaceengine.dir/build.make libavogadro/src/engines/CMakeFiles/surfaceengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 94 [ 31%] Building CXX object libavogadro/src/engines/CMakeFiles/surfaceengine.dir/surfaceengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsurfaceengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/surfaceengine.dir/surfaceengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/surfaceengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/surfaceengine.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/surfaceengine.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 31%] Building CXX object libavogadro/src/engines/CMakeFiles/surfaceengine.dir/moc_surfaceengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsurfaceengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/surfaceengine.dir/moc_surfaceengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_surfaceengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/surfaceengine.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_surfaceengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/surfaceengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/surfaceengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,surfaceengine.so -o ../../../lib/surfaceengine.so CMakeFiles/surfaceengine.dir/surfaceengine.cpp.o CMakeFiles/surfaceengine.dir/moc_surfaceengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 94 [ 31%] Built target surfaceengine make -f libavogadro/src/engines/CMakeFiles/wireengine.dir/build.make libavogadro/src/engines/CMakeFiles/wireengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 31%] Generating ui_wiresettingswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/ui_wiresettingswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/engines/wiresettingswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 31%] Generating moc_wireengine.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_wireengine.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/wireengine.dir/DependInfo.cmake --color= Scanning dependencies of target wireengine make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/wireengine.dir/build.make libavogadro/src/engines/CMakeFiles/wireengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 31%] Building CXX object libavogadro/src/engines/CMakeFiles/wireengine.dir/wireengine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dwireengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/wireengine.dir/wireengine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/engines/wireengine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/wireengine.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/engines/wireengine.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 100 [ 32%] Building CXX object libavogadro/src/engines/CMakeFiles/wireengine.dir/moc_wireengine.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dwireengine_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines -o CMakeFiles/wireengine.dir/moc_wireengine.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_wireengine.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/../../../../libavogadro/src/engines/wireengine.h:30, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/moc_wireengine.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/wireengine.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines && /usr/bin/cmake -E cmake_link_script CMakeFiles/wireengine.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,wireengine.so -o ../../../lib/wireengine.so CMakeFiles/wireengine.dir/wireengine.cpp.o CMakeFiles/wireengine.dir/moc_wireengine.cxx.o -L/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/.. ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/..:/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 100 [ 32%] Built target wireengine make -f libavogadro/src/tools/CMakeFiles/aligntool.dir/build.make libavogadro/src/tools/CMakeFiles/aligntool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 32%] Generating qrc_aligntool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name aligntool -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_aligntool.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/tools/aligntool.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 32%] Generating moc_aligntool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_aligntool.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/aligntool.dir/DependInfo.cmake --color= Scanning dependencies of target aligntool make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/aligntool.dir/build.make libavogadro/src/tools/CMakeFiles/aligntool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 32%] Building CXX object libavogadro/src/tools/CMakeFiles/aligntool.dir/aligntool.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Daligntool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/aligntool.dir/aligntool.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/aligntool.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/navigate.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/aligntool.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/tools/aligntool.cpp: In member function 'void Avogadro::AlignTool::align()': /build/buildd/avogadro-1.1.0/libavogadro/src/tools/aligntool.cpp:254:14: warning: variable 'alpha' set but not used [-Wunused-but-set-variable] double alpha, beta, gamma; ^ In file included from /usr/include/eigen2/Eigen/Core:136:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/navigate.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/aligntool.cpp:27: /usr/include/eigen2/Eigen/src/Core/Dot.h:89:53: warning: '*((void*)& axis +16)' may be used uninitialized in this function [-Wmaybe-uninitialized] return v1.coeff(Start) * ei_conj(v2.coeff(Start)); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/tools/aligntool.cpp:259:16: note: '*((void*)& axis +16)' was declared here Vector3d axis; ^ In file included from /usr/include/eigen2/Eigen/Core:136:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/navigate.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/aligntool.cpp:27: /usr/include/eigen2/Eigen/src/Core/Dot.h:89:53: warning: '*((void*)& axis +8)' may be used uninitialized in this function [-Wmaybe-uninitialized] return v1.coeff(Start) * ei_conj(v2.coeff(Start)); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/tools/aligntool.cpp:259:16: note: '*((void*)& axis +8)' was declared here Vector3d axis; ^ In file included from /usr/include/eigen2/Eigen/Core:136:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/navigate.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/aligntool.cpp:27: /usr/include/eigen2/Eigen/src/Core/Dot.h:89:53: warning: 'axis' may be used uninitialized in this function [-Wmaybe-uninitialized] return v1.coeff(Start) * ei_conj(v2.coeff(Start)); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/tools/aligntool.cpp:259:16: note: 'axis' was declared here Vector3d axis; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 32%] Building CXX object libavogadro/src/tools/CMakeFiles/aligntool.dir/moc_aligntool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Daligntool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/aligntool.dir/moc_aligntool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_aligntool.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 32%] Building CXX object libavogadro/src/tools/CMakeFiles/aligntool.dir/qrc_aligntool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Daligntool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/aligntool.dir/qrc_aligntool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_aligntool.cxx Linking CXX shared module ../../../lib/aligntool.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/aligntool.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,aligntool.so -o ../../../lib/aligntool.so CMakeFiles/aligntool.dir/aligntool.cpp.o CMakeFiles/aligntool.dir/moc_aligntool.cxx.o CMakeFiles/aligntool.dir/qrc_aligntool.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 32%] Built target aligntool make -f libavogadro/src/tools/CMakeFiles/autoopttool.dir/build.make libavogadro/src/tools/CMakeFiles/autoopttool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 32%] Generating qrc_autoopttool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name autoopttool -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_autoopttool.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/tools/autoopttool.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 32%] Generating moc_autoopttool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_autoopttool.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/autoopttool.dir/DependInfo.cmake --color= Scanning dependencies of target autoopttool make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/autoopttool.dir/build.make libavogadro/src/tools/CMakeFiles/autoopttool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 32%] Building CXX object libavogadro/src/tools/CMakeFiles/autoopttool.dir/autoopttool.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dautoopttool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/autoopttool.dir/autoopttool.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/autoopttool.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/autoopttool.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/autoopttool.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/tools/autoopttool.cpp: In member function 'virtual QUndoCommand* Avogadro::AutoOptTool::mouseMoveEvent(Avogadro::GLWidget*, QMouseEvent*)': /build/buildd/avogadro-1.1.0/libavogadro/src/tools/autoopttool.cpp:198:12: warning: variable 'deltaDragging' set but not used [-Wunused-but-set-variable] QPoint deltaDragging = event->pos() - m_lastDraggingPosition; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 5 [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/autoopttool.dir/moc_autoopttool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dautoopttool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/autoopttool.dir/moc_autoopttool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_autoopttool.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/autoopttool.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_autoopttool.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/autoopttool.dir/qrc_autoopttool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dautoopttool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/autoopttool.dir/qrc_autoopttool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_autoopttool.cxx Linking CXX shared module ../../../lib/autoopttool.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/autoopttool.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,autoopttool.so -o ../../../lib/autoopttool.so CMakeFiles/autoopttool.dir/autoopttool.cpp.o CMakeFiles/autoopttool.dir/moc_autoopttool.cxx.o CMakeFiles/autoopttool.dir/qrc_autoopttool.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 5 [ 33%] Built target autoopttool make -f libavogadro/src/tools/CMakeFiles/autorotatetool.dir/build.make libavogadro/src/tools/CMakeFiles/autorotatetool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Generating qrc_autorotatetool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name autorotatetool -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_autorotatetool.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/tools/autorotatetool.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Generating moc_autorotatetool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_autorotatetool.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/autorotatetool.dir/DependInfo.cmake --color= Scanning dependencies of target autorotatetool make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/autorotatetool.dir/build.make libavogadro/src/tools/CMakeFiles/autorotatetool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/autorotatetool.dir/autorotatetool.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dautorotatetool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/autorotatetool.dir/autorotatetool.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/autorotatetool.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/autorotatetool.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/autorotatetool.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/autorotatetool.dir/moc_autorotatetool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dautorotatetool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/autorotatetool.dir/moc_autorotatetool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_autorotatetool.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/autorotatetool.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_autorotatetool.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/autorotatetool.dir/qrc_autorotatetool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dautorotatetool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/autorotatetool.dir/qrc_autorotatetool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_autorotatetool.cxx Linking CXX shared module ../../../lib/autorotatetool.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/autorotatetool.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,autorotatetool.so -o ../../../lib/autorotatetool.so CMakeFiles/autorotatetool.dir/autorotatetool.cpp.o CMakeFiles/autorotatetool.dir/moc_autorotatetool.cxx.o CMakeFiles/autorotatetool.dir/qrc_autorotatetool.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Built target autorotatetool make -f libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/build.make libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Generating qrc_bondcentrictool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name bondcentrictool -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_bondcentrictool.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/tools/bondcentrictool.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Generating moc_bondcentrictool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_bondcentrictool.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Generating moc_skeletontree.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_skeletontree.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/DependInfo.cmake --color= Scanning dependencies of target bondcentrictool make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/build.make libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/bondcentrictool.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dbondcentrictool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/bondcentrictool.dir/bondcentrictool.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/bondcentrictool.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/skeletontree.h:36, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/bondcentrictool.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/bondcentrictool.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ In file included from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/bondcentrictool.cpp:29:0: /build/buildd/avogadro-1.1.0/libavogadro/src/tools/bondcentrictool.h: At global scope: /build/buildd/avogadro-1.1.0/libavogadro/src/tools/bondcentrictool.h:81:29: warning: unused parameter 'widget' [-Wunused-parameter] virtual QUndoCommand* mouseDoubleClickEvent(GLWidget *widget, QMouseEvent *event) { return 0;} ^ /build/buildd/avogadro-1.1.0/libavogadro/src/tools/bondcentrictool.h:81:29: warning: unused parameter 'event' [-Wunused-parameter] /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/skeletontree.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dbondcentrictool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/bondcentrictool.dir/skeletontree.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/skeletontree.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/skeletontree.h:36, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/skeletontree.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/moc_bondcentrictool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dbondcentrictool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/bondcentrictool.dir/moc_bondcentrictool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_bondcentrictool.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/skeletontree.h:36, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/bondcentrictool.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_bondcentrictool.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ In file included from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_bondcentrictool.cxx:10:0: /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/bondcentrictool.h: At global scope: /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/bondcentrictool.h:81:29: warning: unused parameter 'widget' [-Wunused-parameter] virtual QUndoCommand* mouseDoubleClickEvent(GLWidget *widget, QMouseEvent *event) { return 0;} ^ /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/bondcentrictool.h:81:29: warning: unused parameter 'event' [-Wunused-parameter] /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/moc_skeletontree.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dbondcentrictool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/bondcentrictool.dir/moc_skeletontree.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_skeletontree.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/skeletontree.h:36, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_skeletontree.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/qrc_bondcentrictool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dbondcentrictool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/bondcentrictool.dir/qrc_bondcentrictool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_bondcentrictool.cxx Linking CXX shared module ../../../lib/bondcentrictool.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/bondcentrictool.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,bondcentrictool.so -o ../../../lib/bondcentrictool.so CMakeFiles/bondcentrictool.dir/bondcentrictool.cpp.o CMakeFiles/bondcentrictool.dir/skeletontree.cpp.o CMakeFiles/bondcentrictool.dir/moc_bondcentrictool.cxx.o CMakeFiles/bondcentrictool.dir/moc_skeletontree.cxx.o CMakeFiles/bondcentrictool.dir/qrc_bondcentrictool.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Built target bondcentrictool make -f libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/build.make libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Generating qrc_clickmeasuretool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name clickmeasuretool -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_clickmeasuretool.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/tools/clickmeasuretool.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Generating moc_clickmeasuretool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_clickmeasuretool.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/DependInfo.cmake --color= Scanning dependencies of target clickmeasuretool make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/build.make libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/clickmeasuretool.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dclickmeasuretool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/clickmeasuretool.dir/clickmeasuretool.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/clickmeasuretool.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/clickmeasuretool.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/clickmeasuretool.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ In file included from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/clickmeasuretool.cpp:26:0: /build/buildd/avogadro-1.1.0/libavogadro/src/tools/clickmeasuretool.h: At global scope: /build/buildd/avogadro-1.1.0/libavogadro/src/tools/clickmeasuretool.h:66:29: warning: unused parameter 'widget' [-Wunused-parameter] virtual QUndoCommand* mouseDoubleClickEvent(GLWidget *widget, QMouseEvent *event) { return 0; } ^ /build/buildd/avogadro-1.1.0/libavogadro/src/tools/clickmeasuretool.h:66:29: warning: unused parameter 'event' [-Wunused-parameter] /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/moc_clickmeasuretool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dclickmeasuretool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/clickmeasuretool.dir/moc_clickmeasuretool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_clickmeasuretool.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/clickmeasuretool.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_clickmeasuretool.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ In file included from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_clickmeasuretool.cxx:10:0: /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/clickmeasuretool.h: At global scope: /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/clickmeasuretool.h:66:29: warning: unused parameter 'widget' [-Wunused-parameter] virtual QUndoCommand* mouseDoubleClickEvent(GLWidget *widget, QMouseEvent *event) { return 0; } ^ /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/clickmeasuretool.h:66:29: warning: unused parameter 'event' [-Wunused-parameter] /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Building CXX object libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/qrc_clickmeasuretool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dclickmeasuretool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/clickmeasuretool.dir/qrc_clickmeasuretool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_clickmeasuretool.cxx Linking CXX shared module ../../../lib/clickmeasuretool.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/clickmeasuretool.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,clickmeasuretool.so -o ../../../lib/clickmeasuretool.so CMakeFiles/clickmeasuretool.dir/clickmeasuretool.cpp.o CMakeFiles/clickmeasuretool.dir/moc_clickmeasuretool.cxx.o CMakeFiles/clickmeasuretool.dir/qrc_clickmeasuretool.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Built target clickmeasuretool make -f libavogadro/src/tools/CMakeFiles/drawtool.dir/build.make libavogadro/src/tools/CMakeFiles/drawtool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Generating qrc_drawtool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name drawtool -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_drawtool.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/tools/drawtool.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 51 [ 34%] Generating moc_drawtool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_drawtool.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/drawtool.dir/DependInfo.cmake --color= Scanning dependencies of target drawtool make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/drawtool.dir/build.make libavogadro/src/tools/CMakeFiles/drawtool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 34%] Building CXX object libavogadro/src/tools/CMakeFiles/drawtool.dir/drawtool.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Ddrawtool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/drawtool.dir/drawtool.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/drawtool.cpp In file included from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/drawtool.cpp:28:0: /build/buildd/avogadro-1.1.0/libavogadro/src/tools/drawtool.h:76:29: warning: unused parameter 'widget' [-Wunused-parameter] virtual QUndoCommand* mouseDoubleClickEvent(GLWidget *widget, QMouseEvent *event) { return 0; } ^ /build/buildd/avogadro-1.1.0/libavogadro/src/tools/drawtool.h:76:29: warning: unused parameter 'event' [-Wunused-parameter] In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/drawcommand.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/drawtool.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 34%] Building CXX object libavogadro/src/tools/CMakeFiles/drawtool.dir/drawcommand.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Ddrawtool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/drawtool.dir/drawcommand.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/drawcommand.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/drawcommand.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/drawcommand.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 34%] Building CXX object libavogadro/src/tools/CMakeFiles/drawtool.dir/moc_drawtool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Ddrawtool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/drawtool.dir/moc_drawtool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_drawtool.cxx In file included from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_drawtool.cxx:10:0: /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/drawtool.h:76:29: warning: unused parameter 'widget' [-Wunused-parameter] virtual QUndoCommand* mouseDoubleClickEvent(GLWidget *widget, QMouseEvent *event) { return 0; } ^ /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/drawtool.h:76:29: warning: unused parameter 'event' [-Wunused-parameter] /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 34%] Building CXX object libavogadro/src/tools/CMakeFiles/drawtool.dir/qrc_drawtool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Ddrawtool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/drawtool.dir/qrc_drawtool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_drawtool.cxx Linking CXX shared module ../../../lib/drawtool.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/drawtool.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,drawtool.so -o ../../../lib/drawtool.so CMakeFiles/drawtool.dir/drawtool.cpp.o CMakeFiles/drawtool.dir/drawcommand.cpp.o CMakeFiles/drawtool.dir/moc_drawtool.cxx.o CMakeFiles/drawtool.dir/qrc_drawtool.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 51 [ 34%] Built target drawtool make -f libavogadro/src/tools/CMakeFiles/manipulatetool.dir/build.make libavogadro/src/tools/CMakeFiles/manipulatetool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 34%] Generating qrc_manipulatetool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name manipulatetool -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_manipulatetool.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/tools/manipulatetool.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 34%] Generating moc_manipulatetool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_manipulatetool.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/manipulatetool.dir/DependInfo.cmake --color= Scanning dependencies of target manipulatetool make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/manipulatetool.dir/build.make libavogadro/src/tools/CMakeFiles/manipulatetool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 34%] Building CXX object libavogadro/src/tools/CMakeFiles/manipulatetool.dir/manipulatetool.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dmanipulatetool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/manipulatetool.dir/manipulatetool.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/manipulatetool.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/manipulatetool.h:27, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/manipulatetool.cpp:24: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 34%] Building CXX object libavogadro/src/tools/CMakeFiles/manipulatetool.dir/eyecandy.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dmanipulatetool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/manipulatetool.dir/eyecandy.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/eyecandy.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/eyecandy.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/eyecandy.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 34%] Building CXX object libavogadro/src/tools/CMakeFiles/manipulatetool.dir/moveatomcommand.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dmanipulatetool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/manipulatetool.dir/moveatomcommand.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/moveatomcommand.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/moveatomcommand.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/moveatomcommand.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 34%] Building CXX object libavogadro/src/tools/CMakeFiles/manipulatetool.dir/moc_manipulatetool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dmanipulatetool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/manipulatetool.dir/moc_manipulatetool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_manipulatetool.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/manipulatetool.h:27, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_manipulatetool.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 68 [ 35%] Building CXX object libavogadro/src/tools/CMakeFiles/manipulatetool.dir/qrc_manipulatetool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dmanipulatetool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/manipulatetool.dir/qrc_manipulatetool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_manipulatetool.cxx Linking CXX shared module ../../../lib/manipulatetool.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/manipulatetool.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,manipulatetool.so -o ../../../lib/manipulatetool.so CMakeFiles/manipulatetool.dir/manipulatetool.cpp.o CMakeFiles/manipulatetool.dir/eyecandy.cpp.o CMakeFiles/manipulatetool.dir/moveatomcommand.cpp.o CMakeFiles/manipulatetool.dir/moc_manipulatetool.cxx.o CMakeFiles/manipulatetool.dir/qrc_manipulatetool.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 68 [ 35%] Built target manipulatetool make -f libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/build.make libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 35%] Generating qrc_selectrotatetool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name selectrotatetool -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_selectrotatetool.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/tools/selectrotatetool.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 84 [ 36%] Generating moc_selectrotatetool.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_selectrotatetool.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/DependInfo.cmake --color= Scanning dependencies of target selectrotatetool make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/build.make libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 36%] Building CXX object libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/selectrotatetool.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dselectrotatetool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/selectrotatetool.dir/selectrotatetool.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/selectrotatetool.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/selectrotatetool.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/selectrotatetool.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/tools/selectrotatetool.cpp: In member function 'virtual QUndoCommand* Avogadro::SelectRotateTool::mouseMoveEvent(Avogadro::GLWidget*, QMouseEvent*)': /build/buildd/avogadro-1.1.0/libavogadro/src/tools/selectrotatetool.cpp:392:14: warning: variable 'deltaDragging' set but not used [-Wunused-but-set-variable] QPoint deltaDragging = event->pos() - m_lastDraggingPosition; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 36%] Building CXX object libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/moc_selectrotatetool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dselectrotatetool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/selectrotatetool.dir/moc_selectrotatetool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_selectrotatetool.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/../../../../libavogadro/src/tools/selectrotatetool.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/moc_selectrotatetool.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 36%] Building CXX object libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/qrc_selectrotatetool.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dselectrotatetool_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools -o CMakeFiles/selectrotatetool.dir/qrc_selectrotatetool.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/qrc_selectrotatetool.cxx Linking CXX shared module ../../../lib/selectrotatetool.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/selectrotatetool.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,selectrotatetool.so -o ../../../lib/selectrotatetool.so CMakeFiles/selectrotatetool.dir/selectrotatetool.cpp.o CMakeFiles/selectrotatetool.dir/moc_selectrotatetool.cxx.o CMakeFiles/selectrotatetool.dir/qrc_selectrotatetool.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 84 [ 36%] Built target selectrotatetool make -f libavogadro/src/extensions/CMakeFiles/animationextension.dir/build.make libavogadro/src/extensions/CMakeFiles/animationextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 36%] Generating qrc_animationextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name animationextension -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qrc_animationextension.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/animationextension.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 36%] Generating moc_animationextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_animationextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 3 [ 37%] Generating moc_animationdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_animationdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 37%] Generating ui_animationdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_animationdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/animationdialog.ui cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/animationextension.dir/DependInfo.cmake --color= Scanning dependencies of target animationextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/animationextension.dir/build.make libavogadro/src/extensions/CMakeFiles/animationextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 37%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/animationextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Danimationextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/animationextension.dir/animationextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/animationextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/trajvideomaker.h:25, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/animationextension.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 37%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/animationdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Danimationextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/animationextension.dir/animationdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/animationdialog.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 37%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/povpainter.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Danimationextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/animationextension.dir/povpainter.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povpainter.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/painter.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povpainter.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povpainter.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 37%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/trajvideomaker.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Danimationextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/animationextension.dir/trajvideomaker.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/trajvideomaker.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/trajvideomaker.h:25, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/trajvideomaker.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 37%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/moc_animationextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Danimationextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/animationextension.dir/moc_animationextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_animationextension.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 4 [ 38%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/moc_animationdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Danimationextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/animationextension.dir/moc_animationdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_animationdialog.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 38%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/qrc_animationextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Danimationextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/animationextension.dir/qrc_animationextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qrc_animationextension.cxx Linking CXX shared module ../../../lib/animationextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/animationextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,animationextension.so -o ../../../lib/animationextension.so CMakeFiles/animationextension.dir/animationextension.cpp.o CMakeFiles/animationextension.dir/animationdialog.cpp.o CMakeFiles/animationextension.dir/povpainter.cpp.o CMakeFiles/animationextension.dir/trajvideomaker.cpp.o CMakeFiles/animationextension.dir/moc_animationextension.cxx.o CMakeFiles/animationextension.dir/moc_animationdialog.cxx.o CMakeFiles/animationextension.dir/qrc_animationextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 3 4 [ 38%] Built target animationextension make -f libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/build.make libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 38%] Generating qrc_cartesianextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name cartesianextension -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qrc_cartesianextension.cxx /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/cartesianextension.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 38%] Generating moc_cartesianextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_cartesianextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 38%] Generating ui_cartesianeditor.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_cartesianeditor.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/cartesianeditor.ui cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/DependInfo.cmake --color= Scanning dependencies of target cartesianextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/build.make libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 38%] Building CXX object libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/cartesianextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcartesianextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/cartesianextension.dir/cartesianextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/cartesianextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/cartesianextension.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/cartesianextension.cpp: In member function 'bool Avogadro::CartesianEditor::parseText(OpenBabel::OBMol*)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/cartesianextension.cpp:199:9: warning: variable 'a' set but not used [-Wunused-but-set-variable] int a; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 43 [ 39%] Building CXX object libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/moc_cartesianextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcartesianextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/cartesianextension.dir/moc_cartesianextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_cartesianextension.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Building CXX object libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/qrc_cartesianextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcartesianextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/cartesianextension.dir/qrc_cartesianextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qrc_cartesianextension.cxx Linking CXX shared module ../../../lib/cartesianextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/cartesianextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,cartesianextension.so -o ../../../lib/cartesianextension.so CMakeFiles/cartesianextension.dir/cartesianextension.cpp.o CMakeFiles/cartesianextension.dir/moc_cartesianextension.cxx.o CMakeFiles/cartesianextension.dir/qrc_cartesianextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 43 [ 39%] Built target cartesianextension make -f libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/build.make libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Generating ui_fileimportdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_fileimportdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/fileimportdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Generating moc_fileimportextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_fileimportextension.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/DependInfo.cmake --color= Scanning dependencies of target fileimportextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/build.make libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Building CXX object libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/fileimportextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dfileimportextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/fileimportextension.dir/fileimportextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/fileimportextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/fileimportextension.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/fileimportextension.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Building CXX object libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/moc_fileimportextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dfileimportextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/fileimportextension.dir/moc_fileimportextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_fileimportextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/fileimportextension.h:30, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_fileimportextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/fileimportextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileimportextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,fileimportextension.so -o ../../../lib/fileimportextension.so CMakeFiles/fileimportextension.dir/fileimportextension.cpp.o CMakeFiles/fileimportextension.dir/moc_fileimportextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Built target fileimportextension make -f libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/build.make libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Generating ui_conformersearchdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_conformersearchdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/conformersearchdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Generating moc_forcefieldextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_forcefieldextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Generating moc_forcefielddialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_forcefielddialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Generating moc_constraintsdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_constraintsdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Generating moc_constraintsmodel.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_constraintsmodel.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Generating moc_conformersearchdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_conformersearchdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Generating ui_forcefielddialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_forcefielddialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/forcefielddialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 54 [ 40%] Generating ui_constraintsdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_constraintsdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/constraintsdialog.ui cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/DependInfo.cmake --color= Scanning dependencies of target forcefieldextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/build.make libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 40%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/forcefieldextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforcefieldextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/forcefieldextension.dir/forcefieldextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/forcefieldextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/conformersearchdialog.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/forcefieldextension.h:27, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/forcefieldextension.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ In file included from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/forcefieldextension.cpp:31:0: /usr/include/openbabel-2.0/openbabel/conformersearch.h: At global scope: /usr/include/openbabel-2.0/openbabel/conformersearch.h:52:15: warning: 'class OpenBabel::OBConformerFilter' has virtual functions and accessible non-virtual destructor [-Wnon-virtual-dtor] class OBAPI OBConformerFilter ^ /usr/include/openbabel-2.0/openbabel/conformersearch.h:76:15: warning: 'class OpenBabel::OBConformerFilters' has virtual functions and accessible non-virtual destructor [-Wnon-virtual-dtor] class OBAPI OBConformerFilters : public OBConformerFilter ^ /usr/include/openbabel-2.0/openbabel/conformersearch.h:109:15: warning: 'class OpenBabel::OBStericConformerFilter' has virtual functions and accessible non-virtual destructor [-Wnon-virtual-dtor] class OBAPI OBStericConformerFilter : public OBConformerFilter ^ /usr/include/openbabel-2.0/openbabel/conformersearch.h:137:15: warning: 'class OpenBabel::OBConformerScore' has virtual functions and accessible non-virtual destructor [-Wnon-virtual-dtor] class OBAPI OBConformerScore ^ /usr/include/openbabel-2.0/openbabel/conformersearch.h:171:15: warning: 'class OpenBabel::OBRMSDConformerScore' has virtual functions and accessible non-virtual destructor [-Wnon-virtual-dtor] class OBAPI OBRMSDConformerScore : public OBConformerScore ^ /usr/include/openbabel-2.0/openbabel/conformersearch.h:185:15: warning: 'class OpenBabel::OBEnergyConformerScore' has virtual functions and accessible non-virtual destructor [-Wnon-virtual-dtor] class OBAPI OBEnergyConformerScore : public OBConformerScore ^ /usr/include/openbabel-2.0/openbabel/conformersearch.h: In member function 'void OpenBabel::OBConformerSearch::SetFilter(OpenBabel::OBConformerFilter*)': /usr/include/openbabel-2.0/openbabel/conformersearch.h:260:16: warning: deleting object of abstract class type 'OpenBabel::OBConformerFilter' which has non-virtual destructor will cause undefined behaviour [-Wdelete-non-virtual-dtor] delete m_filter; ^ /usr/include/openbabel-2.0/openbabel/conformersearch.h: In member function 'void OpenBabel::OBConformerSearch::SetScore(OpenBabel::OBConformerScore*)': /usr/include/openbabel-2.0/openbabel/conformersearch.h:274:16: warning: deleting object of abstract class type 'OpenBabel::OBConformerScore' which has non-virtual destructor will cause undefined behaviour [-Wdelete-non-virtual-dtor] delete m_score; ^ In file included from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/forcefieldextension.cpp:31:0: /usr/include/openbabel-2.0/openbabel/conformersearch.h: At global scope: /usr/include/openbabel-2.0/openbabel/conformersearch.h:430:2: warning: extra ';' [-Wpedantic] }; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 40%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/forcefielddialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforcefieldextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/forcefieldextension.dir/forcefielddialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/forcefielddialog.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 40%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/constraintsdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforcefieldextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/forcefieldextension.dir/constraintsdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/constraintsdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/constraintsmodel.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/constraintsdialog.h:25, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/constraintsdialog.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 40%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/constraintsmodel.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforcefieldextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/forcefieldextension.dir/constraintsmodel.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/constraintsmodel.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/constraintsmodel.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/constraintsmodel.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 40%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/conformersearchdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforcefieldextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/forcefieldextension.dir/conformersearchdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/conformersearchdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/conformersearchdialog.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/conformersearchdialog.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 40%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/moc_forcefieldextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforcefieldextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/forcefieldextension.dir/moc_forcefieldextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_forcefieldextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/conformersearchdialog.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/forcefieldextension.h:27, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_forcefieldextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 55 [ 41%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/moc_forcefielddialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforcefieldextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/forcefieldextension.dir/moc_forcefielddialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_forcefielddialog.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 41%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/moc_constraintsdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforcefieldextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/forcefieldextension.dir/moc_constraintsdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_constraintsdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/constraintsmodel.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/constraintsdialog.h:25, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_constraintsdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 41%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/moc_constraintsmodel.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforcefieldextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/forcefieldextension.dir/moc_constraintsmodel.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_constraintsmodel.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/constraintsmodel.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_constraintsmodel.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 41%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/moc_conformersearchdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dforcefieldextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/forcefieldextension.dir/moc_conformersearchdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_conformersearchdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/conformersearchdialog.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_conformersearchdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/forcefieldextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/forcefieldextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,forcefieldextension.so -o ../../../lib/forcefieldextension.so CMakeFiles/forcefieldextension.dir/forcefieldextension.cpp.o CMakeFiles/forcefieldextension.dir/forcefielddialog.cpp.o CMakeFiles/forcefieldextension.dir/constraintsdialog.cpp.o CMakeFiles/forcefieldextension.dir/constraintsmodel.cpp.o CMakeFiles/forcefieldextension.dir/conformersearchdialog.cpp.o CMakeFiles/forcefieldextension.dir/moc_forcefieldextension.cxx.o CMakeFiles/forcefieldextension.dir/moc_forcefielddialog.cxx.o CMakeFiles/forcefieldextension.dir/moc_constraintsdialog.cxx.o CMakeFiles/forcefieldextension.dir/moc_constraintsmodel.cxx.o CMakeFiles/forcefieldextension.dir/moc_conformersearchdialog.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 54 55 [ 41%] Built target forcefieldextension make -f libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/build.make libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 41%] Generating moc_gl2psextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_gl2psextension.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/DependInfo.cmake --color= Scanning dependencies of target gl2psextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/build.make libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 41%] Building CXX object libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/gl2psextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgl2psextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/gl2psextension.dir/gl2psextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/gl2psextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/gl2psextension.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 58 [ 42%] Building CXX object libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/moc_gl2psextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgl2psextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/gl2psextension.dir/moc_gl2psextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_gl2psextension.cxx Linking CXX shared module ../../../lib/gl2psextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/gl2psextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,gl2psextension.so -o ../../../lib/gl2psextension.so CMakeFiles/gl2psextension.dir/gl2psextension.cpp.o CMakeFiles/gl2psextension.dir/moc_gl2psextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -lgl2ps -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 58 [ 42%] Built target gl2psextension make -f libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/build.make libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 42%] Generating moc_h2methylextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_h2methylextension.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/DependInfo.cmake --color= Scanning dependencies of target h2methylextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/build.make libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 42%] Building CXX object libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/h2methylextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dh2methylextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/h2methylextension.dir/h2methylextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/h2methylextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/h2methylextension.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/h2methylextension.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 42%] Building CXX object libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/moc_h2methylextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dh2methylextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/h2methylextension.dir/moc_h2methylextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_h2methylextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/h2methylextension.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_h2methylextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/h2methylextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/h2methylextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,h2methylextension.so -o ../../../lib/h2methylextension.so CMakeFiles/h2methylextension.dir/h2methylextension.cpp.o CMakeFiles/h2methylextension.dir/moc_h2methylextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 42%] Built target h2methylextension make -f libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/build.make libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 42%] Generating moc_hydrogensextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_hydrogensextension.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/DependInfo.cmake --color= Scanning dependencies of target hydrogensextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/build.make libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 59 [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/hydrogensextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dhydrogensextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/hydrogensextension.dir/hydrogensextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/hydrogensextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/hydrogensextension.h:26, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/hydrogensextension.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/moc_hydrogensextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dhydrogensextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/hydrogensextension.dir/moc_hydrogensextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_hydrogensextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/hydrogensextension.h:26, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_hydrogensextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/hydrogensextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/hydrogensextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,hydrogensextension.so -o ../../../lib/hydrogensextension.so CMakeFiles/hydrogensextension.dir/hydrogensextension.cpp.o CMakeFiles/hydrogensextension.dir/moc_hydrogensextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 59 [ 43%] Built target hydrogensextension make -f libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/build.make libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 43%] Generating ui_insertfragmentdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_insertfragmentdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertfragmentdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 43%] Generating moc_insertfragmentextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_insertfragmentextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 43%] Generating moc_insertfragmentdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_insertfragmentdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 43%] Generating moc_sortfiltertreeproxymodel.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_sortfiltertreeproxymodel.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/DependInfo.cmake --color= Scanning dependencies of target insertfragmentextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/build.make libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 65 [ 44%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/insertfragmentextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinsertfragmentextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/insertfragmentextension.dir/insertfragmentextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertfragmentextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/atom.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertfragmentextension.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 44%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/insertfragmentdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinsertfragmentextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/insertfragmentextension.dir/insertfragmentdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertfragmentdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertfragmentdialog.cpp:31: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 44%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/insertcommand.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinsertfragmentextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/insertfragmentextension.dir/insertcommand.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertcommand.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertcommand.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 44%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/sortfiltertreeproxymodel.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinsertfragmentextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/insertfragmentextension.dir/sortfiltertreeproxymodel.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/sortfiltertreeproxymodel.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 44%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/moc_insertfragmentextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinsertfragmentextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/insertfragmentextension.dir/moc_insertfragmentextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_insertfragmentextension.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 44%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/moc_insertfragmentdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinsertfragmentextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/insertfragmentextension.dir/moc_insertfragmentdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_insertfragmentdialog.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 44%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/moc_sortfiltertreeproxymodel.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinsertfragmentextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/insertfragmentextension.dir/moc_sortfiltertreeproxymodel.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_sortfiltertreeproxymodel.cxx Linking CXX shared module ../../../lib/insertfragmentextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/insertfragmentextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,insertfragmentextension.so -o ../../../lib/insertfragmentextension.so CMakeFiles/insertfragmentextension.dir/insertfragmentextension.cpp.o CMakeFiles/insertfragmentextension.dir/insertfragmentdialog.cpp.o CMakeFiles/insertfragmentextension.dir/insertcommand.cpp.o CMakeFiles/insertfragmentextension.dir/sortfiltertreeproxymodel.cpp.o CMakeFiles/insertfragmentextension.dir/moc_insertfragmentextension.cxx.o CMakeFiles/insertfragmentextension.dir/moc_insertfragmentdialog.cxx.o CMakeFiles/insertfragmentextension.dir/moc_sortfiltertreeproxymodel.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 65 [ 44%] Built target insertfragmentextension make -f libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/build.make libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 66 [ 45%] Generating ui_insertpeptidedialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_insertpeptidedialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertpeptidedialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Generating moc_insertpeptideextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_insertpeptideextension.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/DependInfo.cmake --color= Scanning dependencies of target insertpeptideextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/build.make libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/insertpeptideextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinsertpeptideextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/insertpeptideextension.dir/insertpeptideextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertpeptideextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertpeptideextension.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/insertcommand.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinsertpeptideextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/insertpeptideextension.dir/insertcommand.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertcommand.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertcommand.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/moc_insertpeptideextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinsertpeptideextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/insertpeptideextension.dir/moc_insertpeptideextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_insertpeptideextension.cxx Linking CXX shared module ../../../lib/insertpeptideextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/insertpeptideextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,insertpeptideextension.so -o ../../../lib/insertpeptideextension.so CMakeFiles/insertpeptideextension.dir/insertpeptideextension.cpp.o CMakeFiles/insertpeptideextension.dir/insertcommand.cpp.o CMakeFiles/insertpeptideextension.dir/moc_insertpeptideextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 66 [ 45%] Built target insertpeptideextension make -f libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/build.make libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Generating moc_invertchiralextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_invertchiralextension.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/DependInfo.cmake --color= Scanning dependencies of target invertchiralextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/build.make libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/invertchiralextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinvertchiralextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/invertchiralextension.dir/invertchiralextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/invertchiralextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/invertchiralextension.h:25, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/invertchiralextension.cpp:20: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/moc_invertchiralextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinvertchiralextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/invertchiralextension.dir/moc_invertchiralextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_invertchiralextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/invertchiralextension.h:25, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_invertchiralextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/invertchiralextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/invertchiralextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,invertchiralextension.so -o ../../../lib/invertchiralextension.so CMakeFiles/invertchiralextension.dir/invertchiralextension.cpp.o CMakeFiles/invertchiralextension.dir/moc_invertchiralextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Built target invertchiralextension make -f libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/build.make libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Generating ui_molecularpropdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_molecularpropdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/molecularpropdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Generating moc_molecularpropextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_molecularpropextension.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/DependInfo.cmake --color= Scanning dependencies of target molecularpropextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/build.make libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/molecularpropextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dmolecularpropextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/molecularpropextension.dir/molecularpropextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/molecularpropextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/molecularpropextension.h:25, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/molecularpropextension.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/moc_molecularpropextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dmolecularpropextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/molecularpropextension.dir/moc_molecularpropextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_molecularpropextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/molecularpropextension.h:25, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_molecularpropextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/molecularpropextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/molecularpropextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,molecularpropextension.so -o ../../../lib/molecularpropextension.so CMakeFiles/molecularpropextension.dir/molecularpropextension.cpp.o CMakeFiles/molecularpropextension.dir/moc_molecularpropextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lQtNetwork -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Built target molecularpropextension make -f libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/build.make libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Generating moc_networkfetchextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_networkfetchextension.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/DependInfo.cmake --color= Scanning dependencies of target networkfetchextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/build.make libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/networkfetchextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dnetworkfetchextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/networkfetchextension.dir/networkfetchextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/networkfetchextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/networkfetchextension.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/moc_networkfetchextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dnetworkfetchextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/networkfetchextension.dir/moc_networkfetchextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_networkfetchextension.cxx Linking CXX shared module ../../../lib/networkfetchextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/networkfetchextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,networkfetchextension.so -o ../../../lib/networkfetchextension.so CMakeFiles/networkfetchextension.dir/networkfetchextension.cpp.o CMakeFiles/networkfetchextension.dir/moc_networkfetchextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lQtNetwork -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Built target networkfetchextension make -f libavogadro/src/extensions/CMakeFiles/povrayextension.dir/build.make libavogadro/src/extensions/CMakeFiles/povrayextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Generating ui_povraydialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_povraydialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povraydialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Generating moc_povrayextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_povrayextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Generating moc_povraydialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_povraydialog.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/povrayextension.dir/DependInfo.cmake --color= Scanning dependencies of target povrayextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/povrayextension.dir/build.make libavogadro/src/extensions/CMakeFiles/povrayextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/povrayextension.dir/povrayextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpovrayextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/povrayextension.dir/povrayextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povrayextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povraydialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povrayextension.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povrayextension.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/povrayextension.dir/povpainter.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpovrayextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/povrayextension.dir/povpainter.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povpainter.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/painter.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povpainter.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povpainter.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/povrayextension.dir/povraydialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpovrayextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/povrayextension.dir/povraydialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povraydialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povraydialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/povraydialog.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Building CXX object libavogadro/src/extensions/CMakeFiles/povrayextension.dir/moc_povrayextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpovrayextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/povrayextension.dir/moc_povrayextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_povrayextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/povraydialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/povrayextension.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_povrayextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 74 [ 46%] Building CXX object libavogadro/src/extensions/CMakeFiles/povrayextension.dir/moc_povraydialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpovrayextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/povrayextension.dir/moc_povraydialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_povraydialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/povraydialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_povraydialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/povrayextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/povrayextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,povrayextension.so -o ../../../lib/povrayextension.so CMakeFiles/povrayextension.dir/povrayextension.cpp.o CMakeFiles/povrayextension.dir/povpainter.cpp.o CMakeFiles/povrayextension.dir/povraydialog.cpp.o CMakeFiles/povrayextension.dir/moc_povrayextension.cxx.o CMakeFiles/povrayextension.dir/moc_povraydialog.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 74 [ 46%] Built target povrayextension make -f libavogadro/src/extensions/CMakeFiles/propextension.dir/build.make libavogadro/src/extensions/CMakeFiles/propextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 46%] Generating moc_propextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_propextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 46%] Generating __/tools/moc_skeletontree.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/__/tools && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/__/tools/moc_skeletontree.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 46%] Generating moc_propmodel.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_propmodel.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/propextension.dir/DependInfo.cmake --color= Scanning dependencies of target propextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/propextension.dir/build.make libavogadro/src/extensions/CMakeFiles/propextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 46%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/__/tools/skeletontree.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpropextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/propextension.dir/__/tools/skeletontree.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/tools/skeletontree.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/skeletontree.h:36, from /build/buildd/avogadro-1.1.0/libavogadro/src/tools/skeletontree.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 46%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/propmodel.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpropextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/propextension.dir/propmodel.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/propmodel.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/propmodel.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/propmodel.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 46%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/propextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpropextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/propextension.dir/propextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/propextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/propmodel.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/propextension.h:25, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/propextension.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 46%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/__/tools/moc_skeletontree.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpropextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/propextension.dir/__/tools/moc_skeletontree.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/__/tools/moc_skeletontree.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/__/tools/../../../../../../libavogadro/src/tools/skeletontree.h:36, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/__/tools/moc_skeletontree.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 75 [ 47%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/moc_propmodel.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpropextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/propextension.dir/moc_propmodel.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_propmodel.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/propmodel.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_propmodel.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 47%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/moc_propextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpropextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/propextension.dir/moc_propextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_propextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/propmodel.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/propextension.h:25, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_propextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/propextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/propextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,propextension.so -o ../../../lib/propextension.so CMakeFiles/propextension.dir/__/tools/skeletontree.cpp.o CMakeFiles/propextension.dir/propmodel.cpp.o CMakeFiles/propextension.dir/propextension.cpp.o CMakeFiles/propextension.dir/__/tools/moc_skeletontree.cxx.o CMakeFiles/propextension.dir/moc_propmodel.cxx.o CMakeFiles/propextension.dir/moc_propextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 75 [ 47%] Built target propextension make -f libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/build.make libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 47%] Generating ui_pythonterminalwidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_pythonterminalwidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/pythonterminalwidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 47%] Generating moc_pythonterminal.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_pythonterminal.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 47%] Generating moc_highlighter.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_highlighter.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/DependInfo.cmake --color= Scanning dependencies of target pythonterminal make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/build.make libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 80 [ 48%] Building CXX object libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/pythonterminal.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpythonterminal_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/pythonterminal.dir/pythonterminal.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/pythonterminal.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/pythonterminal.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/pythonterminal.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 48%] Building CXX object libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/highlighter.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpythonterminal_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/pythonterminal.dir/highlighter.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/highlighter.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 48%] Building CXX object libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/moc_pythonterminal.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpythonterminal_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/pythonterminal.dir/moc_pythonterminal.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_pythonterminal.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/../../../../libavogadro/src/extensions/pythonterminal.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_pythonterminal.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 48%] Building CXX object libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/moc_highlighter.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dpythonterminal_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/pythonterminal.dir/moc_highlighter.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_highlighter.cxx Linking CXX shared module ../../../lib/pythonterminal.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/pythonterminal.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,pythonterminal.so -o ../../../lib/pythonterminal.so CMakeFiles/pythonterminal.dir/pythonterminal.cpp.o CMakeFiles/pythonterminal.dir/highlighter.cpp.o CMakeFiles/pythonterminal.dir/moc_pythonterminal.cxx.o CMakeFiles/pythonterminal.dir/moc_highlighter.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lpython2.7 -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 80 [ 48%] Built target pythonterminal make -f libavogadro/src/extensions/CMakeFiles/selectextension.dir/build.make libavogadro/src/extensions/CMakeFiles/selectextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 48%] Generating moc_selectextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_selectextension.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/selectextension.dir/DependInfo.cmake --color= Scanning dependencies of target selectextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/selectextension.dir/build.make libavogadro/src/extensions/CMakeFiles/selectextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 48%] Building CXX object libavogadro/src/extensions/CMakeFiles/selectextension.dir/selectextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dselectextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/selectextension.dir/selectextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/selectextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/selectextension.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 48%] Building CXX object libavogadro/src/extensions/CMakeFiles/selectextension.dir/moc_selectextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dselectextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/selectextension.dir/moc_selectextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_selectextension.cxx Linking CXX shared module ../../../lib/selectextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/selectextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,selectextension.so -o ../../../lib/selectextension.so CMakeFiles/selectextension.dir/selectextension.cpp.o CMakeFiles/selectextension.dir/moc_selectextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 48%] Built target selectextension make -f libavogadro/src/extensions/CMakeFiles/shaderextension.dir/build.make libavogadro/src/extensions/CMakeFiles/shaderextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 48%] Generating ui_shaderdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_shaderdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/shaderdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 48%] Generating moc_shaderextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_shaderextension.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/shaderextension.dir/DependInfo.cmake --color= Scanning dependencies of target shaderextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/shaderextension.dir/build.make libavogadro/src/extensions/CMakeFiles/shaderextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 48%] Building CXX object libavogadro/src/extensions/CMakeFiles/shaderextension.dir/shaderextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dshaderextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/shaderextension.dir/shaderextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/shaderextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/shaderextension.cpp:31: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 85 [ 49%] Building CXX object libavogadro/src/extensions/CMakeFiles/shaderextension.dir/moc_shaderextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dshaderextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/shaderextension.dir/moc_shaderextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_shaderextension.cxx Linking CXX shared module ../../../lib/shaderextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/shaderextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,shaderextension.so -o ../../../lib/shaderextension.so CMakeFiles/shaderextension.dir/shaderextension.cpp.o CMakeFiles/shaderextension.dir/moc_shaderextension.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -lGLEW -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 85 [ 49%] Built target shaderextension make -f libavogadro/src/extensions/CMakeFiles/supercellextension.dir/build.make libavogadro/src/extensions/CMakeFiles/supercellextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 49%] Generating ui_supercelldialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/ui_supercelldialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/supercelldialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 49%] Generating moc_supercellextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_supercellextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 93 [ 50%] Generating moc_supercelldialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_supercelldialog.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/supercellextension.dir/DependInfo.cmake --color= Scanning dependencies of target supercellextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/supercellextension.dir/build.make libavogadro/src/extensions/CMakeFiles/supercellextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 50%] Building CXX object libavogadro/src/extensions/CMakeFiles/supercellextension.dir/supercellextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsupercellextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/supercellextension.dir/supercellextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/supercellextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/supercellextension.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 50%] Building CXX object libavogadro/src/extensions/CMakeFiles/supercellextension.dir/supercelldialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsupercellextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/supercellextension.dir/supercelldialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/supercelldialog.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 50%] Building CXX object libavogadro/src/extensions/CMakeFiles/supercellextension.dir/moc_supercellextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsupercellextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/supercellextension.dir/moc_supercellextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_supercellextension.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 50%] Building CXX object libavogadro/src/extensions/CMakeFiles/supercellextension.dir/moc_supercelldialog.cxx.o cd 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-I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -o CMakeFiles/supercellextension.dir/moc_supercelldialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/moc_supercelldialog.cxx Linking CXX shared module ../../../lib/supercellextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions && /usr/bin/cmake -E cmake_link_script CMakeFiles/supercellextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,supercellextension.so -o ../../../lib/supercellextension.so CMakeFiles/supercellextension.dir/supercellextension.cpp.o CMakeFiles/supercellextension.dir/supercelldialog.cpp.o CMakeFiles/supercellextension.dir/moc_supercellextension.cxx.o CMakeFiles/supercellextension.dir/moc_supercelldialog.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 93 [ 50%] Built target supercellextension make -f libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/build.make libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/DependInfo.cmake --color= Scanning dependencies of target spglib make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/build.make libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 50%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/cell.c.o cd 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CMakeFiles/spglib.dir/cell.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/cell.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 50%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/debug.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -w -o CMakeFiles/spglib.dir/debug.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/debug.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 50%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/hall_symbol.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -w -o CMakeFiles/spglib.dir/hall_symbol.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/hall_symbol.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 50%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/lattice.c.o cd 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CMakeFiles/spglib.dir/lattice.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/lattice.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 50%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/mathfunc.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -w -o CMakeFiles/spglib.dir/mathfunc.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/mathfunc.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 91 [ 51%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/pointgroup.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -w -o CMakeFiles/spglib.dir/pointgroup.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/pointgroup.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 51%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/primitive.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -w -o CMakeFiles/spglib.dir/primitive.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/primitive.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 51%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/refinement.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -w -o CMakeFiles/spglib.dir/refinement.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/refinement.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 51%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/spacegroup.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -w -o CMakeFiles/spglib.dir/spacegroup.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/spacegroup.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 51%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/spg_database.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -w -o CMakeFiles/spglib.dir/spg_database.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/spg_database.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 51%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/spglib.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -w -o CMakeFiles/spglib.dir/spglib.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/spglib.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 51%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/symmetry.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -w -o CMakeFiles/spglib.dir/symmetry.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/symmetry.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 51%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/symmetry_kpoint.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -w -o CMakeFiles/spglib.dir/symmetry_kpoint.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib/symmetry_kpoint.c Linking C static library libspglib.a cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cmake -P CMakeFiles/spglib.dir/cmake_clean_target.cmake cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib && /usr/bin/cmake -E cmake_link_script CMakeFiles/spglib.dir/link.txt --verbose=1 /usr/bin/ar cr libspglib.a CMakeFiles/spglib.dir/cell.c.o CMakeFiles/spglib.dir/debug.c.o CMakeFiles/spglib.dir/hall_symbol.c.o CMakeFiles/spglib.dir/lattice.c.o CMakeFiles/spglib.dir/mathfunc.c.o CMakeFiles/spglib.dir/pointgroup.c.o CMakeFiles/spglib.dir/primitive.c.o CMakeFiles/spglib.dir/refinement.c.o CMakeFiles/spglib.dir/spacegroup.c.o CMakeFiles/spglib.dir/spg_database.c.o CMakeFiles/spglib.dir/spglib.c.o CMakeFiles/spglib.dir/symmetry.c.o CMakeFiles/spglib.dir/symmetry_kpoint.c.o /usr/bin/ranlib libspglib.a make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 91 [ 51%] Built target spglib make -f libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/build.make libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 47 [ 52%] Generating ui_ceviewoptionswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui_ceviewoptionswidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceviewoptionswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 45 [ 53%] Generating moc_crystallographyextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/moc_crystallographyextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 53%] Generating moc_crystalpastedialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/moc_crystalpastedialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 53%] Generating ui/moc_ceabstractdockwidget.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_ceabstractdockwidget.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 53%] Generating ui/moc_ceabstracteditor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_ceabstracteditor.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 53%] Generating ui/moc_cecoordinateeditor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_cecoordinateeditor.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 53%] Generating ui/moc_cematrixeditor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_cematrixeditor.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 53%] Generating ui/moc_ceparametereditor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_ceparametereditor.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 53%] Generating ui/moc_ceslabbuilder.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_ceslabbuilder.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 46 [ 54%] Generating ui/moc_cetranslatewidget.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_cetranslatewidget.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Generating ui/moc_ceviewoptionswidget.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_ceviewoptionswidget.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Generating ui_crystalpastedialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui_crystalpastedialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/crystalpastedialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Generating ui_cecoordinateeditor.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui_cecoordinateeditor.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/cecoordinateeditor.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Generating ui_cematrixeditor.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui_cematrixeditor.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/cematrixeditor.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Generating ui_ceparametereditor.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui_ceparametereditor.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceparametereditor.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Generating ui_ceslabbuilder.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui_ceslabbuilder.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceslabbuilder.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Generating ui_cetranslatewidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui_cetranslatewidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/cetranslatewidget.ui cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/DependInfo.cmake --color= Scanning dependencies of target crystallographyextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/build.make libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/avospglib.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/avospglib.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/avospglib.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/avospglib.h:21, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/avospglib.cpp:18: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ceundo.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ceundo.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ceundo.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/crystallographyextension.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ceundo.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ceundo.cpp:19: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/crystallographyextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/crystallographyextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/crystallographyextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/crystallographyextension.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/crystallographyextension.cpp:30: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/crystallographyextension.cpp: In member function 'bool Avogadro::CrystallographyExtension::niggliReduce()': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/crystallographyextension.cpp:1614:12: warning: unused variable 'origVolume' [-Wunused-variable] double origVolume = currentVolume(); ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/crystalpastedialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/crystalpastedialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/crystalpastedialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/crystalpastedialog.h:21, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/crystalpastedialog.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/ceabstractdockwidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/ceabstractdockwidget.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/../crystallographyextension.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/ceabstracteditor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/ceabstracteditor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceabstracteditor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/../crystallographyextension.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceabstracteditor.cpp:24: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 54%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/cecoordinateeditor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/cecoordinateeditor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/cecoordinateeditor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/../crystallographyextension.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/../ceundo.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/cecoordinateeditor.cpp:20: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 48 [ 55%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/cematrixeditor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/cematrixeditor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/cematrixeditor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/cematrixeditor.h:23, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/cematrixeditor.cpp:18: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 55%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/ceparametereditor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/ceparametereditor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceparametereditor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/../crystallographyextension.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceparametereditor.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceparametereditor.cpp:18: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 55%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/ceslabbuilder.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/ceslabbuilder.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceslabbuilder.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/../crystallographyextension.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/../ceundo.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceslabbuilder.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 55%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/cetranslatewidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/cetranslatewidget.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/cetranslatewidget.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/cetranslatewidget.h:27, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/cetranslatewidget.cpp:18: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 55%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/ceviewoptionswidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/ceviewoptionswidget.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceviewoptionswidget.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/../crystallographyextension.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/../ceundo.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/ui/ceviewoptionswidget.cpp:21: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 55%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/moc_crystallographyextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/moc_crystallographyextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/moc_crystallographyextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/../../../../../libavogadro/src/extensions/crystallography/crystallographyextension.h:24, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/moc_crystallographyextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 55%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/moc_crystalpastedialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/moc_crystalpastedialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/moc_crystalpastedialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/../../../../../libavogadro/src/extensions/crystallography/crystalpastedialog.h:21, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/moc_crystalpastedialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 55%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_ceabstractdockwidget.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/moc_ceabstractdockwidget.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_ceabstractdockwidget.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 49 [ 56%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_ceabstracteditor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/moc_ceabstracteditor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_ceabstracteditor.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 56%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_cecoordinateeditor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/moc_cecoordinateeditor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_cecoordinateeditor.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 56%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_cematrixeditor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/moc_cematrixeditor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_cematrixeditor.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/cematrixeditor.h:23, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_cematrixeditor.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 56%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_ceparametereditor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/moc_ceparametereditor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_ceparametereditor.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/../crystallographyextension.h:24, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceparametereditor.h:22, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_ceparametereditor.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 56%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_ceslabbuilder.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/moc_ceslabbuilder.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_ceslabbuilder.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 56%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_cetranslatewidget.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/moc_cetranslatewidget.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_cetranslatewidget.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/cetranslatewidget.h:27, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_cetranslatewidget.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 56%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_ceviewoptionswidget.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcrystallographyextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography -o CMakeFiles/crystallographyextension.dir/ui/moc_ceviewoptionswidget.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/ui/moc_ceviewoptionswidget.cxx Linking CXX shared module ../../../../lib/crystallographyextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography && /usr/bin/cmake -E cmake_link_script CMakeFiles/crystallographyextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,crystallographyextension.so -o ../../../../lib/crystallographyextension.so CMakeFiles/crystallographyextension.dir/avospglib.cpp.o CMakeFiles/crystallographyextension.dir/ceundo.cpp.o CMakeFiles/crystallographyextension.dir/crystallographyextension.cpp.o CMakeFiles/crystallographyextension.dir/crystalpastedialog.cpp.o CMakeFiles/crystallographyextension.dir/ui/ceabstractdockwidget.cpp.o CMakeFiles/crystallographyextension.dir/ui/ceabstracteditor.cpp.o CMakeFiles/crystallographyextension.dir/ui/cecoordinateeditor.cpp.o CMakeFiles/crystallographyextension.dir/ui/cematrixeditor.cpp.o CMakeFiles/crystallographyextension.dir/ui/ceparametereditor.cpp.o CMakeFiles/crystallographyextension.dir/ui/ceslabbuilder.cpp.o CMakeFiles/crystallographyextension.dir/ui/cetranslatewidget.cpp.o CMakeFiles/crystallographyextension.dir/ui/ceviewoptionswidget.cpp.o CMakeFiles/crystallographyextension.dir/moc_crystallographyextension.cxx.o CMakeFiles/crystallographyextension.dir/moc_crystalpastedialog.cxx.o CMakeFiles/crystallographyextension.dir/ui/moc_ceabstractdockwidget.cxx.o CMakeFiles/crystallographyextension.dir/ui/moc_ceabstracteditor.cxx.o CMakeFiles/crystallographyextension.dir/ui/moc_cecoordinateeditor.cxx.o CMakeFiles/crystallographyextension.dir/ui/moc_cematrixeditor.cxx.o CMakeFiles/crystallographyextension.dir/ui/moc_ceparametereditor.cxx.o CMakeFiles/crystallographyextension.dir/ui/moc_ceslabbuilder.cxx.o CMakeFiles/crystallographyextension.dir/ui/moc_cetranslatewidget.cxx.o CMakeFiles/crystallographyextension.dir/ui/moc_ceviewoptionswidget.cxx.o ../../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext spglib/libspglib.a -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 45 46 47 48 49 [ 56%] Built target crystallographyextension make -f libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/build.make libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 56%] Generating ui_tab_cd.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/ui_tab_cd.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/tab_cd.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 56%] Generating moc_spectraextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_spectraextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 86 [ 57%] Generating moc_spectradialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_spectradialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 57%] Generating moc_spectratype.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_spectratype.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 57%] Generating moc_abstract_ir.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_abstract_ir.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 57%] Generating moc_ir.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_ir.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 57%] Generating moc_nmr.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_nmr.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 57%] Generating moc_dos.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_dos.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 57%] Generating moc_uv.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_uv.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 57%] Generating moc_cd.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_cd.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 87 [ 58%] Generating moc_raman.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_raman.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 58%] Generating ui_spectradialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/ui_spectradialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 58%] Generating ui_tab_ir_raman.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/ui_tab_ir_raman.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/tab_ir_raman.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 58%] Generating ui_tab_nmr.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/ui_tab_nmr.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/tab_nmr.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 58%] Generating ui_tab_dos.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/ui_tab_dos.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/tab_dos.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 58%] Generating ui_tab_uv.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/ui_tab_uv.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/tab_uv.ui cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/DependInfo.cmake --color= Scanning dependencies of target spectraextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/build.make libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 58%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/spectraextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/spectraextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectraextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectraextension.h:25, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectraextension.cpp:19: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 88 [ 59%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/spectradialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/spectradialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.cpp:20: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 59%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/spectratype.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/spectratype.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectratype.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectratype.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectratype.cpp:21: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 59%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/abstract_ir.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/abstract_ir.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/abstract_ir.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/abstract_ir.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/abstract_ir.cpp:21: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 59%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/ir.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/ir.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/ir.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/abstract_ir.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/ir.h:23, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/ir.cpp:21: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 59%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/nmr.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/nmr.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/nmr.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/nmr.h:25, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/nmr.cpp:20: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 59%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/dos.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/dos.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/dos.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/dos.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/dos.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 59%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/uv.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/uv.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/uv.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/uv.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/uv.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 59%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/cd.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/cd.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/cd.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/cd.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/cd.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 89 [ 60%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/raman.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/raman.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/raman.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/abstract_ir.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/raman.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/raman.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 60%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_spectraextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/moc_spectraextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_spectraextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectraextension.h:25, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_spectraextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 60%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_spectradialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/moc_spectradialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_spectradialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_spectradialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 60%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_spectratype.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/moc_spectratype.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_spectratype.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectratype.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_spectratype.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 60%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_abstract_ir.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/moc_abstract_ir.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_abstract_ir.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/abstract_ir.h:24, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_abstract_ir.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 60%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_ir.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/moc_ir.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_ir.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/abstract_ir.h:24, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/ir.h:23, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_ir.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 60%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_nmr.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/moc_nmr.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_nmr.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/nmr.h:25, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_nmr.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 60%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_dos.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/moc_dos.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_dos.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/dos.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_dos.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 90 [ 61%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_uv.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/moc_uv.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_uv.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/uv.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_uv.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 61%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_cd.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/moc_cd.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_cd.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/cd.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_cd.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 61%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_raman.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dspectraextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/spectraextension.dir/moc_raman.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_raman.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/abstract_ir.h:24, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/raman.h:24, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_raman.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../../lib/spectraextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/cmake -E cmake_link_script CMakeFiles/spectraextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,spectraextension.so -o ../../../../lib/spectraextension.so CMakeFiles/spectraextension.dir/spectraextension.cpp.o CMakeFiles/spectraextension.dir/spectradialog.cpp.o CMakeFiles/spectraextension.dir/spectratype.cpp.o CMakeFiles/spectraextension.dir/abstract_ir.cpp.o CMakeFiles/spectraextension.dir/ir.cpp.o CMakeFiles/spectraextension.dir/nmr.cpp.o CMakeFiles/spectraextension.dir/dos.cpp.o CMakeFiles/spectraextension.dir/uv.cpp.o CMakeFiles/spectraextension.dir/cd.cpp.o CMakeFiles/spectraextension.dir/raman.cpp.o CMakeFiles/spectraextension.dir/moc_spectraextension.cxx.o CMakeFiles/spectraextension.dir/moc_spectradialog.cxx.o CMakeFiles/spectraextension.dir/moc_spectratype.cxx.o CMakeFiles/spectraextension.dir/moc_abstract_ir.cxx.o CMakeFiles/spectraextension.dir/moc_ir.cxx.o CMakeFiles/spectraextension.dir/moc_nmr.cxx.o CMakeFiles/spectraextension.dir/moc_dos.cxx.o CMakeFiles/spectraextension.dir/moc_uv.cxx.o CMakeFiles/spectraextension.dir/moc_cd.cxx.o CMakeFiles/spectraextension.dir/moc_raman.cxx.o ../../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 86 87 88 89 90 [ 61%] Built target spectraextension make -f libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/build.make libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 99 [ 62%] Generating ui_vibrationwidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/ui_vibrationwidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/vibrationwidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Generating moc_vibrationextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_vibrationextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Generating moc_vibrationwidget.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_vibrationwidget.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/DependInfo.cmake --color= Scanning dependencies of target vibrationextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/build.make libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/vibrationextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dvibrationextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/vibrationextension.dir/vibrationextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/vibrationextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/vibrationwidget.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/vibrationextension.h:26, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/vibrationextension.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/vibrationwidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dvibrationextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/vibrationextension.dir/vibrationwidget.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/vibrationwidget.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/vibrationwidget.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra/vibrationwidget.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/moc_vibrationextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dvibrationextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/vibrationextension.dir/moc_vibrationextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_vibrationextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/vibrationwidget.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/vibrationextension.h:26, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_vibrationextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/moc_vibrationwidget.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dvibrationextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra -o CMakeFiles/vibrationextension.dir/moc_vibrationwidget.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_vibrationwidget.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/vibrationwidget.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/moc_vibrationwidget.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../../lib/vibrationextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra && /usr/bin/cmake -E cmake_link_script CMakeFiles/vibrationextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,vibrationextension.so -o ../../../../lib/vibrationextension.so CMakeFiles/vibrationextension.dir/vibrationextension.cpp.o CMakeFiles/vibrationextension.dir/vibrationwidget.cpp.o CMakeFiles/vibrationextension.dir/moc_vibrationextension.cxx.o CMakeFiles/vibrationextension.dir/moc_vibrationwidget.cxx.o ../../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 99 [ 62%] Built target vibrationextension make -f libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/build.make libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Generating moc_slaterset.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/moc_slaterset.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Generating moc_basisset.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/moc_basisset.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Generating moc_gaussianset.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/moc_gaussianset.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/DependInfo.cmake --color= Scanning dependencies of target OpenQube make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/build.make libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/atom.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/atom.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/atom.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:25, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/atom.h:20, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/atom.cpp:17: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/basisset.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/basisset.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/basisset.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/atom.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/basisset.cpp:17: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/basissetloader.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/basissetloader.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/basissetloader.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/atom.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gaussianset.h:21, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/basissetloader.cpp:19: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/cube.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/cube.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/cube.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/cube.h:23, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/cube.cpp:17: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 62%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/gamessukout.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/gamessukout.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/atom.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gaussianset.h:21, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.h:20, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp:17: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp: In member function 'void OpenQube::GamessukOut::readInitialCoordinates(std::ifstream&)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp:299:8: warning: variable 'ok' set but not used [-Wunused-but-set-variable] bool ok; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp: In member function 'void OpenQube::GamessukOut::readBasisSet(std::ifstream&)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp:335:8: warning: variable 'ok' set but not used [-Wunused-but-set-variable] bool ok, newAtom=true, gotAtom=false, firstAtom=true; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp: In member function 'void OpenQube::GamessukOut::readOptimisedCoordinates(std::ifstream&)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp:573:8: warning: variable 'ok' set but not used [-Wunused-but-set-variable] bool ok; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp: In member function 'int OpenQube::GamessukOut::readMOVectors(std::ifstream&)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp:671:8: warning: variable 'ok' set but not used [-Wunused-but-set-variable] bool ok; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 1 [ 63%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/gamessus.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/gamessus.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessus.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessus.h:21, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessus.cpp:17: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessus.cpp: In member function 'void OpenQube::GAMESSUSOutput::processLine(OpenQube::GaussianSet*)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gamessus.cpp:195:9: warning: 'numColumns' may be used uninitialized in this function [-Wmaybe-uninitialized] for (unsigned int i = 0; i < numColumns; ++i) { ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 63%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/gaussianfchk.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/gaussianfchk.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gaussianfchk.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gaussianfchk.h:21, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gaussianfchk.cpp:17: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 63%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/gaussianset.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/gaussianset.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gaussianset.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/atom.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gaussianset.h:21, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/gaussianset.cpp:18: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 63%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/molden.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/molden.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molden.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molden.h:20, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molden.cpp:17: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molden.cpp: In member function 'void OpenQube::MoldenFile::processLine()': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molden.cpp:133:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (unsigned int gto = 0; gto < numGTOs; ++gto) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molden.cpp:90:12: warning: enumeration value 'NotParsing' not handled in switch [-Wswitch] switch (m_currentMode) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molden.cpp:90:12: warning: enumeration value 'STO' not handled in switch [-Wswitch] /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molden.cpp:90:12: warning: enumeration value 'SCF' not handled in switch [-Wswitch] /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 63%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/molecule.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/molecule.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molecule.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/atom.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molecule.cpp:17: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 63%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/mopacaux.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/mopacaux.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/mopacaux.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/mopacaux.h:21, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/mopacaux.cpp:17: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/mopacaux.cpp: In member function 'void OpenQube::MopacAux::load(OpenQube::SlaterSet*)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/mopacaux.cpp:139:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i = 0; i < m_atomPos.size(); ++i) { ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 63%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/slaterset.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/slaterset.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/slaterset.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/atom.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:22, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/slaterset.h:20, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube/slaterset.cpp:17: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 63%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_basisset.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/moc_basisset.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/moc_basisset.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/atom.h:22, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/molecule.h:22, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/moc_basisset.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 2 [ 64%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_gaussianset.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/moc_gaussianset.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/moc_gaussianset.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/atom.h:22, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/molecule.h:22, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/gaussianset.h:21, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/moc_gaussianset.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 64%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_slaterset.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DOpenQube_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -o CMakeFiles/OpenQube.dir/moc_slaterset.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/moc_slaterset.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/atom.h:22, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/molecule.h:22, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/slaterset.h:20, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/moc_slaterset.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared library ../../../../../lib/libavogadro_OpenQube.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenQube.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,libavogadro_OpenQube.so.0 -o ../../../../../lib/libavogadro_OpenQube.so.0.1.0 CMakeFiles/OpenQube.dir/atom.cpp.o CMakeFiles/OpenQube.dir/basisset.cpp.o CMakeFiles/OpenQube.dir/basissetloader.cpp.o CMakeFiles/OpenQube.dir/cube.cpp.o CMakeFiles/OpenQube.dir/gamessukout.cpp.o CMakeFiles/OpenQube.dir/gamessus.cpp.o CMakeFiles/OpenQube.dir/gaussianfchk.cpp.o CMakeFiles/OpenQube.dir/gaussianset.cpp.o CMakeFiles/OpenQube.dir/molden.cpp.o CMakeFiles/OpenQube.dir/molecule.cpp.o CMakeFiles/OpenQube.dir/mopacaux.cpp.o CMakeFiles/OpenQube.dir/slaterset.cpp.o CMakeFiles/OpenQube.dir/moc_basisset.cxx.o CMakeFiles/OpenQube.dir/moc_gaussianset.cxx.o CMakeFiles/OpenQube.dir/moc_slaterset.cxx.o -lQtCore cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libavogadro_OpenQube.so.0.1.0 ../../../../../lib/libavogadro_OpenQube.so.0 ../../../../../lib/libavogadro_OpenQube.so make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 1 2 [ 64%] Built target OpenQube make -f libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/build.make libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 64%] Generating ui_orbitalsettingsdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/ui_orbitalsettingsdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalsettingsdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 64%] Generating moc_orbitalextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_orbitalextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 70 [ 65%] Generating moc_orbitalsettingsdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_orbitalsettingsdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 65%] Generating moc_orbitaltablemodel.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_orbitaltablemodel.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 65%] Generating moc_orbitalwidget.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_orbitalwidget.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 65%] Generating moc_vdwsurface.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_vdwsurface.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 65%] Generating qtiocompressor/moc_qtiocompressor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/qtiocompressor && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/qtiocompressor/moc_qtiocompressor.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 65%] Generating moc_htmldelegate.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_htmldelegate.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 65%] Generating ui_orbitalwidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/ui_orbitalwidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalwidget.ui cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/DependInfo.cmake --color= Scanning dependencies of target orbitalextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/build.make libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 71 [ 66%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/orbitalextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/orbitalextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalwidget.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp:28: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp: In member function 'virtual void Avogadro::OrbitalExtension::setMolecule(Avogadro::Molecule*)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp:157:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i = 0; i < m_basis->numMOs(); i++) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp:159:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (i+1 != homo && i+1 != lumo) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp:159:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (i+1 != homo && i+1 != lumo) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp:189:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (i+1 < homo) count--; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp:190:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] else if (i+1 == homo) leqHOMO = false; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp:191:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] else if (i+1 >= lumo) count++; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp: In member function 'void Avogadro::OrbitalExtension::precalculateOrbitals()': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp:424:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (endIndex > m_basis->numMOs() - 1) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp:428:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (unsigned int i = startIndex; i <= endIndex; i++) { ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 66%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/orbitalsettingsdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/orbitalsettingsdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalsettingsdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalwidget.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalsettingsdialog.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalsettingsdialog.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 66%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/orbitaltablemodel.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/orbitaltablemodel.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitaltablemodel.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalwidget.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitaltablemodel.cpp:21: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 66%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/orbitalwidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/orbitalwidget.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalwidget.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalwidget.h:24, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/orbitalwidget.cpp:19: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 66%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/vdwsurface.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/vdwsurface.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/vdwsurface.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/vdwsurface.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/vdwsurface.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 66%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/qtiocompressor/qtiocompressor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/qtiocompressor/qtiocompressor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/qtiocompressor/qtiocompressor.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 66%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/htmldelegate.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/htmldelegate.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/htmldelegate.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 66%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_orbitalextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/moc_orbitalextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_orbitalextension.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 72 [ 67%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_orbitalsettingsdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/moc_orbitalsettingsdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_orbitalsettingsdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/orbitalwidget.h:24, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/orbitalsettingsdialog.h:31, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_orbitalsettingsdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 67%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_orbitaltablemodel.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/moc_orbitaltablemodel.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_orbitaltablemodel.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 67%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_orbitalwidget.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/moc_orbitalwidget.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_orbitalwidget.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/orbitalwidget.h:24, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_orbitalwidget.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 67%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_vdwsurface.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/moc_vdwsurface.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_vdwsurface.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/vdwsurface.h:33, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_vdwsurface.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 67%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/qtiocompressor/moc_qtiocompressor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/qtiocompressor/moc_qtiocompressor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/qtiocompressor/moc_qtiocompressor.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 67%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_htmldelegate.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dorbitalextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/orbitalextension.dir/moc_htmldelegate.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_htmldelegate.cxx Linking CXX shared module ../../../../lib/orbitalextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/cmake -E cmake_link_script CMakeFiles/orbitalextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,orbitalextension.so -o ../../../../lib/orbitalextension.so CMakeFiles/orbitalextension.dir/orbitalextension.cpp.o CMakeFiles/orbitalextension.dir/orbitalsettingsdialog.cpp.o CMakeFiles/orbitalextension.dir/orbitaltablemodel.cpp.o CMakeFiles/orbitalextension.dir/orbitalwidget.cpp.o CMakeFiles/orbitalextension.dir/vdwsurface.cpp.o CMakeFiles/orbitalextension.dir/qtiocompressor/qtiocompressor.cpp.o CMakeFiles/orbitalextension.dir/htmldelegate.cpp.o CMakeFiles/orbitalextension.dir/moc_orbitalextension.cxx.o CMakeFiles/orbitalextension.dir/moc_orbitalsettingsdialog.cxx.o CMakeFiles/orbitalextension.dir/moc_orbitaltablemodel.cxx.o CMakeFiles/orbitalextension.dir/moc_orbitalwidget.cxx.o CMakeFiles/orbitalextension.dir/moc_vdwsurface.cxx.o CMakeFiles/orbitalextension.dir/qtiocompressor/moc_qtiocompressor.cxx.o CMakeFiles/orbitalextension.dir/moc_htmldelegate.cxx.o ../../../../lib/libavogadro_OpenQube.so.0.1.0 ../../../../lib/libavogadro.so.1.1.0 -lz -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 70 71 72 [ 67%] Built target orbitalextension make -f libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/build.make libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 67%] Generating ui_surfacedialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/ui_surfacedialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/surfacedialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 67%] Generating moc_surfaceextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_surfaceextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 67%] Generating moc_surfacedialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_surfacedialog.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/DependInfo.cmake --color= Scanning dependencies of target surfaceextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/build.make libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 67%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/surfaceextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsurfaceextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/surfaceextension.dir/surfaceextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/surfaceextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/cube.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/surfacedialog.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/surfaceextension.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/surfaceextension.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 95 [ 68%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/surfacedialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsurfaceextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/surfaceextension.dir/surfacedialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/surfacedialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/cube.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/surfacedialog.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/surfacedialog.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 68%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/vdwsurface.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsurfaceextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/surfaceextension.dir/vdwsurface.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/vdwsurface.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/vdwsurface.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/vdwsurface.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 68%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/qtiocompressor/qtiocompressor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsurfaceextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/surfaceextension.dir/qtiocompressor/qtiocompressor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/qtiocompressor/qtiocompressor.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 68%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/moc_surfaceextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsurfaceextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/surfaceextension.dir/moc_surfaceextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_surfaceextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/cube.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/surfacedialog.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/surfaceextension.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_surfaceextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 68%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/moc_surfacedialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsurfaceextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/surfaceextension.dir/moc_surfacedialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_surfacedialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/cube.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/surfacedialog.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_surfacedialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 68%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/moc_vdwsurface.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsurfaceextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/surfaceextension.dir/moc_vdwsurface.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_vdwsurface.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/vdwsurface.h:33, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/moc_vdwsurface.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 68%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/qtiocompressor/moc_qtiocompressor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsurfaceextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces -o CMakeFiles/surfaceextension.dir/qtiocompressor/moc_qtiocompressor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/qtiocompressor/moc_qtiocompressor.cxx Linking CXX shared module ../../../../lib/surfaceextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces && /usr/bin/cmake -E cmake_link_script CMakeFiles/surfaceextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,surfaceextension.so -o ../../../../lib/surfaceextension.so CMakeFiles/surfaceextension.dir/surfaceextension.cpp.o CMakeFiles/surfaceextension.dir/surfacedialog.cpp.o CMakeFiles/surfaceextension.dir/vdwsurface.cpp.o CMakeFiles/surfaceextension.dir/qtiocompressor/qtiocompressor.cpp.o CMakeFiles/surfaceextension.dir/moc_surfaceextension.cxx.o CMakeFiles/surfaceextension.dir/moc_surfacedialog.cxx.o CMakeFiles/surfaceextension.dir/moc_vdwsurface.cxx.o CMakeFiles/surfaceextension.dir/qtiocompressor/moc_qtiocompressor.cxx.o ../../../../lib/libavogadro_OpenQube.so.0.1.0 ../../../../lib/libavogadro.so.1.1.0 -lz -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 95 [ 68%] Built target surfaceextension make -f libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/build.make libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/DependInfo.cmake --color= Scanning dependencies of target tubegen make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/build.make libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 68%] Building C object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Bitmap.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -w -o CMakeFiles/tubegen.dir/Bitmap.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen/Bitmap.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 68%] Building C object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Core3DMath.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -w -o CMakeFiles/tubegen.dir/Core3DMath.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen/Core3DMath.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 68%] Building C object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/eprintf.c.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/cc -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -O2 -g -DNDEBUG -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -w -o CMakeFiles/tubegen.dir/eprintf.c.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen/eprintf.c /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 68%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/ANSR.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -w -o CMakeFiles/tubegen.dir/ANSR.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen/ANSR.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 68%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Cell.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -w -o CMakeFiles/tubegen.dir/Cell.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen/Cell.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 98 [ 69%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/CrystalCell.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -w -o CMakeFiles/tubegen.dir/CrystalCell.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen/CrystalCell.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 69%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/diamond.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -w -o CMakeFiles/tubegen.dir/diamond.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen/diamond.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 69%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/fcc.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -w -o CMakeFiles/tubegen.dir/fcc.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen/fcc.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 69%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/graphite.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -w -o CMakeFiles/tubegen.dir/graphite.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen/graphite.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 69%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/TubeGen.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -w -o CMakeFiles/tubegen.dir/TubeGen.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen/TubeGen.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 69%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/TubuleBasis.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -w -o CMakeFiles/tubegen.dir/TubuleBasis.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen/TubuleBasis.cpp Linking CXX static library libtubegen.a cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/cmake -P CMakeFiles/tubegen.dir/cmake_clean_target.cmake cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen && /usr/bin/cmake -E cmake_link_script CMakeFiles/tubegen.dir/link.txt --verbose=1 /usr/bin/ar cr libtubegen.a CMakeFiles/tubegen.dir/Bitmap.c.o CMakeFiles/tubegen.dir/Core3DMath.c.o CMakeFiles/tubegen.dir/eprintf.c.o CMakeFiles/tubegen.dir/ANSR.cpp.o CMakeFiles/tubegen.dir/Cell.cpp.o CMakeFiles/tubegen.dir/CrystalCell.cpp.o CMakeFiles/tubegen.dir/diamond.cpp.o CMakeFiles/tubegen.dir/fcc.cpp.o CMakeFiles/tubegen.dir/graphite.cpp.o CMakeFiles/tubegen.dir/TubeGen.cpp.o CMakeFiles/tubegen.dir/TubuleBasis.cpp.o /usr/bin/ranlib libtubegen.a make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 98 [ 69%] Built target tubegen make -f libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/build.make libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 69%] Generating ui_swcntbuilderwidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/ui_swcntbuilderwidget.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/swcntbuilderwidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 69%] Generating moc_swcntbuilderextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/moc_swcntbuilderextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 96 [ 70%] Generating moc_swcntbuilderwidget.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/moc_swcntbuilderwidget.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 70%] Generating moc_avotubegen.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/moc_avotubegen.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/DependInfo.cmake --color= Scanning dependencies of target swcntbuilderextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/build.make libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 70%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/__/insertcommand.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dswcntbuilderextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -o CMakeFiles/swcntbuilderextension.dir/__/insertcommand.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertcommand.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/insertcommand.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 70%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/swcntbuilderextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dswcntbuilderextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -o CMakeFiles/swcntbuilderextension.dir/swcntbuilderextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/swcntbuilderextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/atom.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/swcntbuilderextension.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 70%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/swcntbuilderwidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dswcntbuilderextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -o CMakeFiles/swcntbuilderextension.dir/swcntbuilderwidget.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/swcntbuilderwidget.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/swcntbuilderwidget.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 70%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/avotubegen.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dswcntbuilderextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -o CMakeFiles/swcntbuilderextension.dir/avotubegen.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/avotubegen.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/atom.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/avotubegen.cpp:20: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 70%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/moc_swcntbuilderextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dswcntbuilderextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -o CMakeFiles/swcntbuilderextension.dir/moc_swcntbuilderextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/moc_swcntbuilderextension.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 97 [ 71%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/moc_swcntbuilderwidget.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dswcntbuilderextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -o CMakeFiles/swcntbuilderextension.dir/moc_swcntbuilderwidget.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/moc_swcntbuilderwidget.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 71%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/moc_avotubegen.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dswcntbuilderextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder -I/build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder -o CMakeFiles/swcntbuilderextension.dir/moc_avotubegen.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/moc_avotubegen.cxx Linking CXX shared module ../../../../lib/swcntbuilderextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder && /usr/bin/cmake -E cmake_link_script CMakeFiles/swcntbuilderextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,swcntbuilderextension.so -o ../../../../lib/swcntbuilderextension.so CMakeFiles/swcntbuilderextension.dir/__/insertcommand.cpp.o CMakeFiles/swcntbuilderextension.dir/swcntbuilderextension.cpp.o CMakeFiles/swcntbuilderextension.dir/swcntbuilderwidget.cpp.o CMakeFiles/swcntbuilderextension.dir/avotubegen.cpp.o CMakeFiles/swcntbuilderextension.dir/moc_swcntbuilderextension.cxx.o CMakeFiles/swcntbuilderextension.dir/moc_swcntbuilderwidget.cxx.o CMakeFiles/swcntbuilderextension.dir/moc_avotubegen.cxx.o ../../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext tubegen/libtubegen.a -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 96 97 [ 71%] Built target swcntbuilderextension make -f libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/build.make libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 81 [ 72%] Generating moc_qtaimextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim/moc_qtaimextension.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/DependInfo.cmake --color= Scanning dependencies of target qtaimextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/build.make libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 72%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dqtaimextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim -o CMakeFiles/qtaimextension.dir/qtaimextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimextension.h:26, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimextension.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 72%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimwavefunction.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dqtaimextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim -o CMakeFiles/qtaimextension.dir/qtaimwavefunction.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimwavefunction.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimwavefunction.h:40, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimwavefunction.cpp:31: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 72%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimwavefunctionevaluator.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dqtaimextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim -o CMakeFiles/qtaimextension.dir/qtaimwavefunctionevaluator.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimwavefunctionevaluator.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimwavefunction.h:40, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimwavefunctionevaluator.h:11, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimwavefunctionevaluator.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 72%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimodeintegrator.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dqtaimextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim -o CMakeFiles/qtaimextension.dir/qtaimodeintegrator.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:29: /usr/include/eigen2/Eigen/src/Core/Coeffs.h: In member function 'void Avogadro::QTAIMODEIntegrator::r8_f(qreal, qreal*, qreal*)': /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +64)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:213:23: note: '*((void*)& H +64)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:29: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +56)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:213:23: note: '*((void*)& H +56)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:29: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +48)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:213:23: note: '*((void*)& H +48)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:29: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +40)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:213:23: note: '*((void*)& H +40)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:29: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +32)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:213:23: note: '*((void*)& H +32)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:29: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +24)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:213:23: note: '*((void*)& H +24)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:29: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +16)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:213:23: note: '*((void*)& H +16)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:29: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +8)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:213:23: note: '*((void*)& H +8)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:29: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: 'H' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:213:23: note: 'H' was declared here Matrix H; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 72%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimcriticalpointlocator.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dqtaimextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim -o CMakeFiles/qtaimextension.dir/qtaimcriticalpointlocator.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcriticalpointlocator.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimwavefunction.h:40, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcriticalpointlocator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcriticalpointlocator.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcriticalpointlocator.cpp: In member function 'void Avogadro::QTAIMCriticalPointLocator::locateNuclearCriticalPoints()': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcriticalpointlocator.cpp:536:12: warning: unused variable 'correctSignature' [-Wunused-variable] bool correctSignature = results.at(n).at(0).toBool(); ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 72%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimmathutilities.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dqtaimextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim -o CMakeFiles/qtaimextension.dir/qtaimmathutilities.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/QR:4, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 72%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimlsodaintegrator.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dqtaimextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim -o CMakeFiles/qtaimextension.dir/qtaimlsodaintegrator.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:48: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp: In member function 'void Avogadro::QTAIMLSODAIntegrator::dgesl(double**, int, int*, double*, int)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:562:9: warning: variable 'nm1' set but not used [-Wunused-but-set-variable] int nm1, k, j; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp: In member function 'void Avogadro::QTAIMLSODAIntegrator::corfailure(double*, double*, int*, int*)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:2485:11: warning: value computed is not used [-Wunused-value] *ncf++; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:48: /usr/include/eigen2/Eigen/src/Core/Coeffs.h: In member function 'void Avogadro::QTAIMLSODAIntegrator::f(int, double, double*, double*)': /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +64)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:189:23: note: '*((void*)& H +64)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:48: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +56)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:189:23: note: '*((void*)& H +56)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:48: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +48)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:189:23: note: '*((void*)& H +48)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:48: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +40)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:189:23: note: '*((void*)& H +40)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:48: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +32)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:189:23: note: '*((void*)& H +32)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:48: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +24)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:189:23: note: '*((void*)& H +24)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:48: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +16)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:189:23: note: '*((void*)& H +16)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:48: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: '*((void*)& H +8)' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:189:23: note: '*((void*)& H +8)' was declared here Matrix H; ^ In file included from /usr/include/eigen2/Eigen/Core:121:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:48: /usr/include/eigen2/Eigen/src/Core/Coeffs.h:331:3: warning: 'H' may be used uninitialized in this function [-Wmaybe-uninitialized] derived().coeffRef(row, col) = other.derived().coeff(row, col); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:189:23: note: 'H' was declared here Matrix H; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp: In member function 'void Avogadro::QTAIMLSODAIntegrator::stoda(int, double*)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:1891:59: warning: 'dsm' may be used uninitialized in this function [-Wmaybe-uninitialized] orderswitch( &rhup, dsm, &pdh, &rh, &orderflag ); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp: In member function 'void Avogadro::QTAIMLSODAIntegrator::lsoda(int, double*, double*, double, int, double*, double*, int, int*, int, int, int, int, int, int, int, int, int, double, double, double, double)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:1342:58: warning: 'ihit' may be used uninitialized in this function [-Wmaybe-uninitialized] successreturn( y, t, itask, ihit, tcrit, istate ); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:1342:58: warning: 'tcrit' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:1196:46: warning: 'h0' may be used uninitialized in this function [-Wmaybe-uninitialized] if ( h0 != 0. && ( *t + h0 - tcrit ) * h0 > 0. ) ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 82 [ 73%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimcubature.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dqtaimextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim -o CMakeFiles/qtaimextension.dir/qtaimcubature.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimwavefunction.h:40, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.h:107, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:138: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp: In function 'void property_v(unsigned int, unsigned int, const double*, void*, unsigned int, double*)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:1317:10: warning: unused variable 'nbasin' [-Wunused-variable] qint64 nbasin=basinList.length(); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp: At global scope: /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:1289:6: warning: unused parameter 'ndim' [-Wunused-parameter] void property_v(unsigned int ndim, unsigned int npts, const double *xyz, void *param, ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:1289:6: warning: unused parameter 'fdim' [-Wunused-parameter] /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp: In function 'void property_v_rtp(unsigned int, unsigned int, const double*, void*, unsigned int, double*)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:1614:10: warning: unused variable 'nbasin' [-Wunused-variable] qint64 nbasin=basinList.length(); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp: At global scope: /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:1586:6: warning: unused parameter 'ndim' [-Wunused-parameter] void property_v_rtp(unsigned int ndim, unsigned int npts, const double *xyz, void *param, ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:1586:6: warning: unused parameter 'fdim' [-Wunused-parameter] /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp: In function 'void property_r(unsigned int, const double*, void*, unsigned int, double*)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:1733:10: warning: unused variable 'nbasin' [-Wunused-variable] qint64 nbasin=basinList.length(); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp: In function 'QList QTAIMEvaluatePropertyTP(QList)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:2091:9: warning: unused variable 'Rerr' [-Wunused-variable] qreal Rerr=err[0]; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp: In function 'void property_v_tp(unsigned int, unsigned int, const double*, void*, unsigned int, double*)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:2137:10: warning: unused variable 'nbasin' [-Wunused-variable] qint64 nbasin=basinList.length(); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp: At global scope: /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:2109:6: warning: unused parameter 'ndim' [-Wunused-parameter] void property_v_tp(unsigned int ndim, unsigned int npts, const double *xyz, void *param, ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:2109:6: warning: unused parameter 'fdim' [-Wunused-parameter] /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp: In function 'QList QTAIMEvaluatePropertyTP(QList)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:2068:15: warning: 'rf' may be used uninitialized in this function [-Wmaybe-uninitialized] xmax[0] = rf; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 73%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/moc_qtaimextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dqtaimextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim -o CMakeFiles/qtaimextension.dir/moc_qtaimextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim/moc_qtaimextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim/../../../../../libavogadro/src/extensions/qtaim/qtaimextension.h:26, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim/moc_qtaimextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../../lib/qtaimextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim && /usr/bin/cmake -E cmake_link_script CMakeFiles/qtaimextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,qtaimextension.so -o ../../../../lib/qtaimextension.so CMakeFiles/qtaimextension.dir/qtaimextension.cpp.o CMakeFiles/qtaimextension.dir/qtaimwavefunction.cpp.o CMakeFiles/qtaimextension.dir/qtaimwavefunctionevaluator.cpp.o CMakeFiles/qtaimextension.dir/qtaimodeintegrator.cpp.o CMakeFiles/qtaimextension.dir/qtaimcriticalpointlocator.cpp.o CMakeFiles/qtaimextension.dir/qtaimmathutilities.cpp.o CMakeFiles/qtaimextension.dir/qtaimlsodaintegrator.cpp.o CMakeFiles/qtaimextension.dir/qtaimcubature.cpp.o CMakeFiles/qtaimextension.dir/moc_qtaimextension.cxx.o ../../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 81 82 [ 73%] Built target qtaimextension make -f libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/build.make libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 73%] Generating ui_gamessefpmatchdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/ui_gamessefpmatchdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessefpmatchdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 73%] Generating moc_inputdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_inputdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 73%] Generating moc_gamessextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 73%] Generating moc_gamessinputdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessinputdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 73%] Generating moc_gamesshighlighter.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamesshighlighter.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 56 [ 74%] Generating moc_gamessefpmatchdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessefpmatchdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 74%] Generating ui_gamessinputdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/ui_gamessinputdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdialog.ui cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/DependInfo.cmake --color= Scanning dependencies of target gamessextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/build.make libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 74%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/inputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgamessextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/gamessextension.dir/inputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 74%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/gamessextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgamessextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/gamessextension.dir/gamessextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdata.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdialog.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessextension.h:26, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessextension.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 74%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/gamessinputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgamessextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/gamessextension.dir/gamessinputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdata.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdialog.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdialog.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 74%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/gamessinputdata.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgamessextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/gamessextension.dir/gamessinputdata.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdata.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdata.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdata.cpp:14: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdata.cpp: In member function 'long int Avogadro::GamessInputData::WriteInputFile(std::ostream&)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessinputdata.cpp:233:8: warning: variable 'BasisTest' set but not used [-Wunused-but-set-variable] long BasisTest=0; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 74%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/gamesshighlighter.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgamessextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/gamessextension.dir/gamesshighlighter.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamesshighlighter.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 57 [ 75%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/gamessefpmatchdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgamessextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/gamessextension.dir/gamessefpmatchdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessefpmatchdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessefpmatchdialog.h:27, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessefpmatchdialog.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 75%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/moc_inputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgamessextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/gamessextension.dir/moc_inputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_inputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_inputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 75%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/moc_gamessextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgamessextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/gamessextension.dir/moc_gamessextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessinputdata.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessinputdialog.h:30, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessextension.h:26, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 75%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/moc_gamessinputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgamessextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/gamessextension.dir/moc_gamessinputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessinputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessinputdata.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessinputdialog.h:30, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessinputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 75%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/moc_gamesshighlighter.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgamessextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/gamessextension.dir/moc_gamesshighlighter.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamesshighlighter.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 75%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/moc_gamessefpmatchdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dgamessextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/gamessextension.dir/moc_gamessefpmatchdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessefpmatchdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessefpmatchdialog.h:27, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessefpmatchdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../../lib/gamessextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,gamessextension.so -o ../../../../lib/gamessextension.so CMakeFiles/gamessextension.dir/inputdialog.cpp.o CMakeFiles/gamessextension.dir/gamessextension.cpp.o CMakeFiles/gamessextension.dir/gamessinputdialog.cpp.o CMakeFiles/gamessextension.dir/gamessinputdata.cpp.o CMakeFiles/gamessextension.dir/gamesshighlighter.cpp.o CMakeFiles/gamessextension.dir/gamessefpmatchdialog.cpp.o CMakeFiles/gamessextension.dir/moc_inputdialog.cxx.o CMakeFiles/gamessextension.dir/moc_gamessextension.cxx.o CMakeFiles/gamessextension.dir/moc_gamessinputdialog.cxx.o CMakeFiles/gamessextension.dir/moc_gamesshighlighter.cxx.o CMakeFiles/gamessextension.dir/moc_gamessefpmatchdialog.cxx.o ../../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 56 57 [ 75%] Built target gamessextension make -f libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/build.make libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 75%] Generating ui_teracheminputdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/ui_teracheminputdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/teracheminputdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 75%] Generating moc_inputfileextension.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_inputfileextension.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 75%] Generating moc_abinitinputdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_abinitinputdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 75%] Generating moc_daltoninputdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_daltoninputdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 75%] Generating moc_gamessukinputdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessukinputdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 75%] Generating moc_gaussianinputdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gaussianinputdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 60 [ 76%] Generating moc_molproinputdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_molproinputdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 76%] Generating moc_mopacinputdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_mopacinputdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 76%] Generating moc_nwcheminputdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_nwcheminputdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 76%] Generating moc_qcheminputdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_qcheminputdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 76%] Generating moc_teracheminputdialog.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_teracheminputdialog.cxx_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 76%] Generating ui_abinitinputdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/ui_abinitinputdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/abinitinputdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 76%] Generating ui_gaussianinputdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/ui_gaussianinputdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gaussianinputdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 76%] Generating ui_daltoninputdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/ui_daltoninputdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/daltoninputdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 61 [ 77%] Generating ui_gamessukinputdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/ui_gamessukinputdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessukinputdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 77%] Generating ui_molproinputdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/ui_molproinputdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/molproinputdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 77%] Generating ui_mopacinputdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/ui_mopacinputdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/mopacinputdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 77%] Generating ui_nwcheminputdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/ui_nwcheminputdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/nwcheminputdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 77%] Generating ui_qcheminputdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/ui_qcheminputdialog.h /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/qcheminputdialog.ui cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/DependInfo.cmake --color= Scanning dependencies of target inputfileextension make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/build.make libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 77%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/inputfileextension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/inputfileextension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputfileextension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputfileextension.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputfileextension.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 77%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/inputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/inputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 62 [ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/abinitinputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/abinitinputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/abinitinputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/abinitinputdialog.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/abinitinputdialog.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/daltoninputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/daltoninputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/daltoninputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/daltoninputdialog.h:13, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/daltoninputdialog.cpp:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/gamessukinputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/gamessukinputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessukinputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessukinputdialog.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gamessukinputdialog.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/gaussianinputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/gaussianinputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gaussianinputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gaussianinputdialog.h:32, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/gaussianinputdialog.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/molproinputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/molproinputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/molproinputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/molproinputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/molproinputdialog.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ In file included from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/molproinputdialog.cpp:26:0: /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/molproinputdialog.h: In constructor 'Avogadro::MolproInputDialog::MolproInputDialog(QWidget*, Qt::WindowFlags)': /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/molproinputdialog.h:73:10: warning: 'Avogadro::MolproInputDialog::m_warned' will be initialized after [-Wreorder] bool m_warned; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/molproinputdialog.h:63:10: warning: 'bool Avogadro::MolproInputDialog::m_2009' [-Wreorder] bool m_2009; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/molproinputdialog.cpp:43:3: warning: when initialized here [-Wreorder] MolproInputDialog::MolproInputDialog(QWidget *parent, Qt::WindowFlags f) ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/mopacinputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/mopacinputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/mopacinputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/mopacinputdialog.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/mopacinputdialog.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/nwcheminputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/nwcheminputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/nwcheminputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/nwcheminputdialog.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/nwcheminputdialog.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/qcheminputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/qcheminputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/qcheminputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/qcheminputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/qcheminputdialog.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 63 [ 79%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/teracheminputdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/teracheminputdialog.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/teracheminputdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/teracheminputdialog.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput/teracheminputdialog.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 79%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_inputfileextension.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_inputfileextension.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_inputfileextension.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputfileextension.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_inputfileextension.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 79%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_inputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_inputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_inputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_inputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 79%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_abinitinputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_abinitinputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_abinitinputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/abinitinputdialog.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_abinitinputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 79%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_daltoninputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_daltoninputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_daltoninputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/daltoninputdialog.h:13, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_daltoninputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 79%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_gamessukinputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_gamessukinputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessukinputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessukinputdialog.h:30, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gamessukinputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 79%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_gaussianinputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_gaussianinputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gaussianinputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gaussianinputdialog.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_gaussianinputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 79%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_molproinputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_molproinputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_molproinputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/molproinputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_molproinputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 64 [ 80%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_mopacinputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_mopacinputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_mopacinputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/mopacinputdialog.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_mopacinputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 80%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_nwcheminputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_nwcheminputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_nwcheminputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/nwcheminputdialog.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_nwcheminputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 80%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_qcheminputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_qcheminputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_qcheminputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/qcheminputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_qcheminputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 80%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_teracheminputdialog.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dinputfileextension_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput -o CMakeFiles/inputfileextension.dir/moc_teracheminputdialog.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_teracheminputdialog.cxx In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/teracheminputdialog.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/moc_teracheminputdialog.cxx:10: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../../lib/inputfileextension.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput && /usr/bin/cmake -E cmake_link_script CMakeFiles/inputfileextension.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,inputfileextension.so -o ../../../../lib/inputfileextension.so CMakeFiles/inputfileextension.dir/inputfileextension.cpp.o CMakeFiles/inputfileextension.dir/inputdialog.cpp.o CMakeFiles/inputfileextension.dir/abinitinputdialog.cpp.o CMakeFiles/inputfileextension.dir/daltoninputdialog.cpp.o CMakeFiles/inputfileextension.dir/gamessukinputdialog.cpp.o CMakeFiles/inputfileextension.dir/gaussianinputdialog.cpp.o CMakeFiles/inputfileextension.dir/molproinputdialog.cpp.o CMakeFiles/inputfileextension.dir/mopacinputdialog.cpp.o CMakeFiles/inputfileextension.dir/nwcheminputdialog.cpp.o CMakeFiles/inputfileextension.dir/qcheminputdialog.cpp.o CMakeFiles/inputfileextension.dir/teracheminputdialog.cpp.o CMakeFiles/inputfileextension.dir/moc_inputfileextension.cxx.o CMakeFiles/inputfileextension.dir/moc_inputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_abinitinputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_daltoninputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_gamessukinputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_gaussianinputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_molproinputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_mopacinputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_nwcheminputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_qcheminputdialog.cxx.o CMakeFiles/inputfileextension.dir/moc_teracheminputdialog.cxx.o ../../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 60 61 62 63 64 [ 80%] Built target inputfileextension make -f libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/build.make libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 80%] Generating moc_atomindexcolor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_atomindexcolor.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/DependInfo.cmake --color= Scanning dependencies of target atomindexcolor make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/build.make libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 80%] Building CXX object libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/atomindexcolor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Datomindexcolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/atomindexcolor.dir/atomindexcolor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/colors/atomindexcolor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/colors/atomindexcolor.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 80%] Building CXX object libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/moc_atomindexcolor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Datomindexcolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/atomindexcolor.dir/moc_atomindexcolor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_atomindexcolor.cxx Linking CXX shared module ../../../lib/atomindexcolor.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/cmake -E cmake_link_script CMakeFiles/atomindexcolor.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,atomindexcolor.so -o ../../../lib/atomindexcolor.so CMakeFiles/atomindexcolor.dir/atomindexcolor.cpp.o CMakeFiles/atomindexcolor.dir/moc_atomindexcolor.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 80%] Built target atomindexcolor make -f libavogadro/src/colors/CMakeFiles/chargecolor.dir/build.make libavogadro/src/colors/CMakeFiles/chargecolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 80%] Generating moc_chargecolor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_chargecolor.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/chargecolor.dir/DependInfo.cmake --color= Scanning dependencies of target chargecolor make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/chargecolor.dir/build.make libavogadro/src/colors/CMakeFiles/chargecolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 44 [ 81%] Building CXX object libavogadro/src/colors/CMakeFiles/chargecolor.dir/chargecolor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dchargecolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/chargecolor.dir/chargecolor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/colors/chargecolor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/colors/chargecolor.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 81%] Building CXX object libavogadro/src/colors/CMakeFiles/chargecolor.dir/moc_chargecolor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dchargecolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/chargecolor.dir/moc_chargecolor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_chargecolor.cxx Linking CXX shared module ../../../lib/chargecolor.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/cmake -E cmake_link_script CMakeFiles/chargecolor.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,chargecolor.so -o ../../../lib/chargecolor.so CMakeFiles/chargecolor.dir/chargecolor.cpp.o CMakeFiles/chargecolor.dir/moc_chargecolor.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 44 [ 81%] Built target chargecolor make -f libavogadro/src/colors/CMakeFiles/customcolor.dir/build.make libavogadro/src/colors/CMakeFiles/customcolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 81%] Generating moc_customcolor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_customcolor.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/customcolor.dir/DependInfo.cmake --color= Scanning dependencies of target customcolor make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/customcolor.dir/build.make libavogadro/src/colors/CMakeFiles/customcolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 50 [ 82%] Building CXX object libavogadro/src/colors/CMakeFiles/customcolor.dir/customcolor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcustomcolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/customcolor.dir/customcolor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/colors/customcolor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/colors/customcolor.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/colors/CMakeFiles/customcolor.dir/moc_customcolor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dcustomcolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/customcolor.dir/moc_customcolor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_customcolor.cxx Linking CXX shared module ../../../lib/customcolor.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/cmake -E cmake_link_script CMakeFiles/customcolor.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,customcolor.so -o ../../../lib/customcolor.so CMakeFiles/customcolor.dir/customcolor.cpp.o CMakeFiles/customcolor.dir/moc_customcolor.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 50 [ 82%] Built target customcolor make -f libavogadro/src/colors/CMakeFiles/distancecolor.dir/build.make libavogadro/src/colors/CMakeFiles/distancecolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Generating moc_distancecolor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_distancecolor.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/distancecolor.dir/DependInfo.cmake --color= Scanning dependencies of target distancecolor make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/distancecolor.dir/build.make libavogadro/src/colors/CMakeFiles/distancecolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/colors/CMakeFiles/distancecolor.dir/distancecolor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Ddistancecolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/distancecolor.dir/distancecolor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/colors/distancecolor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/colors/distancecolor.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/colors/CMakeFiles/distancecolor.dir/moc_distancecolor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Ddistancecolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/distancecolor.dir/moc_distancecolor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_distancecolor.cxx Linking CXX shared module ../../../lib/distancecolor.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/cmake -E cmake_link_script CMakeFiles/distancecolor.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,distancecolor.so -o ../../../lib/distancecolor.so CMakeFiles/distancecolor.dir/distancecolor.cpp.o CMakeFiles/distancecolor.dir/moc_distancecolor.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Built target distancecolor make -f libavogadro/src/colors/CMakeFiles/residuecolor.dir/build.make libavogadro/src/colors/CMakeFiles/residuecolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Generating ui_residuecolorsettings.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/ui_residuecolorsettings.h /build/buildd/avogadro-1.1.0/libavogadro/src/colors/residuecolorsettings.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Generating moc_residuecolor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_residuecolor.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/residuecolor.dir/DependInfo.cmake --color= Scanning dependencies of target residuecolor make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/residuecolor.dir/build.make libavogadro/src/colors/CMakeFiles/residuecolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/colors/CMakeFiles/residuecolor.dir/residuecolor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dresiduecolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/residuecolor.dir/residuecolor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/colors/residuecolor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/fragment.h:28, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/residue.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/colors/residuecolor.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/colors/CMakeFiles/residuecolor.dir/moc_residuecolor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dresiduecolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/residuecolor.dir/moc_residuecolor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_residuecolor.cxx Linking CXX shared module ../../../lib/residuecolor.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/cmake -E cmake_link_script CMakeFiles/residuecolor.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,residuecolor.so -o ../../../lib/residuecolor.so CMakeFiles/residuecolor.dir/residuecolor.cpp.o CMakeFiles/residuecolor.dir/moc_residuecolor.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Built target residuecolor make -f libavogadro/src/colors/CMakeFiles/smartscolor.dir/build.make libavogadro/src/colors/CMakeFiles/smartscolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Generating moc_smartscolor.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_smartscolor.cxx_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/smartscolor.dir/DependInfo.cmake --color= Scanning dependencies of target smartscolor make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/smartscolor.dir/build.make libavogadro/src/colors/CMakeFiles/smartscolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/colors/CMakeFiles/smartscolor.dir/smartscolor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsmartscolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/smartscolor.dir/smartscolor.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/colors/smartscolor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/colors/smartscolor.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/colors/smartscolor.cpp: In member function 'virtual void Avogadro::SmartsColor::setFromPrimitive(const Avogadro::Primitive*)': /build/buildd/avogadro-1.1.0/libavogadro/src/colors/smartscolor.cpp:155:52: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (atom->index() == ((*match)[idx] - 1)) { // TODO: OB uses index from 1 ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/colors/CMakeFiles/smartscolor.dir/moc_smartscolor.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -D_BSD_SOURCE -Dsmartscolor_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors -o CMakeFiles/smartscolor.dir/moc_smartscolor.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/moc_smartscolor.cxx Linking CXX shared module ../../../lib/smartscolor.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors && /usr/bin/cmake -E cmake_link_script CMakeFiles/smartscolor.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,smartscolor.so -o ../../../lib/smartscolor.so CMakeFiles/smartscolor.dir/smartscolor.cpp.o CMakeFiles/smartscolor.dir/moc_smartscolor.cxx.o ../../../lib/libavogadro.so.1.1.0 -lQtCore -lQtGui -lopenbabel -lGLU -lGL -lX11 -lXext -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Built target smartscolor make -f libavogadro/src/python/CMakeFiles/python-module.dir/build.make libavogadro/src/python/CMakeFiles/python-module.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Generating moleculelist.moc cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python/moleculelist.moc_parameters cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/python /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python/CMakeFiles/python-module.dir/DependInfo.cmake --color= Scanning dependencies of target python-module make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/python/CMakeFiles/python-module.dir/build.make libavogadro/src/python/CMakeFiles/python-module.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/camera.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/camera.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/camera.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/camera.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/camera.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/moleculefile.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/moleculefile.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/moleculefile.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/moleculefile.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/moleculefile.cpp:5: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/mesh.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/mesh.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/mesh.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/mesh.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/mesh.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/toolgroup.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/toolgroup.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/toolgroup.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/toolgroup.cpp:6: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/sip.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/sip.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/sip.cpp In file included from /build/buildd/avogadro-1.1.0/libavogadro/src/python/sip.cpp:4:0: /usr/include/python2.7/sip.h:649:17: warning: comma at end of enumerator list [-Wpedantic] setattr_slot, /* __setattr__, __delattr__ */ ^ In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/atom.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/sip.cpp:7: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/qstring.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/qstring.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/qstring.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 76 [ 83%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/cube.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/cube.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/cube.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/cube.cpp:5: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 83%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/extension.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/extension.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/extension.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/extension.cpp:5: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 83%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/animation.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/animation.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/animation.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/animation.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/animation.cpp:5: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 83%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/eigen.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/eigen.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp In file included from /usr/include/python2.7/numpy/ndarraytypes.h:1728:0, from /usr/include/python2.7/numpy/ndarrayobject.h:17, from /usr/include/python2.7/numpy/arrayobject.h:15, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:3: /usr/include/python2.7/numpy/npy_deprecated_api.h:11:2: warning: #warning is a GCC extension [enabled by default] #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" ^ /usr/include/python2.7/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] In file included from /usr/include/python2.7/numpy/ndarrayobject.h:17:0, from /usr/include/python2.7/numpy/arrayobject.h:15, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:3: /usr/include/python2.7/numpy/ndarraytypes.h:208:68: warning: comma at end of enumerator list [-Wpedantic] NPY_INTERNAL_UNSAFE_CASTING_BUT_WARN_UNLESS_SAME_KIND = 100, ^ In file included from /usr/include/python2.7/numpy/ndarrayobject.h:26:0, from /usr/include/python2.7/numpy/arrayobject.h:15, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:3: /usr/include/python2.7/numpy/__multiarray_api.h: In function 'int _import_array()': /usr/include/python2.7/numpy/__multiarray_api.h:804:23: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_API[0]) ^ /usr/include/python2.7/numpy/__multiarray_api.h:1633:22: note: in expansion of macro 'PyArray_GetNDArrayCVersion' if (NPY_VERSION != PyArray_GetNDArrayCVersion()) { ^ /usr/include/python2.7/numpy/__multiarray_api.h:804:23: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_API[0]) ^ /usr/include/python2.7/numpy/__multiarray_api.h:1636:39: note: in expansion of macro 'PyArray_GetNDArrayCVersion' (int) NPY_VERSION, (int) PyArray_GetNDArrayCVersion()); ^ /usr/include/python2.7/numpy/__multiarray_api.h:1359:25: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_API[211]) ^ /usr/include/python2.7/numpy/__multiarray_api.h:1639:29: note: in expansion of macro 'PyArray_GetNDArrayCFeatureVersion' if (NPY_FEATURE_VERSION > PyArray_GetNDArrayCFeatureVersion()) { ^ /usr/include/python2.7/numpy/__multiarray_api.h:1359:25: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_API[211]) ^ /usr/include/python2.7/numpy/__multiarray_api.h:1642:47: note: in expansion of macro 'PyArray_GetNDArrayCFeatureVersion' (int) NPY_FEATURE_VERSION, (int) PyArray_GetNDArrayCFeatureVersion()); ^ /usr/include/python2.7/numpy/__multiarray_api.h:1356:25: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_API[210]) ^ /usr/include/python2.7/numpy/__multiarray_api.h:1650:8: note: in expansion of macro 'PyArray_GetEndianness' st = PyArray_GetEndianness(); ^ In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:8: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ In file included from /usr/include/python2.7/numpy/ndarrayobject.h:26:0, from /usr/include/python2.7/numpy/arrayobject.h:15, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:3: /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In static member function 'static PyObject* Transform3d_to_python_array::innerclass::convert(const Transform3d&)': /usr/include/python2.7/numpy/__multiarray_api.h:1005:24: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_API[93]) ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:9: note: in expansion of macro 'PyArray_New' PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:311:28: note: in expansion of macro 'PyArray_SimpleNew' PyObject *result = PyArray_SimpleNew(2, dims, PyArray_DOUBLE); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In static member function 'static PyObject* Transform3d_to_python_array::innerclass::convert(Eigen::Transform3d*)': /usr/include/python2.7/numpy/__multiarray_api.h:1005:24: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_API[93]) ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:9: note: in expansion of macro 'PyArray_New' PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:327:28: note: in expansion of macro 'PyArray_SimpleNew' PyObject *result = PyArray_SimpleNew(2, dims, PyArray_DOUBLE); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In static member function 'static PyObject* Transform3d_to_python_array::innerclass::convert(const Transform3d*)': /usr/include/python2.7/numpy/__multiarray_api.h:1005:24: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_API[93]) ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:9: note: in expansion of macro 'PyArray_New' PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:343:28: note: in expansion of macro 'PyArray_SimpleNew' PyObject *result = PyArray_SimpleNew(2, dims, PyArray_DOUBLE); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static void* Vector3x_from_python_array::convertible(PyObject*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:145:39: required from 'Vector3x_from_python_array::Vector3x_from_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:522:47: required from here /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:226:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:237:90: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:237:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:241:88: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:241:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static void Vector3x_from_python_array::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:145:53: required from 'Vector3x_from_python_array::Vector3x_from_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:522:47: required from here /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:262:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static void* Vector3x_from_python_array::convert(PyObject*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:155:36: required from 'Vector3x_from_python_array::Vector3x_from_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:522:47: required from here /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:164:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:175:90: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:175:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:179:88: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:179:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:192:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static void* Vector3x_from_python_array::convertible(PyObject*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:145:39: required from 'Vector3x_from_python_array::Vector3x_from_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:525:47: required from here /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:226:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:237:90: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:237:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:241:88: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:241:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static void Vector3x_from_python_array::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:145:53: required from 'Vector3x_from_python_array::Vector3x_from_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:525:47: required from here /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:262:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static void* Vector3x_from_python_array::convert(PyObject*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:155:36: required from 'Vector3x_from_python_array::Vector3x_from_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:525:47: required from here /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:164:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:175:90: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:175:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:179:88: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:179:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:192:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static void* Vector3x_from_python_array::convertible(PyObject*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:145:39: required from 'Vector3x_from_python_array::Vector3x_from_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:528:47: required from here /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:226:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:237:90: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:237:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:241:88: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:241:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static void Vector3x_from_python_array::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:145:53: required from 'Vector3x_from_python_array::Vector3x_from_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:528:47: required from here /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:262:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static void* Vector3x_from_python_array::convert(PyObject*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:155:36: required from 'Vector3x_from_python_array::Vector3x_from_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:528:47: required from here /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:164:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:175:90: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:175:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_FLOAT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_DOUBLE)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:179:88: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:179:41: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] if ((PyArray_ObjectType(obj_ptr, 0) == NPY_INT) || (PyArray_ObjectType(obj_ptr, 0) == NPY_LONG)) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:192:44: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] switch (PyArray_ObjectType(obj_ptr, 0)) { ^ In file included from /usr/include/python2.7/numpy/arrayobject.h:15:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:3: /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static PyObject* Vector3x_to_python_array::innerclass::convert(const Vector3x&) [with Vector3x = Eigen::Matrix; PyObject = _object]': /usr/include/boost/python/converter/as_to_python_function.hpp:27:83: required from 'static PyObject* boost::python::converter::as_to_python_function::convert(const void*) [with T = Eigen::Matrix; ToPython = Vector3x_to_python_array >::innerclass; PyObject = _object]' /usr/include/boost/python/to_python_converter.hpp:88:9: required from 'boost::python::to_python_converter::to_python_converter() [with T = Eigen::Matrix; Conversion = Vector3x_to_python_array >::innerclass; bool has_get_pytype = false]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:120:7: required from 'Vector3x_to_python_array::Vector3x_to_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:521:45: required from here /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:50:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_INT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:52:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_FLOAT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:54:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_DOUBLE); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static PyObject* Vector3x_to_python_array::innerclass::convert(Vector3x*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /usr/include/boost/python/converter/as_to_python_function.hpp:27:83: required from 'static PyObject* boost::python::converter::as_to_python_function::convert(const void*) [with T = Eigen::Matrix*; ToPython = Vector3x_to_python_array >::innerclass; PyObject = _object]' /usr/include/boost/python/to_python_converter.hpp:88:9: required from 'boost::python::to_python_converter::to_python_converter() [with T = Eigen::Matrix*; Conversion = Vector3x_to_python_array >::innerclass; bool has_get_pytype = false]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:121:7: required from 'Vector3x_to_python_array::Vector3x_to_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:521:45: required from here /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:76:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_INT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:78:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_FLOAT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:80:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_DOUBLE); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static PyObject* Vector3x_to_python_array::innerclass::convert(const Vector3x*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /usr/include/boost/python/converter/as_to_python_function.hpp:27:83: required from 'static PyObject* boost::python::converter::as_to_python_function::convert(const void*) [with T = const Eigen::Matrix*; ToPython = Vector3x_to_python_array >::innerclass; PyObject = _object]' /usr/include/boost/python/to_python_converter.hpp:88:9: required from 'boost::python::to_python_converter::to_python_converter() [with T = const Eigen::Matrix*; Conversion = Vector3x_to_python_array >::innerclass; bool has_get_pytype = false]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:122:7: required from 'Vector3x_to_python_array::Vector3x_to_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:521:45: required from here /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:102:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_INT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:104:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_FLOAT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:106:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_DOUBLE); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static PyObject* Vector3x_to_python_array::innerclass::convert(const Vector3x&) [with Vector3x = Eigen::Matrix; PyObject = _object]': /usr/include/boost/python/converter/as_to_python_function.hpp:27:83: required from 'static PyObject* boost::python::converter::as_to_python_function::convert(const void*) [with T = Eigen::Matrix; ToPython = Vector3x_to_python_array >::innerclass; PyObject = _object]' /usr/include/boost/python/to_python_converter.hpp:88:9: required from 'boost::python::to_python_converter::to_python_converter() [with T = Eigen::Matrix; Conversion = Vector3x_to_python_array >::innerclass; bool has_get_pytype = false]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:120:7: required from 'Vector3x_to_python_array::Vector3x_to_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:524:45: required from here /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:50:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_INT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:52:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_FLOAT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:54:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_DOUBLE); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static PyObject* Vector3x_to_python_array::innerclass::convert(Vector3x*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /usr/include/boost/python/converter/as_to_python_function.hpp:27:83: required from 'static PyObject* boost::python::converter::as_to_python_function::convert(const void*) [with T = Eigen::Matrix*; ToPython = Vector3x_to_python_array >::innerclass; PyObject = _object]' /usr/include/boost/python/to_python_converter.hpp:88:9: required from 'boost::python::to_python_converter::to_python_converter() [with T = Eigen::Matrix*; Conversion = Vector3x_to_python_array >::innerclass; bool has_get_pytype = false]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:121:7: required from 'Vector3x_to_python_array::Vector3x_to_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:524:45: required from here /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:76:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_INT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:78:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_FLOAT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:80:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_DOUBLE); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static PyObject* Vector3x_to_python_array::innerclass::convert(const Vector3x*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /usr/include/boost/python/converter/as_to_python_function.hpp:27:83: required from 'static PyObject* boost::python::converter::as_to_python_function::convert(const void*) [with T = const Eigen::Matrix*; ToPython = Vector3x_to_python_array >::innerclass; PyObject = _object]' /usr/include/boost/python/to_python_converter.hpp:88:9: required from 'boost::python::to_python_converter::to_python_converter() [with T = const Eigen::Matrix*; Conversion = Vector3x_to_python_array >::innerclass; bool has_get_pytype = false]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:122:7: required from 'Vector3x_to_python_array::Vector3x_to_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:524:45: required from here /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:102:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_INT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:104:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_FLOAT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:106:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_DOUBLE); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static PyObject* Vector3x_to_python_array::innerclass::convert(const Vector3x&) [with Vector3x = Eigen::Matrix; PyObject = _object]': /usr/include/boost/python/converter/as_to_python_function.hpp:27:83: required from 'static PyObject* boost::python::converter::as_to_python_function::convert(const void*) [with T = Eigen::Matrix; ToPython = Vector3x_to_python_array >::innerclass; PyObject = _object]' /usr/include/boost/python/to_python_converter.hpp:88:9: required from 'boost::python::to_python_converter::to_python_converter() [with T = Eigen::Matrix; Conversion = Vector3x_to_python_array >::innerclass; bool has_get_pytype = false]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:120:7: required from 'Vector3x_to_python_array::Vector3x_to_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:527:45: required from here /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:50:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_INT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:52:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_FLOAT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:54:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_DOUBLE); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static PyObject* Vector3x_to_python_array::innerclass::convert(Vector3x*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /usr/include/boost/python/converter/as_to_python_function.hpp:27:83: required from 'static PyObject* boost::python::converter::as_to_python_function::convert(const void*) [with T = Eigen::Matrix*; ToPython = Vector3x_to_python_array >::innerclass; PyObject = _object]' /usr/include/boost/python/to_python_converter.hpp:88:9: required from 'boost::python::to_python_converter::to_python_converter() [with T = Eigen::Matrix*; Conversion = Vector3x_to_python_array >::innerclass; bool has_get_pytype = false]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:121:7: required from 'Vector3x_to_python_array::Vector3x_to_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:527:45: required from here /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:76:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_INT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:78:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_FLOAT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:80:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_DOUBLE); ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp: In instantiation of 'static PyObject* Vector3x_to_python_array::innerclass::convert(const Vector3x*) [with Vector3x = Eigen::Matrix; PyObject = _object]': /usr/include/boost/python/converter/as_to_python_function.hpp:27:83: required from 'static PyObject* boost::python::converter::as_to_python_function::convert(const void*) [with T = const Eigen::Matrix*; ToPython = Vector3x_to_python_array >::innerclass; PyObject = _object]' /usr/include/boost/python/to_python_converter.hpp:88:9: required from 'boost::python::to_python_converter::to_python_converter() [with T = const Eigen::Matrix*; Conversion = Vector3x_to_python_array >::innerclass; bool has_get_pytype = false]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:122:7: required from 'Vector3x_to_python_array::Vector3x_to_python_array() [with Vector3x = Eigen::Matrix]' /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:527:45: required from here /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:102:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_INT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:104:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_FLOAT); ^ /usr/include/python2.7/numpy/ndarrayobject.h:126:77: warning: ISO C++ forbids casting between pointer-to-function and pointer-to-object [enabled by default] PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/eigen.cpp:106:20: note: in expansion of macro 'PyArray_SimpleNew' result = PyArray_SimpleNew(1, dims, NPY_DOUBLE); ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 83%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/tool.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/tool.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/tool.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/tool.cpp:6: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 83%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/std_vector.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/std_vector.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/std_vector.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/std_vector.cpp:6: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 83%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/painterdevice.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/painterdevice.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/painterdevice.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/painter.h:33, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/painterdevice.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/painterdevice.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 83%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/primitive.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/primitive.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/primitive.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/primitive.cpp:5: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 77 [ 84%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/color.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/color.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/color.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/color.cpp:6: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 84%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/main.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/main.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/main.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 84%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/molecule.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/molecule.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/molecule.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/molecule.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 84%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/pluginmanager.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/pluginmanager.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/pluginmanager.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/pluginmanager.cpp:8: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 84%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/meshgenerator.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/meshgenerator.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/meshgenerator.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/meshgenerator.h:30, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/meshgenerator.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 84%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/moleculelist.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/moleculelist.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/moleculelist.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/moleculelist.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 84%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/periodictableview.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/periodictableview.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/periodictableview.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 84%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/qlist.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/qlist.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/qlist.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/atom.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/qlist.cpp:8: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 78 [ 85%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/residue.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/residue.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/residue.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/residue.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 85%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/plugin.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/plugin.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/plugin.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 85%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/fragment.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/fragment.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/fragment.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/fragment.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 85%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/primitivelist.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/primitivelist.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/primitivelist.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/primitivelist.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 85%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/navigate.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/navigate.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/navigate.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/navigate.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/navigate.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 85%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/glwidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/glwidget.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/glwidget.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/atom.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/glwidget.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 85%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/swig.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/swig.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/swig.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/swig.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/libavogadro/src/python/swig.cpp: In function 'PyTypeObject* _PySwigObject_type()': /build/buildd/avogadro-1.1.0/libavogadro/src/python/swig.cpp:480:7: warning: missing initializer for member '_typeobject::tp_version_tag' [-Wmissing-field-initializers] }; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 85%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/elementtranslator.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/elementtranslator.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/elementtranslator.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 79 [ 86%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/engine.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/engine.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/engine.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/engine.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 86%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/neighborlist.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/neighborlist.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/neighborlist.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/molecule.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/neighborlist.h:28, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/neighborlist.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 86%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/atom.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/atom.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/atom.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/atom.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 86%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/bond.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/bond.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/bond.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/atom.h:31, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/bond.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 86%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/painter.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -Dpython_module_EXPORTS -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -fPIC -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtCore -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.7 -I/build/buildd/avogadro-1.1.0/libavogadro/include -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python -I/usr/lib/python2.7/dist-packages/numpy/core/include -o CMakeFiles/python-module.dir/painter.cpp.o -c /build/buildd/avogadro-1.1.0/libavogadro/src/python/painter.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/painter.h:33, from /build/buildd/avogadro-1.1.0/libavogadro/src/python/painter.cpp:4: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ Linking CXX shared module ../../../lib/Avogadro.so cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/python-module.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,Avogadro.so -o ../../../lib/Avogadro.so CMakeFiles/python-module.dir/camera.cpp.o CMakeFiles/python-module.dir/moleculefile.cpp.o CMakeFiles/python-module.dir/mesh.cpp.o CMakeFiles/python-module.dir/toolgroup.cpp.o CMakeFiles/python-module.dir/sip.cpp.o CMakeFiles/python-module.dir/qstring.cpp.o CMakeFiles/python-module.dir/cube.cpp.o CMakeFiles/python-module.dir/extension.cpp.o CMakeFiles/python-module.dir/animation.cpp.o CMakeFiles/python-module.dir/eigen.cpp.o CMakeFiles/python-module.dir/tool.cpp.o CMakeFiles/python-module.dir/std_vector.cpp.o CMakeFiles/python-module.dir/painterdevice.cpp.o CMakeFiles/python-module.dir/primitive.cpp.o CMakeFiles/python-module.dir/color.cpp.o CMakeFiles/python-module.dir/main.cpp.o CMakeFiles/python-module.dir/molecule.cpp.o CMakeFiles/python-module.dir/pluginmanager.cpp.o CMakeFiles/python-module.dir/meshgenerator.cpp.o CMakeFiles/python-module.dir/moleculelist.cpp.o CMakeFiles/python-module.dir/periodictableview.cpp.o CMakeFiles/python-module.dir/qlist.cpp.o CMakeFiles/python-module.dir/residue.cpp.o CMakeFiles/python-module.dir/plugin.cpp.o CMakeFiles/python-module.dir/fragment.cpp.o CMakeFiles/python-module.dir/primitivelist.cpp.o CMakeFiles/python-module.dir/navigate.cpp.o CMakeFiles/python-module.dir/glwidget.cpp.o CMakeFiles/python-module.dir/swig.cpp.o CMakeFiles/python-module.dir/elementtranslator.cpp.o CMakeFiles/python-module.dir/engine.cpp.o CMakeFiles/python-module.dir/neighborlist.cpp.o CMakeFiles/python-module.dir/atom.cpp.o CMakeFiles/python-module.dir/bond.cpp.o CMakeFiles/python-module.dir/painter.cpp.o -lstdc++ ../../../lib/libavogadro.so.1.1.0 -lQtOpenGL -lQtGui -lQtCore -lpython2.7 -lboost_python -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 76 77 78 79 [ 86%] Built target python-module make -f avogadro/src/CMakeFiles/avogadro-app.dir/build.make avogadro/src/CMakeFiles/avogadro-app.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 86%] Generating avogadro_pt_BR.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/pt_BR.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pt_BR.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pt_BR.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pt_BR.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pt_BR.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 86%] Generating detachedview.moc cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/detachedview.moc_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 86%] Generating application.moc cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/application.moc_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 86%] Generating mainwindow.moc cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/mainwindow.moc_parameters /usr/bin/cmake -E cmake_progress_report 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/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/engineviewwidget.moc_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 89%] Generating moleculedelegate.moc cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/moleculedelegate.moc_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 89%] Generating selectiondelegate.moc cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/selectiondelegate.moc_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 89%] Generating residuedelegate.moc cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/residuedelegate.moc_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 89%] Generating labeldelegate.moc cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/labeldelegate.moc_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 89%] Generating atomdelegate.moc cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/atomdelegate.moc_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 30 [ 90%] Generating bonddelegate.moc cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/moc @/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/bonddelegate.moc_parameters /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 90%] Generating ui_projecttreeeditor.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/ui_projecttreeeditor.h /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeeditor.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 90%] Generating ui_engineprimitiveswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/ui_engineprimitiveswidget.h /build/buildd/avogadro-1.1.0/avogadro/src/engineprimitiveswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 90%] Generating ui_enginecolorswidget.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/ui_enginecolorswidget.h /build/buildd/avogadro-1.1.0/avogadro/src/enginecolorswidget.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 90%] Generating ui_addenginedialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/ui_addenginedialog.h /build/buildd/avogadro-1.1.0/avogadro/src/addenginedialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 90%] Generating ui_mainwindow.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/ui_mainwindow.h /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 90%] Generating ui_settingsdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/ui_settingsdialog.h /build/buildd/avogadro-1.1.0/avogadro/src/settingsdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 90%] Generating ui_pluginsettings.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/ui_pluginsettings.h /build/buildd/avogadro-1.1.0/avogadro/src/pluginsettings.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 31 [ 91%] Generating ui_importdialog.h cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/uic -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/ui_importdialog.h /build/buildd/avogadro-1.1.0/avogadro/src/importdialog.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 91%] Generating qrc_avogadro.cxx cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/lib/i386-linux-gnu/qt4/bin/rcc -name avogadro -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/qrc_avogadro.cxx /build/buildd/avogadro-1.1.0/avogadro/src/avogadro.qrc /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 91%] Generating avogadro_id.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/id.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_id.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_id.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_id.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_id.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 91%] Generating avogadro_ko.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/ko.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ko.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ko.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ko.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ko.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 91%] Generating avogadro_fi.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/fi.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_fi.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_fi.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_fi.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_fi.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 91%] Generating avogadro_af.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/af.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_af.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_af.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_af.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_af.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 91%] Generating avogadro_en_CA.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/en_CA.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_CA.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_CA.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_CA.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_CA.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 91%] Generating avogadro_he.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/he.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_he.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_he.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_he.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_he.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 32 [ 92%] Generating avogadro_it.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/it.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_it.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_it.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_it.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_it.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 92%] Generating avogadro_en_AU.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/en_AU.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_AU.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_AU.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_AU.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_AU.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 92%] Generating avogadro_vi.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/vi.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_vi.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_vi.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_vi.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_vi.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 92%] Generating avogadro_de.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/de.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_de.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_de.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_de.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_de.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 92%] Generating avogadro_es.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/es.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_es.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_es.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_es.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_es.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 92%] Generating avogadro_hu.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/hu.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_hu.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_hu.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_hu.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_hu.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 92%] Generating avogadro_eu.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/eu.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_eu.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_eu.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_eu.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_eu.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 92%] Generating avogadro_oc.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/oc.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_oc.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_oc.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_oc.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_oc.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 33 [ 93%] Generating avogadro_el.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/el.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_el.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_el.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_el.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_el.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 93%] Generating avogadro_nb.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/nb.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_nb.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_nb.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_nb.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_nb.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 93%] Generating avogadro_pt.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/pt.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pt.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pt.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pt.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pt.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 93%] Generating avogadro_en_GB.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/en_GB.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_GB.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_GB.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_GB.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_en_GB.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 93%] Generating avogadro_sv.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/sv.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sv.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sv.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sv.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sv.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 93%] Generating avogadro_ca.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/ca.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ca.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ca.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ca.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ca.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 93%] Generating avogadro_ca@valencia.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/ca@valencia.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ca@valencia.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ca@valencia.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ca@valencia.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ca@valencia.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 93%] Generating avogadro_ug.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/ug.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ug.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ug.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ug.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ug.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 93%] Generating avogadro_nl.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/nl.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_nl.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_nl.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_nl.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_nl.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 34 [ 94%] Generating avogadro_th.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/th.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_th.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_th.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_th.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_th.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 94%] Generating avogadro_da.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/da.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_da.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_da.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_da.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_da.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 94%] Generating avogadro_ar.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/ar.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ar.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ar.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ar.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ar.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 94%] Generating avogadro_sr.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/sr.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sr.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sr.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sr.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sr.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 94%] Generating avogadro_hr.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/hr.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_hr.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_hr.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_hr.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_hr.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 94%] Generating avogadro_gl.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/gl.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_gl.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_gl.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_gl.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_gl.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 94%] Generating avogadro_ja.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/ja.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ja.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ja.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ja.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ja.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 94%] Generating avogadro_bg.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/bg.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_bg.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_bg.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_bg.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_bg.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 35 [ 95%] Generating avogadro_tr.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/tr.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_tr.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_tr.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_tr.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_tr.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 95%] Generating avogadro_pl.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/pl.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pl.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pl.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pl.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_pl.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 95%] Generating avogadro_ru.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/ru.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ru.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ru.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ru.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_ru.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 95%] Generating avogadro_zh_CN.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/zh_CN.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_zh_CN.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_zh_CN.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_zh_CN.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_zh_CN.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 95%] Generating avogadro_sk.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/sk.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sk.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sk.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sk.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_sk.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 95%] Generating avogadro_cs.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/cs.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_cs.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_cs.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_cs.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_cs.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 95%] Generating avogadro_fr.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/fr.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_fr.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_fr.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_fr.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_fr.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 95%] Generating avogadro_zh_TW.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/zh_TW.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_zh_TW.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_zh_TW.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_zh_TW.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_zh_TW.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 36 [ 96%] Generating avogadro_kn.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/kn.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_kn.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_kn.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_kn.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_kn.qm /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 96%] Generating avogadro_uk.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lconvert -i /build/buildd/avogadro-1.1.0/i18n/avogadro/uk.po -o /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_uk.ts cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lupdate-qt4 /build/buildd/avogadro-1.1.0/avogadro/src -silent -noobsolete -ts /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_uk.ts Scanning directory '/build/buildd/avogadro-1.1.0/avogadro/src'... cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/lrelease-qt4 -compress -removeidentical -silent /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_uk.ts -qm /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/avogadro_uk.qm cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/avogadro/src /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/CMakeFiles/avogadro-app.dir/DependInfo.cmake --color= Scanning dependencies of target avogadro-app make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f avogadro/src/CMakeFiles/avogadro-app.dir/build.make avogadro/src/CMakeFiles/avogadro-app.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/detachedview.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/detachedview.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/detachedview.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/avogadro/src/detachedview.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/editcommands.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/editcommands.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/editcommands.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/avogadro/src/editcommands.h:30, from /build/buildd/avogadro-1.1.0/avogadro/src/editcommands.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/application.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/application.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/application.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/application.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/mainwindow.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/mainwindow.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp: In member function 'bool Avogadro::MainWindow::parseText(OpenBabel::OBMol*, QString)': /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp:2039:9: warning: variable 'a' set but not used [-Wunused-but-set-variable] int a; ^ /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp: In function 'void Avogadro::poscarSort(QList*, QList >*, QList*, QList*)': /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp:2227:27: warning: variable 'idit_end' set but not used [-Wunused-but-set-variable] QStringList::iterator idit_end = ids->end(); ^ /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp:2229:38: warning: variable 'coordit_end' set but not used [-Wunused-but-set-variable] QList::iterator coordit_end = coords->end(); ^ /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp: In member function 'void Avogadro::MainWindow::showAndActivate()': /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp:2840:34: warning: suggest parentheses around arithmetic in operand of '|' [-Wparentheses] setWindowState(windowState() & ~Qt::WindowMinimized | Qt::WindowActive); ^ /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp: In member function 'bool Avogadro::MainWindow::parseText(OpenBabel::OBMol*, QString)': /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp:2178:17: warning: '_n' may be used uninitialized in this function [-Wmaybe-uninitialized] if (_n==0) ^ /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp:2184:41: warning: 'z' may be used uninitialized in this function [-Wmaybe-uninitialized] atom->SetVector(x*k,y*k,z*k); //set coordinates ^ /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp:2184:41: warning: 'y' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp:2184:41: warning: 'x' may be used uninitialized in this function [-Wmaybe-uninitialized] /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projecttreeitem.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/projecttreeitem.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeitem.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeitem.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeitem.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 37 [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/engineitemmodel.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/engineitemmodel.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/engineitemmodel.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/avogadro/src/engineitemmodel.cpp:28: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projecttreemodel.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/projecttreemodel.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/projecttreemodel.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeitem.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreemodel.h:30, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreemodel.cpp:25: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/enginecolorswidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/enginecolorswidget.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/enginecolorswidget.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/avogadro/src/enginecolorswidget.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/engineprimitiveswidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/engineprimitiveswidget.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/engineprimitiveswidget.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/avogadro/src/engineprimitiveswidget.cpp:30: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/pluginlistview.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/pluginlistview.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/pluginlistview.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/enginelistview.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/enginelistview.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/enginelistview.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/avogadro/src/enginelistview.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projecttreeeditor.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/projecttreeeditor.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeeditor.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeitem.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreemodel.h:30, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreemodeldelegate.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeeditor.h:48, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeeditor.cpp:26: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/glgraphicsview.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/glgraphicsview.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/glgraphicsview.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/glwidget.h:32, from /build/buildd/avogadro-1.1.0/avogadro/src/glgraphicsview.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 38 [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/aboutdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/aboutdialog.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/aboutdialog.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/importdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/importdialog.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/importdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/importdialog.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/primitivetreeview.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/primitivetreeview.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/primitivetreeview.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/avogadro/src/primitivetreeview.cpp:29: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/settingsdialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/settingsdialog.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/settingsdialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeitem.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreemodel.h:30, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreemodeldelegate.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeeditor.h:48, from /build/buildd/avogadro-1.1.0/avogadro/src/settingsdialog.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/main.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/main.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/main.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/main.cpp:50: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/pluginitemmodel.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/pluginitemmodel.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/pluginitemmodel.cpp /build/buildd/avogadro-1.1.0/avogadro/src/pluginitemmodel.cpp: In member function 'Avogadro::PluginItem* Avogadro::PluginItemModel::plugin(const QModelIndex&) const': /build/buildd/avogadro-1.1.0/avogadro/src/pluginitemmodel.cpp:126:14: warning: converting 'false' to pointer type 'Avogadro::PluginItem*' [-Wconversion-null] return false; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/pluginsettings.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/pluginsettings.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/pluginsettings.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/primitiveitemmodel.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/primitiveitemmodel.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/primitiveitemmodel.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/atom.h:31, from /build/buildd/avogadro-1.1.0/avogadro/src/primitiveitemmodel.cpp:31: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 39 [ 99%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/engineitemdelegate.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/engineitemdelegate.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/engineitemdelegate.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/avogadro/src/engineitemdelegate.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 99%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/addenginedialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/addenginedialog.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/addenginedialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/avogadro/src/addenginedialog.cpp:27: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 99%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/savedialog.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/savedialog.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/savedialog.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /usr/include/eigen2/Eigen/Geometry:4, from /build/buildd/avogadro-1.1.0/avogadro/src/mainwindow.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/savedialog.cpp:23: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 99%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projecttreemodeldelegate.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/projecttreemodeldelegate.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/projecttreemodeldelegate.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreeitem.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreemodel.h:30, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreemodeldelegate.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/projecttreemodeldelegate.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 99%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/flattabwidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/flattabwidget.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/flattabwidget.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 99%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/engineviewwidget.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/engineviewwidget.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/engineviewwidget.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/engine.h:37, from /build/buildd/avogadro-1.1.0/avogadro/src/engineviewwidget.cpp:30: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 99%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/moleculedelegate.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/projectdelegates/moleculedelegate.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/moleculedelegate.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreeitem.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodel.h:30, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodeldelegate.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/moleculedelegate.h:26, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/moleculedelegate.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 99%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/selectiondelegate.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/projectdelegates/selectiondelegate.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/selectiondelegate.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreeitem.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodel.h:30, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodeldelegate.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/selectiondelegate.h:26, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/selectiondelegate.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 40 [100%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/residuedelegate.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/projectdelegates/residuedelegate.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/residuedelegate.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreeitem.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodel.h:30, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodeldelegate.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/residuedelegate.h:26, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/residuedelegate.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [100%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/labeldelegate.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/projectdelegates/labeldelegate.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/labeldelegate.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreeitem.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodel.h:30, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodeldelegate.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/labeldelegate.h:26, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/labeldelegate.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [100%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/atomdelegate.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/projectdelegates/atomdelegate.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/atomdelegate.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreeitem.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodel.h:30, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodeldelegate.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/atomdelegate.h:26, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/atomdelegate.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [100%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/bonddelegate.cpp.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/projectdelegates/bonddelegate.cpp.o -c /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/bonddelegate.cpp In file included from /usr/include/eigen2/Eigen/Core:103:0, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitive.h:34, from /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include/avogadro/primitivelist.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreeitem.h:29, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodel.h:30, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/../projecttreemodeldelegate.h:27, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/bonddelegate.h:26, from /build/buildd/avogadro-1.1.0/avogadro/src/projectdelegates/bonddelegate.cpp:22: /usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)': /usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs] typedef typename ei_packet_traits::type Packet; ^ /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [100%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/qrc_avogadro.cxx.o cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/c++ -DENABLE_GLSL -DENABLE_PYTHON -DHAVE_GCC_VISIBILITY -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/include -I/build/buildd/avogadro-1.1.0/avogadro/src -I/usr/include/openbabel-2.0 -I/usr/include/eigen2 -I/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtNetwork -isystem /usr/include/qt4/QtCore -o CMakeFiles/avogadro-app.dir/qrc_avogadro.cxx.o -c /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/qrc_avogadro.cxx Linking CXX executable ../../bin/avogadro cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/avogadro-app.dir/link.txt --verbose=1 /usr/bin/c++ -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -g -DNDEBUG -Wnon-virtual-dtor -Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra -Wpointer-arith -Wformat-security -fno-check-new -fno-common -pedantic -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,defs -Wl,--as-needed CMakeFiles/avogadro-app.dir/detachedview.cpp.o CMakeFiles/avogadro-app.dir/editcommands.cpp.o CMakeFiles/avogadro-app.dir/application.cpp.o CMakeFiles/avogadro-app.dir/mainwindow.cpp.o CMakeFiles/avogadro-app.dir/projecttreeitem.cpp.o CMakeFiles/avogadro-app.dir/engineitemmodel.cpp.o CMakeFiles/avogadro-app.dir/projecttreemodel.cpp.o CMakeFiles/avogadro-app.dir/enginecolorswidget.cpp.o CMakeFiles/avogadro-app.dir/engineprimitiveswidget.cpp.o CMakeFiles/avogadro-app.dir/pluginlistview.cpp.o CMakeFiles/avogadro-app.dir/enginelistview.cpp.o CMakeFiles/avogadro-app.dir/projecttreeeditor.cpp.o CMakeFiles/avogadro-app.dir/glgraphicsview.cpp.o CMakeFiles/avogadro-app.dir/aboutdialog.cpp.o CMakeFiles/avogadro-app.dir/importdialog.cpp.o CMakeFiles/avogadro-app.dir/primitivetreeview.cpp.o CMakeFiles/avogadro-app.dir/settingsdialog.cpp.o CMakeFiles/avogadro-app.dir/main.cpp.o CMakeFiles/avogadro-app.dir/pluginitemmodel.cpp.o CMakeFiles/avogadro-app.dir/pluginsettings.cpp.o CMakeFiles/avogadro-app.dir/primitiveitemmodel.cpp.o CMakeFiles/avogadro-app.dir/engineitemdelegate.cpp.o CMakeFiles/avogadro-app.dir/addenginedialog.cpp.o CMakeFiles/avogadro-app.dir/savedialog.cpp.o CMakeFiles/avogadro-app.dir/projecttreemodeldelegate.cpp.o CMakeFiles/avogadro-app.dir/flattabwidget.cpp.o CMakeFiles/avogadro-app.dir/engineviewwidget.cpp.o CMakeFiles/avogadro-app.dir/projectdelegates/moleculedelegate.cpp.o CMakeFiles/avogadro-app.dir/projectdelegates/selectiondelegate.cpp.o CMakeFiles/avogadro-app.dir/projectdelegates/residuedelegate.cpp.o CMakeFiles/avogadro-app.dir/projectdelegates/labeldelegate.cpp.o CMakeFiles/avogadro-app.dir/projectdelegates/atomdelegate.cpp.o CMakeFiles/avogadro-app.dir/projectdelegates/bonddelegate.cpp.o CMakeFiles/avogadro-app.dir/qrc_avogadro.cxx.o -o ../../bin/avogadro -rdynamic -lQtOpenGL -lQtGui -lQtNetwork -lQtCore -lopenbabel ../../lib/libavogadro.so.1.1.0 -lX11 -lboost_python -Wl,-rpath,/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/lib: make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 27 28 29 30 31 32 33 34 35 36 37 38 39 40 [100%] Built target avogadro-app make[2]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' dh_auto_test -O--parallel /usr/bin/fakeroot debian/rules binary dh binary --with python2 --parallel dh_testroot -O--parallel dh_prep -O--parallel dh_installdirs -O--parallel dh_auto_install -O--parallel make[1]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -H/build/buildd/avogadro-1.1.0 -B/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/elementcolor.dir/build.make libavogadro/src/colors/CMakeFiles/elementcolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/elementcolor.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/elementcolor.dir/build.make libavogadro/src/colors/CMakeFiles/elementcolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/colors/CMakeFiles/elementcolor.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 52 [ 1%] Built target elementcolor make -f libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build.make libavogadro/src/engines/CMakeFiles/bsdyengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/bsdyengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build.make libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 42 [ 2%] Built target bsdyengine make -f libavogadro/src/tools/CMakeFiles/navigatetool.dir/build.make libavogadro/src/tools/CMakeFiles/navigatetool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/navigatetool.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/navigatetool.dir/build.make libavogadro/src/tools/CMakeFiles/navigatetool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/tools/CMakeFiles/navigatetool.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 69 [ 3%] Built target navigatetool make -f libavogadro/src/CMakeFiles/avogadro.dir/build.make libavogadro/src/CMakeFiles/avogadro.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/CMakeFiles/avogadro.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/CMakeFiles/avogadro.dir/build.make libavogadro/src/CMakeFiles/avogadro.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/CMakeFiles/avogadro.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 [ 24%] Built target avogadro make -f libavogadro/src/engines/CMakeFiles/axesengine.dir/build.make libavogadro/src/engines/CMakeFiles/axesengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/axesengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/axesengine.dir/build.make libavogadro/src/engines/CMakeFiles/axesengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/axesengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 41 [ 25%] Built target axesengine make -f libavogadro/src/engines/CMakeFiles/cartoonengine.dir/build.make libavogadro/src/engines/CMakeFiles/cartoonengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/cartoonengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/cartoonengine.dir/build.make libavogadro/src/engines/CMakeFiles/cartoonengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/cartoonengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Built target cartoonengine make -f libavogadro/src/engines/CMakeFiles/dipoleengine.dir/build.make libavogadro/src/engines/CMakeFiles/dipoleengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/dipoleengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/dipoleengine.dir/build.make libavogadro/src/engines/CMakeFiles/dipoleengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/dipoleengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 25%] Built target dipoleengine make -f libavogadro/src/engines/CMakeFiles/forceengine.dir/build.make libavogadro/src/engines/CMakeFiles/forceengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/forceengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/forceengine.dir/build.make libavogadro/src/engines/CMakeFiles/forceengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/forceengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 53 [ 26%] Built target forceengine make -f libavogadro/src/engines/CMakeFiles/hbondengine.dir/build.make libavogadro/src/engines/CMakeFiles/hbondengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/hbondengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/hbondengine.dir/build.make libavogadro/src/engines/CMakeFiles/hbondengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/hbondengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 26%] Built target hbondengine make -f libavogadro/src/engines/CMakeFiles/labelengine.dir/build.make libavogadro/src/engines/CMakeFiles/labelengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/labelengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/labelengine.dir/build.make libavogadro/src/engines/CMakeFiles/labelengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/labelengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 67 [ 27%] Built target labelengine make -f libavogadro/src/engines/CMakeFiles/polygonengine.dir/build.make libavogadro/src/engines/CMakeFiles/polygonengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/polygonengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/polygonengine.dir/build.make libavogadro/src/engines/CMakeFiles/polygonengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/polygonengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 73 [ 28%] Built target polygonengine make -f libavogadro/src/engines/CMakeFiles/qtaimengine.dir/build.make libavogadro/src/engines/CMakeFiles/qtaimengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/qtaimengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/qtaimengine.dir/build.make libavogadro/src/engines/CMakeFiles/qtaimengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/qtaimengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 28%] Built target qtaimengine make -f libavogadro/src/engines/CMakeFiles/ribbonengine.dir/build.make libavogadro/src/engines/CMakeFiles/ribbonengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/ribbonengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/ribbonengine.dir/build.make libavogadro/src/engines/CMakeFiles/ribbonengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/ribbonengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 83 [ 29%] Built target ribbonengine make -f libavogadro/src/engines/CMakeFiles/ringengine.dir/build.make libavogadro/src/engines/CMakeFiles/ringengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/ringengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/ringengine.dir/build.make libavogadro/src/engines/CMakeFiles/ringengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/ringengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Built target ringengine make -f libavogadro/src/engines/CMakeFiles/simplewireengine.dir/build.make libavogadro/src/engines/CMakeFiles/simplewireengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/simplewireengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/simplewireengine.dir/build.make libavogadro/src/engines/CMakeFiles/simplewireengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/simplewireengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 29%] Built target simplewireengine make -f libavogadro/src/engines/CMakeFiles/sphereengine.dir/build.make libavogadro/src/engines/CMakeFiles/sphereengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/sphereengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/sphereengine.dir/build.make libavogadro/src/engines/CMakeFiles/sphereengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/sphereengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 92 [ 30%] Built target sphereengine make -f libavogadro/src/engines/CMakeFiles/stickengine.dir/build.make libavogadro/src/engines/CMakeFiles/stickengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/stickengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/stickengine.dir/build.make libavogadro/src/engines/CMakeFiles/stickengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/stickengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 30%] Built target stickengine make -f libavogadro/src/engines/CMakeFiles/surfaceengine.dir/build.make libavogadro/src/engines/CMakeFiles/surfaceengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/surfaceengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/surfaceengine.dir/build.make libavogadro/src/engines/CMakeFiles/surfaceengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/surfaceengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 94 [ 31%] Built target surfaceengine make -f libavogadro/src/engines/CMakeFiles/wireengine.dir/build.make libavogadro/src/engines/CMakeFiles/wireengine.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/engines/CMakeFiles/wireengine.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/engines/CMakeFiles/wireengine.dir/build.make libavogadro/src/engines/CMakeFiles/wireengine.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/engines/CMakeFiles/wireengine.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 100 [ 32%] Built target wireengine make -f libavogadro/src/tools/CMakeFiles/aligntool.dir/build.make libavogadro/src/tools/CMakeFiles/aligntool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/aligntool.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/aligntool.dir/build.make libavogadro/src/tools/CMakeFiles/aligntool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/tools/CMakeFiles/aligntool.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 32%] Built target aligntool make -f libavogadro/src/tools/CMakeFiles/autoopttool.dir/build.make libavogadro/src/tools/CMakeFiles/autoopttool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/autoopttool.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/autoopttool.dir/build.make libavogadro/src/tools/CMakeFiles/autoopttool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/tools/CMakeFiles/autoopttool.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 5 [ 33%] Built target autoopttool make -f libavogadro/src/tools/CMakeFiles/autorotatetool.dir/build.make libavogadro/src/tools/CMakeFiles/autorotatetool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/autorotatetool.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/autorotatetool.dir/build.make libavogadro/src/tools/CMakeFiles/autorotatetool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/tools/CMakeFiles/autorotatetool.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Built target autorotatetool make -f libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/build.make libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/build.make libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Built target bondcentrictool make -f libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/build.make libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/build.make libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 33%] Built target clickmeasuretool make -f libavogadro/src/tools/CMakeFiles/drawtool.dir/build.make libavogadro/src/tools/CMakeFiles/drawtool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/drawtool.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/drawtool.dir/build.make libavogadro/src/tools/CMakeFiles/drawtool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/tools/CMakeFiles/drawtool.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 51 [ 34%] Built target drawtool make -f libavogadro/src/tools/CMakeFiles/manipulatetool.dir/build.make libavogadro/src/tools/CMakeFiles/manipulatetool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/manipulatetool.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/manipulatetool.dir/build.make libavogadro/src/tools/CMakeFiles/manipulatetool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/tools/CMakeFiles/manipulatetool.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 68 [ 35%] Built target manipulatetool make -f libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/build.make libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/build.make libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 84 [ 36%] Built target selectrotatetool make -f libavogadro/src/extensions/CMakeFiles/animationextension.dir/build.make libavogadro/src/extensions/CMakeFiles/animationextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/animationextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/animationextension.dir/build.make libavogadro/src/extensions/CMakeFiles/animationextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/animationextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 3 4 [ 38%] Built target animationextension make -f libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/build.make libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/build.make libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 43 [ 39%] Built target cartesianextension make -f libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/build.make libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/build.make libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 39%] Built target fileimportextension make -f libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/build.make libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/build.make libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 54 55 [ 41%] Built target forcefieldextension make -f libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/build.make libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/build.make libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 58 [ 42%] Built target gl2psextension make -f libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/build.make libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/build.make libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 42%] Built target h2methylextension make -f libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/build.make libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/build.make libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 59 [ 43%] Built target hydrogensextension make -f libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/build.make libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/build.make libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 65 [ 44%] Built target insertfragmentextension make -f libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/build.make libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/build.make libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 66 [ 45%] Built target insertpeptideextension make -f libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/build.make libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/build.make libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Built target invertchiralextension make -f libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/build.make libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/build.make libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Built target molecularpropextension make -f libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/build.make libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/build.make libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 45%] Built target networkfetchextension make -f libavogadro/src/extensions/CMakeFiles/povrayextension.dir/build.make libavogadro/src/extensions/CMakeFiles/povrayextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/povrayextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/povrayextension.dir/build.make libavogadro/src/extensions/CMakeFiles/povrayextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/povrayextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 74 [ 46%] Built target povrayextension make -f libavogadro/src/extensions/CMakeFiles/propextension.dir/build.make libavogadro/src/extensions/CMakeFiles/propextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/propextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/propextension.dir/build.make libavogadro/src/extensions/CMakeFiles/propextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/propextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 75 [ 47%] Built target propextension make -f libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/build.make libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/build.make libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 80 [ 48%] Built target pythonterminal make -f libavogadro/src/extensions/CMakeFiles/selectextension.dir/build.make libavogadro/src/extensions/CMakeFiles/selectextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/selectextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/selectextension.dir/build.make libavogadro/src/extensions/CMakeFiles/selectextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/selectextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 48%] Built target selectextension make -f libavogadro/src/extensions/CMakeFiles/shaderextension.dir/build.make libavogadro/src/extensions/CMakeFiles/shaderextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/shaderextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/shaderextension.dir/build.make libavogadro/src/extensions/CMakeFiles/shaderextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/shaderextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 85 [ 49%] Built target shaderextension make -f libavogadro/src/extensions/CMakeFiles/supercellextension.dir/build.make libavogadro/src/extensions/CMakeFiles/supercellextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/CMakeFiles/supercellextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/CMakeFiles/supercellextension.dir/build.make libavogadro/src/extensions/CMakeFiles/supercellextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/CMakeFiles/supercellextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 93 [ 50%] Built target supercellextension make -f libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/build.make libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography/spglib /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/build.make libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 91 [ 51%] Built target spglib make -f libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/build.make libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/crystallography /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/build.make libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 45 46 47 48 49 [ 56%] Built target crystallographyextension make -f libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/build.make libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/build.make libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 86 87 88 89 90 [ 61%] Built target spectraextension make -f libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/build.make libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/spectra /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/build.make libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 99 [ 62%] Built target vibrationextension make -f libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/build.make libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces/openqube /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/build.make libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 1 2 [ 64%] Built target OpenQube make -f libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/build.make libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/build.make libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 70 71 72 [ 67%] Built target orbitalextension make -f libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/build.make libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/surfaces /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/build.make libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 95 [ 68%] Built target surfaceextension make -f libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/build.make libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder/tubegen /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/build.make libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 98 [ 69%] Built target tubegen make -f libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/build.make libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/swcntbuilder /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/build.make libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 96 97 [ 71%] Built target swcntbuilderextension make -f libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/build.make libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/qtaim /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/build.make libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 81 82 [ 73%] Built target qtaimextension make -f libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/build.make libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/build.make libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 56 57 [ 75%] Built target gamessextension make -f libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/build.make libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/extensions/quantuminput /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/build.make libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 60 61 62 63 64 [ 80%] Built target inputfileextension make -f libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/build.make libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/build.make libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 80%] Built target atomindexcolor make -f libavogadro/src/colors/CMakeFiles/chargecolor.dir/build.make libavogadro/src/colors/CMakeFiles/chargecolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/chargecolor.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/chargecolor.dir/build.make libavogadro/src/colors/CMakeFiles/chargecolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/colors/CMakeFiles/chargecolor.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 44 [ 81%] Built target chargecolor make -f libavogadro/src/colors/CMakeFiles/customcolor.dir/build.make libavogadro/src/colors/CMakeFiles/customcolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/customcolor.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/customcolor.dir/build.make libavogadro/src/colors/CMakeFiles/customcolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/colors/CMakeFiles/customcolor.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 50 [ 82%] Built target customcolor make -f libavogadro/src/colors/CMakeFiles/distancecolor.dir/build.make libavogadro/src/colors/CMakeFiles/distancecolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/distancecolor.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/distancecolor.dir/build.make libavogadro/src/colors/CMakeFiles/distancecolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/colors/CMakeFiles/distancecolor.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Built target distancecolor make -f libavogadro/src/colors/CMakeFiles/residuecolor.dir/build.make libavogadro/src/colors/CMakeFiles/residuecolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/residuecolor.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/residuecolor.dir/build.make libavogadro/src/colors/CMakeFiles/residuecolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/colors/CMakeFiles/residuecolor.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Built target residuecolor make -f libavogadro/src/colors/CMakeFiles/smartscolor.dir/build.make libavogadro/src/colors/CMakeFiles/smartscolor.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/colors/CMakeFiles/smartscolor.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/colors/CMakeFiles/smartscolor.dir/build.make libavogadro/src/colors/CMakeFiles/smartscolor.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/colors/CMakeFiles/smartscolor.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles [ 82%] Built target smartscolor make -f libavogadro/src/python/CMakeFiles/python-module.dir/build.make libavogadro/src/python/CMakeFiles/python-module.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/libavogadro/src/python /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/libavogadro/src/python/CMakeFiles/python-module.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f libavogadro/src/python/CMakeFiles/python-module.dir/build.make libavogadro/src/python/CMakeFiles/python-module.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `libavogadro/src/python/CMakeFiles/python-module.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 76 77 78 79 [ 86%] Built target python-module make -f avogadro/src/CMakeFiles/avogadro-app.dir/build.make avogadro/src/CMakeFiles/avogadro-app.dir/depend make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' cd /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/avogadro-1.1.0 /build/buildd/avogadro-1.1.0/avogadro/src /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/avogadro/src/CMakeFiles/avogadro-app.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make -f avogadro/src/CMakeFiles/avogadro-app.dir/build.make avogadro/src/CMakeFiles/avogadro-app.dir/build make[3]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[3]: Nothing to be done for `avogadro/src/CMakeFiles/avogadro-app.dir/build'. make[3]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_report /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 27 28 29 30 31 32 33 34 35 36 37 38 39 40 [100%] Built target avogadro-app make[2]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/buildd/avogadro-1.1.0/obj-i686-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' make[2]: Nothing to be done for `preinstall'. make[2]: Leaving directory `/build/buildd/avogadro-1.1.0/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/AvogadroConfig.cmake -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/AvogadroConfigVersion.cmake -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/AvogadroUse.cmake -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/cmake/FindEigen2.cmake -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/cmake/FindGLEW.cmake -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alcohols -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alcohols/2-aminoethanol.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alcohols/ethanol.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alcohols/ethane-1_2-diol.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alcohols/propan-2-ol.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alcohols/propane-1_2_3-triol.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alcohols/methanol.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alcohols/cyclopentanol.cml -- Installing: 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/build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fullerenes/C78.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fullerenes/C180.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fullerenes/C26.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fullerenes/C20.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fullerenes/C24.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fullerenes/C28.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fullerenes/C60-buckminsterfullerene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fullerenes/C36.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fullerenes/PC70BM.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fullerenes/PCBM.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fullerenes/C30.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cyclodecane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cyclohexane-twist-boat.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cyclohexane-chair.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/1R-camphene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cyclohexane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/trans-decahydronaphthalene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/adamantane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cyclobutane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cyclopropane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/abietic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cycloheptane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cis-decahydronaphthalene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cyclononane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cubane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/1R-camphor.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cyclopentane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/cyclooctane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkanes/norbornane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/tert-butylamine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/piperazine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/methylamine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/dimethylamine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/ammonia.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/ethylamine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/triethylamine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/diethylamine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/trimethylamine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/2-aminopropane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/1H-azepine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/piperidine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/S-sec-butylamine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/pyrrolidine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/triethylenediamine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amines/azepane.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-L-lyxopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-arabinopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-idopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-tagatopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-L-fucopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-L-ribopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-ribopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-L-ribopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-galactopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-xylopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-arabinopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-ribopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-L-sorbopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-idopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-L-arabinopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-galactopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-lyxopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-galacturonopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-L-arabinopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-psicopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-talopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-gulopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-glucopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-fructopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-gulopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-mannopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-allopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-talopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-rhamnopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-allopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-rhamnopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-fucopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-tagatopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-L-xylopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-xylopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-mannopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-L-rhamnopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-L-galactopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-glucopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-L-lyxopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-L-xylopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-lyxopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/alpha-D-glucuronopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_sugars/beta-D-fucopyranose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/L-tartaric_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/D-lactic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/acetic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/butanoic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/isobutyric_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/L-ascorbic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/D-malic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/propanoic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/D-tartaric_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/L-malic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/L-lactic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/formic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/E-butenedioic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/2_2_2-trichloroacetic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/2_2-dichloroacetic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/2_2_2-trifluoroacetic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/oxalic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/citric_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carboxylic_acids/E-butanoic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/sulfoxides -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/sulfoxides/dimethyl_sulfoxide.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nitriles -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nitriles/acetonitrile.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nitriles/isobutyronitrile.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nitriles/propionitrile.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nitriles/butyronitrile.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nitriles/1_1_1-trichloroacetonitrile.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbamides -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbamides/urea.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/water.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amides -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amides/acetamide.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amides/ethyl_carbamate.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amides/N_N-dimethylformamide.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amides/N_N-dimethylacetamide.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amides/oxamide.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/linolenic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/hexanoic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/decanoic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/cervonic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/linoleic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/arachidonic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/oleic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/lauric_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/pentanoic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/palmitic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/stearic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/myristic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/fatty_acids/octanoic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/1H-pyrrole.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/benzofuran.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/thiophene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/pyridine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/1_2-thiazole.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/1_2-oxazole.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/benzothiophene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/furan.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/1H-indole.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/nicotinic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/1_3-thiazole.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/picolinic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/nicotinamide.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/1H-pyrazole.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/isonicotinic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/isonicotinamide.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/1_3-oxazole.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/heteroaromatics/picolinamide.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-ribose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/dihydroxyacetone.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-xylulose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-erythrulose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-glucose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-glyceraldehyde.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-ribulose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-psicose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-gulose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-mannose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-altrose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-threose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-erythrose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-fructose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-galactose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-talose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-tagatose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-sorbose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-idose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-xylose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-lyxose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-arabinose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/carbohydrates/d-allose.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/hex-1-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/E-hept-2-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/3E-penta-1_3-diene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/but-1-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/E-oct-3-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/2-methylbuta-1_3-diene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/Z-hex-2-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/oct-1-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/3Z_3-ethylhepta-1_3-diene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/Z-but-2-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/3Z-penta-1_3-diene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/E-hept-3-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/Z-pent-2-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/Z-hex-3-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/propene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/hept-1-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/Z-hept-2-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/Z-oct-2-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/E-hex-2-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/Z-hept-3-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/ethene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/Z-oct-4-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/E-pent-2-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/2-methylbut-2-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/E-hex-3-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/pent-1-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/E-oct-2-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/E-but-2-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/E-oct-4-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkenes/Z-oct-3-ene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/macrocycles -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/macrocycles/phthalocyanine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/macrocycles/porphin.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/steroids -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/steroids/cholesterol.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/steroids/estradiol.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/steroids/testosterone.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkynes -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkynes/acetylene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/alkynes/propyne.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/aldehydes -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/aldehydes/formaldehyde.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/aldehydes/acetaldehyde.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-cysteine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-aspartic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-4-nitrophenylalanine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-tryptophan.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-tyrosine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-leucine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-tyrosine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-phenylalanine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-cysteine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-allo-isoleucine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-phenylalanine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-alanine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-serine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-threonine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-isoleucine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-isoleucine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-proline.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-proline.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-methionine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-valine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/glycine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-lysine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-allo-threonine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-leucine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-arginine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-threonine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-asparagine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-alanine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-tryptophan.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-methionine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-glutamine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-serine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-aspartic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-histidine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-glutamine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-asparagine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-valine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-glutamic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-glutamic_acid.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-lysine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/D-histidine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/amino_acids/L-arginine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/cyclohexene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/Z-cycloheptene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/cyclopenta-1_3-diene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/cyclohexa-1_4-diene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/Z-cyclooctene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/cyclopentene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/cyclohepta-1_4-diene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/cycloocta-1_3_5_7-tetraene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/cyclohepta-1_3-diene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/cyclohepta-1_3_5-triene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/cycloocta-1_3_5-triene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/cycloocta-1_3-diene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/cyclic_alkenes/cyclohexa-1_3-diene.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nucleobases -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nucleobases/guanine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nucleobases/uracil.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nucleobases/adenine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nucleobases/thymine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/nucleobases/cytosine.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/ligands -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/fragments/ligands/Cp-cyclopentadienyl.cml -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/l-lys.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-tyr.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-asp.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/l-cys.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/l-leu.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-ile.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/l-sec.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-ser.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-val.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-phe.zmat -- 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Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-trp.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-leu.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/l-ala.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-his.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-cys.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/gly.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-glu.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-met.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-pro.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/l-asp.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/builder/amino/d-lys.zmat -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/titanates -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/titanates/SrTiO3-Tausonite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/titanates/Mg2TiO4-Qandilite-tetrag.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/titanates/MgTiO3.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/titanates/BaTiO3.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/titanates/CaTiO3-Perovskite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/titanates/Mg2TiO4-Qandilite-cubic.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/CrCl2.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/HgCl-Calomel.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/FeCl3-Molysite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/CaF2-Fluorite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/AgBr-Bromargyrite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/CsCl.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/AlNa3F6-Cryolite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/KCl-Sylvite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/KBr.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/CdI2.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/AlCl3.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/CrCl3.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/AgCl-Chlorargyrite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/CdCl2.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/NaCl-Halite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/halides/PbFCl-Matlockite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/telurides -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/telurides/ZnTe.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/telurides/CdTe.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/telurides/Bi2Te3.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/telurides/BiTe.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/telurides/PbTe-Altaite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/hydroxides -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/hydroxides/LiOH.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/hydroxides/Mg(OH)2-Brucite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/hydroxides/KOH.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/hydroxides/Ca(OH)2-Portlandite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/hydroxides/Ni(OH)2-Theophrastite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/ice -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/ice/H2O-Ice-Ih.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/ice/H2O-Ice-VII.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/ice/H2O-Ice-IV.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/ice/H2O-Ice-II.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/ice/H2O-Ice-III.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/ice/H2O-Ice.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/ice/H2O-Ice-VI.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Mg2Al2SiO9H4-Amesite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Lepidolite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Al2Si2O9H4-Kaolinite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Mg4Si6O22.82H13.64-Sepiolite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Mg3(O12Si4)H2-Vermiculite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Al2Si2O9H4-Dickite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Mn1.854Fe1.656Mg0.537Si0.953O9H4-Guidottiite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Al2Si2O9H4-Nacrite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Al4KSi2O12-Illite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Al2Si4O12Ca0.5-Montmorillonite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Zn2SiO5H2-Hemimorphite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/Fe2.25Cl0.5H2.75-Fougerite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/AlSi2O6H-Pyrophyllite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/clays/FeSi2O6H-Nontronite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/carbides -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/carbides/SiC-2H-Moissanite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/carbides/SiC-6H-alpha.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/carbides/WC.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/carbides/SiC-Moissanite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/carbides/SiC-3C-beta.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/carbides/W2C.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/carbides/SiC.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/phosphides -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/phosphides/InP.cif -- Installing: 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/build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/FeS.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/PbS-Galena.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/SnS-Herzenbergite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/ZnS-Sphalerite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/CdS-Hawleyite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/Sb2S3-Stibnite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/ZnS-Zincblende.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/FeS2-Pyrite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/HgS-Metacinnabar.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/CdS-Greenockite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/ZnS-Wurtzite-2H.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/sulfides/Bi2S3-Bismuthinite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/hydrides -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/hydrides/NaH.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/hydrides/LiH.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/hydrides/KH.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/hydrides/PdH.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/selenides -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/selenides/PbSe-Clausthalite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/selenides/BiSe.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/selenides/CdSe-Cadmoselite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/selenides/ZnSe.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/selenides/Sb2Se3-Antimonselite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/selenides/HgSe-Tiemannite.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/selenides/Bi2Se3.cif -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/crystals/elements -- Installing: 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/build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_nb.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_pt.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_en_GB.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_sv.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_ca.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_ca@valencia.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_ug.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_nl.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_hi.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_da.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_ar.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_sr.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_gl.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_ja.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_bg.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_tr.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_pl.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_ru.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_zh_CN.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_sk.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_cs.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_fr.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_zh_TW.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_kn.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_uk.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/avogadro/i18n/libavogadro_pt_BR.qm -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/AvogadroTargets.cmake -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/AvogadroTargets-relwithdebinfo.cmake -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/labelengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/labelengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/wireengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/wireengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/hbondengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/hbondengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/forceengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/forceengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/sphereengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/sphereengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/stickengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/stickengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/ribbonengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/ribbonengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/cartoonengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/cartoonengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/ringengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/ringengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/polygonengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/polygonengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/surfaceengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/surfaceengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/axesengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/axesengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/dipoleengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/dipoleengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/simplewireengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/simplewireengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/qtaimengine.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/engines/qtaimengine.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/engineScripts/wireframe.py -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/drawtool.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/drawtool.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/bondcentrictool.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/bondcentrictool.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/clickmeasuretool.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/clickmeasuretool.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/selectrotatetool.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/selectrotatetool.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/autoopttool.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/autoopttool.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/manipulatetool.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/manipulatetool.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/autorotatetool.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/autorotatetool.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/aligntool.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/tools/aligntool.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/propextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/propextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/cartesianextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/cartesianextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/molecularpropextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/molecularpropextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/forcefieldextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/forcefieldextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/hydrogensextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/hydrogensextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/invertchiralextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/invertchiralextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/selectextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/selectextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/insertfragmentextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/insertfragmentextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/insertpeptideextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/insertpeptideextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/h2methylextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/h2methylextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/pythonterminal.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/pythonterminal.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/extensionScripts/example.py -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/animationextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/animationextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/povrayextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/povrayextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/fileimportextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/fileimportextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/shaderextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/shaderextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/clip.vert -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/x-ray.vert -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/plasma.vert -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/marble.vert -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/phong-use-diffuse.vert -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/light.vert -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/phong.vert -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/x-ray-cryos.vert -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/per-pixel-lighting.vert -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/per_pixel2.vert -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/gooch.vert -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/per_pixel2.frag -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/x-ray-cryos.frag -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/plasma.frag -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/per-pixel-lighting.frag -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/marble.frag -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/clip.frag -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/light.frag -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/x-ray.frag -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/phong-use-diffuse.frag -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/phong.frag -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/gooch.frag -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/x-ray.params -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/x-ray-cryos.params -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/share/libavogadro/shaders/phong.params -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/supercellextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/supercellextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/networkfetchextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/networkfetchextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/gl2psextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/gl2psextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/crystallographyextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/crystallographyextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/vibrationextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/vibrationextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/spectraextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/spectraextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/surfaceextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/surfaceextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/orbitalextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/orbitalextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/libavogadro_OpenQube.so.0.1.0 -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/libavogadro_OpenQube.so.0 -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/libavogadro_OpenQube.so -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/swcntbuilderextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/swcntbuilderextension.so" -- Installing: /build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/qtaimextension.so -- Removed runtime path from "/build/buildd/avogadro-1.1.0/debian/tmp/usr/lib/avogadro/1_1/extensions/qtaimextension.so" -- Installing: 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dh_installdocs -O--parallel dh_installchangelogs -O--parallel dh_installexamples -O--parallel dh_installman -O--parallel debian/rules override_dh_python2 make[1]: Entering directory `/build/buildd/avogadro-1.1.0' dh_python2 -ppython-avogadro W: dh_python2:436: public extension linked with libpython2.7: Avogadro.so dh_numpy -ppython-avogadro dh_sip make[1]: Leaving directory `/build/buildd/avogadro-1.1.0' dh_installmenu -O--parallel dh_perl -O--parallel dh_link -O--parallel dh_compress -O--parallel dh_fixperms -O--parallel debian/rules override_dh_strip make[1]: Entering directory `/build/buildd/avogadro-1.1.0' dh_strip --dbg-package=avogadro-dbg dh_strip debug symbol extraction: disabling for PPA build dh_strip debug symbol extraction: not doing anything since NO_PKG_MANGLE is given make[1]: Leaving directory `/build/buildd/avogadro-1.1.0' dh_makeshlibs -O--parallel dh_shlibdeps -O--parallel dh_installdeb -O--parallel dh_gencontrol -O--parallel dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package avogadro: unused substitution variable ${sip:Depends} dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package avogadro-data: unused substitution variable ${sip:Depends} dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package libavogadro1: unused substitution variable ${sip:Depends} dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package libavogadro-dev: unused substitution variable ${sip:Depends} dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package avogadro-dbg: unused substitution variable ${sip:Depends} dh_md5sums -O--parallel dh_builddeb -O--parallel INFO: pkgstriptranslations version 118 INFO: Disabling pkgstriptranslations for PPA build INFO: Disabling pkgmaintainermangler for PPA build INFO: Disabling pkgstripfiles for PPA build dpkg-deb: building package `avogadro' in `../avogadro_1.1.0-4ubuntu1~ppa1_i386.deb'. INFO: pkgstriptranslations version 118 INFO: Disabling pkgstriptranslations for PPA build INFO: Disabling pkgmaintainermangler for PPA build INFO: Disabling pkgstripfiles for PPA build dpkg-deb: building package `avogadro-data' in `../avogadro-data_1.1.0-4ubuntu1~ppa1_all.deb'. INFO: pkgstriptranslations version 118 INFO: Disabling pkgstriptranslations for PPA build INFO: Disabling pkgmaintainermangler for PPA build INFO: Disabling pkgstripfiles for PPA build dpkg-deb: building package `libavogadro1' in `../libavogadro1_1.1.0-4ubuntu1~ppa1_i386.deb'. INFO: pkgstriptranslations version 118 INFO: Disabling pkgstriptranslations for PPA build INFO: Disabling pkgmaintainermangler for PPA build INFO: Disabling pkgstripfiles for PPA build dpkg-deb: building package `libavogadro-dev' in `../libavogadro-dev_1.1.0-4ubuntu1~ppa1_i386.deb'. INFO: pkgstriptranslations version 118 INFO: Disabling pkgstriptranslations for PPA build INFO: Disabling pkgmaintainermangler for PPA build INFO: Disabling pkgstripfiles for PPA build dpkg-deb: warning: 'debian/python-avogadro/DEBIAN/control' contains user-defined field 'Python-Version' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `python-avogadro' in `../python-avogadro_1.1.0-4ubuntu1~ppa1_i386.deb'. INFO: pkgstriptranslations version 118 INFO: Disabling pkgstriptranslations for PPA build INFO: Disabling pkgmaintainermangler for PPA build INFO: Disabling pkgstripfiles for PPA build dpkg-deb: building package `avogadro-dbg' in `../avogadro-dbg_1.1.0-4ubuntu1~ppa1_i386.deb'. dpkg-genchanges -b -mUbuntu Build Daemon >../avogadro_1.1.0-4ubuntu1~ppa1_i386.changes dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build avogadro-1.1.0 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20131126-1915 chroot-autobuild/build/buildd/avogadro_1.1.0-4ubuntu1~ppa1_i386.deb: new debian package, version 2.0. size 7847036 bytes: control archive= 5647 bytes. 1370 bytes, 27 lines control 12855 bytes, 166 lines md5sums 185 bytes, 7 lines * postinst #!/bin/sh 160 bytes, 5 lines * postrm #!/bin/sh Package: avogadro Version: 1.1.0-4ubuntu1~ppa1 Architecture: i386 Maintainer: Debichem Team Installed-Size: 12670 Depends: libavogadro1 (= 1.1.0-4ubuntu1~ppa1), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libopenbabel4, libqt4-opengl (>= 4:4.5.3), libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.6.1), libstdc++6 (>= 4.2.1), libx11-6 Recommends: avogadro-data (>= 1.0.0-2) Section: science Priority: optional Homepage: http://avogadro.sourceforge.net/ Description: Molecular Graphics and Modelling System Avogadro is a molecular graphics and modelling system targeted at molecules and biomolecules. It can visualize properties like molecular orbitals or electrostatic potentials and features an intuitive molecular builder. . Features include: * Molecular modeller with automatic force-field based geometry optimization * Molecular Mechanics including constraints and conformer searches * Visualization of molecular orbitals and general isosurfaces * Visualization of vibrations and plotting of vibrational spectra * Support for crystallographic unit cells * Input generation for the Gaussian, GAMESS and MOLPRO quantum chemistry packages * Flexible plugin architecture and Python scripting . File formats Avogadro can read include PDB, XYZ, CML, CIF, Molden, as well as Gaussian, GAMESS and MOLPRO output. chroot-autobuild/build/buildd/avogadro-data_1.1.0-4ubuntu1~ppa1_all.deb: new debian package, version 2.0. size 284636 bytes: control archive= 27268 bytes. 749 bytes, 18 lines control 83162 bytes, 957 lines md5sums Package: avogadro-data Source: avogadro Version: 1.1.0-4ubuntu1~ppa1 Architecture: all Maintainer: Debichem Team Installed-Size: 3006 Breaks: avogadro (<< 1.0.0-2), libavogadro0 (<< 1.0.0-2) Replaces: avogadro (<< 1.0.0-2), libavogadro0 (<< 1.0.0-2) Section: science Priority: optional Homepage: http://avogadro.sourceforge.net/ Description: Molecular Graphics and Modelling System (Data Files) Avogadro is a molecular graphics and modelling system targeted at molecules and biomolecules. It can visualize properties like molecular orbitals or electrostatic potentials and features an intuitive molecular builder. . This package contains data files like molecular builder fragments or OpenGL shaders. chroot-autobuild/build/buildd/libavogadro1_1.1.0-4ubuntu1~ppa1_i386.deb: new debian package, version 2.0. size 1470244 bytes: control archive= 2791 bytes. 1024 bytes, 19 lines control 4929 bytes, 60 lines md5sums 135 bytes, 7 lines * postinst #!/bin/sh 132 bytes, 7 lines * postrm #!/bin/sh 63 bytes, 2 lines shlibs Package: libavogadro1 Source: avogadro Version: 1.1.0-4ubuntu1~ppa1 Architecture: i386 Maintainer: Debichem Team Installed-Size: 6214 Depends: libboost-python1.54.0, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libgl2ps0, libglew1.8 (>= 1.8.0), libglu1-mesa | libglu1, libopenbabel4, libpython2.7 (>= 2.7), libqt4-network (>= 4:4.5.3), libqt4-opengl (>= 4:4.5.3), libqtcore4 (>= 4:4.8.0), libqtgui4 (>= 4:4.8.0), libstdc++6 (>= 4.6), zlib1g (>= 1:1.1.4) Recommends: avogadro-data (>= 1.0.0-2), python-avogadro Conflicts: libavogadro0 Replaces: libavogadro0 Section: libs Priority: optional Homepage: http://avogadro.sourceforge.net/ Description: Molecular Graphics and Modelling System (library) Avogadro is a molecular graphics and modelling system targeted at small to medium molecules. It can visualize properties like molecular orbitals or electrostatic potentials and features an intuitive molecular builder. . This package provides the shared library. chroot-autobuild/build/buildd/libavogadro-dev_1.1.0-4ubuntu1~ppa1_i386.deb: new debian package, version 2.0. size 68996 bytes: control archive= 2323 bytes. 789 bytes, 16 lines control 3921 bytes, 57 lines md5sums Package: libavogadro-dev Source: avogadro Version: 1.1.0-4ubuntu1~ppa1 Architecture: i386 Maintainer: Debichem Team Installed-Size: 405 Depends: libavogadro1 (= 1.1.0-4ubuntu1~ppa1), libeigen2-dev (>= 2.0~beta6), libglew-dev, libopenbabel-dev (>= 2.2.0), libqt4-dev (>= 4.4.0), libboost-python-dev, libpython2.7-dev Section: libdevel Priority: extra Homepage: http://avogadro.sourceforge.net/ Description: Molecular Graphics and Modelling System (development files) Avogadro is a molecular graphics and modelling system targeted at small to medium molecules. It can visualize properties like molecular orbitals or electrostatic potentials and features an intuitive molecular builder. . This package provides the development and header files. chroot-autobuild/build/buildd/python-avogadro_1.1.0-4ubuntu1~ppa1_i386.deb: new debian package, version 2.0. size 219606 bytes: control archive= 906 bytes. 1037 bytes, 20 lines control 319 bytes, 4 lines md5sums Package: python-avogadro Source: avogadro Version: 1.1.0-4ubuntu1~ppa1 Architecture: i386 Maintainer: Debichem Team Installed-Size: 1187 Depends: python-numpy (>= 1:1.7-0~b1), python-qt4, python-sip, python (<< 2.8), python (>= 2.7), python-numpy-abi9, libavogadro1, libboost-python1.54.0, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libpython2.7 (>= 2.7), libqt4-opengl (>= 4:4.5.3), libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.5.3), libstdc++6 (>= 4.4.0), sip-api-10.1 Breaks: libavogadro0 (<< 0.9.8) Replaces: libavogadro0 (<< 0.9.8) Provides: python2.7-avogadro Section: python Priority: extra Homepage: http://avogadro.sourceforge.net/ Description: Molecular Graphics and Modelling System (Python module) Avogadro is a molecular graphics and modelling system targeted at small to medium molecules. It can visualize properties like molecular orbitals or electrostatic potentials and features an intuitive molecular builder. . This package provides the Python module. Python-Version: 2.7 chroot-autobuild/build/buildd/avogadro-dbg_1.1.0-4ubuntu1~ppa1_i386.deb: new debian package, version 2.0. size 28924716 bytes: control archive= 2483 bytes. 721 bytes, 17 lines control 5898 bytes, 62 lines md5sums Package: avogadro-dbg Source: avogadro Version: 1.1.0-4ubuntu1~ppa1 Architecture: i386 Maintainer: Debichem Team Installed-Size: 147147 Depends: avogadro (= 1.1.0-4ubuntu1~ppa1), libavogadro1 (= 1.1.0-4ubuntu1~ppa1) Section: debug Priority: extra Homepage: http://avogadro.sourceforge.net/ Description: Molecular Graphics and Modelling System (debugging symbols) Avogadro is a molecular graphics and modelling system targeted at small to medium molecules. It can visualize properties like molecular orbitals or electrostatic potentials and features an intuitive molecular builder. . This package provides the debugging symbols for the library, the application and modules. chroot-autobuild/build/buildd/avogadro_1.1.0-4ubuntu1~ppa1_i386.deb: dpkg-deb: file `chroot-autobuild/build/buildd/avogadro_1.1.0-4ubuntu1~ppa1_i386.deb' contains ununderstood data member data.tar.xz , giving up chroot-autobuild/build/buildd/avogadro-data_1.1.0-4ubuntu1~ppa1_all.deb: dpkg-deb: file `chroot-autobuild/build/buildd/avogadro-data_1.1.0-4ubuntu1~ppa1_all.deb' contains ununderstood data member data.tar.xz , giving up chroot-autobuild/build/buildd/libavogadro1_1.1.0-4ubuntu1~ppa1_i386.deb: dpkg-deb: file `chroot-autobuild/build/buildd/libavogadro1_1.1.0-4ubuntu1~ppa1_i386.deb' contains ununderstood data member data.tar.xz , giving up chroot-autobuild/build/buildd/libavogadro-dev_1.1.0-4ubuntu1~ppa1_i386.deb: dpkg-deb: file `chroot-autobuild/build/buildd/libavogadro-dev_1.1.0-4ubuntu1~ppa1_i386.deb' contains ununderstood data member data.tar.xz , giving up chroot-autobuild/build/buildd/python-avogadro_1.1.0-4ubuntu1~ppa1_i386.deb: dpkg-deb: file `chroot-autobuild/build/buildd/python-avogadro_1.1.0-4ubuntu1~ppa1_i386.deb' contains ununderstood data member data.tar.xz , giving up chroot-autobuild/build/buildd/avogadro-dbg_1.1.0-4ubuntu1~ppa1_i386.deb: dpkg-deb: file `chroot-autobuild/build/buildd/avogadro-dbg_1.1.0-4ubuntu1~ppa1_i386.deb' contains ununderstood data member data.tar.xz , giving up avogadro_1.1.0-4ubuntu1~ppa1_i386.changes: Format: 1.8 Date: Tue, 26 Nov 2013 19:48:49 +0100 Source: avogadro Binary: avogadro avogadro-data libavogadro1 libavogadro-dev python-avogadro avogadro-dbg Architecture: i386 all Version: 1.1.0-4ubuntu1~ppa1 Distribution: trusty Urgency: low Maintainer: Ubuntu Build Daemon Changed-By: Rohan Garg Description: avogadro - Molecular Graphics and Modelling System avogadro-data - Molecular Graphics and Modelling System (Data Files) avogadro-dbg - Molecular Graphics and Modelling System (debugging symbols) libavogadro-dev - Molecular Graphics and Modelling System (development files) libavogadro1 - Molecular Graphics and Modelling System (library) python-avogadro - Molecular Graphics and Modelling System (Python module) Changes: avogadro (1.1.0-4ubuntu1~ppa1) trusty; urgency=low . * Merge with debian experimental, reamining changes - Make sure libavogadro-dev pulls in libpython2.7-dev and libboost-python-dev Checksums-Sha1: 63a3f0b68f9ea929695d00138f2e0ceb1ee02b84 7847036 avogadro_1.1.0-4ubuntu1~ppa1_i386.deb 207cfc2ce3fe21d5a8692ec47b1b323a2154fa1c 284636 avogadro-data_1.1.0-4ubuntu1~ppa1_all.deb 77eaca4e1aea812192999c78d72adf824afcd2ca 1470244 libavogadro1_1.1.0-4ubuntu1~ppa1_i386.deb 76ecf37394b76deb31fc1c1f255b7d8ff2a0e0df 68996 libavogadro-dev_1.1.0-4ubuntu1~ppa1_i386.deb dc619d3ba2da9ca180853d71d94b34bf7f85013b 219606 python-avogadro_1.1.0-4ubuntu1~ppa1_i386.deb 1400bd411885ca999cc0fb18b540202b23e9f13d 28924716 avogadro-dbg_1.1.0-4ubuntu1~ppa1_i386.deb Checksums-Sha256: fa6f94ba861ff01aaa342229fd33f263a641195a3a8d2a592c333582c3d54181 7847036 avogadro_1.1.0-4ubuntu1~ppa1_i386.deb 4573e9e4b50c869af654c0ab7d2e695be0a639107effed28fa496d81e8a1ddc2 284636 avogadro-data_1.1.0-4ubuntu1~ppa1_all.deb 08544ef5efc1f854b682b8011ac84fd3878e29a1f155a0cc0545c27525c0b6e1 1470244 libavogadro1_1.1.0-4ubuntu1~ppa1_i386.deb 9e30ca24c57cf0e5f2731f219d87e190f81fcca92a52256b3bf5a986bc79b261 68996 libavogadro-dev_1.1.0-4ubuntu1~ppa1_i386.deb 81ed2e4c8c42272e3767bce2eb6a331675785c82e81627754becfe3c9dfc654b 219606 python-avogadro_1.1.0-4ubuntu1~ppa1_i386.deb f3ca97fb59afccb7d20075465bb71263b631c415f4e057c5f749a5bbc161c8d0 28924716 avogadro-dbg_1.1.0-4ubuntu1~ppa1_i386.deb Files: 3090db27cda2e3e02b7d00ac7f89346f 7847036 science optional avogadro_1.1.0-4ubuntu1~ppa1_i386.deb 4d9b253eae41e2ccc08a083dc59e9981 284636 science optional avogadro-data_1.1.0-4ubuntu1~ppa1_all.deb 4dbea9eaaf9d00e819df5b57a36b9859 1470244 libs optional libavogadro1_1.1.0-4ubuntu1~ppa1_i386.deb 874fb24d8c120f24633e4a1a9978ace8 68996 libdevel extra libavogadro-dev_1.1.0-4ubuntu1~ppa1_i386.deb 33e35d79a96f131286388f20fc30220c 219606 python extra python-avogadro_1.1.0-4ubuntu1~ppa1_i386.deb c845b5e840454b46095daca1c2ee2e45 28924716 debug extra avogadro-dbg_1.1.0-4ubuntu1~ppa1_i386.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20131126-1915 Build needed 00:22:45, 910944k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-5271710'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-5271710/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-5271710'] Unmounting chroot for build PACKAGEBUILD-5271710... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-5271710'] Removing build PACKAGEBUILD-5271710