msxpertsuite 5.8.6-2build1 source package in Ubuntu
Changelog
msxpertsuite (5.8.6-2build1) focal; urgency=medium * No-change rebuild for libgcc-s1 package name change. -- Matthias Klose <email address hidden> Tue, 24 Mar 2020 15:08:05 +0100
Upload details
- Uploaded by:
- Matthias Klose
- Uploaded to:
- Focal
- Original maintainer:
- Debichem Team
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Focal | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
msxpertsuite_5.8.6.orig.tar.gz | 88.3 MiB | a8a67110df16df457129bc18842512cfe03b72a4ca5d7caf12d08d050cfb11db |
msxpertsuite_5.8.6-2build1.debian.tar.xz | 277.5 KiB | 060925fd0902983d46f23575d53248a5ee6888624c380ef946171299f0c7232e |
msxpertsuite_5.8.6-2build1.dsc | 2.9 KiB | f071591875e760e1f39ecb621aeb436f2d776b63a4d13ee99d4d6e811d6e7f92 |
Available diffs
- diff from 5.8.6-2 (in Debian) to 5.8.6-2build1 (354 bytes)
Binary packages built by this source
- msxpertsuite: mass spectrometry software suite - metapackage
msXpertSuite provides programs to model linear (bio-) polymer
chemistries, simulate mass spectral data, analyse and data-mine mass.
It is the successor of GNU polyXmass, first, and then of massXpert.
.
The massXpert and mineXpert programs allow the following:
.
massXpert:
- making brand new polymer chemistry definitions;
- using the definitions to perform easy calculations in a desktop
calculator-like manner;
- performing sophisticated polymer sequence editing and simulations;
- perform m/z list comparisons;
.
Chemical simulations encompass cleavage (either chemical or
enzymatic), gas-phase fragmentations, chemical modification of any
monomer in the polymer sequence, cross-linking of monomers in the
sequence, arbitrary mass searches, calculation of the isotopic
pattern...
.
mineXpert:
- Open mass spectrometry data files (mzML, mzXML, asc, xy, ...);
- Calculate and display the TIC chromatogram;
- For mobility data, calculate and display a mz=f(dt) color map;
- Integrate the data from the TIC chromatogram or color map
- to mass spectrum;
- to drift spectrum;
- back to TIC chromatogram (XIC chromatogram);
- reverse operations;
- to single TIC intensity value
(for mass spectral intensity comparisons);
- Model centroids peaks into mass spectra using either the
Gaussian model or the Lorentzian model;
- Export the data to text files;
- Slice a big initial file into smaller chunks for easier mining;
- Define how mining activity is recorded on disk for later use;
- Convert mzML files into a private (albeit open) mass spectrometry
format that allows better performance (based on SQLite3).
.
This package depends on both massXpert and mineXpert packages and thus will
install both of them. To install only one of the packages, install the
corresponding msxpertsuite-massxpert or msxpertsuite- minexpert package.
- msxpertsuite-massxpert: No summary available for msxpertsuite-massxpert in ubuntu groovy.
No description available for msxpertsuite-
massxpert in ubuntu groovy.
- msxpertsuite-massxpert-data-doc: No summary available for msxpertsuite-massxpert-data-doc in ubuntu groovy.
No description available for msxpertsuite-
massxpert- data-doc in ubuntu groovy.
- msxpertsuite-massxpert-dbgsym: debug symbols for msxpertsuite-massxpert
- msxpertsuite-minexpert: mass spectrometry software suite - mineXpert
msXpertSuite provides programs to model linear (bio-) polymer
chemistries, simulate mass spectral data, analyse and data-mine mass.
It is the successor of GNU polyXmass, first, and then of massXpert.
.
This package ships the mineXpert program.
- msxpertsuite-minexpert-data-doc: mass spectrometry software suite - mineXpert - data and doc
msXpertSuite provides programs to model linear (bio-) polymer
chemistries, simulate mass spectral data, analyse and data-mine mass.
It is the successor of GNU polyXmass, first, and then of massXpert.
.
This package ships the data used by mineXpert and its documentation.
- msxpertsuite-minexpert-dbgsym: debug symbols for msxpertsuite-minexpert