bowtie 1.3.1-1 source package in Ubuntu
Changelog
bowtie (1.3.1-1) unstable; urgency=medium
* New upstream version
* Fix watchfile to detect new versions on github (routine-update)
* Standards-Version: 4.6.0 (routine-update)
* Update renamed lintian tag names in lintian overrides.
* Apply multi-arch hints.
+ bowtie-examples: Add Multi-Arch: foreign.
* No need to exclude files from upstream tarball any more
-- Andreas Tille <email address hidden> Tue, 14 Sep 2021 07:01:35 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any-amd64 alpha arm64 mips64el ppc64 ppc64el s390x sparc64 riscv64 all
- Section:
- science
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Mantic | release | universe | science | |
| Lunar | release | universe | science | |
| Jammy | release | universe | science |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| bowtie_1.3.1-1.dsc | 2.3 KiB | c14d55e1c2ea396c321afafd26dc96c049aae87b28f76d761a1f68b62d280b5a |
| bowtie_1.3.1.orig.tar.gz | 7.3 MiB | 147d9fe9652f7c5f351bfc0eb012e06981986fb43bd6bdfe88a95c02eabc6573 |
| bowtie_1.3.1-1.debian.tar.xz | 18.4 KiB | 68e46349a4251c8ea69e847f9427000b35b354c813c3c082dcf7a8ef2e3f9674 |
Available diffs
- diff from 1.3.0+dfsg1-1 to 1.3.1-1 (11.1 KiB)
No changes file available.
Binary packages built by this source
- bowtie: Ultrafast memory-efficient short read aligner
This package addresses the problem to interpret the results from the
latest (2010) DNA sequencing technologies. Those will yield fairly
short stretches and those cannot be interpreted directly. It is the
challenge for tools like Bowtie to give a chromosomal location to the
short stretches of DNA sequenced per run.
.
Bowtie aligns short DNA sequences (reads) to the human genome at a rate
of over 25 million 35-bp reads per hour. Bowtie indexes the genome with
a Burrows-Wheeler index to keep its memory footprint small: typically
about 2.2 GB for the human genome (2.9 GB for paired-end).
- bowtie-dbgsym: debug symbols for bowtie
- bowtie-examples: Examples for bowtie, the ultrafast memory-efficient short read aligner
This package addresses the problem to interpret the results from the
latest (2010) DNA sequencing technologies. Those will yield fairly
short stretches and those cannot be interpreted directly. It is the
challenge for tools like Bowtie to give a chromosomal location to the
short stretches of DNA sequenced per run.
.
Bowtie aligns short DNA sequences (reads) to the human genome at a rate
of over 25 million 35-bp reads per hour. Bowtie indexes the genome with
a Burrows-Wheeler index to keep its memory footprint small: typically
about 2.2 GB for the human genome (2.9 GB for paired-end).
.
This package provides some example data to work with bowtie.
