e-mem 1.0.1-5 source package in Ubuntu
Changelog
e-mem (1.0.1-5) unstable; urgency=medium [ Étienne Mollier ] * d/control: update uploader address * d/watch: fix broken link to github [ Andreas Tille ] * Standards-Version: 4.6.0 (routine-update) -- Andreas Tille <email address hidden> Sun, 22 Aug 2021 21:33:39 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| e-mem_1.0.1-5.dsc | 1.9 KiB | 4ae54451a547d4850976fef7fac2638ce709ebb390bdfd503d23e369741d3f04 |
| e-mem_1.0.1.orig.tar.gz | 33.0 KiB | 70a5a1e8b4e190d117b8629fff3493a4762708c8c0fe9eae84da918136ceafea |
| e-mem_1.0.1-5.debian.tar.xz | 5.6 KiB | 212da190651898ce8b9377bdc485b4b4322c7acf72650d361791b1a2a7e646ce |
Available diffs
- diff from 1.0.1-4 to 1.0.1-5 (810 bytes)
No changes file available.
Binary packages built by this source
- e-mem: Efficient computation of Maximal Exact Matches for very large genomes
E-MEM enables efficient computation of Maximal Exact Matches (MEMs) that
does not use full text indexes. The algorithm uses much less space and
is highly amenable to parallelization. It can compute all MEMs of
minimum length 100 between the whole human and mouse genomes on a 12
core machine in 10 min and 2 GB of memory; the required memory can be as
low as 600 MB. It can run efficiently genomes of any size. Extensive
testing and comparison with currently best algorithms is provided.
.
Mummer has many different scripts where one of the key program is MEM
computation. In all the scripts, the MEM computation program can be
replaced with e-mem with ease for better performance.
- e-mem-dbgsym: debug symbols for e-mem
