glam2 1064-9 source package in Ubuntu
Changelog
glam2 (1064-9) unstable; urgency=medium
* Standards-Version: 4.5.1 (routine-update)
* debhelper-compat 13 (routine-update)
* Secure URI in copyright format (routine-update)
* Remove trailing whitespace in debian/changelog (routine-update)
* rename debian/NEWS.Debian debian/NEWS (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Trim trailing whitespace.
* Set field Upstream-Name in debian/copyright.
* Remove obsolete field Name from debian/upstream/metadata (already present in
machine-readable debian/copyright).
-- Andreas Tille <email address hidden> Mon, 07 Dec 2020 22:07:41 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- science
- Urgency:
- Medium Urgency
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| glam2_1064-9.dsc | 2.0 KiB | f13e8842a5d54d00398f61d606a9b6d12a6c2537036a226318ba6f1c1e0d39e2 |
| glam2_1064.orig.tar.gz | 232.3 KiB | 7cdcb290792e79d984d1244940cd2f4d9f92182e4611e6c441d3c273d1f30c40 |
| glam2_1064-9.debian.tar.xz | 12.3 KiB | 15875a4056fba4c77f9fa270a61a82597b3ce834ede8204c6713cd27f7fe8901 |
Available diffs
- diff from 1064-8 to 1064-9 (2.4 KiB)
No changes file available.
Binary packages built by this source
- glam2: gapped protein motifs from unaligned sequences
GLAM2 is a software package for finding motifs in sequences, typically
amino-acid or nucleotide sequences. A motif is a re-occurring sequence
pattern: typical examples are the TATA box and the CAAX prenylation motif. The
main innovation of GLAM2 is that it allows insertions and deletions in motifs.
.
This package includes programs for discovering motifs shared by a set of
sequences and finding matches to these motifs in a sequence database, as well
as utilities for converting glam2 motifs to standard alignment formats,
masking glam2 motifs out of sequences so that weaker motifs can be found, and
removing highly similar members of a set of sequences.
.
The package includes these programs:
glam2: discovering motifs shared by a set of sequences;
glam2scan: finding matches, in a sequence database, to a motif discovered
by glam2;
glam2format: converting glam2 motifs to standard alignment formats;
glam2mask: masking glam2 motifs out of sequences, so that weaker motifs
can be found;
glam2-purge: removing highly similar members of a set of sequences.
.
In this binary package, the fast Fourier algorithm (FFT) was enabled for the
glam2 program.
- glam2-dbgsym: debug symbols for glam2
